SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    80401 2e4g:B (2.08) BS01 TRP 1.14.19.9 GO:0004497 ... Q8KHZ8 17260957
    80402 2e4h:A (-1.00) BS01 peptide ? N/A P30622 17563362
    80403 2e4n:A (1.8) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    80404 2e4p:A (2.0) BS01 GLC ? GO:0051537 ... Q52440 17850818
    80405 2e4p:A (2.0) BS02 FES ? GO:0051537 ... Q52440 17850818
    80406 2e4p:B (2.0) BS01 FES ? GO:0051537 ... Q52440 17850818
    80407 2e4q:A (1.8) BS01 FES ? GO:0051537 ... Q52440 17850818
    80408 2e4q:C (1.8) BS01 FES ? GO:0051537 ... Q52440 17850818
    80409 2e4r:A (2.2) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    80410 2e4t:A (0.96) BS01 ZN 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    80411 2e4t:A (0.96) BS02 CA 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    80412 2e4u:A (2.35) BS01 GLU ? GO:0004930 ... P31422 17360426
    80413 2e4u:B (2.35) BS01 GLU ? GO:0004930 ... P31422 17360426
    80414 2e4v:A (2.4) BS01 2CG ? GO:0004930 ... P31422 17360426 BindingDB: EC50=300nM
    80415 2e4v:B (2.4) BS01 2CG ? GO:0004930 ... P31422 17360426 BindingDB: EC50=300nM
    80416 2e4w:A (2.4) BS01 C5A ? GO:0004930 ... P31422 17360426
    80417 2e4w:B (2.4) BS01 C5A ? GO:0004930 ... P31422 17360426
    80418 2e4x:A (2.75) BS01 C5B ? GO:0004930 ... P31422 17360426 BindingDB: EC50=8000nM
    80419 2e4x:B (2.75) BS01 C5B ? GO:0004930 ... P31422 17360426 BindingDB: EC50=8000nM
    80420 2e4y:A (3.4) BS01 52A ? GO:0004930 ... P31422 17360426 BindingDB: EC50=1700nM
    80421 2e4y:B (3.4) BS01 52A ? GO:0004930 ... P31422 17360426 BindingDB: EC50=1700nM
    80422 2e50:A (2.3) BS01 GLC ? GO:0005634 ... Q01105 17360516
    80423 2e50:A (2.3) BS02 GLC ? GO:0005634 ... Q01105 17360516
    80424 2e50:B (2.3) BS01 GLC ? GO:0005634 ... Q01105 17360516
    80425 2e50:P (2.3) BS01 GLC ? GO:0005634 ... Q01105 17360516
    80426 2e50:P (2.3) BS02 GLC ? GO:0005634 ... Q01105 17360516
    80427 2e50:P (2.3) BS03 GLC ? GO:0005634 ... Q01105 17360516
    80428 2e50:Q (2.3) BS01 GLC ? GO:0005634 ... Q01105 17360516
    80429 2e51:A (2.5) BS01 MN ? GO:0030246 ... O24313 17510954
    80430 2e51:A (2.5) BS02 CA ? GO:0030246 ... O24313 17510954
    80431 2e51:B (2.5) BS01 MN ? GO:0030246 ... O24313 17510954
    80432 2e51:B (2.5) BS02 CA ? GO:0030246 ... O24313 17510954
    80433 2e51:C (2.5) BS01 MN ? GO:0030246 ... O24313 17510954
    80434 2e51:C (2.5) BS02 CA ? GO:0030246 ... O24313 17510954
    80435 2e51:D (2.5) BS01 MN ? GO:0030246 ... O24313 17510954
    80436 2e51:D (2.5) BS02 CA ? GO:0030246 ... O24313 17510954
    80437 2e52:A (2.0) BS01 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80438 2e52:A (2.0) BS02 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80439 2e52:A (2.0) BS03 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80440 2e52:A (2.0) BS04 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80441 2e52:B (2.0) BS01 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80442 2e52:B (2.0) BS02 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80443 2e52:C (2.0) BS01 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80444 2e52:C (2.0) BS02 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80445 2e52:D (2.0) BS01 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80446 2e52:D (2.0) BS02 dna 3.1.21.4 GO:0009036 ... P43870 19966419
    80447 2e53:A (2.4) BS01 GLA ? GO:0030246 ... O24313 17510954
    80448 2e53:A (2.4) BS02 CA ? GO:0030246 ... O24313 17510954
    80449 2e53:A (2.4) BS03 MN ? GO:0030246 ... O24313 17510954
    80450 2e53:B (2.4) BS01 GLA ? GO:0030246 ... O24313 17510954
    80451 2e53:B (2.4) BS02 CA ? GO:0030246 ... O24313 17510954
    80452 2e53:B (2.4) BS03 MN ? GO:0030246 ... O24313 17510954
    80453 2e53:C (2.4) BS01 GLA ? GO:0030246 ... O24313 17510954
    80454 2e53:C (2.4) BS02 CA ? GO:0030246 ... O24313 17510954
    80455 2e53:C (2.4) BS03 MN ? GO:0030246 ... O24313 17510954
    80456 2e53:D (2.4) BS01 GLA ? GO:0030246 ... O24313 17510954
    80457 2e53:D (2.4) BS02 CA ? GO:0030246 ... O24313 17510954
    80458 2e53:D (2.4) BS03 MN ? GO:0030246 ... O24313 17510954
    80459 2e54:A (1.5) BS01 PLP 2.6.1.11 GO:0003992 ... Q9X2A5 N/A
    80460 2e59:A (2.21) BS01 LP5 ? GO:0001530 ... Q9Y6Y9 17569869
    80461 2e59:A (2.21) BS02 LP4 ? GO:0001530 ... Q9Y6Y9 17569869
    80462 2e5a:A (2.1) BS01 MG 2.3.1.-
    2.3.1.200
    GO:0005737 ... O46419 17570395
    80463 2e5a:A (2.1) BS02 PO4 2.3.1.-
    2.3.1.200
    GO:0005737 ... O46419 17570395
    80464 2e5a:A (2.1) BS03 LAQ 2.3.1.-
    2.3.1.200
    GO:0005737 ... O46419 17570395
    80465 2e5c:A (2.2) BS01 PRP 2.4.2.12 GO:0005125 ... P43490 19819904
    80466 2e5c:A (2.2) BS02 PRP 2.4.2.12 GO:0005125 ... P43490 19819904
    80467 2e5c:B (2.2) BS01 PRP 2.4.2.12 GO:0005125 ... P43490 19819904
    80468 2e5c:B (2.2) BS02 PRP 2.4.2.12 GO:0005125 ... P43490 19819904
    80469 2e5d:A (2.0) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 19819904
    80470 2e5d:A (2.0) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 19819904
    80471 2e5d:B (2.0) BS01 NCA 2.4.2.12 GO:0005125 ... P43490 19819904
    80472 2e5d:B (2.0) BS02 NCA 2.4.2.12 GO:0005125 ... P43490 19819904
    80473 2e5l:B (3.3) BS01 rna ? GO:0003735 ... P80371 17355865
    80474 2e5l:C (3.3) BS01 rna ? GO:0003676 ... P80372 17355865
    80475 2e5l:D (3.3) BS01 rna ? GO:0003723 ... P80373 17355865
    80476 2e5l:D (3.3) BS02 ZN ? GO:0003723 ... P80373 17355865
    80477 2e5l:E (3.3) BS01 rna ? GO:0003723 ... Q5SHQ5 17355865
    80478 2e5l:F (3.3) BS01 rna ? GO:0003735 ... Q5SLP8 17355865
    80479 2e5l:G (3.3) BS01 rna ? GO:0000049 ... P17291 17355865
    80480 2e5l:H (3.3) BS01 rna ? GO:0003735 ... P0DOY9 17355865
    80481 2e5l:I (3.3) BS01 rna ? GO:0003723 ... P80374 17355865
    80482 2e5l:J (3.3) BS01 rna ? GO:0000049 ... Q5SHN7 17355865
    80483 2e5l:K (3.3) BS01 rna ? GO:0003735 ... P80376 17355865
    80484 2e5l:L (3.3) BS01 rna ? GO:0000049 ... Q5SHN3 17355865
    80485 2e5l:M (3.3) BS01 rna ? GO:0000049 ... P80377 17355865
    80486 2e5l:N (3.3) BS01 rna ? GO:0003735 ... P0DOY6 17355865
    80487 2e5l:N (3.3) BS02 ZN ? GO:0003735 ... P0DOY6 17355865
    80488 2e5l:O (3.3) BS01 rna ? GO:0003735 ... Q5SJ76 17355865
    80489 2e5l:P (3.3) BS01 rna ? GO:0003735 ... Q5SJH3 17355865
    80490 2e5l:Q (3.3) BS01 rna ? GO:0003735 ... P0DOY7 17355865
    80491 2e5l:R (3.3) BS01 rna ? GO:0003735 ... Q5SLQ0 17355865
    80492 2e5l:S (3.3) BS01 rna ? GO:0000028 ... Q5SHP2 17355865
    80493 2e5l:T (3.3) BS01 rna ? GO:0003723 ... P80380 17355865
    80494 2e5m:A (2.4) BS01 NAP 1.1.1.42 GO:0004450 ... Q96YK6 30662370
    80495 2e5m:B (2.4) BS01 NAP 1.1.1.42 GO:0004450 ... Q96YK6 30662370
    80496 2e5r:A (-1.00) BS01 ZN ? GO:0008270 ... Q9Y4J8 N/A
    80497 2e5r:A (-1.00) BS02 ZN ? GO:0008270 ... Q9Y4J8 N/A
    80498 2e5s:A (-1.00) BS01 ZN ? GO:0046872 ... Q5VZF2 19177353
    80499 2e5s:A (-1.00) BS02 ZN ? GO:0046872 ... Q5VZF2 19177353
    80500 2e5v:A (2.09) BS01 FAD 1.4.3.16 GO:0005737 ... Q972D2 18226609
    80501 2e5v:B (2.09) BS01 FAD 1.4.3.16 GO:0005737 ... Q972D2 18226609
    80502 2e5w:A (2.0) BS01 AG3 2.5.1.16 GO:0003824 ... O57950 N/A
    80503 2e5w:A (2.0) BS02 MTA 2.5.1.16 GO:0003824 ... O57950 N/A
    80504 2e5w:C (2.0) BS01 AG3 2.5.1.16 GO:0003824 ... O57950 N/A
    80505 2e5w:C (2.0) BS02 MTA 2.5.1.16 GO:0003824 ... O57950 N/A
    80506 2e5x:A (2.0) BS01 ITT 3.6.1.66 GO:0005737 ... O59580 N/A
    80507 2e5y:A (1.92) BS01 ATP 3.6.3.14 GO:0015986 ... P07678 17581881 MOAD: Kd=22mM
    80508 2e5y:B (1.92) BS01 ATP 3.6.3.14 GO:0015986 ... P07678 17581881 MOAD: Kd=22mM
    80509 2e61:A (-1.00) BS01 ZN ? GO:0008270 ... Q9H0M4 20826339
    80510 2e67:A (2.9) BS01 MG 3.5.1.- GO:0000287 ... Q53WD3 18177738
    80511 2e67:B (2.9) BS01 MG 3.5.1.- GO:0000287 ... Q53WD3 18177738
    80512 2e67:C (2.9) BS01 MG 3.5.1.- GO:0000287 ... Q53WD3 18177738
    80513 2e67:D (2.9) BS01 MG 3.5.1.- GO:0000287 ... Q53WD3 18177738
    80514 2e67:E (2.9) BS01 MG 3.5.1.- GO:0000287 ... Q53WD3 18177738
    80515 2e67:F (2.9) BS01 MG 3.5.1.- GO:0000287 ... Q53WD3 18177738
    80516 2e68:A (1.38) BS01 FMN 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80517 2e68:A (1.38) BS02 DOR 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80518 2e68:B (1.38) BS01 FMN 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80519 2e68:B (1.38) BS02 DOR 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80520 2e6a:A (1.64) BS01 FMN 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80521 2e6a:B (1.64) BS01 FMN 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80522 2e6b:A (2.5) BS01 MG 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80523 2e6b:A (2.5) BS02 WO4 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80524 2e6b:B (2.5) BS01 MG 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80525 2e6b:B (2.5) BS02 WO4 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80526 2e6b:C (2.5) BS01 MG 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80527 2e6b:C (2.5) BS02 WO4 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80528 2e6b:D (2.5) BS01 MG 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80529 2e6b:D (2.5) BS02 WO4 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80530 2e6c:A (2.05) BS01 MN 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80531 2e6c:B (2.05) BS01 MN 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80532 2e6c:C (2.05) BS01 MN 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80533 2e6c:D (2.05) BS01 MN 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80534 2e6d:A (1.94) BS01 FMN 1.3.98.1 GO:0004152 ... Q4D3W2 18808149
    80535 2e6d:A (1.94) BS02 FUM 1.3.98.1 GO:0004152 ... Q4D3W2 18808149
    80536 2e6d:B (1.94) BS01 FMN 1.3.98.1 GO:0004152 ... Q4D3W2 18808149
    80537 2e6d:B (1.94) BS02 FUM 1.3.98.1 GO:0004152 ... Q4D3W2 18808149
    80538 2e6f:A (1.26) BS01 FMN 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80539 2e6f:A (1.26) BS02 OXC 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80540 2e6f:B (1.26) BS01 FMN 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80541 2e6f:B (1.26) BS02 OXC 1.3.98.1 GO:0004152 ... Q4D3W2 N/A
    80542 2e6h:A (2.1) BS01 MN 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80543 2e6h:B (2.1) BS01 MN 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80544 2e6h:C (2.1) BS01 MN 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80545 2e6h:D (2.1) BS01 MN 3.1.3.5 GO:0004309 ... Q53W92 17561111
    80546 2e6i:A (-1.00) BS01 ZN 2.7.10.2 GO:0035556 ... Q08881 N/A
    80547 2e6l:A (2.2) BS01 ZN 3.1.-.-
    5.6.2.4
    GO:0003676 ... O09053 N/A
    80548 2e6r:A (-1.00) BS01 ZN 1.14.11.67 N/A Q9BY66 N/A
    80549 2e6r:A (-1.00) BS02 ZN 1.14.11.67 N/A Q9BY66 N/A
    80550 2e6s:A (-1.00) BS01 ZN 2.3.2.27 N/A Q96PU4 N/A
    80551 2e6s:A (-1.00) BS02 ZN 2.3.2.27 N/A Q96PU4 N/A
    80552 2e6s:A (-1.00) BS03 ZN 2.3.2.27 N/A Q96PU4 N/A
    80553 2e6u:X (1.8) BS01 CA ? N/A O58836 16041065
    80554 2e6u:X (1.8) BS02 COA ? N/A O58836 16041065
    80555 2e6v:A (2.5) BS01 BMA ? GO:0016020 ... P49256 17652092
    80556 2e6v:A (2.5) BS02 MAN ? GO:0016020 ... P49256 17652092
    80557 2e6v:A (2.5) BS03 MAN ? GO:0016020 ... P49256 17652092
    80558 2e6v:A (2.5) BS04 CA ? GO:0016020 ... P49256 17652092
    80559 2e6v:B (2.5) BS01 MAN ? GO:0016020 ... P49256 17652092
    80560 2e6v:B (2.5) BS02 MAN ? GO:0016020 ... P49256 17652092
    80561 2e6v:B (2.5) BS03 CA ? GO:0016020 ... P49256 17652092
    80562 2e6v:C (2.5) BS01 MAN ? GO:0016020 ... P49256 17652092
    80563 2e6v:C (2.5) BS02 CA ? GO:0016020 ... P49256 17652092
    80564 2e6v:D (2.5) BS01 CA ? GO:0016020 ... P49256 17652092
    80565 2e6v:E (2.5) BS01 CA ? GO:0016020 ... P49256 17652092
    80566 2e6w:A (-1.00) BS01 CA ? GO:0005509 ... Q9Y2W7 17962406
    80567 2e6w:A (-1.00) BS02 CA ? GO:0005509 ... Q9Y2W7 17962406
    80568 2e6y:A (1.6) BS01 U5P 4.1.1.23 GO:0004590 ... O26232 17290979
    80569 2e6y:A (1.6) BS02 U5P 4.1.1.23 GO:0004590 ... O26232 17290979
    80570 2e6y:B (1.6) BS01 U5P 4.1.1.23 GO:0004590 ... O26232 17290979
    80571 2e6y:B (1.6) BS02 U5P 4.1.1.23 GO:0004590 ... O26232 17290979
    80572 2e72:A (-1.00) BS01 ZN ? N/A Q7Z3K3 N/A
    80573 2e73:A (-1.00) BS01 ZN 2.7.11.13 N/A P05129 N/A
    80574 2e73:A (-1.00) BS02 ZN 2.7.11.13 N/A P05129 N/A
    80575 2e74:A (3.0) BS01 peptide ? GO:0009055 ... P83791 17498743
    80576 2e74:A (3.0) BS02 HEM ? GO:0009055 ... P83791 17498743
    80577 2e74:A (3.0) BS03 HEM ? GO:0009055 ... P83791 17498743
    80578 2e74:A (3.0) BS04 HEM ? GO:0009055 ... P83791 17498743
    80579 2e74:B (3.0) BS01 peptide ? GO:0008121 ... P83792 17498743
    80580 2e74:B (3.0) BS02 HEM ? GO:0008121 ... P83792 17498743
    80581 2e74:B (3.0) BS03 CLA ? GO:0008121 ... P83792 17498743
    80582 2e74:C (3.0) BS01 peptide ? GO:0005506 ... P83793 17498743
    80583 2e74:C (3.0) BS02 HEM ? GO:0005506 ... P83793 17498743
    80584 2e74:D (3.0) BS01 FES 7.1.1.6 GO:0004497 ... P83794 17498743
    80585 2e74:E (3.0) BS01 peptide ? GO:0009055 ... P83795 17498743
    80586 2e74:F (3.0) BS01 peptide ? GO:0009055 ... P83796 17498743
    80587 2e75:A (3.55) BS01 HEM ? GO:0009055 ... P83791 17498743
    80588 2e75:A (3.55) BS02 HEM ? GO:0009055 ... P83791 17498743
    80589 2e75:A (3.55) BS03 HEM ? GO:0009055 ... P83791 17498743
    80590 2e75:A (3.55) BS04 QNO ? GO:0009055 ... P83791 17498743
    80591 2e75:A (3.55) BS05 CLA ? GO:0009055 ... P83791 17498743
    80592 2e75:B (3.55) BS01 peptide ? GO:0008121 ... P83792 17498743
    80593 2e75:B (3.55) BS02 HEM ? GO:0008121 ... P83792 17498743
    80594 2e75:B (3.55) BS03 QNO ? GO:0008121 ... P83792 17498743
    80595 2e75:B (3.55) BS04 CLA ? GO:0008121 ... P83792 17498743
    80596 2e75:C (3.55) BS01 peptide ? GO:0005506 ... P83793 17498743
    80597 2e75:C (3.55) BS02 HEM ? GO:0005506 ... P83793 17498743
    80598 2e75:D (3.55) BS01 FES 7.1.1.6 GO:0004497 ... P83794 17498743
    80599 2e75:E (3.55) BS01 peptide ? GO:0009055 ... P83795 17498743
    80600 2e75:F (3.55) BS01 peptide ? GO:0009055 ... P83796 17498743

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).