SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    805801 8flb:SV (2.55) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805802 8flb:VB (2.55) BS01 rna ? N/A Q9UNZ5 37410842
    805803 8flc:BA (2.76) BS01 rna ? GO:0002181 ... P30050 37410842
    805804 8flc:L5 (2.76) BS01 rna ? GO:0000027 ... P62913 37410842
    805805 8flc:L5 (2.76) BS02 rna ? GO:0000027 ... P62913 37410842
    805806 8flc:L6 (2.76) BS01 rna ? GO:0001824 ... P26373 37410842
    805807 8flc:L6 (2.76) BS02 rna ? GO:0001824 ... P26373 37410842
    805808 8flc:L7 (2.76) BS01 rna ? GO:0002181 ... P40429 37410842
    805809 8flc:L8 (2.76) BS01 rna ? GO:0002181 ... P50914 37410842
    805810 8flc:L9 (2.76) BS01 rna ? GO:0002181 ... P61313 37410842
    805811 8flc:L9 (2.76) BS02 rna ? GO:0002181 ... P61313 37410842
    805812 8flc:LA (2.76) BS01 rna ? GO:0002181 ... P18621 37410842
    805813 8flc:LA (2.76) BS02 rna ? GO:0002181 ... P18621 37410842
    805814 8flc:LB (2.76) BS01 rna ? GO:0002181 ... Q07020 37410842
    805815 8flc:LC (2.76) BS01 rna ? GO:0002181 ... Q02543 37410842
    805816 8flc:LC (2.76) BS02 rna ? GO:0002181 ... Q02543 37410842
    805817 8flc:LD (2.76) BS01 rna ? GO:0002181 ... P84098 37410842
    805818 8flc:LE (2.76) BS01 rna ? GO:0002181 ... P46778 37410842
    805819 8flc:LE (2.76) BS02 rna ? GO:0002181 ... P46778 37410842
    805820 8flc:LF (2.76) BS01 rna ? GO:0002181 ... P35268 37410842
    805821 8flc:LG (2.76) BS01 rna ? GO:0000122 ... P62829 37410842
    805822 8flc:LH (2.76) BS01 rna ? GO:0002181 ... P62750 37410842
    805823 8flc:LH (2.76) BS02 rna ? GO:0002181 ... P62750 37410842
    805824 8flc:LI (2.76) BS01 rna ? GO:0002181 ... P61254 37410842
    805825 8flc:LI (2.76) BS02 rna ? GO:0002181 ... P61254 37410842
    805826 8flc:LJ (2.76) BS01 rna ? GO:0002181 ... P61353 37410842
    805827 8flc:LK (2.76) BS01 rna ? GO:0002181 ... P46776 37410842
    805828 8flc:LL (2.76) BS01 rna ? GO:0002181 ... P46779 37410842
    805829 8flc:LM (2.76) BS01 rna ? GO:0002181 ... P47914 37410842
    805830 8flc:LN (2.76) BS01 rna ? GO:0002181 ... P39023 37410842
    805831 8flc:LO (2.76) BS01 rna ? GO:0002181 ... P62888 37410842
    805832 8flc:LP (2.76) BS01 rna ? GO:0002181 ... P62899 37410842
    805833 8flc:LQ (2.76) BS01 rna ? GO:0002181 ... P62910 37410842
    805834 8flc:LQ (2.76) BS02 MG ? GO:0002181 ... P62910 37410842
    805835 8flc:LR (2.76) BS01 rna ? GO:0002181 ... P49207 37410842
    805836 8flc:LR (2.76) BS02 MG ? GO:0002181 ... P49207 37410842
    805837 8flc:LR (2.76) BS03 ZN ? GO:0002181 ... P49207 37410842
    805838 8flc:LS (2.76) BS01 rna ? GO:0000463 ... P42766 37410842
    805839 8flc:LS (2.76) BS02 rna ? GO:0000463 ... P42766 37410842
    805840 8flc:LT (2.76) BS01 rna ? GO:0000049 ... P18077 37410842
    805841 8flc:LT (2.76) BS02 MG ? GO:0000049 ... P18077 37410842
    805842 8flc:LU (2.76) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805843 8flc:LV (2.76) BS01 rna ? GO:0002181 ... P83881 37410842
    805844 8flc:LV (2.76) BS02 ZN ? GO:0002181 ... P83881 37410842
    805845 8flc:LW (2.76) BS01 rna ? GO:0002181 ... P61927 37410842
    805846 8flc:LW (2.76) BS02 rna ? GO:0002181 ... P61927 37410842
    805847 8flc:LW (2.76) BS03 ZN ? GO:0002181 ... P61927 37410842
    805848 8flc:LX (2.76) BS01 rna ? GO:0002181 ... P61513 37410842
    805849 8flc:LX (2.76) BS02 ZN ? GO:0002181 ... P61513 37410842
    805850 8flc:LY (2.76) BS01 rna ? GO:0001501 ... P63173 37410842
    805851 8flc:LZ (2.76) BS01 rna ? GO:0002181 ... P62891 37410842
    805852 8flc:LZ (2.76) BS02 rna ? GO:0002181 ... P62891 37410842
    805853 8flc:NK (2.76) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805854 8flc:NP (2.76) BS01 rna ? GO:0003676 ... O00488 37410842
    805855 8flc:NP (2.76) BS02 ZN ? GO:0003676 ... O00488 37410842
    805856 8flc:NR (2.76) BS01 rna ? GO:0005515 ... Q96EY4 37410842
    805857 8flc:NR (2.76) BS02 rna ? GO:0005515 ... Q96EY4 37410842
    805858 8flc:SA (2.76) BS01 rna ? GO:0002181 ... P36578 37410842
    805859 8flc:SA (2.76) BS02 rna ? GO:0002181 ... P36578 37410842
    805860 8flc:SB (2.76) BS01 rna ? GO:0000027 ... P46777 37410842
    805861 8flc:SB (2.76) BS02 rna ? GO:0000027 ... P46777 37410842
    805862 8flc:SC (2.76) BS01 rna ? GO:0002181 ... Q02878 37410842
    805863 8flc:SD (2.76) BS01 rna ? GO:0000463 ... P18124 37410842
    805864 8flc:SD (2.76) BS02 rna ? GO:0000463 ... P18124 37410842
    805865 8flc:SE (2.76) BS01 rna ? GO:0000470 ... P62424 37410842
    805866 8flc:SE (2.76) BS02 rna ? GO:0000470 ... P62424 37410842
    805867 8flc:SF (2.76) BS01 rna ? GO:0002181 ... P62917 37410842
    805868 8flc:SF (2.76) BS02 MG ? GO:0002181 ... P62917 37410842
    805869 8flc:SG (2.76) BS01 rna ? GO:0002181 ... P32969 37410842
    805870 8flc:SK (2.76) BS01 rna ? GO:0000054 ... P56537 37410842
    805871 8flc:SQ (2.76) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805872 8flc:SR (2.76) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805873 8flc:SR (2.76) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805874 8flc:SR (2.76) BS03 GDP ? GO:0000079 ... Q9BZE4 37410842
    805875 8flc:SV (2.76) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805876 8flc:SV (2.76) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805877 8flc:VB (2.76) BS01 rna ? N/A Q9UNZ5 37410842
    805878 8fld:BE (2.58) BS01 rna ? GO:0000122 ... P27635 37410842
    805879 8fld:BE (2.58) BS02 rna ? GO:0000122 ... P27635 37410842
    805880 8fld:L5 (2.58) BS01 rna ? GO:0000027 ... P62913 37410842
    805881 8fld:L5 (2.58) BS02 rna ? GO:0000027 ... P62913 37410842
    805882 8fld:L6 (2.58) BS01 rna ? GO:0001824 ... P26373 37410842
    805883 8fld:L6 (2.58) BS02 rna ? GO:0001824 ... P26373 37410842
    805884 8fld:L7 (2.58) BS01 rna ? GO:0002181 ... P40429 37410842
    805885 8fld:L8 (2.58) BS01 rna ? GO:0002181 ... P50914 37410842
    805886 8fld:L9 (2.58) BS01 rna ? GO:0002181 ... P61313 37410842
    805887 8fld:L9 (2.58) BS02 rna ? GO:0002181 ... P61313 37410842
    805888 8fld:LA (2.58) BS01 rna ? GO:0002181 ... P18621 37410842
    805889 8fld:LA (2.58) BS02 rna ? GO:0002181 ... P18621 37410842
    805890 8fld:LB (2.58) BS01 rna ? GO:0002181 ... Q07020 37410842
    805891 8fld:LC (2.58) BS01 rna ? GO:0002181 ... Q02543 37410842
    805892 8fld:LC (2.58) BS02 rna ? GO:0002181 ... Q02543 37410842
    805893 8fld:LD (2.58) BS01 rna ? GO:0002181 ... P84098 37410842
    805894 8fld:LE (2.58) BS01 rna ? GO:0002181 ... P46778 37410842
    805895 8fld:LE (2.58) BS02 rna ? GO:0002181 ... P46778 37410842
    805896 8fld:LF (2.58) BS01 rna ? GO:0002181 ... P35268 37410842
    805897 8fld:LG (2.58) BS01 rna ? GO:0000122 ... P62829 37410842
    805898 8fld:LH (2.58) BS01 rna ? GO:0002181 ... P62750 37410842
    805899 8fld:LH (2.58) BS02 rna ? GO:0002181 ... P62750 37410842
    805900 8fld:LI (2.58) BS01 rna ? GO:0002181 ... P61254 37410842
    805901 8fld:LI (2.58) BS02 rna ? GO:0002181 ... P61254 37410842
    805902 8fld:LJ (2.58) BS01 rna ? GO:0002181 ... P61353 37410842
    805903 8fld:LK (2.58) BS01 rna ? GO:0002181 ... P46776 37410842
    805904 8fld:LL (2.58) BS01 rna ? GO:0002181 ... P46779 37410842
    805905 8fld:LM (2.58) BS01 rna ? GO:0002181 ... P47914 37410842
    805906 8fld:LN (2.58) BS01 rna ? GO:0002181 ... P39023 37410842
    805907 8fld:LO (2.58) BS01 rna ? GO:0002181 ... P62888 37410842
    805908 8fld:LP (2.58) BS01 rna ? GO:0002181 ... P62899 37410842
    805909 8fld:LQ (2.58) BS01 rna ? GO:0002181 ... P62910 37410842
    805910 8fld:LQ (2.58) BS02 MG ? GO:0002181 ... P62910 37410842
    805911 8fld:LR (2.58) BS01 rna ? GO:0002181 ... P49207 37410842
    805912 8fld:LR (2.58) BS02 ZN ? GO:0002181 ... P49207 37410842
    805913 8fld:LS (2.58) BS01 rna ? GO:0000463 ... P42766 37410842
    805914 8fld:LS (2.58) BS02 rna ? GO:0000463 ... P42766 37410842
    805915 8fld:LT (2.58) BS01 rna ? GO:0000049 ... P18077 37410842
    805916 8fld:LT (2.58) BS02 MG ? GO:0000049 ... P18077 37410842
    805917 8fld:LU (2.58) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805918 8fld:LV (2.58) BS01 rna ? GO:0002181 ... P83881 37410842
    805919 8fld:LV (2.58) BS02 ZN ? GO:0002181 ... P83881 37410842
    805920 8fld:LW (2.58) BS01 rna ? GO:0002181 ... P61927 37410842
    805921 8fld:LW (2.58) BS02 rna ? GO:0002181 ... P61927 37410842
    805922 8fld:LW (2.58) BS03 ZN ? GO:0002181 ... P61927 37410842
    805923 8fld:LX (2.58) BS01 rna ? GO:0002181 ... P61513 37410842
    805924 8fld:LX (2.58) BS02 ZN ? GO:0002181 ... P61513 37410842
    805925 8fld:LY (2.58) BS01 rna ? GO:0001501 ... P63173 37410842
    805926 8fld:LZ (2.58) BS01 rna ? GO:0002181 ... P62891 37410842
    805927 8fld:LZ (2.58) BS02 rna ? GO:0002181 ... P62891 37410842
    805928 8fld:NK (2.58) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    805929 8fld:NL (2.58) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    805930 8fld:NP (2.58) BS01 rna ? GO:0003676 ... O00488 37410842
    805931 8fld:NP (2.58) BS02 ZN ? GO:0003676 ... O00488 37410842
    805932 8fld:SA (2.58) BS01 rna ? GO:0002181 ... P36578 37410842
    805933 8fld:SA (2.58) BS02 rna ? GO:0002181 ... P36578 37410842
    805934 8fld:SB (2.58) BS01 rna ? GO:0000027 ... P46777 37410842
    805935 8fld:SB (2.58) BS02 rna ? GO:0000027 ... P46777 37410842
    805936 8fld:SC (2.58) BS01 rna ? GO:0002181 ... Q02878 37410842
    805937 8fld:SD (2.58) BS01 rna ? GO:0000463 ... P18124 37410842
    805938 8fld:SD (2.58) BS02 rna ? GO:0000463 ... P18124 37410842
    805939 8fld:SE (2.58) BS01 rna ? GO:0000470 ... P62424 37410842
    805940 8fld:SE (2.58) BS02 rna ? GO:0000470 ... P62424 37410842
    805941 8fld:SF (2.58) BS01 rna ? GO:0002181 ... P62917 37410842
    805942 8fld:SF (2.58) BS02 MG ? GO:0002181 ... P62917 37410842
    805943 8fld:SG (2.58) BS01 rna ? GO:0002181 ... P32969 37410842
    805944 8fld:SH (2.58) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    805945 8fld:SI (2.58) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    805946 8fld:SI (2.58) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    805947 8fld:SI (2.58) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    805948 8fld:SK (2.58) BS01 rna ? GO:0000054 ... P56537 37410842
    805949 8fld:SL (2.58) BS01 rna ? GO:0001649 ... O76021 37410842
    805950 8fld:SM (2.58) BS01 rna ? GO:0000463 ... O00541 37410842
    805951 8fld:SM (2.58) BS02 rna ? GO:0000463 ... O00541 37410842
    805952 8fld:SQ (2.58) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    805953 8fld:SR (2.58) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    805954 8fld:SR (2.58) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    805955 8fld:SV (2.58) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    805956 8fld:SV (2.58) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    805957 8fle:BE (2.48) BS01 rna ? GO:0000122 ... P27635 37410842
    805958 8fle:BE (2.48) BS02 rna ? GO:0000122 ... P27635 37410842
    805959 8fle:L5 (2.48) BS01 rna ? GO:0000027 ... P62913 37410842
    805960 8fle:L5 (2.48) BS02 rna ? GO:0000027 ... P62913 37410842
    805961 8fle:L6 (2.48) BS01 rna ? GO:0001824 ... P26373 37410842
    805962 8fle:L6 (2.48) BS02 rna ? GO:0001824 ... P26373 37410842
    805963 8fle:L7 (2.48) BS01 rna ? GO:0002181 ... P40429 37410842
    805964 8fle:L8 (2.48) BS01 rna ? GO:0002181 ... P50914 37410842
    805965 8fle:L9 (2.48) BS01 rna ? GO:0002181 ... P61313 37410842
    805966 8fle:L9 (2.48) BS02 rna ? GO:0002181 ... P61313 37410842
    805967 8fle:LA (2.48) BS01 rna ? GO:0002181 ... P18621 37410842
    805968 8fle:LA (2.48) BS02 rna ? GO:0002181 ... P18621 37410842
    805969 8fle:LB (2.48) BS01 rna ? GO:0002181 ... Q07020 37410842
    805970 8fle:LC (2.48) BS01 rna ? GO:0002181 ... Q02543 37410842
    805971 8fle:LC (2.48) BS02 rna ? GO:0002181 ... Q02543 37410842
    805972 8fle:LD (2.48) BS01 rna ? GO:0002181 ... P84098 37410842
    805973 8fle:LE (2.48) BS01 rna ? GO:0002181 ... P46778 37410842
    805974 8fle:LE (2.48) BS02 rna ? GO:0002181 ... P46778 37410842
    805975 8fle:LF (2.48) BS01 rna ? GO:0002181 ... P35268 37410842
    805976 8fle:LG (2.48) BS01 rna ? GO:0000122 ... P62829 37410842
    805977 8fle:LH (2.48) BS01 rna ? GO:0002181 ... P62750 37410842
    805978 8fle:LH (2.48) BS02 rna ? GO:0002181 ... P62750 37410842
    805979 8fle:LI (2.48) BS01 rna ? GO:0002181 ... P61254 37410842
    805980 8fle:LI (2.48) BS02 rna ? GO:0002181 ... P61254 37410842
    805981 8fle:LJ (2.48) BS01 rna ? GO:0002181 ... P61353 37410842
    805982 8fle:LK (2.48) BS01 rna ? GO:0002181 ... P46776 37410842
    805983 8fle:LL (2.48) BS01 rna ? GO:0002181 ... P46779 37410842
    805984 8fle:LM (2.48) BS01 rna ? GO:0002181 ... P47914 37410842
    805985 8fle:LN (2.48) BS01 rna ? GO:0002181 ... P39023 37410842
    805986 8fle:LO (2.48) BS01 rna ? GO:0002181 ... P62888 37410842
    805987 8fle:LP (2.48) BS01 rna ? GO:0002181 ... P62899 37410842
    805988 8fle:LQ (2.48) BS01 rna ? GO:0002181 ... P62910 37410842
    805989 8fle:LQ (2.48) BS02 MG ? GO:0002181 ... P62910 37410842
    805990 8fle:LR (2.48) BS01 rna ? GO:0002181 ... P49207 37410842
    805991 8fle:LR (2.48) BS02 MG ? GO:0002181 ... P49207 37410842
    805992 8fle:LR (2.48) BS03 ZN ? GO:0002181 ... P49207 37410842
    805993 8fle:LS (2.48) BS01 rna ? GO:0000463 ... P42766 37410842
    805994 8fle:LS (2.48) BS02 rna ? GO:0000463 ... P42766 37410842
    805995 8fle:LT (2.48) BS01 rna ? GO:0000049 ... P18077 37410842
    805996 8fle:LT (2.48) BS02 MG ? GO:0000049 ... P18077 37410842
    805997 8fle:LU (2.48) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    805998 8fle:LV (2.48) BS01 rna ? GO:0002181 ... P83881 37410842
    805999 8fle:LV (2.48) BS02 ZN ? GO:0002181 ... P83881 37410842
    806000 8fle:LW (2.48) BS01 rna ? GO:0002181 ... P61927 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).