SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    805801 8fc2:10 (2.5) BS02 rna ? GO:0003735 ... P60493 37452045
    805802 8fc2:10 (2.5) BS03 MG ? GO:0003735 ... P60493 37452045
    805803 8fc2:10 (2.5) BS04 MG ? GO:0003735 ... P60493 37452045
    805804 8fc2:11 (2.5) BS01 rna ? GO:0003735 ... P60494 37452045
    805805 8fc2:11 (2.5) BS02 MG ? GO:0003735 ... P60494 37452045
    805806 8fc2:12 (2.5) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    805807 8fc2:13 (2.5) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    805808 8fc2:13 (2.5) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    805809 8fc2:13 (2.5) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    805810 8fc2:13 (2.5) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    805811 8fc2:14 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    805812 8fc2:14 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    805813 8fc2:15 (2.5) BS01 rna ? GO:0003735 ... P80339 37452045
    805814 8fc2:15 (2.5) BS02 MG ? GO:0003735 ... P80339 37452045
    805815 8fc2:15 (2.5) BS03 MG ? GO:0003735 ... P80339 37452045
    805816 8fc2:15 (2.5) BS04 ZN ? GO:0003735 ... P80339 37452045
    805817 8fc2:16 (2.5) BS01 rna ? GO:0003735 ... P35871 37452045
    805818 8fc2:16 (2.5) BS02 ZN ? GO:0003735 ... P35871 37452045
    805819 8fc2:17 (2.5) BS01 rna ? GO:0003735 ... P80340 37452045
    805820 8fc2:17 (2.5) BS02 MG ? GO:0003735 ... P80340 37452045
    805821 8fc2:17 (2.5) BS03 MG ? GO:0003735 ... P80340 37452045
    805822 8fc2:17 (2.5) BS04 MG ? GO:0003735 ... P80340 37452045
    805823 8fc2:18 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    805824 8fc2:18 (2.5) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    805825 8fc2:18 (2.5) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    805826 8fc2:19 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    805827 8fc2:19 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    805828 8fc2:1D (2.5) BS01 rna ? GO:0002181 ... P60405 37452045
    805829 8fc2:1D (2.5) BS02 rna ? GO:0002181 ... P60405 37452045
    805830 8fc2:1D (2.5) BS03 MG ? GO:0002181 ... P60405 37452045
    805831 8fc2:1D (2.5) BS04 MG ? GO:0002181 ... P60405 37452045
    805832 8fc2:1D (2.5) BS05 MG ? GO:0002181 ... P60405 37452045
    805833 8fc2:1D (2.5) BS06 MG ? GO:0002181 ... P60405 37452045
    805834 8fc2:1D (2.5) BS07 MG ? GO:0002181 ... P60405 37452045
    805835 8fc2:1D (2.5) BS08 MG ? GO:0002181 ... P60405 37452045
    805836 8fc2:1D (2.5) BS09 MG ? GO:0002181 ... P60405 37452045
    805837 8fc2:1D (2.5) BS10 MG ? GO:0002181 ... P60405 37452045
    805838 8fc2:1D (2.5) BS11 MG ? GO:0002181 ... P60405 37452045
    805839 8fc2:1D (2.5) BS12 MG ? GO:0002181 ... P60405 37452045
    805840 8fc2:1E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    805841 8fc2:1E (2.5) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    805842 8fc2:1E (2.5) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    805843 8fc2:1E (2.5) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    805844 8fc2:1E (2.5) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    805845 8fc2:1F (2.5) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    805846 8fc2:1F (2.5) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    805847 8fc2:1F (2.5) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    805848 8fc2:1F (2.5) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    805849 8fc2:1F (2.5) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    805850 8fc2:1F (2.5) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    805851 8fc2:1F (2.5) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    805852 8fc2:1F (2.5) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    805853 8fc2:1F (2.5) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    805854 8fc2:1F (2.5) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    805855 8fc2:1F (2.5) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    805856 8fc2:1F (2.5) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    805857 8fc2:1F (2.5) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    805858 8fc2:1F (2.5) BS14 ARG ? GO:0003735 ... Q5SHN9 37452045
    805859 8fc2:1G (2.5) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    805860 8fc2:1G (2.5) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    805861 8fc2:1G (2.5) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    805862 8fc2:1G (2.5) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    805863 8fc2:1H (2.5) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    805864 8fc2:1I (2.5) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    805865 8fc2:1N (2.5) BS01 rna ? GO:0003729 ... P60488 37452045
    805866 8fc2:1N (2.5) BS02 MG ? GO:0003729 ... P60488 37452045
    805867 8fc2:1N (2.5) BS03 MG ? GO:0003729 ... P60488 37452045
    805868 8fc2:1O (2.5) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    805869 8fc2:1O (2.5) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    805870 8fc2:1P (2.5) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    805871 8fc2:1P (2.5) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    805872 8fc2:1P (2.5) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    805873 8fc2:1Q (2.5) BS01 rna ? GO:0003735 ... P60489 37452045
    805874 8fc2:1Q (2.5) BS02 rna ? GO:0003735 ... P60489 37452045
    805875 8fc2:1Q (2.5) BS03 MG ? GO:0003735 ... P60489 37452045
    805876 8fc2:1Q (2.5) BS04 MG ? GO:0003735 ... P60489 37452045
    805877 8fc2:1Q (2.5) BS05 MG ? GO:0003735 ... P60489 37452045
    805878 8fc2:1Q (2.5) BS06 MG ? GO:0003735 ... P60489 37452045
    805879 8fc2:1R (2.5) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    805880 8fc2:1R (2.5) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    805881 8fc2:1R (2.5) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    805882 8fc2:1R (2.5) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    805883 8fc2:1S (2.5) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    805884 8fc2:1S (2.5) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    805885 8fc2:1T (2.5) BS01 rna ? GO:0003735 ... P60490 37452045
    805886 8fc2:1T (2.5) BS02 rna ? GO:0003735 ... P60490 37452045
    805887 8fc2:1U (2.5) BS01 rna ? GO:0000027 ... P60491 37452045
    805888 8fc2:1U (2.5) BS02 MG ? GO:0000027 ... P60491 37452045
    805889 8fc2:1U (2.5) BS03 MG ? GO:0000027 ... P60491 37452045
    805890 8fc2:1U (2.5) BS04 MG ? GO:0000027 ... P60491 37452045
    805891 8fc2:1U (2.5) BS05 MG ? GO:0000027 ... P60491 37452045
    805892 8fc2:1U (2.5) BS06 MG ? GO:0000027 ... P60491 37452045
    805893 8fc2:1U (2.5) BS07 MG ? GO:0000027 ... P60491 37452045
    805894 8fc2:1V (2.5) BS01 rna ? GO:0003723 ... P60492 37452045
    805895 8fc2:1V (2.5) BS02 MG ? GO:0003723 ... P60492 37452045
    805896 8fc2:1V (2.5) BS03 MG ? GO:0003723 ... P60492 37452045
    805897 8fc2:1V (2.5) BS04 MG ? GO:0003723 ... P60492 37452045
    805898 8fc2:1W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    805899 8fc2:1X (2.5) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    805900 8fc2:1Y (2.5) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    805901 8fc2:1Y (2.5) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    805902 8fc2:1Z (2.5) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    805903 8fc2:1Z (2.5) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    805904 8fc2:1b (2.5) BS01 rna ? GO:0003735 ... P80371 37452045
    805905 8fc2:1b (2.5) BS02 MG ? GO:0003735 ... P80371 37452045
    805906 8fc2:1c (2.5) BS01 rna ? GO:0003676 ... P80372 37452045
    805907 8fc2:1d (2.5) BS01 rna ? GO:0003723 ... P80373 37452045
    805908 8fc2:1d (2.5) BS02 SF4 ? GO:0003723 ... P80373 37452045
    805909 8fc2:1e (2.5) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    805910 8fc2:1e (2.5) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    805911 8fc2:1f (2.5) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    805912 8fc2:1f (2.5) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    805913 8fc2:1g (2.5) BS01 rna ? GO:0000049 ... P17291 37452045
    805914 8fc2:1h (2.5) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    805915 8fc2:1i (2.5) BS01 rna ? GO:0003723 ... P80374 37452045
    805916 8fc2:1j (2.5) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    805917 8fc2:1k (2.5) BS01 rna ? GO:0003735 ... P80376 37452045
    805918 8fc2:1k (2.5) BS02 MG ? GO:0003735 ... P80376 37452045
    805919 8fc2:1l (2.5) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    805920 8fc2:1l (2.5) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    805921 8fc2:1m (2.5) BS01 rna ? GO:0000049 ... P80377 37452045
    805922 8fc2:1m (2.5) BS02 rna ? GO:0000049 ... P80377 37452045
    805923 8fc2:1m (2.5) BS03 MG ? GO:0000049 ... P80377 37452045
    805924 8fc2:1n (2.5) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    805925 8fc2:1n (2.5) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    805926 8fc2:1o (2.5) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    805927 8fc2:1o (2.5) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    805928 8fc2:1p (2.5) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    805929 8fc2:1q (2.5) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    805930 8fc2:1r (2.5) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    805931 8fc2:1s (2.5) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    805932 8fc2:1t (2.5) BS01 rna ? GO:0003723 ... P80380 37452045
    805933 8fc2:1t (2.5) BS02 MG ? GO:0003723 ... P80380 37452045
    805934 8fc2:1y (2.5) BS01 rna ? GO:0005515 ... P0AD49 37452045
    805935 8fc2:1y (2.5) BS02 MG ? GO:0005515 ... P0AD49 37452045
    805936 8fc2:1y (2.5) BS03 MG ? GO:0005515 ... P0AD49 37452045
    805937 8fc2:20 (2.5) BS01 rna ? GO:0003735 ... P60493 37452045
    805938 8fc2:20 (2.5) BS02 rna ? GO:0003735 ... P60493 37452045
    805939 8fc2:20 (2.5) BS03 MG ? GO:0003735 ... P60493 37452045
    805940 8fc2:21 (2.5) BS01 rna ? GO:0003735 ... P60494 37452045
    805941 8fc2:22 (2.5) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    805942 8fc2:23 (2.5) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    805943 8fc2:23 (2.5) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    805944 8fc2:24 (2.5) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    805945 8fc2:24 (2.5) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    805946 8fc2:25 (2.5) BS01 rna ? GO:0003735 ... P80339 37452045
    805947 8fc2:25 (2.5) BS02 MG ? GO:0003735 ... P80339 37452045
    805948 8fc2:25 (2.5) BS03 ZN ? GO:0003735 ... P80339 37452045
    805949 8fc2:26 (2.5) BS01 rna ? GO:0003735 ... P35871 37452045
    805950 8fc2:26 (2.5) BS02 ZN ? GO:0003735 ... P35871 37452045
    805951 8fc2:27 (2.5) BS01 rna ? GO:0003735 ... P80340 37452045
    805952 8fc2:27 (2.5) BS02 MG ? GO:0003735 ... P80340 37452045
    805953 8fc2:27 (2.5) BS03 MG ? GO:0003735 ... P80340 37452045
    805954 8fc2:28 (2.5) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    805955 8fc2:29 (2.5) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    805956 8fc2:29 (2.5) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    805957 8fc2:2D (2.5) BS01 rna ? GO:0002181 ... P60405 37452045
    805958 8fc2:2D (2.5) BS02 rna ? GO:0002181 ... P60405 37452045
    805959 8fc2:2D (2.5) BS03 MG ? GO:0002181 ... P60405 37452045
    805960 8fc2:2D (2.5) BS04 MG ? GO:0002181 ... P60405 37452045
    805961 8fc2:2D (2.5) BS05 MG ? GO:0002181 ... P60405 37452045
    805962 8fc2:2D (2.5) BS06 MG ? GO:0002181 ... P60405 37452045
    805963 8fc2:2D (2.5) BS07 MG ? GO:0002181 ... P60405 37452045
    805964 8fc2:2D (2.5) BS08 MG ? GO:0002181 ... P60405 37452045
    805965 8fc2:2D (2.5) BS09 MG ? GO:0002181 ... P60405 37452045
    805966 8fc2:2D (2.5) BS10 MG ? GO:0002181 ... P60405 37452045
    805967 8fc2:2E (2.5) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    805968 8fc2:2E (2.5) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    805969 8fc2:2E (2.5) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    805970 8fc2:2F (2.5) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    805971 8fc2:2F (2.5) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    805972 8fc2:2F (2.5) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    805973 8fc2:2F (2.5) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    805974 8fc2:2F (2.5) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    805975 8fc2:2G (2.5) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    805976 8fc2:2G (2.5) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    805977 8fc2:2G (2.5) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    805978 8fc2:2H (2.5) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    805979 8fc2:2I (2.5) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    805980 8fc2:2N (2.5) BS01 rna ? GO:0003729 ... P60488 37452045
    805981 8fc2:2O (2.5) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    805982 8fc2:2O (2.5) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    805983 8fc2:2P (2.5) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    805984 8fc2:2Q (2.5) BS01 rna ? GO:0003735 ... P60489 37452045
    805985 8fc2:2Q (2.5) BS02 rna ? GO:0003735 ... P60489 37452045
    805986 8fc2:2R (2.5) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    805987 8fc2:2R (2.5) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    805988 8fc2:2S (2.5) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    805989 8fc2:2S (2.5) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    805990 8fc2:2T (2.5) BS01 rna ? GO:0003735 ... P60490 37452045
    805991 8fc2:2T (2.5) BS02 rna ? GO:0003735 ... P60490 37452045
    805992 8fc2:2U (2.5) BS01 rna ? GO:0000027 ... P60491 37452045
    805993 8fc2:2V (2.5) BS01 rna ? GO:0003723 ... P60492 37452045
    805994 8fc2:2V (2.5) BS02 MG ? GO:0003723 ... P60492 37452045
    805995 8fc2:2V (2.5) BS03 MG ? GO:0003723 ... P60492 37452045
    805996 8fc2:2W (2.5) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    805997 8fc2:2W (2.5) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    805998 8fc2:2W (2.5) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    805999 8fc2:2X (2.5) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    806000 8fc2:2Y (2.5) BS01 rna ? GO:0003723 ... Q5SHP9 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).