SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4021 4022 4023 4024 4025 4026 4027 4028 4029 4030 4031 4032 4033 4034 4035 4036 4037 4038 4039 4040 4041 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    806001 8fle:LW (2.48) BS02 rna ? GO:0002181 ... P61927 37410842
    806002 8fle:LW (2.48) BS03 ZN ? GO:0002181 ... P61927 37410842
    806003 8fle:LX (2.48) BS01 rna ? GO:0002181 ... P61513 37410842
    806004 8fle:LX (2.48) BS02 ZN ? GO:0002181 ... P61513 37410842
    806005 8fle:LY (2.48) BS01 rna ? GO:0001501 ... P63173 37410842
    806006 8fle:LZ (2.48) BS01 rna ? GO:0002181 ... P62891 37410842
    806007 8fle:LZ (2.48) BS02 rna ? GO:0002181 ... P62891 37410842
    806008 8fle:NK (2.48) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    806009 8fle:NL (2.48) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    806010 8fle:NP (2.48) BS01 rna ? GO:0003676 ... O00488 37410842
    806011 8fle:NP (2.48) BS02 ZN ? GO:0003676 ... O00488 37410842
    806012 8fle:SA (2.48) BS01 rna ? GO:0002181 ... P36578 37410842
    806013 8fle:SA (2.48) BS02 rna ? GO:0002181 ... P36578 37410842
    806014 8fle:SB (2.48) BS01 rna ? GO:0000027 ... P46777 37410842
    806015 8fle:SB (2.48) BS02 rna ? GO:0000027 ... P46777 37410842
    806016 8fle:SC (2.48) BS01 rna ? GO:0002181 ... Q02878 37410842
    806017 8fle:SD (2.48) BS01 rna ? GO:0000463 ... P18124 37410842
    806018 8fle:SD (2.48) BS02 rna ? GO:0000463 ... P18124 37410842
    806019 8fle:SE (2.48) BS01 rna ? GO:0000470 ... P62424 37410842
    806020 8fle:SE (2.48) BS02 rna ? GO:0000470 ... P62424 37410842
    806021 8fle:SF (2.48) BS01 rna ? GO:0002181 ... P62917 37410842
    806022 8fle:SF (2.48) BS02 MG ? GO:0002181 ... P62917 37410842
    806023 8fle:SG (2.48) BS01 rna ? GO:0002181 ... P32969 37410842
    806024 8fle:SI (2.48) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    806025 8fle:SI (2.48) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    806026 8fle:SK (2.48) BS01 rna ? GO:0000054 ... P56537 37410842
    806027 8fle:SM (2.48) BS01 rna ? GO:0000463 ... O00541 37410842
    806028 8fle:SM (2.48) BS02 rna ? GO:0000463 ... O00541 37410842
    806029 8fle:SQ (2.48) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    806030 8fle:SR (2.48) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    806031 8fle:SR (2.48) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    806032 8fle:SV (2.48) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    806033 8fle:SV (2.48) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    806034 8flf:BE (2.65) BS01 rna ? GO:0000122 ... P27635 37410842
    806035 8flf:BE (2.65) BS02 rna ? GO:0000122 ... P27635 37410842
    806036 8flf:L5 (2.65) BS01 rna ? GO:0000027 ... P62913 37410842
    806037 8flf:L5 (2.65) BS02 rna ? GO:0000027 ... P62913 37410842
    806038 8flf:L6 (2.65) BS01 rna ? GO:0001824 ... P26373 37410842
    806039 8flf:L6 (2.65) BS02 rna ? GO:0001824 ... P26373 37410842
    806040 8flf:L7 (2.65) BS01 rna ? GO:0002181 ... P40429 37410842
    806041 8flf:L8 (2.65) BS01 rna ? GO:0002181 ... P50914 37410842
    806042 8flf:L9 (2.65) BS01 rna ? GO:0002181 ... P61313 37410842
    806043 8flf:L9 (2.65) BS02 rna ? GO:0002181 ... P61313 37410842
    806044 8flf:LA (2.65) BS01 rna ? GO:0002181 ... P18621 37410842
    806045 8flf:LA (2.65) BS02 rna ? GO:0002181 ... P18621 37410842
    806046 8flf:LB (2.65) BS01 rna ? GO:0002181 ... Q07020 37410842
    806047 8flf:LC (2.65) BS01 rna ? GO:0002181 ... Q02543 37410842
    806048 8flf:LC (2.65) BS02 rna ? GO:0002181 ... Q02543 37410842
    806049 8flf:LD (2.65) BS01 rna ? GO:0002181 ... P84098 37410842
    806050 8flf:LE (2.65) BS01 rna ? GO:0002181 ... P46778 37410842
    806051 8flf:LE (2.65) BS02 rna ? GO:0002181 ... P46778 37410842
    806052 8flf:LF (2.65) BS01 rna ? GO:0002181 ... P35268 37410842
    806053 8flf:LG (2.65) BS01 rna ? GO:0000122 ... P62829 37410842
    806054 8flf:LH (2.65) BS01 rna ? GO:0002181 ... P62750 37410842
    806055 8flf:LH (2.65) BS02 rna ? GO:0002181 ... P62750 37410842
    806056 8flf:LI (2.65) BS01 rna ? GO:0002181 ... P61254 37410842
    806057 8flf:LI (2.65) BS02 rna ? GO:0002181 ... P61254 37410842
    806058 8flf:LJ (2.65) BS01 rna ? GO:0002181 ... P61353 37410842
    806059 8flf:LK (2.65) BS01 rna ? GO:0002181 ... P46776 37410842
    806060 8flf:LL (2.65) BS01 rna ? GO:0002181 ... P46779 37410842
    806061 8flf:LM (2.65) BS01 rna ? GO:0002181 ... P47914 37410842
    806062 8flf:LM (2.65) BS02 MG ? GO:0002181 ... P47914 37410842
    806063 8flf:LN (2.65) BS01 rna ? GO:0002181 ... P39023 37410842
    806064 8flf:LO (2.65) BS01 rna ? GO:0002181 ... P62888 37410842
    806065 8flf:LP (2.65) BS01 rna ? GO:0002181 ... P62899 37410842
    806066 8flf:LQ (2.65) BS01 rna ? GO:0002181 ... P62910 37410842
    806067 8flf:LQ (2.65) BS02 MG ? GO:0002181 ... P62910 37410842
    806068 8flf:LR (2.65) BS01 rna ? GO:0002181 ... P49207 37410842
    806069 8flf:LR (2.65) BS02 ZN ? GO:0002181 ... P49207 37410842
    806070 8flf:LS (2.65) BS01 rna ? GO:0000463 ... P42766 37410842
    806071 8flf:LS (2.65) BS02 rna ? GO:0000463 ... P42766 37410842
    806072 8flf:LT (2.65) BS01 rna ? GO:0000049 ... P18077 37410842
    806073 8flf:LT (2.65) BS02 MG ? GO:0000049 ... P18077 37410842
    806074 8flf:LU (2.65) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    806075 8flf:LV (2.65) BS01 rna ? GO:0002181 ... P83881 37410842
    806076 8flf:LV (2.65) BS02 ZN ? GO:0002181 ... P83881 37410842
    806077 8flf:LW (2.65) BS01 rna ? GO:0002181 ... P61927 37410842
    806078 8flf:LW (2.65) BS02 rna ? GO:0002181 ... P61927 37410842
    806079 8flf:LW (2.65) BS03 ZN ? GO:0002181 ... P61927 37410842
    806080 8flf:LX (2.65) BS01 rna ? GO:0002181 ... P61513 37410842
    806081 8flf:LX (2.65) BS02 ZN ? GO:0002181 ... P61513 37410842
    806082 8flf:LY (2.65) BS01 rna ? GO:0001501 ... P63173 37410842
    806083 8flf:LZ (2.65) BS01 rna ? GO:0002181 ... P62891 37410842
    806084 8flf:LZ (2.65) BS02 rna ? GO:0002181 ... P62891 37410842
    806085 8flf:NK (2.65) BS01 rna ? GO:0001099 ... Q9BRT6 37410842
    806086 8flf:NP (2.65) BS01 rna ? GO:0003676 ... O00488 37410842
    806087 8flf:NP (2.65) BS02 ZN ? GO:0003676 ... O00488 37410842
    806088 8flf:SA (2.65) BS01 rna ? GO:0002181 ... P36578 37410842
    806089 8flf:SA (2.65) BS02 rna ? GO:0002181 ... P36578 37410842
    806090 8flf:SB (2.65) BS01 rna ? GO:0000027 ... P46777 37410842
    806091 8flf:SB (2.65) BS02 rna ? GO:0000027 ... P46777 37410842
    806092 8flf:SC (2.65) BS01 rna ? GO:0002181 ... Q02878 37410842
    806093 8flf:SD (2.65) BS01 rna ? GO:0000463 ... P18124 37410842
    806094 8flf:SD (2.65) BS02 rna ? GO:0000463 ... P18124 37410842
    806095 8flf:SE (2.65) BS01 rna ? GO:0000470 ... P62424 37410842
    806096 8flf:SE (2.65) BS02 rna ? GO:0000470 ... P62424 37410842
    806097 8flf:SF (2.65) BS01 rna ? GO:0002181 ... P62917 37410842
    806098 8flf:SF (2.65) BS02 MG ? GO:0002181 ... P62917 37410842
    806099 8flf:SG (2.65) BS01 rna ? GO:0002181 ... P32969 37410842
    806100 8flf:SK (2.65) BS01 rna ? GO:0000054 ... P56537 37410842
    806101 8flf:SQ (2.65) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    806102 8flf:SR (2.65) BS01 rna ? GO:0000079 ... Q9BZE4 37410842
    806103 8flf:SR (2.65) BS02 rna ? GO:0000079 ... Q9BZE4 37410842
    806104 8flf:SV (2.65) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    806105 8flf:SV (2.65) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    806106 8flg:A (2.2) BS01 Y8C 2.7.10.2 GO:0004672 ... Q06187 36538993
    806107 8flh:A (1.55) BS01 Y8H 2.7.10.2 GO:0004672 ... Q06187 36538993
    806108 8fli:B (3.8) BS01 rna ? GO:0003676 ... Q8DMK2 38057551
    806109 8flj:A (3.48) BS01 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806110 8flj:A (3.48) BS02 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806111 8flj:A (3.48) BS03 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806112 8flj:A (3.48) BS04 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806113 8flj:B (3.48) BS01 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806114 8flj:C (3.48) BS01 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806115 8flj:C (3.48) BS02 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806116 8flj:D (3.48) BS01 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806117 8flj:D (3.48) BS02 dna 3.1.-.- GO:0003676 ... Q02ML7 37710013
    806118 8flj:E (3.48) BS01 dna ? GO:0003677 ... Q02NN5 37710013
    806119 8flj:F (3.48) BS01 dna ? GO:0003677 ... Q02PW7 37710013
    806120 8flj:F (3.48) BS02 dna ? GO:0003677 ... Q02PW7 37710013
    806121 8flj:G (3.48) BS01 dna ? GO:0003677 ... Q02NN5 37710013
    806122 8flj:G (3.48) BS02 dna ? GO:0003677 ... Q02NN5 37710013
    806123 8flj:H (3.48) BS01 dna ? GO:0003677 ... Q02PW7 37710013
    806124 8flj:H (3.48) BS02 dna ? GO:0003677 ... Q02PW7 37710013
    806125 8flj:M (3.48) BS01 dna 3.1.-.-
    3.6.4.-
    GO:0004386 ... Q02ML8 37710013
    806126 8flj:M (3.48) BS02 dna 3.1.-.-
    3.6.4.-
    GO:0004386 ... Q02ML8 37710013
    806127 8flj:M (3.48) BS03 dna 3.1.-.-
    3.6.4.-
    GO:0004386 ... Q02ML8 37710013
    806128 8flj:M (3.48) BS04 dna 3.1.-.-
    3.6.4.-
    GO:0004386 ... Q02ML8 37710013
    806129 8flj:N (3.48) BS01 dna 3.1.-.-
    3.6.4.-
    GO:0004386 ... Q02ML8 37710013
    806130 8flj:N (3.48) BS02 dna 3.1.-.-
    3.6.4.-
    GO:0004386 ... Q02ML8 37710013
    806131 8flj:N (3.48) BS03 dna 3.1.-.-
    3.6.4.-
    GO:0004386 ... Q02ML8 37710013
    806132 8flj:N (3.48) BS04 dna 3.1.-.-
    3.6.4.-
    GO:0004386 ... Q02ML8 37710013
    806133 8flk:A (4.0) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    806134 8flk:A (4.0) BS02 Y6H ? GO:0000045 ... Q86WV6 37828400
    806135 8flk:B (4.0) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    806136 8flk:C (4.0) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    806137 8flk:C (4.0) BS02 Y6H ? GO:0000045 ... Q86WV6 37828400
    806138 8flk:D (4.0) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    806139 8fll:A (1.498) BS01 Y7W 2.7.10.2 GO:0004672 ... Q06187 36796019
    806140 8flm:A (2.9) BS01 Y6H ? GO:0000045 ... Q86WV6 37828400
    806141 8flm:A (2.9) BS02 1SY ? GO:0000045 ... Q86WV6 37828400
    806142 8flm:A (2.9) BS03 9IM ? GO:0000045 ... Q86WV6 37828400
    806143 8flm:B (2.9) BS01 1SY ? GO:0000045 ... Q86WV6 37828400
    806144 8flm:B (2.9) BS02 9IM ? GO:0000045 ... Q86WV6 37828400
    806145 8flm:C (2.9) BS01 Y6H ? GO:0000045 ... Q86WV6 37828400
    806146 8flm:C (2.9) BS02 9IM ? GO:0000045 ... Q86WV6 37828400
    806147 8flm:C (2.9) BS03 1SY ? GO:0000045 ... Q86WV6 37828400
    806148 8flm:D (2.9) BS01 9IM ? GO:0000045 ... Q86WV6 37828400
    806149 8flm:D (2.9) BS02 1SY ? GO:0000045 ... Q86WV6 37828400
    806150 8fln:A (1.334) BS01 Y7W 2.7.10.2 GO:0004672 ... Q06187 36796019
    806151 8flo:A (1.71) BS01 HEM ? GO:0004497 ... B2HHT9 36842492
    806152 8flo:A (1.71) BS02 SO4 ? GO:0004497 ... B2HHT9 36842492
    806153 8flo:A (1.71) BS03 SO4 ? GO:0004497 ... B2HHT9 36842492
    806154 8flt:R (3.03) BS01 peptide ? GO:0001501 ... Q03431 37148874
    806155 8flv:A (1.3) BS01 ZB9 2.7.10.2 GO:0004672 ... Q06187 36538993
    806156 8flw:H (3.58) BS01 BMA N/A N/A N/A 37436900
    806157 8flw:H (3.58) BS02 MAN N/A N/A N/A 37436900
    806158 8flw:L (3.58) BS01 BMA N/A N/A N/A 37436900
    806159 8fly:A (2.04) BS01 5VG ? GO:0019031 ... C6G099 36961924
    806160 8fly:B (2.04) BS01 5VG ? GO:0019031 ... C6G099 36961924
    806161 8fly:C (2.04) BS01 5VG ? GO:0019031 ... C6G099 36961924
    806162 8fly:D (2.04) BS01 5VG ? GO:0019031 ... C6G099 36961924
    806163 8flz:A (2.0) BS01 7IT ? GO:0019031 ... C6G099 36961924
    806164 8flz:B (2.0) BS01 7IT ? GO:0019031 ... C6G099 36961924
    806165 8flz:C (2.0) BS01 7IT ? GO:0019031 ... C6G099 36961924
    806166 8flz:D (2.0) BS01 7IT ? GO:0019031 ... C6G099 36961924
    806167 8fm0:A (2.08) BS01 Y1O ? GO:0019031 ... C6G099 36961924
    806168 8fm0:B (2.08) BS01 Y1O ? GO:0019031 ... C6G099 36961924
    806169 8fm0:C (2.08) BS01 Y1O ? GO:0019031 ... C6G099 36961924
    806170 8fm0:D (2.08) BS01 Y1O ? GO:0019031 ... C6G099 36961924
    806171 8fm1:A (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806172 8fm1:B (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806173 8fm1:C (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806174 8fm1:D (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806175 8fm1:E (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806176 8fm1:F (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806177 8fm1:G (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806178 8fm1:H (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806179 8fm1:I (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806180 8fm1:J (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806181 8fm1:K (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806182 8fm1:L (3.16) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806183 8fm2:A (2.4) BS01 Y1X ? GO:0019031 ... C6G099 36961924
    806184 8fm2:B (2.4) BS01 Y1X ? GO:0019031 ... C6G099 36961924
    806185 8fm2:C (2.4) BS01 Y1X ? GO:0019031 ... C6G099 36961924
    806186 8fm2:D (2.4) BS01 Y1X ? GO:0019031 ... C6G099 36961924
    806187 8fm3:A (2.11) BS01 Y26 ? GO:0019031 ... C6G099 36961924
    806188 8fm3:B (2.11) BS01 Y26 ? GO:0019031 ... C6G099 36961924
    806189 8fm3:C (2.11) BS01 Y26 ? GO:0019031 ... C6G099 36961924
    806190 8fm3:D (2.11) BS01 Y26 ? GO:0019031 ... C6G099 36961924
    806191 8fm4:A (2.18) BS01 Y2K ? GO:0019031 ... C6G099 36961924
    806192 8fm4:B (2.18) BS01 Y2K ? GO:0019031 ... C6G099 36961924
    806193 8fm4:C (2.18) BS01 Y2K ? GO:0019031 ... C6G099 36961924
    806194 8fm4:D (2.18) BS01 Y2K ? GO:0019031 ... C6G099 36961924
    806195 8fm5:A (1.88) BS01 Y2E ? GO:0019031 ... C6G099 36961924
    806196 8fm5:B (1.88) BS01 Y2E ? GO:0019031 ... C6G099 36961924
    806197 8fm5:C (1.88) BS01 Y2E ? GO:0019031 ... C6G099 36961924
    806198 8fm5:D (1.88) BS01 Y2E ? GO:0019031 ... C6G099 36961924
    806199 8fm6:A (2.85) BS01 HEB ? GO:0046872 ... P73129 38609367
    806200 8fm6:B (2.85) BS01 HEB ? GO:0046872 ... P73129 38609367

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).