SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    806201 8fm7:A (2.34) BS01 Y2O ? GO:0019031 ... C6G099 36961924
    806202 8fm7:B (2.34) BS01 Y2O ? GO:0019031 ... C6G099 36961924
    806203 8fm7:C (2.34) BS01 Y2O ? GO:0019031 ... C6G099 36961924
    806204 8fm7:D (2.34) BS01 Y2O ? GO:0019031 ... C6G099 36961924
    806205 8fm8:A (2.47) BS01 Y1T ? GO:0019031 ... C6G099 36961924
    806206 8fm8:B (2.47) BS01 Y1T ? GO:0019031 ... C6G099 36961924
    806207 8fm8:C (2.47) BS01 Y1T ? GO:0019031 ... C6G099 36961924
    806208 8fm8:D (2.47) BS01 Y1T ? GO:0019031 ... C6G099 36961924
    806209 8fmf:A (2.1) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806210 8fmf:A (2.1) BS02 RWB ? GO:0046872 ... A0A2P0QGK5 38321146
    806211 8fmf:A (2.1) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806212 8fmf:A (2.1) BS04 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806213 8fmf:B (2.1) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806214 8fmf:B (2.1) BS02 RWB ? GO:0046872 ... A0A2P0QGK5 38321146
    806215 8fmf:B (2.1) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806216 8fmf:B (2.1) BS04 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806217 8fmf:B (2.1) BS05 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806218 8fmf:C (2.1) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806219 8fmf:C (2.1) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806220 8fmf:C (2.1) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806221 8fmf:D (2.1) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806222 8fmf:D (2.1) BS02 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806223 8fmf:D (2.1) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806224 8fmf:D (2.1) BS04 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806225 8fmg:A (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806226 8fmg:A (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806227 8fmg:A (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806228 8fmg:B (1.79) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806229 8fmg:B (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806230 8fmg:B (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806231 8fmg:C (1.79) BS01 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806232 8fmg:C (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806233 8fmg:C (1.79) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806234 8fmg:C (1.79) BS04 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806235 8fmg:D (1.79) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806236 8fmg:D (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806237 8fmg:D (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806238 8fmg:E (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806239 8fmg:E (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806240 8fmg:E (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806241 8fmg:F (1.79) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806242 8fmg:F (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806243 8fmg:F (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806244 8fmg:G (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806245 8fmg:G (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806246 8fmg:G (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806247 8fmg:H (1.79) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806248 8fmg:H (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806249 8fmg:H (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806250 8fmg:K (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806251 8fmg:K (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806252 8fmg:K (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806253 8fmg:L (1.79) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806254 8fmg:L (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806255 8fmg:L (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806256 8fmg:M (1.79) BS01 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806257 8fmg:M (1.79) BS02 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806258 8fmg:M (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806259 8fmg:N (1.79) BS01 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806260 8fmg:N (1.79) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806261 8fmg:N (1.79) BS03 Y4F ? GO:0046872 ... A0A2P0QGK5 38321146
    806262 8fmh:A (1.87) BS01 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806263 8fmh:A (1.87) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806264 8fmh:A (1.87) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806265 8fmh:B (1.87) BS01 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806266 8fmh:B (1.87) BS02 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806267 8fmh:B (1.87) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806268 8fmh:B (1.87) BS04 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806269 8fmh:C (1.87) BS01 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806270 8fmh:C (1.87) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806271 8fmh:C (1.87) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806272 8fmh:D (1.87) BS01 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806273 8fmh:D (1.87) BS02 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806274 8fmh:D (1.87) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806275 8fmh:E (1.87) BS01 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806276 8fmh:E (1.87) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806277 8fmh:E (1.87) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806278 8fmh:F (1.87) BS01 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806279 8fmh:F (1.87) BS02 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806280 8fmh:F (1.87) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806281 8fmh:F (1.87) BS04 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806282 8fmh:G (1.87) BS01 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806283 8fmh:G (1.87) BS02 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806284 8fmh:G (1.87) BS03 MG ? GO:0046872 ... A0A2P0QGK5 38321146
    806285 8fmh:H (1.87) BS01 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806286 8fmh:H (1.87) BS02 4UR ? GO:0046872 ... A0A2P0QGK5 38321146
    806287 8fmh:H (1.87) BS03 ZN ? GO:0046872 ... A0A2P0QGK5 38321146
    806288 8fmi:A (1.12) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37938120
    806289 8fmj:A (1.33) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37938120
    806290 8fmk:A (1.48) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37938120
    806291 8fmm:A (3.112) BS01 CA ? GO:0002086 ... P63316 N/A
    806292 8fmm:A (3.112) BS02 CA ? GO:0002086 ... P63316 N/A
    806293 8fmm:A (3.112) BS03 CA ? GO:0002086 ... P63316 N/A
    806294 8fmm:D (3.112) BS01 CA ? GO:0002086 ... P63316 N/A
    806295 8fmm:D (3.112) BS02 CA ? GO:0002086 ... P63316 N/A
    806296 8fmm:D (3.112) BS03 CA ? GO:0002086 ... P63316 N/A
    806297 8fmn:A (3.101) BS01 CA ? GO:0002086 ... P63316 N/A
    806298 8fmn:A (3.101) BS02 CA ? GO:0002086 ... P63316 N/A
    806299 8fmn:A (3.101) BS03 CA ? GO:0002086 ... P63316 N/A
    806300 8fmn:D (3.101) BS01 CA ? GO:0002086 ... P63316 N/A
    806301 8fmn:D (3.101) BS02 CA ? GO:0002086 ... P63316 N/A
    806302 8fmn:D (3.101) BS03 CA ? GO:0002086 ... P63316 N/A
    806303 8fmo:A (2.612) BS01 CA ? GO:0002086 ... P63316 N/A
    806304 8fmo:A (2.612) BS02 CA ? GO:0002086 ... P63316 N/A
    806305 8fmo:A (2.612) BS03 CA ? GO:0002086 ... P63316 N/A
    806306 8fmo:D (2.612) BS01 CA ? GO:0002086 ... P63316 N/A
    806307 8fmo:D (2.612) BS02 CA ? GO:0002086 ... P63316 N/A
    806308 8fmo:D (2.612) BS03 CA ? GO:0002086 ... P63316 N/A
    806309 8fmp:A (3.24) BS01 CA ? GO:0002086 ... P63316 N/A
    806310 8fmp:A (3.24) BS02 CA ? GO:0002086 ... P63316 N/A
    806311 8fmp:A (3.24) BS03 CA ? GO:0002086 ... P63316 N/A
    806312 8fmp:D (3.24) BS01 CA ? GO:0002086 ... P63316 N/A
    806313 8fmp:D (3.24) BS02 CA ? GO:0002086 ... P63316 N/A
    806314 8fmp:D (3.24) BS03 CA ? GO:0002086 ... P63316 N/A
    806315 8fmq:A (3.248) BS01 CA ? GO:0002086 ... P63316 N/A
    806316 8fmq:A (3.248) BS02 CA ? GO:0002086 ... P63316 N/A
    806317 8fmq:A (3.248) BS03 CA ? GO:0002086 ... P63316 N/A
    806318 8fmq:D (3.248) BS01 CA ? GO:0002086 ... P63316 N/A
    806319 8fmq:D (3.248) BS02 CA ? GO:0002086 ... P63316 N/A
    806320 8fmq:D (3.248) BS03 CA ? GO:0002086 ... P63316 N/A
    806321 8fmr:A (3.238) BS01 CA ? GO:0002086 ... P63316 N/A
    806322 8fmr:A (3.238) BS02 CA ? GO:0002086 ... P63316 N/A
    806323 8fmr:A (3.238) BS03 CA ? GO:0002086 ... P63316 N/A
    806324 8fmr:D (3.238) BS01 CA ? GO:0002086 ... P63316 N/A
    806325 8fmr:D (3.238) BS02 CA ? GO:0002086 ... P63316 N/A
    806326 8fmr:D (3.238) BS03 CA ? GO:0002086 ... P63316 N/A
    806327 8fms:A (3.435) BS01 CA ? GO:0002086 ... P63316 N/A
    806328 8fms:A (3.435) BS02 CA ? GO:0002086 ... P63316 N/A
    806329 8fms:A (3.435) BS03 CA ? GO:0002086 ... P63316 N/A
    806330 8fms:D (3.435) BS01 CA ? GO:0002086 ... P63316 N/A
    806331 8fms:D (3.435) BS02 CA ? GO:0002086 ... P63316 N/A
    806332 8fms:D (3.435) BS03 CA ? GO:0002086 ... P63316 N/A
    806333 8fmt:A (2.8) BS01 CA ? GO:0002086 ... P63316 N/A
    806334 8fmt:A (2.8) BS02 CA ? GO:0002086 ... P63316 N/A
    806335 8fmt:A (2.8) BS03 CA ? GO:0002086 ... P63316 N/A
    806336 8fmt:D (2.8) BS01 CA ? GO:0002086 ... P63316 N/A
    806337 8fmt:D (2.8) BS02 CA ? GO:0002086 ... P63316 N/A
    806338 8fmt:D (2.8) BS03 CA ? GO:0002086 ... P63316 N/A
    806339 8fmu:A (2.03) BS01 Y3T ? GO:0000978 ... O15178 38348945
    806340 8fmu:A (2.03) BS02 Y3T ? GO:0000978 ... O15178 38348945
    806341 8fmu:B (2.03) BS01 Y3T ? GO:0000978 ... O15178 38348945
    806342 8fmu:B (2.03) BS02 Y3T ? GO:0000978 ... O15178 38348945
    806343 8fmv:C (3.34) BS01 ATP 7.6.2.- GO:0005524 ... O07550 37938578
    806344 8fmv:C (3.34) BS02 HT1 7.6.2.- GO:0005524 ... O07550 37938578
    806345 8fmv:C (3.34) BS03 HT1 7.6.2.- GO:0005524 ... O07550 37938578
    806346 8fmv:D (3.34) BS01 ATP 7.6.2.- GO:0005524 ... O07549 37938578
    806347 8fmv:D (3.34) BS02 HT1 7.6.2.- GO:0005524 ... O07549 37938578
    806348 8fmw:AC (2.86) BS01 rna ? GO:0000049 ... O51353 37907464
    806349 8fmw:AD (2.86) BS01 rna ? GO:0002181 ... P94270 37907464
    806350 8fmw:AE (2.86) BS01 rna ? GO:0003735 ... P94267 37907464
    806351 8fmw:AF (2.86) BS01 rna ? GO:0003735 ... P94268 37907464
    806352 8fmw:AG (2.86) BS01 rna ? GO:0000049 ... O51443 37907464
    806353 8fmw:AG (2.86) BS02 rna ? GO:0000049 ... O51443 37907464
    806354 8fmw:AH (2.86) BS01 rna ? GO:0002181 ... O51446 37907464
    806355 8fmw:AI (2.86) BS01 rna ? GO:0003735 ... O51139 37907464
    806356 8fmw:AJ (2.86) BS01 rna ? GO:0003735 ... O51352 37907464
    806357 8fmw:AK (2.86) BS01 rna ? GO:0003735 ... O51354 37907464
    806358 8fmw:AL (2.86) BS01 rna ? GO:0003729 ... O51314 37907464
    806359 8fmw:AM (2.86) BS01 rna ? GO:0003735 ... O51441 37907464
    806360 8fmw:AM (2.86) BS02 rna ? GO:0003735 ... O51441 37907464
    806361 8fmw:AN (2.86) BS01 rna ? GO:0003735 ... O51450 37907464
    806362 8fmw:AO (2.86) BS01 rna ? GO:0000049 ... O51438 37907464
    806363 8fmw:AP (2.86) BS01 rna ? GO:0003735 ... O51456 37907464
    806364 8fmw:AQ (2.86) BS01 rna ? GO:0003735 ... O51447 37907464
    806365 8fmw:AQ (2.86) BS02 rna ? GO:0003735 ... O51447 37907464
    806366 8fmw:AR (2.86) BS01 rna ? GO:0003735 ... O51642 37907464
    806367 8fmw:AR (2.86) BS02 rna ? GO:0003735 ... O51642 37907464
    806368 8fmw:AS (2.86) BS01 rna ? GO:0000027 ... O51206 37907464
    806369 8fmw:AT (2.86) BS01 rna ? GO:0003723 ... O51719 37907464
    806370 8fmw:AU (2.86) BS01 rna ? GO:0003735 ... P94272 37907464
    806371 8fmw:AV (2.86) BS01 rna ? GO:0003735 ... P94269 37907464
    806372 8fmw:AW (2.86) BS01 rna ? GO:0003723 ... O51442 37907464
    806373 8fmw:AX (2.86) BS01 rna ? GO:0003723 ... O51727 37907464
    806374 8fmw:AX (2.86) BS02 rna ? GO:0003723 ... O51727 37907464
    806375 8fmw:AY (2.86) BS01 rna ? GO:0003735 ... O51721 37907464
    806376 8fmw:AY (2.86) BS02 rna ? GO:0003735 ... O51721 37907464
    806377 8fmw:AZ (2.86) BS01 rna ? GO:0003735 ... O51325 37907464
    806378 8fmw:Aa (2.86) BS01 rna ? GO:0003735 ... O51439 37907464
    806379 8fmw:Ab (2.86) BS01 rna N/A GO:0003735 ... N/A 37907464
    806380 8fmw:Ab (2.86) BS02 rna N/A GO:0003735 ... N/A 37907464
    806381 8fmw:Ac (2.86) BS01 rna ? GO:0003735 ... O51247 37907464
    806382 8fmw:Ad (2.86) BS01 rna ? GO:0003735 ... O51646 37907464
    806383 8fmw:Ad (2.86) BS02 ZN ? GO:0003735 ... O51646 37907464
    806384 8fmw:Ae (2.86) BS01 rna ? GO:0003735 ... O51357 37907464
    806385 8fmw:Af (2.86) BS01 rna ? GO:0003735 ... P29220 37907464
    806386 8fmw:Ag (2.86) BS01 rna ? GO:0003735 ... O51207 37907464
    806387 8fmw:Ah (2.86) BS01 rna ? GO:0003735 ... O51452 37907464
    806388 8fmw:Ah (2.86) BS02 ZN ? GO:0003735 ... O51452 37907464
    806389 8fmw:Ai (2.86) BS01 rna ? N/A O51184 37907464
    806390 8fmw:C (2.86) BS01 rna ? GO:0003676 ... P94273 37907464
    806391 8fmw:D (2.86) BS01 rna ? GO:0003723 ... O51560 37907464
    806392 8fmw:E (2.86) BS01 rna ? GO:0003723 ... O51448 37907464
    806393 8fmw:F (2.86) BS01 rna ? GO:0003735 ... O51142 37907464
    806394 8fmw:G (2.86) BS01 rna ? GO:0000049 ... O51347 37907464
    806395 8fmw:G (2.86) BS02 rna ? GO:0000049 ... O51347 37907464
    806396 8fmw:H (2.86) BS01 rna ? GO:0003735 ... O51445 37907464
    806397 8fmw:I (2.86) BS01 rna ? GO:0003723 ... O51313 37907464
    806398 8fmw:J (2.86) BS01 rna ? GO:0000049 ... P94266 37907464
    806399 8fmw:K (2.86) BS01 rna ? GO:0003735 ... O51454 37907464
    806400 8fmw:L (2.86) BS01 rna ? GO:0000049 ... O51348 37907464

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).