SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    806201 8fc3:2F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    806202 8fc3:2F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    806203 8fc3:2F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    806204 8fc3:2F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    806205 8fc3:2F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    806206 8fc3:2G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    806207 8fc3:2G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    806208 8fc3:2G (2.6) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    806209 8fc3:2G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    806210 8fc3:2G (2.6) BS05 MG ? GO:0000049 ... Q5SHQ0 37452045
    806211 8fc3:2H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    806212 8fc3:2I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    806213 8fc3:2I (2.6) BS02 MG ? GO:0003735 ... Q5SLQ1 37452045
    806214 8fc3:2N (2.6) BS01 rna ? GO:0003729 ... P60488 37452045
    806215 8fc3:2O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    806216 8fc3:2O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    806217 8fc3:2P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    806218 8fc3:2Q (2.6) BS01 rna ? GO:0003735 ... P60489 37452045
    806219 8fc3:2Q (2.6) BS02 rna ? GO:0003735 ... P60489 37452045
    806220 8fc3:2Q (2.6) BS03 MG ? GO:0003735 ... P60489 37452045
    806221 8fc3:2R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    806222 8fc3:2R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    806223 8fc3:2S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    806224 8fc3:2S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    806225 8fc3:2T (2.6) BS01 rna ? GO:0003735 ... P60490 37452045
    806226 8fc3:2T (2.6) BS02 rna ? GO:0003735 ... P60490 37452045
    806227 8fc3:2U (2.6) BS01 rna ? GO:0000027 ... P60491 37452045
    806228 8fc3:2V (2.6) BS01 rna ? GO:0003723 ... P60492 37452045
    806229 8fc3:2V (2.6) BS02 MG ? GO:0003723 ... P60492 37452045
    806230 8fc3:2V (2.6) BS03 MG ? GO:0003723 ... P60492 37452045
    806231 8fc3:2W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    806232 8fc3:2W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    806233 8fc3:2W (2.6) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    806234 8fc3:2X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    806235 8fc3:2Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    806236 8fc3:2Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    806237 8fc3:2Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    806238 8fc3:2Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    806239 8fc3:2b (2.6) BS01 rna ? GO:0003735 ... P80371 37452045
    806240 8fc3:2c (2.6) BS01 rna ? GO:0003676 ... P80372 37452045
    806241 8fc3:2d (2.6) BS01 rna ? GO:0003723 ... P80373 37452045
    806242 8fc3:2d (2.6) BS02 SF4 ? GO:0003723 ... P80373 37452045
    806243 8fc3:2e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    806244 8fc3:2f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    806245 8fc3:2f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    806246 8fc3:2g (2.6) BS01 rna ? GO:0000049 ... P17291 37452045
    806247 8fc3:2h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    806248 8fc3:2i (2.6) BS01 rna ? GO:0003723 ... P80374 37452045
    806249 8fc3:2j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    806250 8fc3:2k (2.6) BS01 rna ? GO:0003735 ... P80376 37452045
    806251 8fc3:2k (2.6) BS02 MG ? GO:0003735 ... P80376 37452045
    806252 8fc3:2l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    806253 8fc3:2l (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    806254 8fc3:2m (2.6) BS01 rna ? GO:0000049 ... P80377 37452045
    806255 8fc3:2n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    806256 8fc3:2n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    806257 8fc3:2o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    806258 8fc3:2o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    806259 8fc3:2p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    806260 8fc3:2q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    806261 8fc3:2r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    806262 8fc3:2s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    806263 8fc3:2t (2.6) BS01 rna ? GO:0003723 ... P80380 37452045
    806264 8fc3:2y (2.6) BS01 rna ? GO:0005515 ... P0AD49 37452045
    806265 8fc4:10 (2.45) BS01 rna ? GO:0003735 ... P60493 37452045
    806266 8fc4:10 (2.45) BS02 rna ? GO:0003735 ... P60493 37452045
    806267 8fc4:10 (2.45) BS03 MG ? GO:0003735 ... P60493 37452045
    806268 8fc4:10 (2.45) BS04 MG ? GO:0003735 ... P60493 37452045
    806269 8fc4:11 (2.45) BS01 rna ? GO:0003735 ... P60494 37452045
    806270 8fc4:12 (2.45) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    806271 8fc4:13 (2.45) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    806272 8fc4:13 (2.45) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    806273 8fc4:13 (2.45) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    806274 8fc4:13 (2.45) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    806275 8fc4:14 (2.45) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    806276 8fc4:14 (2.45) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    806277 8fc4:15 (2.45) BS01 rna ? GO:0003735 ... P80339 37452045
    806278 8fc4:15 (2.45) BS02 MG ? GO:0003735 ... P80339 37452045
    806279 8fc4:15 (2.45) BS03 MG ? GO:0003735 ... P80339 37452045
    806280 8fc4:15 (2.45) BS04 MG ? GO:0003735 ... P80339 37452045
    806281 8fc4:15 (2.45) BS05 ZN ? GO:0003735 ... P80339 37452045
    806282 8fc4:16 (2.45) BS01 rna ? GO:0003735 ... P35871 37452045
    806283 8fc4:16 (2.45) BS02 ZN ? GO:0003735 ... P35871 37452045
    806284 8fc4:17 (2.45) BS01 rna ? GO:0003735 ... P80340 37452045
    806285 8fc4:17 (2.45) BS02 MG ? GO:0003735 ... P80340 37452045
    806286 8fc4:17 (2.45) BS03 MG ? GO:0003735 ... P80340 37452045
    806287 8fc4:17 (2.45) BS04 MG ? GO:0003735 ... P80340 37452045
    806288 8fc4:17 (2.45) BS05 MG ? GO:0003735 ... P80340 37452045
    806289 8fc4:18 (2.45) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    806290 8fc4:18 (2.45) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    806291 8fc4:19 (2.45) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    806292 8fc4:19 (2.45) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    806293 8fc4:1D (2.45) BS01 rna ? GO:0002181 ... P60405 37452045
    806294 8fc4:1D (2.45) BS02 rna ? GO:0002181 ... P60405 37452045
    806295 8fc4:1D (2.45) BS03 MG ? GO:0002181 ... P60405 37452045
    806296 8fc4:1D (2.45) BS04 MG ? GO:0002181 ... P60405 37452045
    806297 8fc4:1D (2.45) BS05 MG ? GO:0002181 ... P60405 37452045
    806298 8fc4:1D (2.45) BS06 MG ? GO:0002181 ... P60405 37452045
    806299 8fc4:1D (2.45) BS07 MG ? GO:0002181 ... P60405 37452045
    806300 8fc4:1D (2.45) BS08 MG ? GO:0002181 ... P60405 37452045
    806301 8fc4:1D (2.45) BS09 MG ? GO:0002181 ... P60405 37452045
    806302 8fc4:1D (2.45) BS10 MG ? GO:0002181 ... P60405 37452045
    806303 8fc4:1D (2.45) BS11 MG ? GO:0002181 ... P60405 37452045
    806304 8fc4:1D (2.45) BS12 MG ? GO:0002181 ... P60405 37452045
    806305 8fc4:1D (2.45) BS13 MG ? GO:0002181 ... P60405 37452045
    806306 8fc4:1D (2.45) BS14 MG ? GO:0002181 ... P60405 37452045
    806307 8fc4:1E (2.45) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    806308 8fc4:1E (2.45) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    806309 8fc4:1E (2.45) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    806310 8fc4:1E (2.45) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    806311 8fc4:1E (2.45) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    806312 8fc4:1F (2.45) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    806313 8fc4:1F (2.45) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    806314 8fc4:1F (2.45) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    806315 8fc4:1F (2.45) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    806316 8fc4:1F (2.45) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    806317 8fc4:1F (2.45) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    806318 8fc4:1F (2.45) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    806319 8fc4:1F (2.45) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    806320 8fc4:1F (2.45) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    806321 8fc4:1F (2.45) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    806322 8fc4:1F (2.45) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    806323 8fc4:1F (2.45) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    806324 8fc4:1F (2.45) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    806325 8fc4:1F (2.45) BS14 MG ? GO:0003735 ... Q5SHN9 37452045
    806326 8fc4:1F (2.45) BS15 MG ? GO:0003735 ... Q5SHN9 37452045
    806327 8fc4:1F (2.45) BS16 ARG ? GO:0003735 ... Q5SHN9 37452045
    806328 8fc4:1G (2.45) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    806329 8fc4:1G (2.45) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    806330 8fc4:1G (2.45) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    806331 8fc4:1G (2.45) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    806332 8fc4:1H (2.45) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    806333 8fc4:1I (2.45) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    806334 8fc4:1N (2.45) BS01 rna ? GO:0003729 ... P60488 37452045
    806335 8fc4:1N (2.45) BS02 MG ? GO:0003729 ... P60488 37452045
    806336 8fc4:1N (2.45) BS03 MG ? GO:0003729 ... P60488 37452045
    806337 8fc4:1O (2.45) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    806338 8fc4:1O (2.45) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    806339 8fc4:1P (2.45) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    806340 8fc4:1P (2.45) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    806341 8fc4:1P (2.45) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    806342 8fc4:1P (2.45) BS04 MG ? GO:0003735 ... Q5SHQ7 37452045
    806343 8fc4:1Q (2.45) BS01 rna ? GO:0003735 ... P60489 37452045
    806344 8fc4:1Q (2.45) BS02 rna ? GO:0003735 ... P60489 37452045
    806345 8fc4:1Q (2.45) BS03 MG ? GO:0003735 ... P60489 37452045
    806346 8fc4:1Q (2.45) BS04 MG ? GO:0003735 ... P60489 37452045
    806347 8fc4:1Q (2.45) BS05 MG ? GO:0003735 ... P60489 37452045
    806348 8fc4:1Q (2.45) BS06 MG ? GO:0003735 ... P60489 37452045
    806349 8fc4:1Q (2.45) BS07 MG ? GO:0003735 ... P60489 37452045
    806350 8fc4:1R (2.45) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    806351 8fc4:1R (2.45) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    806352 8fc4:1R (2.45) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    806353 8fc4:1R (2.45) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    806354 8fc4:1R (2.45) BS05 MG ? GO:0003735 ... Q9Z9H5 37452045
    806355 8fc4:1S (2.45) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    806356 8fc4:1S (2.45) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    806357 8fc4:1T (2.45) BS01 rna ? GO:0003735 ... P60490 37452045
    806358 8fc4:1T (2.45) BS02 rna ? GO:0003735 ... P60490 37452045
    806359 8fc4:1U (2.45) BS01 rna ? GO:0000027 ... P60491 37452045
    806360 8fc4:1U (2.45) BS02 MG ? GO:0000027 ... P60491 37452045
    806361 8fc4:1U (2.45) BS03 MG ? GO:0000027 ... P60491 37452045
    806362 8fc4:1U (2.45) BS04 MG ? GO:0000027 ... P60491 37452045
    806363 8fc4:1U (2.45) BS05 MG ? GO:0000027 ... P60491 37452045
    806364 8fc4:1U (2.45) BS06 MG ? GO:0000027 ... P60491 37452045
    806365 8fc4:1U (2.45) BS07 MG ? GO:0000027 ... P60491 37452045
    806366 8fc4:1V (2.45) BS01 rna ? GO:0003723 ... P60492 37452045
    806367 8fc4:1V (2.45) BS02 MG ? GO:0003723 ... P60492 37452045
    806368 8fc4:1V (2.45) BS03 MG ? GO:0003723 ... P60492 37452045
    806369 8fc4:1V (2.45) BS04 MG ? GO:0003723 ... P60492 37452045
    806370 8fc4:1W (2.45) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    806371 8fc4:1W (2.45) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    806372 8fc4:1W (2.45) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    806373 8fc4:1W (2.45) BS04 MG ? GO:0003735 ... Q5SHP3 37452045
    806374 8fc4:1X (2.45) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    806375 8fc4:1Y (2.45) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    806376 8fc4:1Y (2.45) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    806377 8fc4:1Z (2.45) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    806378 8fc4:1Z (2.45) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    806379 8fc4:1b (2.45) BS01 rna ? GO:0003735 ... P80371 37452045
    806380 8fc4:1b (2.45) BS02 MG ? GO:0003735 ... P80371 37452045
    806381 8fc4:1c (2.45) BS01 rna ? GO:0003676 ... P80372 37452045
    806382 8fc4:1d (2.45) BS01 rna ? GO:0003723 ... P80373 37452045
    806383 8fc4:1d (2.45) BS02 SF4 ? GO:0003723 ... P80373 37452045
    806384 8fc4:1e (2.45) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    806385 8fc4:1e (2.45) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    806386 8fc4:1f (2.45) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    806387 8fc4:1g (2.45) BS01 rna ? GO:0000049 ... P17291 37452045
    806388 8fc4:1h (2.45) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    806389 8fc4:1i (2.45) BS01 rna ? GO:0003723 ... P80374 37452045
    806390 8fc4:1j (2.45) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    806391 8fc4:1k (2.45) BS01 rna ? GO:0003735 ... P80376 37452045
    806392 8fc4:1k (2.45) BS02 MG ? GO:0003735 ... P80376 37452045
    806393 8fc4:1l (2.45) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    806394 8fc4:1l (2.45) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    806395 8fc4:1m (2.45) BS01 rna ? GO:0000049 ... P80377 37452045
    806396 8fc4:1m (2.45) BS02 rna ? GO:0000049 ... P80377 37452045
    806397 8fc4:1m (2.45) BS03 MG ? GO:0000049 ... P80377 37452045
    806398 8fc4:1n (2.45) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    806399 8fc4:1n (2.45) BS02 MG ? GO:0003735 ... P0DOY6 37452045
    806400 8fc4:1n (2.45) BS03 ZN ? GO:0003735 ... P0DOY6 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).