SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    806401 8fc4:1o (2.45) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    806402 8fc4:1o (2.45) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    806403 8fc4:1p (2.45) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    806404 8fc4:1q (2.45) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    806405 8fc4:1r (2.45) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    806406 8fc4:1s (2.45) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    806407 8fc4:1t (2.45) BS01 rna ? GO:0003723 ... P80380 37452045
    806408 8fc4:1t (2.45) BS02 MG ? GO:0003723 ... P80380 37452045
    806409 8fc4:1y (2.45) BS01 rna ? GO:0005515 ... P0AD49 37452045
    806410 8fc4:1y (2.45) BS02 MG ? GO:0005515 ... P0AD49 37452045
    806411 8fc4:20 (2.45) BS01 rna ? GO:0003735 ... P60493 37452045
    806412 8fc4:20 (2.45) BS02 rna ? GO:0003735 ... P60493 37452045
    806413 8fc4:20 (2.45) BS03 MG ? GO:0003735 ... P60493 37452045
    806414 8fc4:21 (2.45) BS01 rna ? GO:0003735 ... P60494 37452045
    806415 8fc4:22 (2.45) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    806416 8fc4:23 (2.45) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    806417 8fc4:23 (2.45) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    806418 8fc4:23 (2.45) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    806419 8fc4:24 (2.45) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    806420 8fc4:24 (2.45) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    806421 8fc4:25 (2.45) BS01 rna ? GO:0003735 ... P80339 37452045
    806422 8fc4:25 (2.45) BS02 ZN ? GO:0003735 ... P80339 37452045
    806423 8fc4:26 (2.45) BS01 rna ? GO:0003735 ... P35871 37452045
    806424 8fc4:26 (2.45) BS02 ZN ? GO:0003735 ... P35871 37452045
    806425 8fc4:27 (2.45) BS01 rna ? GO:0003735 ... P80340 37452045
    806426 8fc4:27 (2.45) BS02 MG ? GO:0003735 ... P80340 37452045
    806427 8fc4:28 (2.45) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    806428 8fc4:29 (2.45) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    806429 8fc4:29 (2.45) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    806430 8fc4:2D (2.45) BS01 rna ? GO:0002181 ... P60405 37452045
    806431 8fc4:2D (2.45) BS02 rna ? GO:0002181 ... P60405 37452045
    806432 8fc4:2D (2.45) BS03 MG ? GO:0002181 ... P60405 37452045
    806433 8fc4:2D (2.45) BS04 MG ? GO:0002181 ... P60405 37452045
    806434 8fc4:2D (2.45) BS05 MG ? GO:0002181 ... P60405 37452045
    806435 8fc4:2E (2.45) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    806436 8fc4:2E (2.45) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    806437 8fc4:2F (2.45) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    806438 8fc4:2F (2.45) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    806439 8fc4:2F (2.45) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    806440 8fc4:2F (2.45) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    806441 8fc4:2G (2.45) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    806442 8fc4:2G (2.45) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    806443 8fc4:2G (2.45) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    806444 8fc4:2H (2.45) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    806445 8fc4:2I (2.45) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    806446 8fc4:2N (2.45) BS01 rna ? GO:0003729 ... P60488 37452045
    806447 8fc4:2O (2.45) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    806448 8fc4:2O (2.45) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    806449 8fc4:2P (2.45) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    806450 8fc4:2Q (2.45) BS01 rna ? GO:0003735 ... P60489 37452045
    806451 8fc4:2Q (2.45) BS02 rna ? GO:0003735 ... P60489 37452045
    806452 8fc4:2Q (2.45) BS03 MG ? GO:0003735 ... P60489 37452045
    806453 8fc4:2Q (2.45) BS04 MG ? GO:0003735 ... P60489 37452045
    806454 8fc4:2R (2.45) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    806455 8fc4:2S (2.45) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    806456 8fc4:2S (2.45) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    806457 8fc4:2T (2.45) BS01 rna ? GO:0003735 ... P60490 37452045
    806458 8fc4:2T (2.45) BS02 rna ? GO:0003735 ... P60490 37452045
    806459 8fc4:2U (2.45) BS01 rna ? GO:0000027 ... P60491 37452045
    806460 8fc4:2V (2.45) BS01 rna ? GO:0003723 ... P60492 37452045
    806461 8fc4:2W (2.45) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    806462 8fc4:2W (2.45) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    806463 8fc4:2W (2.45) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    806464 8fc4:2X (2.45) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    806465 8fc4:2Y (2.45) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    806466 8fc4:2Y (2.45) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    806467 8fc4:2Z (2.45) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    806468 8fc4:2Z (2.45) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    806469 8fc4:2b (2.45) BS01 rna ? GO:0003735 ... P80371 37452045
    806470 8fc4:2c (2.45) BS01 rna ? GO:0003676 ... P80372 37452045
    806471 8fc4:2d (2.45) BS01 rna ? GO:0003723 ... P80373 37452045
    806472 8fc4:2d (2.45) BS02 SF4 ? GO:0003723 ... P80373 37452045
    806473 8fc4:2e (2.45) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    806474 8fc4:2f (2.45) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    806475 8fc4:2f (2.45) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    806476 8fc4:2g (2.45) BS01 rna ? GO:0000049 ... P17291 37452045
    806477 8fc4:2h (2.45) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    806478 8fc4:2i (2.45) BS01 rna ? GO:0003723 ... P80374 37452045
    806479 8fc4:2j (2.45) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    806480 8fc4:2k (2.45) BS01 rna ? GO:0003735 ... P80376 37452045
    806481 8fc4:2k (2.45) BS02 MG ? GO:0003735 ... P80376 37452045
    806482 8fc4:2l (2.45) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    806483 8fc4:2m (2.45) BS01 rna ? GO:0000049 ... P80377 37452045
    806484 8fc4:2n (2.45) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    806485 8fc4:2n (2.45) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    806486 8fc4:2o (2.45) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    806487 8fc4:2o (2.45) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    806488 8fc4:2p (2.45) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    806489 8fc4:2q (2.45) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    806490 8fc4:2r (2.45) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    806491 8fc4:2s (2.45) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    806492 8fc4:2t (2.45) BS01 rna ? GO:0003723 ... P80380 37452045
    806493 8fc4:2y (2.45) BS01 rna ? GO:0005515 ... P0AD49 37452045
    806494 8fc5:10 (2.65) BS01 rna ? GO:0003735 ... P60493 37452045
    806495 8fc5:10 (2.65) BS02 rna ? GO:0003735 ... P60493 37452045
    806496 8fc5:10 (2.65) BS03 MG ? GO:0003735 ... P60493 37452045
    806497 8fc5:10 (2.65) BS04 MG ? GO:0003735 ... P60493 37452045
    806498 8fc5:10 (2.65) BS05 MG ? GO:0003735 ... P60493 37452045
    806499 8fc5:11 (2.65) BS01 rna ? GO:0003735 ... P60494 37452045
    806500 8fc5:11 (2.65) BS02 MG ? GO:0003735 ... P60494 37452045
    806501 8fc5:12 (2.65) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    806502 8fc5:13 (2.65) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    806503 8fc5:13 (2.65) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    806504 8fc5:13 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37452045
    806505 8fc5:13 (2.65) BS04 MG ? GO:0003735 ... Q5SHQ6 37452045
    806506 8fc5:14 (2.65) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    806507 8fc5:14 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    806508 8fc5:15 (2.65) BS01 rna ? GO:0003735 ... P80339 37452045
    806509 8fc5:15 (2.65) BS02 MG ? GO:0003735 ... P80339 37452045
    806510 8fc5:15 (2.65) BS03 MG ? GO:0003735 ... P80339 37452045
    806511 8fc5:15 (2.65) BS04 ZN ? GO:0003735 ... P80339 37452045
    806512 8fc5:16 (2.65) BS01 rna ? GO:0003735 ... P35871 37452045
    806513 8fc5:16 (2.65) BS02 ZN ? GO:0003735 ... P35871 37452045
    806514 8fc5:17 (2.65) BS01 rna ? GO:0003735 ... P80340 37452045
    806515 8fc5:17 (2.65) BS02 MG ? GO:0003735 ... P80340 37452045
    806516 8fc5:17 (2.65) BS03 MG ? GO:0003735 ... P80340 37452045
    806517 8fc5:17 (2.65) BS04 MG ? GO:0003735 ... P80340 37452045
    806518 8fc5:17 (2.65) BS05 MG ? GO:0003735 ... P80340 37452045
    806519 8fc5:18 (2.65) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    806520 8fc5:18 (2.65) BS02 MG ? GO:0003735 ... Q5SKU1 37452045
    806521 8fc5:18 (2.65) BS03 MG ? GO:0003735 ... Q5SKU1 37452045
    806522 8fc5:19 (2.65) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    806523 8fc5:19 (2.65) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    806524 8fc5:1D (2.65) BS01 rna ? GO:0002181 ... P60405 37452045
    806525 8fc5:1D (2.65) BS02 rna ? GO:0002181 ... P60405 37452045
    806526 8fc5:1D (2.65) BS03 MG ? GO:0002181 ... P60405 37452045
    806527 8fc5:1D (2.65) BS04 MG ? GO:0002181 ... P60405 37452045
    806528 8fc5:1D (2.65) BS05 MG ? GO:0002181 ... P60405 37452045
    806529 8fc5:1D (2.65) BS06 MG ? GO:0002181 ... P60405 37452045
    806530 8fc5:1D (2.65) BS07 MG ? GO:0002181 ... P60405 37452045
    806531 8fc5:1D (2.65) BS08 MG ? GO:0002181 ... P60405 37452045
    806532 8fc5:1D (2.65) BS09 MG ? GO:0002181 ... P60405 37452045
    806533 8fc5:1D (2.65) BS10 MG ? GO:0002181 ... P60405 37452045
    806534 8fc5:1D (2.65) BS11 MG ? GO:0002181 ... P60405 37452045
    806535 8fc5:1D (2.65) BS12 MG ? GO:0002181 ... P60405 37452045
    806536 8fc5:1E (2.65) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    806537 8fc5:1E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    806538 8fc5:1E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    806539 8fc5:1E (2.65) BS04 MG ? GO:0003735 ... Q5SHN8 37452045
    806540 8fc5:1E (2.65) BS05 MG ? GO:0003735 ... Q5SHN8 37452045
    806541 8fc5:1F (2.65) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    806542 8fc5:1F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    806543 8fc5:1F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    806544 8fc5:1F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    806545 8fc5:1F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    806546 8fc5:1F (2.65) BS06 MG ? GO:0003735 ... Q5SHN9 37452045
    806547 8fc5:1F (2.65) BS07 MG ? GO:0003735 ... Q5SHN9 37452045
    806548 8fc5:1F (2.65) BS08 MG ? GO:0003735 ... Q5SHN9 37452045
    806549 8fc5:1F (2.65) BS09 MG ? GO:0003735 ... Q5SHN9 37452045
    806550 8fc5:1F (2.65) BS10 MG ? GO:0003735 ... Q5SHN9 37452045
    806551 8fc5:1F (2.65) BS11 MG ? GO:0003735 ... Q5SHN9 37452045
    806552 8fc5:1F (2.65) BS12 MG ? GO:0003735 ... Q5SHN9 37452045
    806553 8fc5:1F (2.65) BS13 MG ? GO:0003735 ... Q5SHN9 37452045
    806554 8fc5:1F (2.65) BS14 MG ? GO:0003735 ... Q5SHN9 37452045
    806555 8fc5:1F (2.65) BS15 MG ? GO:0003735 ... Q5SHN9 37452045
    806556 8fc5:1F (2.65) BS16 ARG ? GO:0003735 ... Q5SHN9 37452045
    806557 8fc5:1G (2.65) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    806558 8fc5:1G (2.65) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    806559 8fc5:1G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    806560 8fc5:1G (2.65) BS04 MG ? GO:0000049 ... Q5SHQ0 37452045
    806561 8fc5:1H (2.65) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    806562 8fc5:1I (2.65) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    806563 8fc5:1N (2.65) BS01 rna ? GO:0003729 ... P60488 37452045
    806564 8fc5:1N (2.65) BS02 MG ? GO:0003729 ... P60488 37452045
    806565 8fc5:1N (2.65) BS03 MG ? GO:0003729 ... P60488 37452045
    806566 8fc5:1O (2.65) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    806567 8fc5:1O (2.65) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    806568 8fc5:1P (2.65) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    806569 8fc5:1P (2.65) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    806570 8fc5:1P (2.65) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    806571 8fc5:1P (2.65) BS04 MG ? GO:0003735 ... Q5SHQ7 37452045
    806572 8fc5:1Q (2.65) BS01 rna ? GO:0003735 ... P60489 37452045
    806573 8fc5:1Q (2.65) BS02 rna ? GO:0003735 ... P60489 37452045
    806574 8fc5:1Q (2.65) BS03 MG ? GO:0003735 ... P60489 37452045
    806575 8fc5:1Q (2.65) BS04 MG ? GO:0003735 ... P60489 37452045
    806576 8fc5:1Q (2.65) BS05 MG ? GO:0003735 ... P60489 37452045
    806577 8fc5:1R (2.65) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    806578 8fc5:1R (2.65) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    806579 8fc5:1R (2.65) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    806580 8fc5:1R (2.65) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    806581 8fc5:1R (2.65) BS05 MG ? GO:0003735 ... Q9Z9H5 37452045
    806582 8fc5:1S (2.65) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    806583 8fc5:1S (2.65) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    806584 8fc5:1T (2.65) BS01 rna ? GO:0003735 ... P60490 37452045
    806585 8fc5:1T (2.65) BS02 rna ? GO:0003735 ... P60490 37452045
    806586 8fc5:1T (2.65) BS03 MG ? GO:0003735 ... P60490 37452045
    806587 8fc5:1U (2.65) BS01 rna ? GO:0000027 ... P60491 37452045
    806588 8fc5:1U (2.65) BS02 MG ? GO:0000027 ... P60491 37452045
    806589 8fc5:1U (2.65) BS03 MG ? GO:0000027 ... P60491 37452045
    806590 8fc5:1U (2.65) BS04 MG ? GO:0000027 ... P60491 37452045
    806591 8fc5:1U (2.65) BS05 MG ? GO:0000027 ... P60491 37452045
    806592 8fc5:1U (2.65) BS06 MG ? GO:0000027 ... P60491 37452045
    806593 8fc5:1U (2.65) BS07 MG ? GO:0000027 ... P60491 37452045
    806594 8fc5:1V (2.65) BS01 rna ? GO:0003723 ... P60492 37452045
    806595 8fc5:1V (2.65) BS02 MG ? GO:0003723 ... P60492 37452045
    806596 8fc5:1V (2.65) BS03 MG ? GO:0003723 ... P60492 37452045
    806597 8fc5:1V (2.65) BS04 MG ? GO:0003723 ... P60492 37452045
    806598 8fc5:1W (2.65) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    806599 8fc5:1W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    806600 8fc5:1X (2.65) BS01 rna ? GO:0003735 ... Q5SHP0 37452045

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).