SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    806801 8fc6:1O (2.35) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    806802 8fc6:1O (2.35) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    806803 8fc6:1P (2.35) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    806804 8fc6:1P (2.35) BS02 MG ? GO:0003735 ... Q5SHQ7 37452045
    806805 8fc6:1P (2.35) BS03 MG ? GO:0003735 ... Q5SHQ7 37452045
    806806 8fc6:1Q (2.35) BS01 rna ? GO:0003735 ... P60489 37452045
    806807 8fc6:1Q (2.35) BS02 rna ? GO:0003735 ... P60489 37452045
    806808 8fc6:1Q (2.35) BS03 MG ? GO:0003735 ... P60489 37452045
    806809 8fc6:1Q (2.35) BS04 MG ? GO:0003735 ... P60489 37452045
    806810 8fc6:1Q (2.35) BS05 MG ? GO:0003735 ... P60489 37452045
    806811 8fc6:1Q (2.35) BS06 MG ? GO:0003735 ... P60489 37452045
    806812 8fc6:1Q (2.35) BS07 MG ? GO:0003735 ... P60489 37452045
    806813 8fc6:1R (2.35) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    806814 8fc6:1R (2.35) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    806815 8fc6:1R (2.35) BS03 MG ? GO:0003735 ... Q9Z9H5 37452045
    806816 8fc6:1R (2.35) BS04 MG ? GO:0003735 ... Q9Z9H5 37452045
    806817 8fc6:1S (2.35) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    806818 8fc6:1S (2.35) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    806819 8fc6:1T (2.35) BS01 rna ? GO:0003735 ... P60490 37452045
    806820 8fc6:1T (2.35) BS02 rna ? GO:0003735 ... P60490 37452045
    806821 8fc6:1U (2.35) BS01 rna ? GO:0000027 ... P60491 37452045
    806822 8fc6:1U (2.35) BS02 MG ? GO:0000027 ... P60491 37452045
    806823 8fc6:1U (2.35) BS03 MG ? GO:0000027 ... P60491 37452045
    806824 8fc6:1U (2.35) BS04 MG ? GO:0000027 ... P60491 37452045
    806825 8fc6:1U (2.35) BS05 MG ? GO:0000027 ... P60491 37452045
    806826 8fc6:1U (2.35) BS06 MG ? GO:0000027 ... P60491 37452045
    806827 8fc6:1U (2.35) BS07 MG ? GO:0000027 ... P60491 37452045
    806828 8fc6:1V (2.35) BS01 rna ? GO:0003723 ... P60492 37452045
    806829 8fc6:1V (2.35) BS02 MG ? GO:0003723 ... P60492 37452045
    806830 8fc6:1V (2.35) BS03 MG ? GO:0003723 ... P60492 37452045
    806831 8fc6:1V (2.35) BS04 MG ? GO:0003723 ... P60492 37452045
    806832 8fc6:1W (2.35) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    806833 8fc6:1W (2.35) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    806834 8fc6:1W (2.35) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    806835 8fc6:1X (2.35) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    806836 8fc6:1Y (2.35) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    806837 8fc6:1Y (2.35) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    806838 8fc6:1Z (2.35) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    806839 8fc6:1Z (2.35) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    806840 8fc6:1b (2.35) BS01 rna ? GO:0003735 ... P80371 37452045
    806841 8fc6:1b (2.35) BS02 MG ? GO:0003735 ... P80371 37452045
    806842 8fc6:1c (2.35) BS01 rna ? GO:0003676 ... P80372 37452045
    806843 8fc6:1d (2.35) BS01 rna ? GO:0003723 ... P80373 37452045
    806844 8fc6:1d (2.35) BS02 SF4 ? GO:0003723 ... P80373 37452045
    806845 8fc6:1e (2.35) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    806846 8fc6:1e (2.35) BS02 MG ? GO:0003723 ... Q5SHQ5 37452045
    806847 8fc6:1f (2.35) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    806848 8fc6:1g (2.35) BS01 rna ? GO:0000049 ... P17291 37452045
    806849 8fc6:1h (2.35) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    806850 8fc6:1i (2.35) BS01 rna ? GO:0003723 ... P80374 37452045
    806851 8fc6:1j (2.35) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    806852 8fc6:1k (2.35) BS01 rna ? GO:0003735 ... P80376 37452045
    806853 8fc6:1k (2.35) BS02 MG ? GO:0003735 ... P80376 37452045
    806854 8fc6:1l (2.35) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    806855 8fc6:1l (2.35) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    806856 8fc6:1m (2.35) BS01 rna ? GO:0000049 ... P80377 37452045
    806857 8fc6:1m (2.35) BS02 MG ? GO:0000049 ... P80377 37452045
    806858 8fc6:1n (2.35) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    806859 8fc6:1n (2.35) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    806860 8fc6:1o (2.35) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    806861 8fc6:1o (2.35) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    806862 8fc6:1p (2.35) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    806863 8fc6:1q (2.35) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    806864 8fc6:1r (2.35) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    806865 8fc6:1s (2.35) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    806866 8fc6:1t (2.35) BS01 rna ? GO:0003723 ... P80380 37452045
    806867 8fc6:1t (2.35) BS02 MG ? GO:0003723 ... P80380 37452045
    806868 8fc6:1y (2.35) BS01 rna ? GO:0005515 ... P0AD49 37452045
    806869 8fc6:1y (2.35) BS02 MG ? GO:0005515 ... P0AD49 37452045
    806870 8fc6:1y (2.35) BS03 MG ? GO:0005515 ... P0AD49 37452045
    806871 8fc6:20 (2.35) BS01 rna ? GO:0003735 ... P60493 37452045
    806872 8fc6:20 (2.35) BS02 rna ? GO:0003735 ... P60493 37452045
    806873 8fc6:21 (2.35) BS01 rna ? GO:0003735 ... P60494 37452045
    806874 8fc6:22 (2.35) BS01 rna ? GO:0003735 ... Q5SHP6 37452045
    806875 8fc6:23 (2.35) BS01 rna ? GO:0003735 ... Q5SHQ6 37452045
    806876 8fc6:23 (2.35) BS02 rna ? GO:0003735 ... Q5SHQ6 37452045
    806877 8fc6:24 (2.35) BS01 rna ? GO:0003735 ... Q5SJE1 37452045
    806878 8fc6:24 (2.35) BS02 ZN ? GO:0003735 ... Q5SJE1 37452045
    806879 8fc6:25 (2.35) BS01 rna ? GO:0003735 ... P80339 37452045
    806880 8fc6:25 (2.35) BS02 MG ? GO:0003735 ... P80339 37452045
    806881 8fc6:25 (2.35) BS03 MG ? GO:0003735 ... P80339 37452045
    806882 8fc6:25 (2.35) BS04 ZN ? GO:0003735 ... P80339 37452045
    806883 8fc6:26 (2.35) BS01 rna ? GO:0003735 ... P35871 37452045
    806884 8fc6:26 (2.35) BS02 ZN ? GO:0003735 ... P35871 37452045
    806885 8fc6:27 (2.35) BS01 rna ? GO:0003735 ... P80340 37452045
    806886 8fc6:27 (2.35) BS02 MG ? GO:0003735 ... P80340 37452045
    806887 8fc6:27 (2.35) BS03 MG ? GO:0003735 ... P80340 37452045
    806888 8fc6:28 (2.35) BS01 rna ? GO:0003735 ... Q5SKU1 37452045
    806889 8fc6:29 (2.35) BS01 rna ? GO:0003735 ... Q5SHR2 37452045
    806890 8fc6:29 (2.35) BS02 ZN ? GO:0003735 ... Q5SHR2 37452045
    806891 8fc6:2D (2.35) BS01 rna ? GO:0002181 ... P60405 37452045
    806892 8fc6:2D (2.35) BS02 rna ? GO:0002181 ... P60405 37452045
    806893 8fc6:2D (2.35) BS03 MG ? GO:0002181 ... P60405 37452045
    806894 8fc6:2D (2.35) BS04 MG ? GO:0002181 ... P60405 37452045
    806895 8fc6:2D (2.35) BS05 MG ? GO:0002181 ... P60405 37452045
    806896 8fc6:2D (2.35) BS06 MG ? GO:0002181 ... P60405 37452045
    806897 8fc6:2D (2.35) BS07 MG ? GO:0002181 ... P60405 37452045
    806898 8fc6:2D (2.35) BS08 MG ? GO:0002181 ... P60405 37452045
    806899 8fc6:2D (2.35) BS09 MG ? GO:0002181 ... P60405 37452045
    806900 8fc6:2E (2.35) BS01 rna ? GO:0003735 ... Q5SHN8 37452045
    806901 8fc6:2E (2.35) BS02 MG ? GO:0003735 ... Q5SHN8 37452045
    806902 8fc6:2E (2.35) BS03 MG ? GO:0003735 ... Q5SHN8 37452045
    806903 8fc6:2F (2.35) BS01 rna ? GO:0003735 ... Q5SHN9 37452045
    806904 8fc6:2F (2.35) BS02 MG ? GO:0003735 ... Q5SHN9 37452045
    806905 8fc6:2F (2.35) BS03 MG ? GO:0003735 ... Q5SHN9 37452045
    806906 8fc6:2F (2.35) BS04 MG ? GO:0003735 ... Q5SHN9 37452045
    806907 8fc6:2F (2.35) BS05 MG ? GO:0003735 ... Q5SHN9 37452045
    806908 8fc6:2G (2.35) BS01 rna ? GO:0000049 ... Q5SHQ0 37452045
    806909 8fc6:2G (2.35) BS02 rna ? GO:0000049 ... Q5SHQ0 37452045
    806910 8fc6:2G (2.35) BS03 MG ? GO:0000049 ... Q5SHQ0 37452045
    806911 8fc6:2H (2.35) BS01 rna ? GO:0002181 ... P0DOY8 37452045
    806912 8fc6:2I (2.35) BS01 rna ? GO:0003735 ... Q5SLQ1 37452045
    806913 8fc6:2N (2.35) BS01 rna ? GO:0003729 ... P60488 37452045
    806914 8fc6:2O (2.35) BS01 rna ? GO:0003735 ... Q5SHP8 37452045
    806915 8fc6:2O (2.35) BS02 rna ? GO:0003735 ... Q5SHP8 37452045
    806916 8fc6:2P (2.35) BS01 rna ? GO:0003735 ... Q5SHQ7 37452045
    806917 8fc6:2Q (2.35) BS01 rna ? GO:0003735 ... P60489 37452045
    806918 8fc6:2Q (2.35) BS02 rna ? GO:0003735 ... P60489 37452045
    806919 8fc6:2Q (2.35) BS03 MG ? GO:0003735 ... P60489 37452045
    806920 8fc6:2Q (2.35) BS04 MG ? GO:0003735 ... P60489 37452045
    806921 8fc6:2R (2.35) BS01 rna ? GO:0003735 ... Q9Z9H5 37452045
    806922 8fc6:2R (2.35) BS02 MG ? GO:0003735 ... Q9Z9H5 37452045
    806923 8fc6:2S (2.35) BS01 rna ? GO:0003735 ... Q5SHQ4 37452045
    806924 8fc6:2S (2.35) BS02 rna ? GO:0003735 ... Q5SHQ4 37452045
    806925 8fc6:2T (2.35) BS01 rna ? GO:0003735 ... P60490 37452045
    806926 8fc6:2T (2.35) BS02 rna ? GO:0003735 ... P60490 37452045
    806927 8fc6:2U (2.35) BS01 rna ? GO:0000027 ... P60491 37452045
    806928 8fc6:2U (2.35) BS02 MG ? GO:0000027 ... P60491 37452045
    806929 8fc6:2V (2.35) BS01 rna ? GO:0003723 ... P60492 37452045
    806930 8fc6:2V (2.35) BS02 MG ? GO:0003723 ... P60492 37452045
    806931 8fc6:2V (2.35) BS03 MG ? GO:0003723 ... P60492 37452045
    806932 8fc6:2W (2.35) BS01 rna ? GO:0003735 ... Q5SHP3 37452045
    806933 8fc6:2W (2.35) BS02 MG ? GO:0003735 ... Q5SHP3 37452045
    806934 8fc6:2W (2.35) BS03 MG ? GO:0003735 ... Q5SHP3 37452045
    806935 8fc6:2X (2.35) BS01 rna ? GO:0003735 ... Q5SHP0 37452045
    806936 8fc6:2Y (2.35) BS01 rna ? GO:0003723 ... Q5SHP9 37452045
    806937 8fc6:2Y (2.35) BS02 ZN ? GO:0003723 ... Q5SHP9 37452045
    806938 8fc6:2Z (2.35) BS01 rna ? GO:0003723 ... Q5SHZ1 37452045
    806939 8fc6:2Z (2.35) BS02 rna ? GO:0003723 ... Q5SHZ1 37452045
    806940 8fc6:2b (2.35) BS01 rna ? GO:0003735 ... P80371 37452045
    806941 8fc6:2c (2.35) BS01 rna ? GO:0003676 ... P80372 37452045
    806942 8fc6:2d (2.35) BS01 rna ? GO:0003723 ... P80373 37452045
    806943 8fc6:2d (2.35) BS02 SF4 ? GO:0003723 ... P80373 37452045
    806944 8fc6:2e (2.35) BS01 rna ? GO:0003723 ... Q5SHQ5 37452045
    806945 8fc6:2f (2.35) BS01 rna ? GO:0003735 ... Q5SLP8 37452045
    806946 8fc6:2f (2.35) BS02 MG ? GO:0003735 ... Q5SLP8 37452045
    806947 8fc6:2g (2.35) BS01 rna ? GO:0000049 ... P17291 37452045
    806948 8fc6:2h (2.35) BS01 rna ? GO:0003735 ... P0DOY9 37452045
    806949 8fc6:2i (2.35) BS01 rna ? GO:0003723 ... P80374 37452045
    806950 8fc6:2j (2.35) BS01 rna ? GO:0000049 ... Q5SHN7 37452045
    806951 8fc6:2k (2.35) BS01 rna ? GO:0003735 ... P80376 37452045
    806952 8fc6:2k (2.35) BS02 MG ? GO:0003735 ... P80376 37452045
    806953 8fc6:2l (2.35) BS01 rna ? GO:0000049 ... Q5SHN3 37452045
    806954 8fc6:2l (2.35) BS02 MG ? GO:0000049 ... Q5SHN3 37452045
    806955 8fc6:2m (2.35) BS01 rna ? GO:0000049 ... P80377 37452045
    806956 8fc6:2n (2.35) BS01 rna ? GO:0003735 ... P0DOY6 37452045
    806957 8fc6:2n (2.35) BS02 ZN ? GO:0003735 ... P0DOY6 37452045
    806958 8fc6:2o (2.35) BS01 rna ? GO:0003735 ... Q5SJ76 37452045
    806959 8fc6:2o (2.35) BS02 rna ? GO:0003735 ... Q5SJ76 37452045
    806960 8fc6:2p (2.35) BS01 rna ? GO:0003735 ... Q5SJH3 37452045
    806961 8fc6:2q (2.35) BS01 rna ? GO:0003735 ... P0DOY7 37452045
    806962 8fc6:2r (2.35) BS01 rna ? GO:0003735 ... Q5SLQ0 37452045
    806963 8fc6:2s (2.35) BS01 rna ? GO:0000028 ... Q5SHP2 37452045
    806964 8fc6:2t (2.35) BS01 rna ? GO:0003723 ... P80380 37452045
    806965 8fc6:2t (2.35) BS02 MG ? GO:0003723 ... P80380 37452045
    806966 8fc6:2y (2.35) BS01 rna ? GO:0005515 ... P0AD49 37452045
    806967 8fc7:A (3.3) BS01 XPW ? GO:0000122 ... Q9HBA0 37353484
    806968 8fc7:B (3.3) BS01 XPW ? GO:0000122 ... Q9HBA0 37353484
    806969 8fc7:C (3.3) BS01 XPW ? GO:0000122 ... Q9HBA0 37353484
    806970 8fc7:D (3.3) BS01 XPW ? GO:0000122 ... Q9HBA0 37353484
    806971 8fc7:E (3.3) BS01 MG 3.6.5.2 GO:0000281 ... P61586 37353484
    806972 8fc7:E (3.3) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 37353484
    806973 8fc7:F (3.3) BS01 MG 3.6.5.2 GO:0000281 ... P61586 37353484
    806974 8fc7:F (3.3) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 37353484
    806975 8fc7:G (3.3) BS01 MG 3.6.5.2 GO:0000281 ... P61586 37353484
    806976 8fc7:G (3.3) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 37353484
    806977 8fc7:H (3.3) BS01 MG 3.6.5.2 GO:0000281 ... P61586 37353484
    806978 8fc7:H (3.3) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 37353484
    806979 8fc8:A (3.47) BS01 XQ3 ? GO:0000122 ... Q9HBA0 37353484
    806980 8fc8:A (3.47) BS02 Y01 ? GO:0000122 ... Q9HBA0 37353484
    806981 8fc8:A (3.47) BS03 Y01 ? GO:0000122 ... Q9HBA0 37353484
    806982 8fc8:B (3.47) BS01 XQ3 ? GO:0000122 ... Q9HBA0 37353484
    806983 8fc8:B (3.47) BS02 Y01 ? GO:0000122 ... Q9HBA0 37353484
    806984 8fc8:B (3.47) BS03 Y01 ? GO:0000122 ... Q9HBA0 37353484
    806985 8fc8:C (3.47) BS01 Y01 ? GO:0000122 ... Q9HBA0 37353484
    806986 8fc8:C (3.47) BS02 XQ3 ? GO:0000122 ... Q9HBA0 37353484
    806987 8fc8:C (3.47) BS03 Y01 ? GO:0000122 ... Q9HBA0 37353484
    806988 8fc8:D (3.47) BS01 Y01 ? GO:0000122 ... Q9HBA0 37353484
    806989 8fc8:D (3.47) BS02 XQ3 ? GO:0000122 ... Q9HBA0 37353484
    806990 8fc8:D (3.47) BS03 Y01 ? GO:0000122 ... Q9HBA0 37353484
    806991 8fc9:E (3.75) BS01 MG 3.6.5.2 GO:0000281 ... P61586 37353484
    806992 8fc9:E (3.75) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 37353484
    806993 8fc9:F (3.75) BS01 MG 3.6.5.2 GO:0000281 ... P61586 37353484
    806994 8fc9:F (3.75) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 37353484
    806995 8fc9:G (3.75) BS01 MG 3.6.5.2 GO:0000281 ... P61586 37353484
    806996 8fc9:G (3.75) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 37353484
    806997 8fc9:H (3.75) BS01 MG 3.6.5.2 GO:0000281 ... P61586 37353484
    806998 8fc9:H (3.75) BS02 GDP 3.6.5.2 GO:0000281 ... P61586 37353484
    806999 8fca:A (3.41) BS01 XS9 ? GO:0000122 ... Q9HBA0 37353484
    807000 8fca:A (3.41) BS02 Y01 ? GO:0000122 ... Q9HBA0 37353484

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).