SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    806801 8fo3:K (2.0) BS01 Y4K N/A N/A N/A N/A
    806802 8fo3:L (2.0) BS01 Y4K N/A N/A N/A N/A
    806803 8fo4:A (2.0) BS01 Y4Q N/A N/A N/A N/A
    806804 8fo4:B (2.0) BS01 Y4Q N/A N/A N/A N/A
    806805 8fo4:C (2.0) BS01 Y4Q N/A N/A N/A N/A
    806806 8fo4:D (2.0) BS01 Y4Q N/A N/A N/A N/A
    806807 8fo5:A (1.89) BS01 Y4U N/A N/A N/A N/A
    806808 8fo5:B (1.89) BS01 Y4U N/A N/A N/A N/A
    806809 8fo5:C (1.89) BS01 Y4U N/A N/A N/A N/A
    806810 8fo5:D (1.89) BS01 Y4U N/A N/A N/A N/A
    806811 8fo6:A (2.553) BS01 ZN 2.7.11.20 GO:0004674 ... O00418 37068230
    806812 8fo6:B (2.553) BS01 CA ? GO:0000086 ... P0DP23 37068230
    806813 8fo6:B (2.553) BS02 CA ? GO:0000086 ... P0DP23 37068230
    806814 8fo7:C (3.52) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0004672 ... Q5S007 38263358
    806815 8fo7:C (3.52) BS02 4K4 2.7.11.1
    3.6.5.-
    GO:0004672 ... Q5S007 38263358
    806816 8fo8:C (3.88) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806817 8fo8:C (3.88) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806818 8fo8:E (3.88) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806819 8fo8:E (3.88) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806820 8fo9:A (3.48) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806821 8fo9:A (3.48) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806822 8fo9:C (3.48) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806823 8fo9:C (3.48) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806824 8fo9:E (3.48) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806825 8fo9:E (3.48) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806826 8fo9:F (3.48) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806827 8fo9:F (3.48) BS02 ATP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38127736
    806828 8foa:A (2.66) BS01 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806829 8foa:A (2.66) BS02 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806830 8foa:A (2.66) BS03 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806831 8foa:A (2.66) BS04 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806832 8foa:A (2.66) BS05 ZN ? GO:0005216 ... Q9H1D0 37160865
    806833 8foa:B (2.66) BS01 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806834 8foa:B (2.66) BS02 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806835 8foa:B (2.66) BS03 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806836 8foa:B (2.66) BS04 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806837 8foa:B (2.66) BS05 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806838 8foa:C (2.66) BS01 GEN ? GO:0005216 ... Q9H1D0 37160865
    806839 8foa:C (2.66) BS02 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806840 8foa:C (2.66) BS03 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806841 8foa:C (2.66) BS04 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806842 8foa:C (2.66) BS05 ZN ? GO:0005216 ... Q9H1D0 37160865
    806843 8foa:D (2.66) BS01 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806844 8foa:D (2.66) BS02 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806845 8foa:D (2.66) BS03 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806846 8foa:D (2.66) BS04 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806847 8foa:D (2.66) BS05 GEN ? GO:0005216 ... Q9H1D0 37160865
    806848 8fob:A (2.71) BS01 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806849 8fob:A (2.71) BS02 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806850 8fob:A (2.71) BS03 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806851 8fob:A (2.71) BS04 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806852 8fob:B (2.71) BS01 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806853 8fob:B (2.71) BS02 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806854 8fob:B (2.71) BS03 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806855 8fob:C (2.71) BS01 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806856 8fob:C (2.71) BS02 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806857 8fob:C (2.71) BS03 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806858 8fob:D (2.71) BS01 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806859 8fob:D (2.71) BS02 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806860 8fob:D (2.71) BS03 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806861 8fob:D (2.71) BS04 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806862 8fob:D (2.71) BS05 Y01 ? GO:0005216 ... Q9H1D0 37160865
    806863 8foc:B (3.7) BS01 SF4 ? GO:0003677 ... P20457 37344454
    806864 8fod:B (3.8) BS01 SF4 ? GO:0003677 ... P20457 37344454
    806865 8foe:B (5.6) BS01 SF4 ? GO:0003677 ... P20457 37344454
    806866 8fog:A (2.29) BS01 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    806867 8fog:A (2.29) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    806868 8fog:A (2.29) BS03 Y43 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    806869 8fog:A (2.29) BS04 CA 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    806870 8foh:B (4.6) BS01 dna ? GO:0003677 ... P20457 37344454
    806871 8foh:B (4.6) BS02 SF4 ? GO:0003677 ... P20457 37344454
    806872 8foi:A (2.5) BS01 PIO ? GO:0004888 ... P62812 37730991
    806873 8foi:A (2.5) BS02 Y4B ? GO:0004888 ... P62812 37730991
    806874 8foi:A (2.5) BS03 ABU ? GO:0004888 ... P62812 37730991
    806875 8foi:B (2.5) BS01 ABU ? GO:0004888 ... P63137 37730991
    806876 8foi:B (2.5) BS02 Y4B ? GO:0004888 ... P63137 37730991
    806877 8foi:C (2.5) BS01 ABU ? GO:0004888 ... P62812 37730991
    806878 8foi:C (2.5) BS02 Y4B ? GO:0004888 ... P62812 37730991
    806879 8foi:C (2.5) BS03 PIO ? GO:0004888 ... P62812 37730991
    806880 8foi:D (2.5) BS01 MAN ? GO:0004888 ... P22723 37730991
    806881 8foi:E (2.5) BS01 Y4B ? GO:0004888 ... P63137 37730991
    806882 8foi:E (2.5) BS02 ABU ? GO:0004888 ... P63137 37730991
    806883 8foj:B (4.8) BS01 dna ? GO:0003677 ... P20457 37344454
    806884 8foj:B (4.8) BS02 SF4 ? GO:0003677 ... P20457 37344454
    806885 8fok:1 (3.56) BS01 dna 2.7.7.7 GO:0000166 ... P13382 37344454
    806886 8fok:1 (3.56) BS02 rna 2.7.7.7 GO:0000166 ... P13382 37344454
    806887 8fok:B (3.56) BS01 dna ? GO:0003677 ... P20457 37344454
    806888 8fok:B (3.56) BS02 SF4 ? GO:0003677 ... P20457 37344454
    806889 8fol:A (2.65) BS01 SF4 1.97.1.4 GO:0003824 ... P0A9N4 37156396
    806890 8fol:A (2.65) BS02 SAM 1.97.1.4 GO:0003824 ... P0A9N4 37156396
    806891 8fom:QB (3.58) BS01 rna ? GO:0003735 ... P80371 36924943
    806892 8fom:QC (3.58) BS01 rna ? GO:0003676 ... P80372 36924943
    806893 8fom:QD (3.58) BS01 rna ? GO:0003723 ... P80373 36924943
    806894 8fom:QD (3.58) BS02 SF4 ? GO:0003723 ... P80373 36924943
    806895 8fom:QE (3.58) BS01 rna ? GO:0003723 ... Q5SHQ5 36924943
    806896 8fom:QF (3.58) BS01 rna ? GO:0003735 ... Q5SLP8 36924943
    806897 8fom:QG (3.58) BS01 rna ? GO:0000049 ... P17291 36924943
    806898 8fom:QH (3.58) BS01 rna ? GO:0003735 ... P0DOY9 36924943
    806899 8fom:QI (3.58) BS01 rna ? GO:0000049 ... P80374 36924943
    806900 8fom:QI (3.58) BS02 rna ? GO:0000049 ... P80374 36924943
    806901 8fom:QJ (3.58) BS01 rna ? GO:0000049 ... Q5SHN7 36924943
    806902 8fom:QK (3.58) BS01 rna ? GO:0003735 ... P80376 36924943
    806903 8fom:QL (3.58) BS01 rna ? GO:0000049 ... Q5SHN3 36924943
    806904 8fom:QM (3.58) BS01 rna ? GO:0000049 ... P80377 36924943
    806905 8fom:QN (3.58) BS01 rna ? GO:0003735 ... P0DOY6 36924943
    806906 8fom:QN (3.58) BS02 ZN ? GO:0003735 ... P0DOY6 36924943
    806907 8fom:QO (3.58) BS01 rna ? GO:0003735 ... Q5SJ76 36924943
    806908 8fom:QO (3.58) BS02 rna ? GO:0003735 ... Q5SJ76 36924943
    806909 8fom:QP (3.58) BS01 rna ? GO:0003735 ... Q5SJH3 36924943
    806910 8fom:QQ (3.58) BS01 rna ? GO:0003735 ... P0DOY7 36924943
    806911 8fom:QR (3.58) BS01 rna ? GO:0003735 ... Q5SLQ0 36924943
    806912 8fom:QS (3.58) BS01 rna ? GO:0000028 ... Q5SHP2 36924943
    806913 8fom:QT (3.58) BS01 rna ? GO:0003723 ... P80380 36924943
    806914 8fom:R0 (3.58) BS01 rna ? GO:0003735 ... P60493 36924943
    806915 8fom:R0 (3.58) BS02 rna ? GO:0003735 ... P60493 36924943
    806916 8fom:R0 (3.58) BS03 rna ? GO:0003735 ... P60493 36924943
    806917 8fom:R1 (3.58) BS01 rna ? GO:0003735 ... P60494 36924943
    806918 8fom:R2 (3.58) BS01 rna ? GO:0003735 ... Q5SHP6 36924943
    806919 8fom:R3 (3.58) BS01 rna ? GO:0003735 ... Q5SHQ6 36924943
    806920 8fom:R3 (3.58) BS02 rna ? GO:0003735 ... Q5SHQ6 36924943
    806921 8fom:R4 (3.58) BS01 rna ? GO:0003735 ... Q5SJE1 36924943
    806922 8fom:R4 (3.58) BS02 rna ? GO:0003735 ... Q5SJE1 36924943
    806923 8fom:R5 (3.58) BS01 rna ? GO:0003735 ... P80339 36924943
    806924 8fom:R6 (3.58) BS01 rna ? GO:0000049 ... P35871 36924943
    806925 8fom:R7 (3.58) BS01 rna ? GO:0003735 ... P80340 36924943
    806926 8fom:R8 (3.58) BS01 rna ? GO:0003735 ... Q5SKU1 36924943
    806927 8fom:R9 (3.58) BS01 rna ? GO:0003735 ... Q5SHR2 36924943
    806928 8fom:RD (3.58) BS01 rna ? GO:0002181 ... P60405 36924943
    806929 8fom:RD (3.58) BS02 rna ? GO:0002181 ... P60405 36924943
    806930 8fom:RE (3.58) BS01 rna ? GO:0003735 ... Q5SHN8 36924943
    806931 8fom:RF (3.58) BS01 rna ? GO:0003735 ... Q5SHN9 36924943
    806932 8fom:RG (3.58) BS01 rna ? GO:0000049 ... Q5SHQ0 36924943
    806933 8fom:RG (3.58) BS02 rna ? GO:0000049 ... Q5SHQ0 36924943
    806934 8fom:RG (3.58) BS03 rna ? GO:0000049 ... Q5SHQ0 36924943
    806935 8fom:RH (3.58) BS01 rna ? GO:0002181 ... P0DOY8 36924943
    806936 8fom:RI (3.58) BS01 rna ? GO:0003735 ... Q5SLQ1 36924943
    806937 8fom:RN (3.58) BS01 rna ? GO:0003729 ... P60488 36924943
    806938 8fom:RO (3.58) BS01 rna ? GO:0003735 ... Q5SHP8 36924943
    806939 8fom:RO (3.58) BS02 rna ? GO:0003735 ... Q5SHP8 36924943
    806940 8fom:RP (3.58) BS01 rna ? GO:0003735 ... Q5SHQ7 36924943
    806941 8fom:RQ (3.58) BS01 rna ? GO:0000049 ... P60489 36924943
    806942 8fom:RQ (3.58) BS02 rna ? GO:0000049 ... P60489 36924943
    806943 8fom:RR (3.58) BS01 rna ? GO:0003735 ... Q9Z9H5 36924943
    806944 8fom:RS (3.58) BS01 rna ? GO:0003735 ... Q5SHQ4 36924943
    806945 8fom:RS (3.58) BS02 rna ? GO:0003735 ... Q5SHQ4 36924943
    806946 8fom:RT (3.58) BS01 rna ? GO:0003735 ... P60490 36924943
    806947 8fom:RT (3.58) BS02 rna ? GO:0003735 ... P60490 36924943
    806948 8fom:RU (3.58) BS01 rna ? GO:0000027 ... P60491 36924943
    806949 8fom:RV (3.58) BS01 rna ? GO:0003723 ... P60492 36924943
    806950 8fom:RW (3.58) BS01 rna ? GO:0003735 ... Q5SHP3 36924943
    806951 8fom:RX (3.58) BS01 rna ? GO:0003735 ... Q5SHP0 36924943
    806952 8fom:RY (3.58) BS01 rna ? GO:0003723 ... Q5SHP9 36924943
    806953 8fom:RZ (3.58) BS01 rna ? GO:0003723 ... Q5SHZ1 36924943
    806954 8fom:RZ (3.58) BS02 rna ? GO:0003723 ... Q5SHZ1 36924943
    806955 8fom:XB (3.58) BS01 rna ? GO:0003735 ... P80371 36924943
    806956 8fom:XC (3.58) BS01 rna ? GO:0003676 ... P80372 36924943
    806957 8fom:XD (3.58) BS01 rna ? GO:0003723 ... P80373 36924943
    806958 8fom:XD (3.58) BS02 SF4 ? GO:0003723 ... P80373 36924943
    806959 8fom:XE (3.58) BS01 rna ? GO:0003723 ... Q5SHQ5 36924943
    806960 8fom:XF (3.58) BS01 rna ? GO:0003735 ... Q5SLP8 36924943
    806961 8fom:XG (3.58) BS01 rna ? GO:0000049 ... P17291 36924943
    806962 8fom:XH (3.58) BS01 rna ? GO:0003735 ... P0DOY9 36924943
    806963 8fom:XI (3.58) BS01 rna ? GO:0000049 ... P80374 36924943
    806964 8fom:XI (3.58) BS02 rna ? GO:0000049 ... P80374 36924943
    806965 8fom:XJ (3.58) BS01 rna ? GO:0000049 ... Q5SHN7 36924943
    806966 8fom:XK (3.58) BS01 rna ? GO:0003735 ... P80376 36924943
    806967 8fom:XL (3.58) BS01 rna ? GO:0000049 ... Q5SHN3 36924943
    806968 8fom:XM (3.58) BS01 rna ? GO:0000049 ... P80377 36924943
    806969 8fom:XM (3.58) BS02 rna ? GO:0000049 ... P80377 36924943
    806970 8fom:XN (3.58) BS01 rna ? GO:0003735 ... P0DOY6 36924943
    806971 8fom:XN (3.58) BS02 ZN ? GO:0003735 ... P0DOY6 36924943
    806972 8fom:XO (3.58) BS01 rna ? GO:0003735 ... Q5SJ76 36924943
    806973 8fom:XO (3.58) BS02 rna ? GO:0003735 ... Q5SJ76 36924943
    806974 8fom:XP (3.58) BS01 rna ? GO:0003735 ... Q5SJH3 36924943
    806975 8fom:XQ (3.58) BS01 rna ? GO:0003735 ... P0DOY7 36924943
    806976 8fom:XR (3.58) BS01 rna ? GO:0003735 ... Q5SLQ0 36924943
    806977 8fom:XS (3.58) BS01 rna ? GO:0000028 ... Q5SHP2 36924943
    806978 8fom:XT (3.58) BS01 rna ? GO:0003723 ... P80380 36924943
    806979 8fom:Y0 (3.58) BS01 rna ? GO:0003735 ... P60493 36924943
    806980 8fom:Y0 (3.58) BS02 rna ? GO:0003735 ... P60493 36924943
    806981 8fom:Y0 (3.58) BS03 rna ? GO:0003735 ... P60493 36924943
    806982 8fom:Y1 (3.58) BS01 rna ? GO:0003735 ... P60494 36924943
    806983 8fom:Y2 (3.58) BS01 rna ? GO:0003735 ... Q5SHP6 36924943
    806984 8fom:Y3 (3.58) BS01 rna ? GO:0003735 ... Q5SHQ6 36924943
    806985 8fom:Y3 (3.58) BS02 rna ? GO:0003735 ... Q5SHQ6 36924943
    806986 8fom:Y4 (3.58) BS01 rna ? GO:0003735 ... Q5SJE1 36924943
    806987 8fom:Y4 (3.58) BS02 rna ? GO:0003735 ... Q5SJE1 36924943
    806988 8fom:Y5 (3.58) BS01 rna ? GO:0003735 ... P80339 36924943
    806989 8fom:Y6 (3.58) BS01 rna ? GO:0000049 ... P35871 36924943
    806990 8fom:Y7 (3.58) BS01 rna ? GO:0003735 ... P80340 36924943
    806991 8fom:Y8 (3.58) BS01 rna ? GO:0003735 ... Q5SKU1 36924943
    806992 8fom:Y9 (3.58) BS01 rna ? GO:0003735 ... Q5SHR2 36924943
    806993 8fom:YD (3.58) BS01 rna ? GO:0002181 ... P60405 36924943
    806994 8fom:YD (3.58) BS02 rna ? GO:0002181 ... P60405 36924943
    806995 8fom:YE (3.58) BS01 rna ? GO:0003735 ... Q5SHN8 36924943
    806996 8fom:YF (3.58) BS01 rna ? GO:0003735 ... Q5SHN9 36924943
    806997 8fom:YG (3.58) BS01 rna ? GO:0000049 ... Q5SHQ0 36924943
    806998 8fom:YG (3.58) BS02 rna ? GO:0000049 ... Q5SHQ0 36924943
    806999 8fom:YG (3.58) BS03 rna ? GO:0000049 ... Q5SHQ0 36924943
    807000 8fom:YH (3.58) BS01 rna ? GO:0002181 ... P0DOY8 36924943

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).