SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    807201 8foz:G (2.0) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    807202 8foz:G (2.0) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    807203 8foz:H (2.0) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    807204 8foz:H (2.0) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    807205 8fp0:A (1.6) BS01 RRC 2.7.11.22 GO:0000082 ... P24941 37270540
    807206 8fp0:A (1.6) BS02 7TW 2.7.11.22 GO:0000082 ... P24941 37270540
    807207 8fp1:A (1.85) BS01 XXF 2.7.11.13 GO:0004672 ... P24723 36940470
    807208 8fp3:A (2.3) BS01 Y3I 2.7.11.13 GO:0004672 ... P24723 36940470
    807209 8fp5:A (1.7) BS01 ATP 2.7.11.22 GO:0000082 ... P24941 37270540
    807210 8fp5:A (1.7) BS02 MG 2.7.11.22 GO:0000082 ... P24941 37270540
    807211 8fpc:A (2.78) BS01 GLU ? GO:0005216 ... P19491 38409505
    807212 8fpc:A (2.78) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807213 8fpc:A (2.78) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807214 8fpc:B (2.78) BS01 GLU ? GO:0005216 ... P19491 38409505
    807215 8fpc:B (2.78) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807216 8fpc:B (2.78) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807217 8fpc:C (2.78) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807218 8fpc:C (2.78) BS02 GLU ? GO:0005216 ... P19491 38409505
    807219 8fpc:C (2.78) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807220 8fpc:D (2.78) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807221 8fpc:D (2.78) BS02 GLU ? GO:0005216 ... P19491 38409505
    807222 8fpc:D (2.78) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807223 8fpe:A (2.3) BS01 Y5B ? GO:0003677 ... O75469 36848571
    807224 8fpf:C (3.27) BS01 ATP 7.6.2.- GO:0005524 ... O07550 37938578
    807225 8fpf:D (3.27) BS01 ATP 7.6.2.- GO:0005524 ... O07549 37938578
    807226 8fph:A (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807227 8fph:A (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807228 8fph:A (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807229 8fph:B (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807230 8fph:B (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807231 8fph:B (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807232 8fph:C (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807233 8fph:C (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    807234 8fph:C (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807235 8fph:D (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807236 8fph:D (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    807237 8fph:D (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807238 8fpi:A (2.52) BS01 Y6L 2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0003968 ... P28887 37337079
    807239 8fpj:A (2.74) BS01 Y6L 2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... Q6WB93 37337079
    807240 8fpk:A (2.76) BS01 Y4Y ? GO:0005216 ... P19491 38409505
    807241 8fpk:A (2.76) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807242 8fpk:A (2.76) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807243 8fpk:B (2.76) BS01 Y4Y ? GO:0005216 ... P19491 38409505
    807244 8fpk:B (2.76) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807245 8fpk:B (2.76) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807246 8fpk:C (2.76) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807247 8fpk:C (2.76) BS02 Y4Y ? GO:0005216 ... P19491 38409505
    807248 8fpk:C (2.76) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807249 8fpk:D (2.76) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807250 8fpk:D (2.76) BS02 Y4Y ? GO:0005216 ... P19491 38409505
    807251 8fpk:D (2.76) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807252 8fpl:A (2.81) BS01 Y4Y ? GO:0005216 ... P19491 38409505
    807253 8fpl:A (2.81) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807254 8fpl:A (2.81) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807255 8fpl:B (2.81) BS01 Y4Y ? GO:0005216 ... P19491 38409505
    807256 8fpl:B (2.81) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807257 8fpl:B (2.81) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807258 8fpl:C (2.81) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807259 8fpl:C (2.81) BS02 Y4Y ? GO:0005216 ... P19491 38409505
    807260 8fpl:C (2.81) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807261 8fpl:D (2.81) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807262 8fpl:D (2.81) BS02 Y4Y ? GO:0005216 ... P19491 38409505
    807263 8fpl:D (2.81) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807264 8fpo:A (2.997) BS01 peptide N/A N/A Q8NBP7 N/A
    807265 8fpo:B (2.997) BS01 peptide N/A N/A Q8NBP7 N/A
    807266 8fpq:A (2.503) BS01 peptide N/A N/A Q8NBP7 N/A
    807267 8fpq:B (2.503) BS01 peptide N/A N/A Q8NBP7 N/A
    807268 8fpq:B (2.503) BS02 CA N/A N/A Q8NBP7 N/A
    807269 8fpv:A (3.08) BS01 GLU ? GO:0005216 ... P19491 38409505
    807270 8fpv:A (3.08) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807271 8fpv:A (3.08) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807272 8fpv:B (3.08) BS01 GLU ? GO:0005216 ... P19491 38409505
    807273 8fpv:B (3.08) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807274 8fpv:B (3.08) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807275 8fpv:C (3.08) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807276 8fpv:C (3.08) BS02 GLU ? GO:0005216 ... P19491 38409505
    807277 8fpv:C (3.08) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807278 8fpv:D (3.08) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807279 8fpv:D (3.08) BS02 GLU ? GO:0005216 ... P19491 38409505
    807280 8fpv:D (3.08) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807281 8fpw:A (1.4) BS01 GDP 3.6.5.2 GO:0000902 ... P61586 39169042
    807282 8fpw:A (1.4) BS02 MG 3.6.5.2 GO:0000902 ... P61586 39169042
    807283 8fpx:A (1.47) BS01 GDP 3.6.5.2 GO:0000902 ... P61586 39169042
    807284 8fpx:A (1.47) BS02 MG 3.6.5.2 GO:0000902 ... P61586 39169042
    807285 8fpy:A (2.98) BS01 GLU ? GO:0005216 ... P19491 38409505
    807286 8fpy:A (2.98) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807287 8fpy:A (2.98) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807288 8fpy:B (2.98) BS01 GLU ? GO:0005216 ... P19491 38409505
    807289 8fpy:B (2.98) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807290 8fpy:B (2.98) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807291 8fpy:C (2.98) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807292 8fpy:C (2.98) BS02 GLU ? GO:0005216 ... P19491 38409505
    807293 8fpy:C (2.98) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807294 8fpy:D (2.98) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807295 8fpy:D (2.98) BS02 GLU ? GO:0005216 ... P19491 38409505
    807296 8fpy:D (2.98) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807297 8fpz:A (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    807298 8fpz:A (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807299 8fpz:A (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807300 8fpz:B (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    807301 8fpz:B (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807302 8fpz:B (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807303 8fpz:C (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807304 8fpz:C (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    807305 8fpz:C (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807306 8fpz:D (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807307 8fpz:D (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    807308 8fpz:D (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807309 8fq2:A (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807310 8fq2:A (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807311 8fq2:A (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807312 8fq2:B (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807313 8fq2:B (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807314 8fq2:B (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807315 8fq2:C (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807316 8fq2:C (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    807317 8fq2:C (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807318 8fq2:D (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807319 8fq2:D (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    807320 8fq2:D (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807321 8fq3:A (3.17) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807322 8fq3:A (3.17) BS02 GLU ? GO:0005216 ... P19491 38409505
    807323 8fq3:A (3.17) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807324 8fq3:B (3.17) BS01 GLU ? GO:0005216 ... P19491 38409505
    807325 8fq3:B (3.17) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807326 8fq3:B (3.17) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807327 8fq3:C (3.17) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807328 8fq3:C (3.17) BS02 GLU ? GO:0005216 ... P19491 38409505
    807329 8fq3:C (3.17) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807330 8fq3:D (3.17) BS01 GLU ? GO:0005216 ... P19491 38409505
    807331 8fq3:D (3.17) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807332 8fq3:D (3.17) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807333 8fq6:A (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807334 8fq6:A (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    807335 8fq6:A (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807336 8fq6:B (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807337 8fq6:B (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807338 8fq6:B (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807339 8fq6:C (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807340 8fq6:C (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    807341 8fq6:C (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807342 8fq6:D (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807343 8fq6:D (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807344 8fq6:D (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807345 8fq8:A (3.11) BS01 GLU ? GO:0005216 ... P19491 38409505
    807346 8fq8:A (3.11) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807347 8fq8:A (3.11) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807348 8fq8:B (3.11) BS01 GLU ? GO:0005216 ... P19491 38409505
    807349 8fq8:B (3.11) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807350 8fq8:B (3.11) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807351 8fq8:C (3.11) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807352 8fq8:C (3.11) BS02 GLU ? GO:0005216 ... P19491 38409505
    807353 8fq8:C (3.11) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807354 8fq8:D (3.11) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807355 8fq8:D (3.11) BS02 GLU ? GO:0005216 ... P19491 38409505
    807356 8fq8:D (3.11) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807357 8fq9:A (3.0) BS01 LMO ? GO:0005886 ... P30878 38823641
    807358 8fqa:A (3.35) BS01 GLU ? GO:0005216 ... P19491 38409505
    807359 8fqa:A (3.35) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807360 8fqa:A (3.35) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807361 8fqa:B (3.35) BS01 GLU ? GO:0005216 ... P19491 38409505
    807362 8fqa:B (3.35) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807363 8fqa:B (3.35) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807364 8fqa:C (3.35) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807365 8fqa:C (3.35) BS02 GLU ? GO:0005216 ... P19491 38409505
    807366 8fqa:C (3.35) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807367 8fqa:D (3.35) BS01 GLU ? GO:0005216 ... P19491 38409505
    807368 8fqa:D (3.35) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807369 8fqc:A (3.2) BS01 FE ? N/A A0A482MFZ0 38272938
    807370 8fqd:A (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    807371 8fqd:A (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807372 8fqd:A (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807373 8fqd:B (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    807374 8fqd:B (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807375 8fqd:B (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807376 8fqd:C (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807377 8fqd:C (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    807378 8fqd:C (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807379 8fqd:D (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807380 8fqd:D (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    807381 8fqd:D (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807382 8fqe:A (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807383 8fqe:A (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807384 8fqe:A (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807385 8fqe:B (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807386 8fqe:B (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807387 8fqe:C (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807388 8fqe:C (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    807389 8fqe:C (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807390 8fqe:D (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    807391 8fqe:D (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807392 8fqg:A (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    807393 8fqg:A (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807394 8fqg:A (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807395 8fqg:B (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    807396 8fqg:B (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    807397 8fqg:B (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    807398 8fqg:C (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    807399 8fqg:C (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    807400 8fqg:C (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).