SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    807201 8fcx:T (3.04) BS02 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807202 8fcx:U (3.04) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807203 8fcx:V (3.04) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807204 8fcx:V (3.04) BS02 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807205 8fcy:A (3.4) BS01 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807206 8fcy:A (3.4) BS02 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807207 8fcy:A (3.4) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807208 8fcy:A (3.4) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807209 8fcz:A (3.7) BS01 RET ? GO:0000139 ... P02699 37626045
    807210 8fcz:B (3.7) BS01 RET ? GO:0000139 ... P02699 37626045
    807211 8fcz:C (3.7) BS01 BMA N/A N/A N/A 37626045
    807212 8fcz:C (3.7) BS02 MAN N/A N/A N/A 37626045
    807213 8fd0:C (3.71) BS01 BMA N/A N/A N/A 37626045
    807214 8fd0:D (3.71) BS01 BMA N/A N/A N/A 37626045
    807215 8fd1:C (4.25) BS01 BMA N/A N/A N/A 37626045
    807216 8fd1:C (4.25) BS02 MAN N/A N/A N/A 37626045
    807217 8fd2:A (3.65) BS01 rna ? GO:0051607 ... A0ACD6BA43 37557170
    807218 8fd2:B (3.65) BS01 rna ? N/A A0ACD6BA45 37557170
    807219 8fd2:C (3.65) BS01 rna ? N/A A0ACD6BA44 37557170
    807220 8fd2:D (3.65) BS01 rna ? N/A A0ACD6BA44 37557170
    807221 8fd2:E (3.65) BS01 rna ? N/A A0ACD6BA44 37557170
    807222 8fd2:F (3.65) BS01 rna ? N/A A0ACD6BA44 37557170
    807223 8fd2:G (3.65) BS01 rna ? N/A A0ACD6BA44 37557170
    807224 8fd2:H (3.65) BS01 rna ? N/A A0ACD6BA44 37557170
    807225 8fd3:A (3.12) BS01 rna ? GO:0051607 ... A0ACD6BA43 37557170
    807226 8fd3:A (3.12) BS02 dna ? GO:0051607 ... A0ACD6BA43 37557170
    807227 8fd3:B (3.12) BS01 rna ? N/A A0ACD6BA45 37557170
    807228 8fd3:C (3.12) BS01 rna ? N/A A0ACD6BA44 37557170
    807229 8fd3:D (3.12) BS01 rna ? N/A A0ACD6BA44 37557170
    807230 8fd3:E (3.12) BS01 rna ? N/A A0ACD6BA44 37557170
    807231 8fd3:F (3.12) BS01 rna ? N/A A0ACD6BA44 37557170
    807232 8fd3:G (3.12) BS01 rna ? N/A A0ACD6BA44 37557170
    807233 8fd3:H (3.12) BS01 rna ? N/A A0ACD6BA44 37557170
    807234 8fd3:I (3.12) BS01 dna ? GO:0051607 ... A0ACD6BA46 37557170
    807235 8fd3:I (3.12) BS02 dna ? GO:0051607 ... A0ACD6BA46 37557170
    807236 8fd6:A (2.9) BS01 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807237 8fd6:A (2.9) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807238 8fd6:A (2.9) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807239 8fd6:A (2.9) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807240 8fd7:D (3.1) BS01 GBN ? N/A P13806 36973510
    807241 8fd7:D (3.1) BS02 CA ? N/A P13806 36973510
    807242 8fd7:K (3.1) BS01 WO9 ? GO:0005216 ... Q13936 36973510
    807243 8fd7:K (3.1) BS02 YSW ? GO:0005216 ... Q13936 36973510
    807244 8fd7:K (3.1) BS03 CLR ? GO:0005216 ... Q13936 36973510
    807245 8fd7:K (3.1) BS04 CLR ? GO:0005216 ... Q13936 36973510
    807246 8fd7:K (3.1) BS05 CA ? GO:0005216 ... Q13936 36973510
    807247 8fd8:A (3.3) BS01 NAI 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    807248 8fd8:B (3.3) BS01 NAI 1.1.1.-
    1.1.1.141
    1.1.1.232
    GO:0001822 ... P15428 36774348
    807249 8fd9:A (1.7) BS01 XQQ 2.7.10.2 GO:0004672 ... P35991 37651403
    807250 8fda:A (2.2) BS01 HEM 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807251 8fda:A (2.2) BS02 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807252 8fda:B (2.2) BS01 HEM 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807253 8fda:B (2.2) BS02 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807254 8fda:C (2.2) BS01 HEM 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807255 8fda:C (2.2) BS02 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807256 8fda:C (2.2) BS03 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807257 8fda:D (2.2) BS01 HEM 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807258 8fda:D (2.2) BS02 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807259 8fda:D (2.2) BS03 XPK 1.14.14.19
    1.14.14.32
    GO:0004497 ... P05093 37660137
    807260 8fdb:A (3.06) BS01 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    807261 8fdb:A (3.06) BS02 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    807262 8fdb:A (3.06) BS03 MG 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    807263 8fdb:A (3.06) BS04 MG 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    807264 8fdb:A (3.06) BS05 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    807265 8fdb:B (3.06) BS01 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    807266 8fdb:B (3.06) BS02 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    807267 8fdb:B (3.06) BS03 AGP 2.6.1.16 GO:0004360 ... Q12KP2 37145875
    807268 8fdc:A (1.8) BS01 peptide N/A N/A N/A 38007690
    807269 8fdc:B (1.8) BS01 peptide N/A N/A N/A 38007690
    807270 8fdd:A (1.54) BS01 peptide N/A N/A N/A 38007690
    807271 8fdd:B (1.54) BS01 peptide N/A N/A N/A 38007690
    807272 8fdj:A (1.75) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37406385
    807273 8fdj:A (1.75) BS02 NBE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37406385
    807274 8fdk:A (1.89) BS01 HEM ? GO:0004601 ... P69905 37406385
    807275 8fdk:B (1.89) BS01 HEM ? GO:0004601 ... P68871 37406385
    807276 8fdk:B (1.89) BS02 NBE ? GO:0004601 ... P68871 37406385
    807277 8fdk:B (1.89) BS03 NBE ? GO:0004601 ... P68871 37406385
    807278 8fdk:C (1.89) BS01 HEM ? GO:0004601 ... P69905 37406385
    807279 8fdk:D (1.89) BS01 HEM ? GO:0004601 ... P68871 37406385
    807280 8fdk:D (1.89) BS02 NBE ? GO:0004601 ... P68871 37406385
    807281 8fdk:D (1.89) BS03 NBE ? GO:0004601 ... P68871 37406385
    807282 8fdl:A (1.75) BS01 HEM ? GO:0004601 ... P69905 37406385
    807283 8fdl:B (1.75) BS01 HEM ? GO:0004601 ... P68871 37406385
    807284 8fdl:C (1.75) BS01 HEM ? GO:0004601 ... P69905 37406385
    807285 8fdl:C (1.75) BS02 XQU ? GO:0004601 ... P69905 37406385
    807286 8fdl:D (1.75) BS01 HEM ? GO:0004601 ... P68871 37406385
    807287 8fdm:A (1.91) BS01 HEM ? GO:0004601 ... P69905 37406385
    807288 8fdm:B (1.91) BS01 HEM ? GO:0004601 ... P68871 37406385
    807289 8fdm:B (1.91) BS02 NSM ? GO:0004601 ... P68871 37406385
    807290 8fdm:C (1.91) BS01 HEM ? GO:0004601 ... P69905 37406385
    807291 8fdm:D (1.91) BS01 HEM ? GO:0004601 ... P68871 37406385
    807292 8fdm:D (1.91) BS02 NSM ? GO:0004601 ... P68871 37406385
    807293 8fdn:A (2.2) BS01 HEM ? GO:0004601 ... P69905 37406385
    807294 8fdn:B (2.2) BS01 HEM ? GO:0004601 ... P68871 37406385
    807295 8fdn:B (2.2) BS02 XQZ ? GO:0004601 ... P68871 37406385
    807296 8fdn:C (2.2) BS01 HEM ? GO:0004601 ... P69905 37406385
    807297 8fdn:D (2.2) BS01 HEM ? GO:0004601 ... P68871 37406385
    807298 8fdn:D (2.2) BS02 XQZ ? GO:0004601 ... P68871 37406385
    807299 8fdt:A (3.2) BS01 ATP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807300 8fdt:A (3.2) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807301 8fdt:A (3.2) BS03 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807302 8fdt:A (3.2) BS04 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807303 8fdu:A (3.3) BS01 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807304 8fdu:A (3.3) BS02 ADP 6.1.1.11 GO:0000166 ... Q14204
    Q5SJX7
    37322240
    807305 8fdv:A (2.95) BS01 peptide 1.14.99.66 GO:0000122 ... O60341 40175327
    807306 8fdv:A (2.95) BS02 HUF 1.14.99.66 GO:0000122 ... O60341 40175327
    807307 8fdx:A (2.07) BS01 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37200803
    807308 8fdx:A (2.07) BS02 XRR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37200803
    807309 8fdy:A (2.06) BS01 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37200803
    807310 8fdy:A (2.06) BS02 XSI 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37200803
    807311 8fdz:A () BS01 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    N/A N/A N/A
    807312 8fdz:A () BS02 XSO 2.1.2.2
    6.3.3.1
    6.3.4.13
    N/A N/A N/A
    807313 8fe0:A (2.22) BS01 GAR 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37200803
    807314 8fe0:A (2.22) BS02 XSO 2.1.2.2
    6.3.3.1
    6.3.4.13
    GO:0004644 ... P22102 37200803
    807315 8fe1:A (3.0) BS01 GLY ? GO:0004888 ... O93430 36914669
    807316 8fe1:A (3.0) BS02 IVM ? GO:0004888 ... O93430 36914669
    807317 8fe1:A (3.0) BS03 IVM ? GO:0004888 ... O93430 36914669
    807318 8fe1:A (3.0) BS04 GLY ? GO:0004888 ... O93430 36914669
    807319 8fe1:B (3.0) BS01 IVM ? GO:0004888 ... O93430 36914669
    807320 8fe1:B (3.0) BS02 IVM ? GO:0004888 ... O93430 36914669
    807321 8fe1:C (3.0) BS01 GLY ? GO:0004888 ... O93430 36914669
    807322 8fe1:C (3.0) BS02 IVM ? GO:0004888 ... O93430 36914669
    807323 8fe1:C (3.0) BS03 IVM ? GO:0004888 ... O93430 36914669
    807324 8fe1:D (3.0) BS01 IVM ? GO:0004888 ... O93430 36914669
    807325 8fe1:E (3.0) BS01 GLY ? GO:0004888 ... Q6DC22 36914669
    807326 8fe1:E (3.0) BS02 IVM ? GO:0004888 ... Q6DC22 36914669
    807327 8fe1:E (3.0) BS03 IVM ? GO:0004888 ... Q6DC22 36914669
    807328 8fe2:A (2.34) BS01 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807329 8fe2:A (2.34) BS02 XTI 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807330 8fe2:B (2.34) BS01 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807331 8fe2:B (2.34) BS02 XTI 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807332 8fe5:A (2.51) BS01 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807333 8fe5:A (2.51) BS02 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807334 8fe5:A (2.51) BS03 XTT 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807335 8fe5:B (2.51) BS01 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807336 8fe5:B (2.51) BS02 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807337 8fe5:B (2.51) BS03 XTT 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807338 8fe6:A (3.06) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807339 8fe6:A (3.06) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807340 8fe6:C (3.06) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807341 8fe6:C (3.06) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807342 8fe6:E (3.06) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807343 8fe6:E (3.06) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807344 8fe6:G (3.06) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807345 8fe6:G (3.06) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807346 8fe7:A (2.98) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807347 8fe7:A (2.98) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807348 8fe7:C (2.98) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807349 8fe7:C (2.98) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807350 8fe7:E (2.98) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807351 8fe7:E (2.98) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807352 8fe7:G (2.98) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 37653170
    807353 8fe7:G (2.98) BS02 UD1 2.4.1.255 GO:0006493 ... O15294 37653170
    807354 8fe8:A (2.5) BS01 XRB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 37120482
    807355 8fe9:A (3.2) BS01 R9B 2.7.10.2
    2.7.11.1
    GO:0004672 ... Q07912 36854171
    807356 8fec:A (2.7) BS01 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807357 8fec:A (2.7) BS02 XU0 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807358 8fec:B (2.7) BS01 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807359 8fec:B (2.7) BS02 peptide 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807360 8fec:B (2.7) BS03 XU0 2.7.11.11 GO:0000287 ... P17612
    P25685
    37843072
    807361 8feg:B (2.54) BS01 peptide ? GO:0004930 ... P41145 38052802
    807362 8feg:B (2.54) BS02 XT9 ? GO:0004930 ... P41145 38052802
    807363 8fei:A (3.0) BS01 FE ? GO:0005576 ... P02789 N/A
    807364 8fei:A (3.0) BS02 FE ? GO:0005576 ... P02789 N/A
    807365 8fem:A (2.34) BS01 NAP 1.1.1.219
    1.1.1.234
    GO:0016616 ... A0A8T0SQV2 37762209
    807366 8fen:A (2.55) BS01 NAP 1.1.1.219
    1.1.1.234
    GO:0016616 ... A0A8T0SQV2 37762209
    807367 8fen:A (2.55) BS02 DQH 1.1.1.219
    1.1.1.234
    GO:0016616 ... A0A8T0SQV2 37762209
    807368 8fet:A (2.202) BS01 NAP ? GO:0016616 ... C5YGL7 37762209
    807369 8fet:B (2.202) BS01 NAP ? GO:0016616 ... C5YGL7 37762209
    807370 8feu:A (2.12) BS01 NAR ? GO:0016616 ... C5YGL7 37762209
    807371 8feu:A (2.12) BS02 NAP ? GO:0016616 ... C5YGL7 37762209
    807372 8feu:B (2.12) BS01 NAR ? GO:0016616 ... C5YGL7 37762209
    807373 8feu:B (2.12) BS02 NAP ? GO:0016616 ... C5YGL7 37762209
    807374 8fev:A (2.21) BS01 DQH ? GO:0016616 ... C5YGL7 37762209
    807375 8fev:A (2.21) BS02 NAP ? GO:0016616 ... C5YGL7 37762209
    807376 8fev:B (2.21) BS01 DQH ? GO:0016616 ... C5YGL7 37762209
    807377 8fev:B (2.21) BS02 NAP ? GO:0016616 ... C5YGL7 37762209
    807378 8few:A (2.02) BS01 NAR ? GO:0016616 ... C5YGL7 37762209
    807379 8few:B (2.02) BS01 NAR ? GO:0016616 ... C5YGL7 37762209
    807380 8ff0:A (2.6) BS01 7GB 2.7.10.2 GO:0004672 ... P35991 37651403
    807381 8ff4:A (3.6) BS01 rna ? GO:0051607 ... A0ACD6BA43 37557170
    807382 8ff4:A (3.6) BS02 dna ? GO:0051607 ... A0ACD6BA43 37557170
    807383 8ff4:B (3.6) BS01 rna ? N/A A0ACD6BA45 37557170
    807384 8ff4:C (3.6) BS01 rna ? N/A A0ACD6BA44 37557170
    807385 8ff4:C (3.6) BS02 dna ? N/A A0ACD6BA44 37557170
    807386 8ff4:D (3.6) BS01 rna ? N/A A0ACD6BA44 37557170
    807387 8ff4:D (3.6) BS02 dna ? N/A A0ACD6BA44 37557170
    807388 8ff4:E (3.6) BS01 rna ? N/A A0ACD6BA44 37557170
    807389 8ff4:E (3.6) BS02 dna ? N/A A0ACD6BA44 37557170
    807390 8ff4:F (3.6) BS01 rna ? N/A A0ACD6BA44 37557170
    807391 8ff4:F (3.6) BS02 dna ? N/A A0ACD6BA44 37557170
    807392 8ff4:G (3.6) BS01 rna ? N/A A0ACD6BA44 37557170
    807393 8ff4:G (3.6) BS02 dna ? N/A A0ACD6BA44 37557170
    807394 8ff4:H (3.6) BS01 rna ? N/A A0ACD6BA44 37557170
    807395 8ff4:H (3.6) BS02 dna ? N/A A0ACD6BA44 37557170
    807396 8ff4:I (3.6) BS01 dna ? GO:0051607 ... A0ACD6BA46 37557170
    807397 8ff4:I (3.6) BS02 dna ? GO:0051607 ... A0ACD6BA46 37557170
    807398 8ff4:J (3.6) BS01 dna ? N/A A0ACD6BA46 37557170
    807399 8ff4:J (3.6) BS02 dna ? N/A A0ACD6BA46 37557170
    807400 8ff4:K (3.6) BS01 dna ? N/A A0ACD6BA46 37557170

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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