SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    807401 8ff4:L (3.6) BS01 dna ? N/A A0ACD6BA46 37557170
    807402 8ff4:P (3.6) BS01 dna ? N/A A0ACD6BA42 37557170
    807403 8ff4:P (3.6) BS02 dna ? N/A A0ACD6BA42 37557170
    807404 8ff4:Q (3.6) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807405 8ff4:R (3.6) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807406 8ff4:R (3.6) BS02 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807407 8ff4:S (3.6) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807408 8ff4:S (3.6) BS02 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807409 8ff4:T (3.6) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807410 8ff4:T (3.6) BS02 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807411 8ff4:U (3.6) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807412 8ff4:V (3.6) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807413 8ff4:V (3.6) BS02 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807414 8ff4:W (3.6) BS01 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807415 8ff4:W (3.6) BS02 ATP ? GO:0016887 ... A0ACD6BA40 37557170
    807416 8ff5:A (3.13) BS01 rna ? GO:0051607 ... A0ACD6BA43 37557170
    807417 8ff5:A (3.13) BS02 dna ? GO:0051607 ... A0ACD6BA43 37557170
    807418 8ff5:B (3.13) BS01 rna ? N/A A0ACD6BA45 37557170
    807419 8ff5:C (3.13) BS01 rna ? N/A A0ACD6BA44 37557170
    807420 8ff5:C (3.13) BS02 dna ? N/A A0ACD6BA44 37557170
    807421 8ff5:D (3.13) BS01 rna ? N/A A0ACD6BA44 37557170
    807422 8ff5:D (3.13) BS02 dna ? N/A A0ACD6BA44 37557170
    807423 8ff5:E (3.13) BS01 rna ? N/A A0ACD6BA44 37557170
    807424 8ff5:E (3.13) BS02 dna ? N/A A0ACD6BA44 37557170
    807425 8ff5:F (3.13) BS01 rna ? N/A A0ACD6BA44 37557170
    807426 8ff5:F (3.13) BS02 dna ? N/A A0ACD6BA44 37557170
    807427 8ff5:G (3.13) BS01 rna ? N/A A0ACD6BA44 37557170
    807428 8ff5:G (3.13) BS02 dna ? N/A A0ACD6BA44 37557170
    807429 8ff5:H (3.13) BS01 rna ? N/A A0ACD6BA44 37557170
    807430 8ff5:H (3.13) BS02 dna ? N/A A0ACD6BA44 37557170
    807431 8ff5:I (3.13) BS01 dna ? GO:0051607 ... A0ACD6BA46 37557170
    807432 8ff5:I (3.13) BS02 dna ? GO:0051607 ... A0ACD6BA46 37557170
    807433 8ff5:J (3.13) BS01 dna ? N/A A0ACD6BA46 37557170
    807434 8ff5:J (3.13) BS02 dna ? N/A A0ACD6BA46 37557170
    807435 8ff5:K (3.13) BS01 dna ? N/A A0ACD6BA46 37557170
    807436 8ff5:L (3.13) BS01 dna ? N/A A0ACD6BA46 37557170
    807437 8ff6:A (2.49) BS01 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807438 8ff6:B (2.49) BS01 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807439 8ff6:C (2.49) BS01 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807440 8ff6:D (2.49) BS01 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807441 8ff6:E (2.49) BS01 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807442 8ff6:F (2.49) BS01 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807443 8ff7:A (2.194) BS01 ASC 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807444 8ff7:A (2.194) BS02 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807445 8ff7:B (2.194) BS01 ASC 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807446 8ff7:B (2.194) BS02 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807447 8ff7:C (2.194) BS01 ASC 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807448 8ff7:C (2.194) BS02 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807449 8ff7:D (2.194) BS01 ASC 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807450 8ff7:D (2.194) BS02 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807451 8ff7:E (2.194) BS01 ASC 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807452 8ff7:E (2.194) BS02 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807453 8ff7:F (2.194) BS01 ASC 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807454 8ff7:F (2.194) BS02 HEM 1.11.1.11 GO:0000302 ... A0A8T0NWI5 36675291
    807455 8ff8:A (2.33) BS01 XV0 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 37235865
    807456 8ff8:B (2.33) BS01 XV0 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 37235865
    807457 8ffb:A (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807458 8ffb:A (2.25) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807459 8ffb:B (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807460 8ffb:B (2.25) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807461 8ffb:C (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807462 8ffb:C (2.25) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807463 8ffb:D (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807464 8ffb:D (2.25) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807465 8ffb:E (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807466 8ffb:F (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807467 8ffb:G (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807468 8ffb:G (2.25) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807469 8ffb:H (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807470 8ffb:I (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807471 8ffb:I (2.25) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807472 8ffb:I (2.25) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807473 8ffb:J (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807474 8ffb:K (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807475 8ffb:L (2.25) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807476 8ffb:L (2.25) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807477 8ffc:A (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807478 8ffc:A (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807479 8ffc:A (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807480 8ffc:A (1.85) BS04 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807481 8ffc:B (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807482 8ffc:B (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807483 8ffc:B (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807484 8ffc:C (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807485 8ffc:C (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807486 8ffc:C (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807487 8ffc:C (1.85) BS04 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807488 8ffc:D (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807489 8ffc:D (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807490 8ffc:E (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807491 8ffc:E (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807492 8ffc:E (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807493 8ffc:F (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807494 8ffc:F (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807495 8ffc:G (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807496 8ffc:G (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807497 8ffc:H (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807498 8ffc:H (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807499 8ffc:I (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807500 8ffc:I (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807501 8ffc:J (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807502 8ffc:J (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807503 8ffc:K (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807504 8ffc:K (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807505 8ffc:K (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807506 8ffc:L (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807507 8ffc:L (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807508 8ffc:M (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807509 8ffc:M (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807510 8ffc:M (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807511 8ffc:N (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807512 8ffc:N (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807513 8ffc:O (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807514 8ffc:O (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807515 8ffc:P (1.85) BS01 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807516 8ffc:P (1.85) BS02 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807517 8ffc:P (1.85) BS03 FE2 ? GO:0003677 ... Q9I4Z7 36902100
    807518 8ffd:A (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807519 8ffd:B (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807520 8ffd:C (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807521 8ffd:D (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807522 8ffd:E (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807523 8ffd:F (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807524 8ffd:G (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807525 8ffd:H (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807526 8ffd:I (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807527 8ffd:J (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807528 8ffd:K (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807529 8ffd:L (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807530 8ffd:M (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807531 8ffd:N (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807532 8ffd:O (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807533 8ffd:P (2.2) BS01 MN ? GO:0003677 ... Q9I4Z7 36902100
    807534 8fff:A (1.92) BS01 ACT 6.3.2.4 GO:0000166 ... W8TRT0 38293037
    807535 8fff:A (1.92) BS02 ACT 6.3.2.4 GO:0000166 ... W8TRT0 38293037
    807536 8ffi:A (2.7) BS01 rna ? GO:0007165 ... A0A316E683 37494956
    807537 8ffi:A (2.7) BS02 dna ? GO:0007165 ... A0A316E683 37494956
    807538 8ffi:B (2.7) BS01 rna ? GO:0003676 ... A0A316E3U6 37494956
    807539 8ffi:B (2.7) BS02 dna ? GO:0003676 ... A0A316E3U6 37494956
    807540 8ffi:E (2.7) BS01 rna ? GO:0007165 ... A0A316E683 37494956
    807541 8ffi:E (2.7) BS02 dna ? GO:0007165 ... A0A316E683 37494956
    807542 8ffi:F (2.7) BS01 rna ? GO:0003676 ... A0A316E3U6 37494956
    807543 8ffi:F (2.7) BS02 dna ? GO:0003676 ... A0A316E3U6 37494956
    807544 8ffi:F (2.7) BS03 MG ? GO:0003676 ... A0A316E3U6 37494956
    807545 8ffi:I (2.7) BS01 rna ? GO:0007165 ... A0A316E683 37494956
    807546 8ffi:I (2.7) BS02 dna ? GO:0007165 ... A0A316E683 37494956
    807547 8ffi:L (2.7) BS01 rna ? GO:0003676 ... A0A316E3U6 37494956
    807548 8ffi:L (2.7) BS02 dna ? GO:0003676 ... A0A316E3U6 37494956
    807549 8ffi:L (2.7) BS03 MG ? GO:0003676 ... A0A316E3U6 37494956
    807550 8ffi:M (2.7) BS01 rna ? GO:0007165 ... A0A316E683 37494956
    807551 8ffi:M (2.7) BS02 dna ? GO:0007165 ... A0A316E683 37494956
    807552 8ffi:N (2.7) BS01 rna ? GO:0003676 ... A0A316E3U6 37494956
    807553 8ffi:N (2.7) BS02 dna ? GO:0003676 ... A0A316E3U6 37494956
    807554 8ffi:N (2.7) BS03 MG ? GO:0003676 ... A0A316E3U6 37494956
    807555 8ffm:A (2.9) BS01 FZ4 ? GO:0005216 ... Q9WUD2 38225355
    807556 8ffm:B (2.9) BS01 FZ4 ? GO:0005216 ... Q9WUD2 38225355
    807557 8ffm:C (2.9) BS01 FZ4 ? GO:0005216 ... Q9WUD2 38225355
    807558 8ffm:D (2.9) BS01 FZ4 ? GO:0005216 ... Q9WUD2 38225355
    807559 8ffn:A (2.96) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    807560 8ffn:A (2.96) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    807561 8ffn:A (2.96) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    807562 8ffn:A (2.96) BS04 ERG ? GO:0005216 ... Q9XSM3 38225355
    807563 8ffn:A (2.96) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    807564 8ffn:B (2.96) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    807565 8ffn:B (2.96) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    807566 8ffn:B (2.96) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    807567 8ffn:B (2.96) BS04 ERG ? GO:0005216 ... Q9XSM3 38225355
    807568 8ffn:B (2.96) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    807569 8ffn:C (2.96) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    807570 8ffn:C (2.96) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    807571 8ffn:C (2.96) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    807572 8ffn:C (2.96) BS04 ERG ? GO:0005216 ... Q9XSM3 38225355
    807573 8ffn:C (2.96) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    807574 8ffn:D (2.96) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    807575 8ffn:D (2.96) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    807576 8ffn:D (2.96) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    807577 8ffn:D (2.96) BS04 ERG ? GO:0005216 ... Q9XSM3 38225355
    807578 8ffn:D (2.96) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    807579 8ffo:A (3.5) BS01 ERG ? GO:0005216 ... Q9XSM3 37735536
    807580 8ffo:A (3.5) BS02 CPL ? GO:0005216 ... Q9XSM3 37735536
    807581 8ffo:A (3.5) BS03 CPL ? GO:0005216 ... Q9XSM3 37735536
    807582 8ffo:A (3.5) BS04 ERG ? GO:0005216 ... Q9XSM3 37735536
    807583 8ffo:A (3.5) BS05 PIO ? GO:0005216 ... Q9XSM3 37735536
    807584 8ffo:A (3.5) BS06 CPL ? GO:0005216 ... Q9XSM3 37735536
    807585 8ffo:A (3.5) BS07 CPL ? GO:0005216 ... Q9XSM3 37735536
    807586 8ffo:B (3.5) BS01 CPL ? GO:0005216 ... Q9XSM3 37735536
    807587 8ffo:B (3.5) BS02 ERG ? GO:0005216 ... Q9XSM3 37735536
    807588 8ffo:B (3.5) BS03 CPL ? GO:0005216 ... Q9XSM3 37735536
    807589 8ffo:B (3.5) BS04 CPL ? GO:0005216 ... Q9XSM3 37735536
    807590 8ffo:B (3.5) BS05 ERG ? GO:0005216 ... Q9XSM3 37735536
    807591 8ffo:B (3.5) BS06 PIO ? GO:0005216 ... Q9XSM3 37735536
    807592 8ffo:B (3.5) BS07 CPL ? GO:0005216 ... Q9XSM3 37735536
    807593 8ffo:C (3.5) BS01 CPL ? GO:0005216 ... Q9XSM3 37735536
    807594 8ffo:C (3.5) BS02 ERG ? GO:0005216 ... Q9XSM3 37735536
    807595 8ffo:C (3.5) BS03 CPL ? GO:0005216 ... Q9XSM3 37735536
    807596 8ffo:C (3.5) BS04 CPL ? GO:0005216 ... Q9XSM3 37735536
    807597 8ffo:C (3.5) BS05 ERG ? GO:0005216 ... Q9XSM3 37735536
    807598 8ffo:C (3.5) BS06 PIO ? GO:0005216 ... Q9XSM3 37735536
    807599 8ffo:C (3.5) BS07 CPL ? GO:0005216 ... Q9XSM3 37735536
    807600 8ffo:D (3.5) BS01 CPL ? GO:0005216 ... Q9XSM3 37735536

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).