SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    807601 8ffo:D (3.5) BS02 CPL ? GO:0005216 ... Q9XSM3 37735536
    807602 8ffo:D (3.5) BS03 ERG ? GO:0005216 ... Q9XSM3 37735536
    807603 8ffo:D (3.5) BS04 CPL ? GO:0005216 ... Q9XSM3 37735536
    807604 8ffo:D (3.5) BS05 CPL ? GO:0005216 ... Q9XSM3 37735536
    807605 8ffo:D (3.5) BS06 ERG ? GO:0005216 ... Q9XSM3 37735536
    807606 8ffo:D (3.5) BS07 PIO ? GO:0005216 ... Q9XSM3 37735536
    807607 8ffq:A (2.65) BS01 ERG ? GO:0005216 ... Q9XSM3 38225355
    807608 8ffq:A (2.65) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    807609 8ffq:A (2.65) BS03 R2R ? GO:0005216 ... Q9XSM3 38225355
    807610 8ffq:A (2.65) BS04 CPL ? GO:0005216 ... Q9XSM3 38225355
    807611 8ffq:A (2.65) BS05 CPL ? GO:0005216 ... Q9XSM3 38225355
    807612 8ffq:A (2.65) BS06 ERG ? GO:0005216 ... Q9XSM3 38225355
    807613 8ffq:A (2.65) BS07 ERG ? GO:0005216 ... Q9XSM3 38225355
    807614 8ffq:B (2.65) BS01 ERG ? GO:0005216 ... Q9XSM3 38225355
    807615 8ffq:B (2.65) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    807616 8ffq:B (2.65) BS03 R2R ? GO:0005216 ... Q9XSM3 38225355
    807617 8ffq:B (2.65) BS04 CPL ? GO:0005216 ... Q9XSM3 38225355
    807618 8ffq:B (2.65) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    807619 8ffq:B (2.65) BS06 ERG ? GO:0005216 ... Q9XSM3 38225355
    807620 8ffq:B (2.65) BS07 CPL ? GO:0005216 ... Q9XSM3 38225355
    807621 8ffq:C (2.65) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    807622 8ffq:C (2.65) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    807623 8ffq:C (2.65) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    807624 8ffq:C (2.65) BS04 CPL ? GO:0005216 ... Q9XSM3 38225355
    807625 8ffq:C (2.65) BS05 ERG ? GO:0005216 ... Q9XSM3 38225355
    807626 8ffq:C (2.65) BS06 ERG ? GO:0005216 ... Q9XSM3 38225355
    807627 8ffq:C (2.65) BS07 CPL ? GO:0005216 ... Q9XSM3 38225355
    807628 8ffq:D (2.65) BS01 R2R ? GO:0005216 ... Q9XSM3 38225355
    807629 8ffq:D (2.65) BS02 ERG ? GO:0005216 ... Q9XSM3 38225355
    807630 8ffq:D (2.65) BS03 ERG ? GO:0005216 ... Q9XSM3 38225355
    807631 8ffq:D (2.65) BS04 CPL ? GO:0005216 ... Q9XSM3 38225355
    807632 8ffq:D (2.65) BS05 CPL ? GO:0005216 ... Q9XSM3 38225355
    807633 8ffq:D (2.65) BS06 ERG ? GO:0005216 ... Q9XSM3 38225355
    807634 8ffq:D (2.65) BS07 ERG ? GO:0005216 ... Q9XSM3 38225355
    807635 8ffr:A (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807636 8ffr:B (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807637 8ffr:C (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807638 8ffr:D (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807639 8ffr:E (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807640 8ffr:F (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807641 8ffr:G (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807642 8ffr:H (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807643 8ffr:I (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807644 8ffr:J (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807645 8ffr:K (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807646 8ffr:L (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807647 8ffr:M (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807648 8ffr:N (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807649 8ffr:O (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807650 8ffr:P (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807651 8ffr:Q (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807652 8ffr:R (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807653 8ffr:S (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807654 8ffr:T (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807655 8ffr:U (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807656 8ffr:V (3.49) BS01 rna ? GO:0003723 ... A8VR20 36560817
    807657 8ffs:A (2.96) BS01 ERY ? GO:0005886 ... W9B4M6 37067435
    807658 8fft:A (2.1) BS01 MG N/A GO:0009058 ... N/A 37497377
    807659 8fft:A (2.1) BS02 MG N/A GO:0009058 ... N/A 37497377
    807660 8fft:B (2.1) BS01 MG N/A GO:0009058 ... N/A 37497377
    807661 8fft:C (2.1) BS01 MG N/A GO:0009058 ... N/A 37497377
    807662 8fft:D (2.1) BS01 MG N/A GO:0009058 ... N/A 37497377
    807663 8ffu:A (2.04) BS01 MG N/A GO:0009058 ... N/A 37497377
    807664 8ffu:A (2.04) BS02 XUR N/A GO:0009058 ... N/A 37497377
    807665 8ffu:B (2.04) BS01 MG N/A GO:0009058 ... N/A 37497377
    807666 8ffu:C (2.04) BS01 MG N/A GO:0009058 ... N/A 37497377
    807667 8ffu:C (2.04) BS02 XUR N/A GO:0009058 ... N/A 37497377
    807668 8ffu:D (2.04) BS01 MG N/A GO:0009058 ... N/A 37497377
    807669 8ffv:A (3.01) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    807670 8ffv:B (3.01) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    807671 8ffv:C (3.01) BS01 DEX ? GO:0003700 ... P04150 37945740
    807672 8ffw:A (3.23) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    807673 8ffw:A (3.23) BS02 MG 3.6.4.10 GO:0001764 ... P07900 37945740
    807674 8ffw:B (3.23) BS01 ATP 3.6.4.10 GO:0001764 ... P07900 37945740
    807675 8ffw:B (3.23) BS02 MG 3.6.4.10 GO:0001764 ... P07900 37945740
    807676 8ffw:C (3.23) BS01 DEX ? GO:0003700 ... P04150 37945740
    807677 8ffx:A (2.42) BS01 XU9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 37049868
    807678 8ffy:A (3.6) BS01 rna 6.1.1.11 GO:0000049 ... Q9NP81 37558671
    807679 8ffy:A (3.6) BS02 SSA 6.1.1.11 GO:0000049 ... Q9NP81 37558671
    807680 8ffy:B (3.6) BS01 rna 6.1.1.11 GO:0000049 ... Q9NP81 37558671
    807681 8ffy:B (3.6) BS02 SSA 6.1.1.11 GO:0000049 ... Q9NP81 37558671
    807682 8ffz:A (3.8) BS01 dna ? GO:0000978 ... P39933 37402369
    807683 8ffz:A (3.8) BS02 dna ? GO:0000978 ... P39933 37402369
    807684 8ffz:A (3.8) BS03 ZN ? GO:0000978 ... P39933 37402369
    807685 8ffz:A (3.8) BS04 ZN ? GO:0000978 ... P39933 37402369
    807686 8ffz:A (3.8) BS05 ZN ? GO:0000978 ... P39933 37402369
    807687 8ffz:A (3.8) BS06 ZN ? GO:0000978 ... P39933 37402369
    807688 8ffz:A (3.8) BS07 ZN ? GO:0000978 ... P39933 37402369
    807689 8ffz:A (3.8) BS08 ZN ? GO:0000978 ... P39933 37402369
    807690 8ffz:A (3.8) BS09 ZN ? GO:0000978 ... P39933 37402369
    807691 8ffz:A (3.8) BS10 ZN ? GO:0000978 ... P39933 37402369
    807692 8ffz:A (3.8) BS11 ZN ? GO:0000978 ... P39933 37402369
    807693 8ffz:B (3.8) BS01 dna ? GO:0000127 ... P34111 37402369
    807694 8ffz:B (3.8) BS02 dna ? GO:0000127 ... P34111 37402369
    807695 8ffz:C (3.8) BS01 dna ? GO:0000127 ... P33339 37402369
    807696 8ffz:C (3.8) BS02 dna ? GO:0000127 ... P33339 37402369
    807697 8ffz:E (3.8) BS01 dna ? GO:0000127 ... Q06339 37402369
    807698 8ffz:H (3.8) BS01 dna ? GO:0003677 ... P13393
    P29056
    37402369
    807699 8ffz:H (3.8) BS02 dna ? GO:0003677 ... P13393
    P29056
    37402369
    807700 8fg0:A (2.36) BS01 peptide N/A N/A N/A 37082831
    807701 8fg0:B (2.36) BS01 peptide N/A N/A N/A 37082831
    807702 8fg0:C (2.36) BS01 peptide N/A N/A N/A 37082831
    807703 8fg0:D (2.36) BS01 peptide N/A N/A N/A 37082831
    807704 8fg1:A (-1.00) BS01 peptide ? GO:0003779 ... O60610 37832872
    807705 8fg3:A (1.49) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 37615343
    807706 8fg3:A (1.49) BS02 MG 3.6.5.2 GO:0003924 ... P01112 37615343
    807707 8fg4:A (1.85) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 37615343
    807708 8fg4:A (1.85) BS02 CA 3.6.5.2 GO:0003924 ... P01112 37615343
    807709 8fg4:A (1.85) BS03 MG 3.6.5.2 GO:0003924 ... P01112 37615343
    807710 8fg6:B (2.3) BS01 peptide N/A N/A N/A 38503834
    807711 8fg8:A (2.35) BS01 CA 2.4.1.5 GO:0009250 ... P08987 37285134
    807712 8fg8:B (2.35) BS01 CA 2.4.1.5 GO:0009250 ... P08987 37285134
    807713 8fg8:B (2.35) BS02 XV5 2.4.1.5 GO:0009250 ... P08987 37285134
    807714 8fg9:A (1.95) BS01 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807715 8fg9:A (1.95) BS02 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807716 8fg9:A (1.95) BS03 XVO 1.14.13.39 GO:0004517 ... P29476 37433128
    807717 8fg9:A (1.95) BS04 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807718 8fg9:A (1.95) BS05 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807719 8fg9:B (1.95) BS01 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807720 8fg9:B (1.95) BS02 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807721 8fg9:B (1.95) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807722 8fg9:B (1.95) BS04 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807723 8fg9:B (1.95) BS05 XVO 1.14.13.39 GO:0004517 ... P29476 37433128
    807724 8fga:A (1.8947) BS01 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807725 8fga:A (1.8947) BS02 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807726 8fga:A (1.8947) BS03 XVU 1.14.13.39 GO:0004517 ... P29476 37433128
    807727 8fga:A (1.8947) BS04 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807728 8fga:A (1.8947) BS05 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807729 8fga:B (1.8947) BS01 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807730 8fga:B (1.8947) BS02 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807731 8fga:B (1.8947) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807732 8fga:B (1.8947) BS04 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807733 8fga:B (1.8947) BS05 XVU 1.14.13.39 GO:0004517 ... P29476 37433128
    807734 8fgb:A (1.91) BS01 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807735 8fgb:A (1.91) BS02 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807736 8fgb:A (1.91) BS03 V80 1.14.13.39 GO:0004517 ... P29476 37433128
    807737 8fgb:A (1.91) BS04 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807738 8fgb:A (1.91) BS05 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807739 8fgb:B (1.91) BS01 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807740 8fgb:B (1.91) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807741 8fgb:B (1.91) BS03 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807742 8fgb:B (1.91) BS04 V80 1.14.13.39 GO:0004517 ... P29476 37433128
    807743 8fgb:B (1.91) BS05 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807744 8fgc:A (1.779) BS01 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807745 8fgc:A (1.779) BS02 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807746 8fgc:A (1.779) BS03 XVZ 1.14.13.39 GO:0004517 ... P29476 37433128
    807747 8fgc:A (1.779) BS04 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807748 8fgc:A (1.779) BS05 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807749 8fgc:B (1.779) BS01 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807750 8fgc:B (1.779) BS02 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807751 8fgc:B (1.779) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807752 8fgc:B (1.779) BS04 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807753 8fgc:B (1.779) BS05 XVZ 1.14.13.39 GO:0004517 ... P29476 37433128
    807754 8fgd:A (1.776) BS01 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807755 8fgd:A (1.776) BS02 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807756 8fgd:A (1.776) BS03 XVF 1.14.13.39 GO:0004517 ... P29476 37433128
    807757 8fgd:A (1.776) BS04 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807758 8fge:A (1.89) BS01 HEM 1.14.13.39 GO:0004517 ... P29476 37433128
    807759 8fge:A (1.89) BS02 H4B 1.14.13.39 GO:0004517 ... P29476 37433128
    807760 8fge:A (1.89) BS03 XVA 1.14.13.39 GO:0004517 ... P29476 37433128
    807761 8fge:A (1.89) BS04 ZN 1.14.13.39 GO:0004517 ... P29476 37433128
    807762 8fgf:A (1.83) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 37433128
    807763 8fgf:A (1.83) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807764 8fgf:A (1.83) BS03 XVO 1.14.13.39 GO:0004517 ... P29475 37433128
    807765 8fgf:A (1.83) BS04 ZN 1.14.13.39 GO:0004517 ... P29475 37433128
    807766 8fgf:A (1.83) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807767 8fgf:B (1.83) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807768 8fgf:B (1.83) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 37433128
    807769 8fgf:B (1.83) BS03 HEM 1.14.13.39 GO:0004517 ... P29475 37433128
    807770 8fgf:B (1.83) BS04 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807771 8fgf:B (1.83) BS05 XVO 1.14.13.39 GO:0004517 ... P29475 37433128
    807772 8fgg:A (1.859) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 37433128
    807773 8fgg:A (1.859) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807774 8fgg:A (1.859) BS03 XVU 1.14.13.39 GO:0004517 ... P29475 37433128
    807775 8fgg:A (1.859) BS04 ZN 1.14.13.39 GO:0004517 ... P29475 37433128
    807776 8fgg:A (1.859) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807777 8fgg:B (1.859) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807778 8fgg:B (1.859) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 37433128
    807779 8fgg:B (1.859) BS03 HEM 1.14.13.39 GO:0004517 ... P29475 37433128
    807780 8fgg:B (1.859) BS04 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807781 8fgg:B (1.859) BS05 XVU 1.14.13.39 GO:0004517 ... P29475 37433128
    807782 8fgh:A (2.17) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 37433128
    807783 8fgh:A (2.17) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807784 8fgh:A (2.17) BS03 XW5 1.14.13.39 GO:0004517 ... P29475 37433128
    807785 8fgh:A (2.17) BS04 ZN 1.14.13.39 GO:0004517 ... P29475 37433128
    807786 8fgh:A (2.17) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807787 8fgh:B (2.17) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807788 8fgh:B (2.17) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 37433128
    807789 8fgh:B (2.17) BS03 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807790 8fgh:B (2.17) BS04 HEM 1.14.13.39 GO:0004517 ... P29475 37433128
    807791 8fgh:B (2.17) BS05 XW5 1.14.13.39 GO:0004517 ... P29475 37433128
    807792 8fgh:C (2.17) BS01 HEM 1.14.13.39 GO:0004517 ... P29475 37433128
    807793 8fgh:C (2.17) BS02 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807794 8fgh:C (2.17) BS03 XW5 1.14.13.39 GO:0004517 ... P29475 37433128
    807795 8fgh:C (2.17) BS04 ZN 1.14.13.39 GO:0004517 ... P29475 37433128
    807796 8fgh:C (2.17) BS05 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807797 8fgh:D (2.17) BS01 H4B 1.14.13.39 GO:0004517 ... P29475 37433128
    807798 8fgh:D (2.17) BS02 ZN 1.14.13.39 GO:0004517 ... P29475 37433128
    807799 8fgh:D (2.17) BS03 HEM 1.14.13.39 GO:0004517 ... P29475 37433128
    807800 8fgh:D (2.17) BS04 H4B 1.14.13.39 GO:0004517 ... P29475 37433128

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).