SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    807601 8fru:j (2.49) BS03 ZN ? GO:0003723 ... V6TG99 38242118
    807602 8fru:k (2.49) BS01 rna ? GO:0003735 ... A8B481 38242118
    807603 8fru:l (2.49) BS01 rna N/A GO:0003735 ... N/A 38242118
    807604 8fru:l (2.49) BS02 rna N/A GO:0003735 ... N/A 38242118
    807605 8fru:m (2.49) BS01 rna ? GO:0003735 ... A8BXE1 38242118
    807606 8fru:m (2.49) BS02 ZN ? GO:0003735 ... A8BXE1 38242118
    807607 8fru:o (2.49) BS01 rna ? GO:0003735 ... A8BQU8 38242118
    807608 8fru:p (2.49) BS01 rna ? GO:0003735 ... A8BN26 38242118
    807609 8frv:A (2.72) BS01 YAF N/A GO:0000122 ... O60341 N/A
    807610 8frw:A (2.92) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807611 8frw:A (2.92) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807612 8frw:B (2.92) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807613 8frw:B (2.92) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807614 8frw:C (2.92) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807615 8frw:C (2.92) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807616 8frw:D (2.92) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807617 8frw:D (2.92) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807618 8frw:E (2.92) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807619 8frw:E (2.92) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807620 8frx:A (2.7) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807621 8frx:A (2.7) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807622 8frx:B (2.7) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807623 8frx:B (2.7) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807624 8frx:C (2.7) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807625 8frx:C (2.7) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807626 8frx:D (2.7) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807627 8frx:D (2.7) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807628 8frx:E (2.7) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807629 8frx:E (2.7) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807630 8frz:A (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807631 8frz:A (2.75) BS02 SRO ? GO:0004888 ... P23979 38177669
    807632 8frz:B (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807633 8frz:B (2.75) BS02 SRO ? GO:0004888 ... P23979 38177669
    807634 8frz:C (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807635 8frz:C (2.75) BS02 SRO ? GO:0004888 ... P23979 38177669
    807636 8frz:D (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807637 8frz:D (2.75) BS02 SRO ? GO:0004888 ... P23979 38177669
    807638 8frz:E (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807639 8frz:E (2.75) BS02 SRO ? GO:0004888 ... P23979 38177669
    807640 8fs1:A (2.74) BS01 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807641 8fs1:A (2.74) BS02 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807642 8fs1:A (2.74) BS03 YB0 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807643 8fs1:B (2.74) BS01 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807644 8fs1:B (2.74) BS02 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807645 8fs1:B (2.74) BS03 YB0 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807646 8fs1:C (2.74) BS01 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807647 8fs1:C (2.74) BS02 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807648 8fs1:C (2.74) BS03 YB0 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807649 8fs2:A (2.59) BS01 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807650 8fs2:A (2.59) BS02 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807651 8fs2:A (2.59) BS03 YB5 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807652 8fs2:B (2.59) BS01 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807653 8fs2:B (2.59) BS02 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807654 8fs2:B (2.59) BS03 YB5 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807655 8fs2:C (2.59) BS01 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807656 8fs2:C (2.59) BS02 dna 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807657 8fs2:C (2.59) BS03 YB5 2.1.1.72 GO:0003676 ... Q183J3 37082867
    807658 8fs3:A (2.93) BS01 dna ? GO:0000077 ... P32641 37205533
    807659 8fs3:A (2.93) BS02 dna ? GO:0000077 ... P32641 37205533
    807660 8fs3:A (2.93) BS03 AGS ? GO:0000077 ... P32641 37205533
    807661 8fs3:B (2.93) BS01 dna ? GO:0000077 ... P40339 37205533
    807662 8fs3:B (2.93) BS02 AGS ? GO:0000077 ... P40339 37205533
    807663 8fs3:C (2.93) BS01 dna ? GO:0000077 ... P38629 37205533
    807664 8fs3:C (2.93) BS02 MG ? GO:0000077 ... P38629 37205533
    807665 8fs3:C (2.93) BS03 AGS ? GO:0000077 ... P38629 37205533
    807666 8fs3:D (2.93) BS01 AGS ? GO:0000076 ... P40348 37205533
    807667 8fs3:D (2.93) BS02 AGS ? GO:0000076 ... P40348 37205533
    807668 8fs3:E (2.93) BS01 ADP ? GO:0000077 ... P38251 37205533
    807669 8fs4:A (2.94) BS01 dna ? GO:0000077 ... P32641 37205533
    807670 8fs4:A (2.94) BS02 dna ? GO:0000077 ... P32641 37205533
    807671 8fs4:A (2.94) BS03 AGS ? GO:0000077 ... P32641 37205533
    807672 8fs4:B (2.94) BS01 dna ? GO:0000077 ... P40339 37205533
    807673 8fs4:B (2.94) BS02 AGS ? GO:0000077 ... P40339 37205533
    807674 8fs4:B (2.94) BS03 AGS ? GO:0000077 ... P40339 37205533
    807675 8fs4:C (2.94) BS01 dna ? GO:0000077 ... P38629 37205533
    807676 8fs4:C (2.94) BS02 AGS ? GO:0000077 ... P38629 37205533
    807677 8fs4:C (2.94) BS03 MG ? GO:0000077 ... P38629 37205533
    807678 8fs4:D (2.94) BS01 AGS ? GO:0000076 ... P40348 37205533
    807679 8fs4:E (2.94) BS01 AGS ? GO:0000077 ... P38251 37205533
    807680 8fs4:E (2.94) BS02 ADP ? GO:0000077 ... P38251 37205533
    807681 8fs5:A (2.76) BS01 dna ? GO:0000077 ... P32641 37205533
    807682 8fs5:A (2.76) BS02 dna ? GO:0000077 ... P32641 37205533
    807683 8fs5:A (2.76) BS03 AGS ? GO:0000077 ... P32641 37205533
    807684 8fs5:A (2.76) BS04 MG ? GO:0000077 ... P32641 37205533
    807685 8fs5:B (2.76) BS01 dna ? GO:0000077 ... P40339 37205533
    807686 8fs5:B (2.76) BS02 AGS ? GO:0000077 ... P40339 37205533
    807687 8fs5:B (2.76) BS03 AGS ? GO:0000077 ... P40339 37205533
    807688 8fs5:C (2.76) BS01 AGS ? GO:0000077 ... P38629 37205533
    807689 8fs5:C (2.76) BS02 AGS ? GO:0000077 ... P38629 37205533
    807690 8fs5:C (2.76) BS03 MG ? GO:0000077 ... P38629 37205533
    807691 8fs5:D (2.76) BS01 AGS ? GO:0000076 ... P40348 37205533
    807692 8fs5:E (2.76) BS01 AGS ? GO:0000077 ... P38251 37205533
    807693 8fs5:E (2.76) BS02 ADP ? GO:0000077 ... P38251 37205533
    807694 8fs6:A (2.9) BS01 dna ? GO:0000077 ... P32641 37205533
    807695 8fs6:A (2.9) BS02 dna ? GO:0000077 ... P32641 37205533
    807696 8fs6:A (2.9) BS03 AGS ? GO:0000077 ... P32641 37205533
    807697 8fs6:A (2.9) BS04 MG ? GO:0000077 ... P32641 37205533
    807698 8fs6:B (2.9) BS01 AGS ? GO:0000077 ... P40339 37205533
    807699 8fs6:C (2.9) BS01 AGS ? GO:0000077 ... P38629 37205533
    807700 8fs6:D (2.9) BS01 AGS ? GO:0000076 ... P40348 37205533
    807701 8fs6:E (2.9) BS01 AGS ? GO:0000077 ... P38251 37205533
    807702 8fs6:E (2.9) BS02 ADP ? GO:0000077 ... P38251 37205533
    807703 8fs6:G (2.9) BS01 dna ? GO:0000077 ... P48581 37205533
    807704 8fs7:A (2.85) BS01 dna ? GO:0000077 ... P32641 37205533
    807705 8fs7:A (2.85) BS02 dna ? GO:0000077 ... P32641 37205533
    807706 8fs7:A (2.85) BS03 dna ? GO:0000077 ... P32641 37205533
    807707 8fs7:A (2.85) BS04 MG ? GO:0000077 ... P32641 37205533
    807708 8fs7:A (2.85) BS05 AGS ? GO:0000077 ... P32641 37205533
    807709 8fs7:B (2.85) BS01 dna ? GO:0000077 ... P40339 37205533
    807710 8fs7:B (2.85) BS02 AGS ? GO:0000077 ... P40339 37205533
    807711 8fs7:C (2.85) BS01 dna ? GO:0000077 ... P38629 37205533
    807712 8fs7:C (2.85) BS02 AGS ? GO:0000077 ... P38629 37205533
    807713 8fs7:D (2.85) BS01 dna ? GO:0000076 ... P40348 37205533
    807714 8fs7:D (2.85) BS02 AGS ? GO:0000076 ... P40348 37205533
    807715 8fs7:D (2.85) BS03 AGS ? GO:0000076 ... P40348 37205533
    807716 8fs7:E (2.85) BS01 AGS ? GO:0000077 ... P38251 37205533
    807717 8fs7:E (2.85) BS02 ADP ? GO:0000077 ... P38251 37205533
    807718 8fs8:A (3.04) BS01 dna ? GO:0000077 ... P32641 37205533
    807719 8fs8:A (3.04) BS02 dna ? GO:0000077 ... P32641 37205533
    807720 8fs8:A (3.04) BS03 dna ? GO:0000077 ... P32641 37205533
    807721 8fs8:A (3.04) BS04 AGS ? GO:0000077 ... P32641 37205533
    807722 8fs8:A (3.04) BS05 MG ? GO:0000077 ... P32641 37205533
    807723 8fs8:B (3.04) BS01 AGS ? GO:0000077 ... P40339 37205533
    807724 8fs8:C (3.04) BS01 AGS ? GO:0000077 ... P38629 37205533
    807725 8fs8:C (3.04) BS02 MG ? GO:0000077 ... P38629 37205533
    807726 8fs8:D (3.04) BS01 AGS ? GO:0000076 ... P40348 37205533
    807727 8fs8:D (3.04) BS02 AGS ? GO:0000076 ... P40348 37205533
    807728 8fs8:E (3.04) BS01 AGS ? GO:0000077 ... P38251 37205533
    807729 8fs8:E (3.04) BS02 ADP ? GO:0000077 ... P38251 37205533
    807730 8fsb:A (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807731 8fsb:B (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807732 8fsb:B (2.75) BS02 SRO ? GO:0004888 ... P23979 38177669
    807733 8fsb:C (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807734 8fsb:D (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807735 8fsb:D (2.75) BS02 SRO ? GO:0004888 ... P23979 38177669
    807736 8fsb:E (2.75) BS01 SRO ? GO:0004888 ... P23979 38177669
    807737 8fsd:A (1.49) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807738 8fsd:A (1.49) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807739 8fsd:A (1.49) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807740 8fsd:A (1.49) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807741 8fsd:B (1.49) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807742 8fsd:B (1.49) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807743 8fsd:B (1.49) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807744 8fsd:B (1.49) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807745 8fsd:C (1.49) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807746 8fsd:C (1.49) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807747 8fsd:C (1.49) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807748 8fsd:C (1.49) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807749 8fsd:D (1.49) BS01 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807750 8fsd:D (1.49) BS02 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807751 8fsd:D (1.49) BS03 PLG 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807752 8fsd:D (1.49) BS04 FFO 2.1.2.1 GO:0004372 ... A0A0R0IK90 37811683
    807753 8fsi:A (1.46) BS01 SF4 1.97.1.4 GO:0003824 ... P0A9N4 37156396
    807754 8fsi:A (1.46) BS02 SAM 1.97.1.4 GO:0003824 ... P0A9N4 37156396
    807755 8fsk:A (3.13) BS01 YAO N/A GO:0000122 ... O60341 N/A
    807756 8fsp:A (3.79) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807757 8fsp:A (3.79) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807758 8fsp:B (3.79) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807759 8fsp:B (3.79) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807760 8fsp:C (3.79) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807761 8fsp:C (3.79) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807762 8fsp:D (3.79) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807763 8fsp:D (3.79) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807764 8fsp:E (3.79) BS01 Y82 ? GO:0004888 ... P23979 38177669
    807765 8fsp:E (3.79) BS02 Y82 ? GO:0004888 ... P23979 38177669
    807766 8fsq:A (1.76) BS01 peptide ? GO:0006857 ... P33913 39739799
    807767 8fsq:A (1.76) BS02 7MO ? GO:0006857 ... P33913 39739799
    807768 8fsr:A (1.78) BS01 peptide ? N/A N/A 39739799
    807769 8fss:A (2.0) BS01 peptide ? GO:0006857 ... P33913 39739799
    807770 8fss:A (2.0) BS02 7MO ? GO:0006857 ... P33913 39739799
    807771 8fsz:A (3.79) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807772 8fsz:A (3.79) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807773 8fsz:B (3.79) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807774 8fsz:B (3.79) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807775 8fsz:C (3.79) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807776 8fsz:C (3.79) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807777 8fsz:D (3.79) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807778 8fsz:D (3.79) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807779 8fsz:E (3.79) BS01 Y7H ? GO:0004888 ... P23979 38177669
    807780 8fsz:E (3.79) BS02 Y7H ? GO:0004888 ... P23979 38177669
    807781 8ft4:A (4.0) BS01 LEU ? GO:0005886 ... O67854 N/A
    807782 8ft5:A (3.8) BS01 LEU ? GO:0005886 ... O67854 N/A
    807783 8ft7:A (2.15) BS01 SAH ? GO:0016274 ... A0A6A5BBK9 N/A
    807784 8ft7:B (2.15) BS01 SAH ? GO:0016274 ... A0A6A5BBK9 N/A
    807785 8fta:A (1.78) BS01 Y8X ? GO:0006338 ... Q86U86 N/A
    807786 8fta:A (1.78) BS02 ZN ? GO:0006338 ... Q86U86 N/A
    807787 8ftc:A (2.0) BS01 Y8O 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38144257
    807788 8ftd:I (2.76) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 38177674
    807789 8ftd:I (2.76) BS02 1N7 2.7.7.6 GO:0000345 ... P0A8V2 38177674
    807790 8ftd:J (2.76) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    807791 8ftd:J (2.76) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    807792 8ftd:J (2.76) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    807793 8ftd:J (2.76) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    807794 8ftd:J (2.76) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    807795 8ftd:J (2.76) BS06 1N7 2.7.7.6 GO:0000287 ... P0A8T7 38177674
    807796 8ftd:L (2.76) BS01 dna ? GO:0000345 ... P00579 38177674
    807797 8ftd:L (2.76) BS02 dna ? GO:0000345 ... P00579 38177674
    807798 8ftd:L (2.76) BS03 1N7 ? GO:0000345 ... P00579 38177674
    807799 8ftd:R (2.76) BS01 dna 2.7.7.6 GO:0000345 ... P0A7Z4 38177674
    807800 8ftd:R (2.76) BS02 dna 2.7.7.6 GO:0000345 ... P0A7Z4 38177674

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).