SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    808001 8fum:H (1.48) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    808002 8fun:A (2.24) BS01 MN ? GO:0005737 ... A0A402C2V4 37471626
    808003 8fun:B (2.24) BS01 MN ? GO:0005737 ... A0A402C2Q3 37471626
    808004 8fun:B (2.24) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    808005 8fun:C (2.24) BS01 MN ? GO:0005737 ... A0A402C2V4 37471626
    808006 8fun:D (2.24) BS01 MN ? GO:0005737 ... A0A402C2Q3 37471626
    808007 8fun:D (2.24) BS02 MN ? GO:0005737 ... A0A402C2Q3 37471626
    808008 8fuo:A (2.43) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    808009 8fuo:B (2.43) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    808010 8fuo:B (2.43) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    808011 8fuo:C (2.43) BS01 FE ? GO:0005737 ... A0A402C2V4 37471626
    808012 8fuo:D (2.43) BS01 FE ? GO:0005737 ... A0A402C2Q3 37471626
    808013 8fuo:D (2.43) BS02 FE ? GO:0005737 ... A0A402C2Q3 37471626
    808014 8fup:A (1.7) BS01 N6I 2.3.1.-
    2.3.1.48
    N/A Q92793 N/A
    808015 8fup:A (1.7) BS02 JHL 2.3.1.-
    2.3.1.48
    N/A Q92793 N/A
    808016 8fup:B (1.7) BS01 JHL 2.3.1.-
    2.3.1.48
    N/A Q92793 N/A
    808017 8fur:A (2.285) BS01 Y9X 1.13.11.52 GO:0002376 ... P14902 37054759
    808018 8fur:B (2.285) BS01 Y9X 1.13.11.52 GO:0002376 ... P14902 37054759
    808019 8fur:C (2.285) BS01 Y9X 1.13.11.52 GO:0002376 ... P14902 37054759
    808020 8fur:D (2.285) BS01 Y9X 1.13.11.52 GO:0002376 ... P14902 37054759
    808021 8fuw:A (1.9) BS01 C5P ? GO:0000271 ... A0A0H2Z2W8 36924942
    808022 8fux:A (1.2) BS01 KD3 ? GO:0000271 ... A0A0H2Z2W8 36924942
    808023 8fux:A (1.2) BS02 KD3 ? GO:0000271 ... A0A0H2Z2W8 36924942
    808024 8fux:A (1.2) BS03 C5P ? GO:0000271 ... A0A0H2Z2W8 36924942
    808025 8fux:A (1.2) BS04 PXV ? GO:0000271 ... A0A0H2Z2W8 36924942
    808026 8fux:B (1.2) BS01 PXV ? GO:0000271 ... A0A0H2Z2W8 36924942
    808027 8fux:B (1.2) BS02 KD3 ? GO:0000271 ... A0A0H2Z2W8 36924942
    808028 8fux:B (1.2) BS03 KD3 ? GO:0000271 ... A0A0H2Z2W8 36924942
    808029 8fuz:A (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    808030 8fuz:A (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    808031 8fuz:B (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    808032 8fuz:B (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    808033 8fuz:C (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    808034 8fuz:C (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    808035 8fuz:D (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    808036 8fuz:D (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    808037 8fuz:E (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    808038 8fuz:E (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    808039 8fuz:F (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    808040 8fuz:F (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    808041 8fuz:G (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    808042 8fuz:G (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    808043 8fuz:H (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    808044 8fuz:H (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    808045 8fv2:A (1.87) BS01 JHL 2.3.1.-
    2.3.1.48
    N/A Q92793 38664416
    808046 8fv2:B (1.87) BS01 JHL 2.3.1.-
    2.3.1.48
    N/A Q92793 38664416
    808047 8fv2:B (1.87) BS02 JHL 2.3.1.-
    2.3.1.48
    N/A Q92793 38664416
    808048 8fv2:C (1.87) BS01 JHL 2.3.1.-
    2.3.1.48
    N/A Q92793 38664416
    808049 8fv2:C (1.87) BS02 JHL 2.3.1.-
    2.3.1.48
    N/A Q92793 38664416
    808050 8fv2:D (1.87) BS01 JHL 2.3.1.-
    2.3.1.48
    N/A Q92793 38664416
    808051 8fv3:A (2.1) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    808052 8fv3:A (2.1) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 38378740
    808053 8fv3:B (2.1) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    808054 8fv3:B (2.1) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 38378740
    808055 8fv3:C (2.1) BS01 YA6 2.7.10.1 GO:0004672 ... P00533 38378740
    808056 8fv3:D (2.1) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    808057 8fv3:D (2.1) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 38378740
    808058 8fv4:A (2.2) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    808059 8fv4:A (2.2) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 38378740
    808060 8fv4:C (2.2) BS01 MG 2.7.10.1 GO:0004672 ... P00533 38378740
    808061 8fv4:C (2.2) BS02 ANP 2.7.10.1 GO:0004672 ... P00533 38378740
    808062 8fv4:D (2.2) BS01 YAA 2.7.10.1 GO:0004672 ... P00533 38378740
    808063 8fv5:A (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808064 8fv5:B (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808065 8fv5:C (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808066 8fv5:D (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808067 8fv5:I (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808068 8fv5:J (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808069 8fv5:K (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808070 8fv5:L (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808071 8fv5:M (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808072 8fv5:N (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808073 8fv5:O (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808074 8fv5:P (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808075 8fv5:Q (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808076 8fv5:R (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808077 8fv5:S (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808078 8fv5:T (4.21) BS01 peptide ? GO:0005515 ... F8SJT5
    P0AEX9
    36807264
    808079 8fv6:AAA (2.25) BS01 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808080 8fv6:AAA (2.25) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808081 8fv6:BBB (2.25) BS01 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808082 8fv6:BBB (2.25) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808083 8fv7:AAA (2.08) BS01 ATP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808084 8fv7:AAA (2.08) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808085 8fv7:AAA (2.08) BS03 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808086 8fv7:BBB (2.08) BS01 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808087 8fv7:BBB (2.08) BS02 ATP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808088 8fv7:BBB (2.08) BS03 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808089 8fv8:AAA (2.05) BS01 ADP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808090 8fv8:AAA (2.05) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808091 8fv8:AAA (2.05) BS03 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808092 8fv8:BBB (2.05) BS01 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808093 8fv8:BBB (2.05) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808094 8fv8:BBB (2.05) BS03 ADP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808095 8fv9:AAA (1.991) BS01 80J 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808096 8fv9:AAA (1.991) BS02 80J 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808097 8fv9:BBB (1.991) BS01 80J 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808098 8fv9:BBB (1.991) BS02 80J 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808099 8fva:AAA (2.4) BS01 1TK 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808100 8fva:AAA (2.4) BS02 1TK 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808101 8fva:BBB (2.4) BS01 1TK 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808102 8fva:BBB (2.4) BS02 1TK 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808103 8fvb:AAA (2.03) BS01 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808104 8fvb:AAA (2.03) BS02 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808105 8fvb:BBB (2.03) BS01 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808106 8fvb:BBB (2.03) BS02 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808107 8fvc:AAA (2.281) BS01 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808108 8fvc:AAA (2.281) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808109 8fvc:BBB (2.281) BS01 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808110 8fvc:BBB (2.281) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808111 8fvd:A (2.38) BS01 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808112 8fvd:A (2.38) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808113 8fvd:B (2.38) BS01 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808114 8fvd:B (2.38) BS02 GTF 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808115 8fve:A (2.4) BS01 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808116 8fve:A (2.4) BS02 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808117 8fve:B (2.4) BS01 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808118 8fve:B (2.4) BS02 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    808119 8fvf:A (2.1) BS01 JHL 2.3.1.-
    2.3.1.48
    N/A Q09472 38664416
    808120 8fvf:B (2.1) BS01 JHL 2.3.1.-
    2.3.1.48
    N/A Q09472 38664416
    808121 8fvi:1 (3.24) BS01 ZN ? GO:0003723 ... P12504 37640699
    808122 8fvi:A (3.24) BS01 rna 3.5.4.38 GO:0000932 ... Q6NTF7 37640699
    808123 8fvi:A (3.24) BS02 rna 3.5.4.38 GO:0000932 ... Q6NTF7 37640699
    808124 8fvi:A (3.24) BS03 ZN 3.5.4.38 GO:0000932 ... Q6NTF7 37640699
    808125 8fvj:1 (3.54) BS01 ZN ? GO:0003723 ... P12504 37640699
    808126 8fvj:6 (3.54) BS01 ZN ? GO:0003723 ... P12504 37640699
    808127 8fvk:A (1.53) BS01 JHL ? N/A O60885 38664416
    808128 8fvk:B (1.53) BS01 JHL ? N/A O60885 38664416
    808129 8fvl:A (1.961) BS01 peptide N/A N/A Q8NBP7 N/A
    808130 8fvl:B (1.961) BS01 peptide N/A N/A Q8NBP7 N/A
    808131 8fvm:A (2.852) BS01 peptide N/A N/A Q8NBP7 N/A
    808132 8fvm:B (2.852) BS01 peptide N/A N/A Q8NBP7 N/A
    808133 8fvm:B (2.852) BS02 CA N/A N/A Q8NBP7 N/A
    808134 8fvn:A (2.71) BS01 peptide N/A N/A Q8NBP7 N/A
    808135 8fvn:B (2.71) BS01 peptide N/A N/A Q8NBP7 N/A
    808136 8fvo:A (2.652) BS01 peptide N/A N/A Q8NBP7 N/A
    808137 8fvo:B (2.652) BS01 peptide N/A N/A Q8NBP7 N/A
    808138 8fvp:A (2.602) BS01 peptide N/A N/A Q8NBP7 N/A
    808139 8fvp:B (2.602) BS01 peptide N/A N/A Q8NBP7 N/A
    808140 8fvp:B (2.602) BS02 CA N/A N/A Q8NBP7 N/A
    808141 8fvq:A (2.57) BS01 peptide N/A N/A Q8NBP7 N/A
    808142 8fvq:B (2.57) BS01 peptide N/A N/A Q8NBP7 N/A
    808143 8fvr:F (2.42) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36997761
    808144 8fvr:F (2.42) BS02 rna 2.7.7.6 GO:0000345 ... P0A8V2 36997761
    808145 8fvr:F (2.42) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 36997761
    808146 8fvr:G (2.42) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808147 8fvr:G (2.42) BS02 rna 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808148 8fvr:G (2.42) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808149 8fvr:G (2.42) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808150 8fvr:G (2.42) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808151 8fvr:G (2.42) BS06 MG 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808152 8fvs:A (1.75) BS01 YBE 2.3.1.48 N/A I3L466 38664416
    808153 8fvs:B (1.75) BS01 YBE 2.3.1.48 N/A I3L466 38664416
    808154 8fvu:A (3.6) BS01 ATP ? GO:0002221 ... Q13075 38177670
    808155 8fvu:A (3.6) BS02 ZN ? GO:0002221 ... Q13075 38177670
    808156 8fvu:A (3.6) BS03 ZN ? GO:0002221 ... Q13075 38177670
    808157 8fvu:A (3.6) BS04 ZN ? GO:0002221 ... Q13075 38177670
    808158 8fvv:A (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    808159 8fvv:A (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    808160 8fvv:B (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    808161 8fvv:B (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    808162 8fvv:C (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    808163 8fvv:C (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    808164 8fvv:D (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    808165 8fvv:D (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    808166 8fvv:E (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    808167 8fvv:E (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    808168 8fvv:F (1.93) BS01 FE ? GO:0016491 ... Q63J79 N/A
    808169 8fvv:F (1.93) BS02 FE ? GO:0016491 ... Q63J79 N/A
    808170 8fvw:F (2.1) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 36997761
    808171 8fvw:F (2.1) BS02 rna 2.7.7.6 GO:0000345 ... P0A8V2 36997761
    808172 8fvw:F (2.1) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 36997761
    808173 8fvw:G (2.1) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808174 8fvw:G (2.1) BS02 rna 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808175 8fvw:G (2.1) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808176 8fvw:G (2.1) BS04 G4P 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808177 8fvw:G (2.1) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808178 8fvw:G (2.1) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808179 8fvw:G (2.1) BS07 MG 2.7.7.6 GO:0000287 ... P0A8T7 36997761
    808180 8fvw:H (2.1) BS01 G4P 2.7.7.6 GO:0000345 ... P0A800 36997761
    808181 8fvy:A (2.94) BS01 rna ? GO:0000028 ... A8BE86 38242118
    808182 8fvy:B (2.94) BS01 rna ? GO:0003735 ... A8BS79 38242118
    808183 8fvy:C (2.94) BS01 rna ? GO:0003723 ... A8BMZ1 38242118
    808184 8fvy:D (2.94) BS01 rna ? GO:0003723 ... A8B8Z2 38242118
    808185 8fvy:E (2.94) BS01 rna ? GO:0003723 ... A8BFE3 38242118
    808186 8fvy:F (2.94) BS01 rna ? GO:0000028 ... A8BZD3 38242118
    808187 8fvy:F (2.94) BS02 rna ? GO:0000028 ... A8BZD3 38242118
    808188 8fvy:G (2.94) BS01 rna ? GO:0003735 ... A8B6L8 38242118
    808189 8fvy:H (2.94) BS01 rna ? GO:0003735 ... V6TBA3 38242118
    808190 8fvy:I (2.94) BS01 rna ? GO:0000462 ... A8B252 38242118
    808191 8fvy:J (2.94) BS01 rna ? GO:0003723 ... A8BKS8 38242118
    808192 8fvy:K (2.94) BS01 rna ? GO:0003723 ... A8BRX3 38242118
    808193 8fvy:L (2.94) BS01 rna ? GO:0003735 ... V6TF82 38242118
    808194 8fvy:M (2.94) BS01 rna ? GO:0003735 ... A8BUG8 38242118
    808195 8fvy:N (2.94) BS01 rna ? GO:0003735 ... A8BE02 38242118
    808196 8fvy:O (2.94) BS01 rna ? GO:0000028 ... E2RU83 38242118
    808197 8fvy:P (2.94) BS01 rna ? GO:0000028 ... A8BBP3 38242118
    808198 8fvy:Q (2.94) BS01 rna ? GO:0000462 ... A8BKC6 38242118
    808199 8fvy:R (2.94) BS01 rna ? GO:0003735 ... A8BRG5 38242118
    808200 8fvy:S (2.94) BS01 rna ? GO:0003676 ... A8BZ58 38242118

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).