SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    808801 8fku:LT (2.82) BS02 MG ? GO:0002181 ... P18077 37410842
    808802 8fku:LU (2.82) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    808803 8fku:LW (2.82) BS01 rna ? GO:0000448 ... P61927 37410842
    808804 8fku:LW (2.82) BS02 rna ? GO:0000448 ... P61927 37410842
    808805 8fku:LW (2.82) BS03 ZN ? GO:0000448 ... P61927 37410842
    808806 8fku:NB (2.82) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    808807 8fku:NF (2.82) BS01 rna ? GO:0000460 ... O95478 37410842
    808808 8fku:NH (2.82) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    808809 8fku:NI (2.82) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    808810 8fku:NI (2.82) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    808811 8fku:NK (2.82) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    808812 8fku:SA (2.82) BS01 rna ? GO:0002181 ... P36578 37410842
    808813 8fku:SA (2.82) BS02 rna ? GO:0002181 ... P36578 37410842
    808814 8fku:SC (2.82) BS01 rna ? GO:0002181 ... Q02878 37410842
    808815 8fku:SD (2.82) BS01 rna ? GO:0000463 ... P18124 37410842
    808816 8fku:SE (2.82) BS01 rna ? GO:0000470 ... P62424 37410842
    808817 8fku:SE (2.82) BS02 rna ? GO:0000470 ... P62424 37410842
    808818 8fku:SG (2.82) BS01 rna ? GO:0002181 ... P32969 37410842
    808819 8fku:SH (2.82) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    808820 8fku:SI (2.82) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    808821 8fku:SI (2.82) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    808822 8fku:SI (2.82) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    808823 8fku:SJ (2.82) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    808824 8fku:SK (2.82) BS01 rna ? GO:0000054 ... P56537 37410842
    808825 8fku:SL (2.82) BS01 rna ? GO:0001649 ... O76021 37410842
    808826 8fku:SM (2.82) BS01 rna ? GO:0000463 ... O00541 37410842
    808827 8fku:SM (2.82) BS02 rna ? GO:0000463 ... O00541 37410842
    808828 8fku:SN (2.82) BS01 rna ? GO:0003723 ... Q99848 37410842
    808829 8fku:SO (2.82) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    808830 8fku:SQ (2.82) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    808831 8fku:SR (2.82) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    808832 8fku:SR (2.82) BS02 GDP ? GO:0001649 ... Q9BZE4 37410842
    808833 8fku:SR (2.82) BS03 MG ? GO:0001649 ... Q9BZE4 37410842
    808834 8fku:SS (2.82) BS01 rna ? GO:0000027 ... Q14137 37410842
    808835 8fku:ST (2.82) BS01 rna ? GO:0000027 ... Q15050 37410842
    808836 8fku:SV (2.82) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    808837 8fku:SV (2.82) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    808838 8fku:SW (2.82) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    808839 8fku:SY (2.82) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    808840 8fku:SZ (2.82) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    808841 8fkv:BA (2.47) BS01 rna ? GO:0002181 ... P30050 37410842
    808842 8fkv:BB (2.47) BS01 rna ? GO:0002181 ... P62906 37410842
    808843 8fkv:L6 (2.47) BS01 rna ? GO:0002181 ... P26373 37410842
    808844 8fkv:L6 (2.47) BS02 rna ? GO:0002181 ... P26373 37410842
    808845 8fkv:L7 (2.47) BS01 rna ? GO:0002181 ... P40429 37410842
    808846 8fkv:L8 (2.47) BS01 rna ? GO:0002181 ... P50914 37410842
    808847 8fkv:L9 (2.47) BS01 rna ? GO:0002181 ... P61313 37410842
    808848 8fkv:L9 (2.47) BS02 rna ? GO:0002181 ... P61313 37410842
    808849 8fkv:L9 (2.47) BS03 MG ? GO:0002181 ... P61313 37410842
    808850 8fkv:LA (2.47) BS01 rna ? GO:0002181 ... P18621 37410842
    808851 8fkv:LA (2.47) BS02 rna ? GO:0002181 ... P18621 37410842
    808852 8fkv:LB (2.47) BS01 rna ? GO:0002181 ... Q07020 37410842
    808853 8fkv:LC (2.47) BS01 rna ? GO:0002181 ... Q02543 37410842
    808854 8fkv:LE (2.47) BS01 rna ? GO:0001650 ... P46778 37410842
    808855 8fkv:LG (2.47) BS01 rna ? GO:0000122 ... P62829 37410842
    808856 8fkv:LH (2.47) BS01 rna ? GO:0002181 ... P62750 37410842
    808857 8fkv:LH (2.47) BS02 rna ? GO:0002181 ... P62750 37410842
    808858 8fkv:LI (2.47) BS01 rna ? GO:0002181 ... P61254 37410842
    808859 8fkv:LI (2.47) BS02 rna ? GO:0002181 ... P61254 37410842
    808860 8fkv:LK (2.47) BS01 rna ? GO:0002181 ... P46776 37410842
    808861 8fkv:LN (2.47) BS01 rna ? GO:0002181 ... P39023 37410842
    808862 8fkv:LP (2.47) BS01 rna ? GO:0002181 ... P62899 37410842
    808863 8fkv:LQ (2.47) BS01 rna ? GO:0002181 ... P62910 37410842
    808864 8fkv:LS (2.47) BS01 rna ? GO:0000463 ... P42766 37410842
    808865 8fkv:LS (2.47) BS02 rna ? GO:0000463 ... P42766 37410842
    808866 8fkv:LT (2.47) BS01 rna ? GO:0002181 ... P18077 37410842
    808867 8fkv:LT (2.47) BS02 MG ? GO:0002181 ... P18077 37410842
    808868 8fkv:LU (2.47) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    808869 8fkv:LW (2.47) BS01 rna ? GO:0000448 ... P61927 37410842
    808870 8fkv:LW (2.47) BS02 rna ? GO:0000448 ... P61927 37410842
    808871 8fkv:LW (2.47) BS03 ZN ? GO:0000448 ... P61927 37410842
    808872 8fkv:NB (2.47) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    808873 8fkv:NF (2.47) BS01 rna ? GO:0000460 ... O95478 37410842
    808874 8fkv:NH (2.47) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    808875 8fkv:NI (2.47) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    808876 8fkv:NI (2.47) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    808877 8fkv:NK (2.47) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    808878 8fkv:NM (2.47) BS01 rna ? GO:0000460 ... Q9BXY0 37410842
    808879 8fkv:NM (2.47) BS02 SF4 ? GO:0000460 ... Q9BXY0 37410842
    808880 8fkv:NO (2.47) BS01 rna ? GO:0003713 ... P56182 37410842
    808881 8fkv:NQ (2.47) BS01 rna ? GO:0000176 ... Q6RFH5 37410842
    808882 8fkv:NS (2.47) BS01 rna ? GO:0000460 ... Q9H9Y2 37410842
    808883 8fkv:NS (2.47) BS02 rna ? GO:0000460 ... Q9H9Y2 37410842
    808884 8fkv:SA (2.47) BS01 rna ? GO:0002181 ... P36578 37410842
    808885 8fkv:SA (2.47) BS02 rna ? GO:0002181 ... P36578 37410842
    808886 8fkv:SC (2.47) BS01 rna ? GO:0002181 ... Q02878 37410842
    808887 8fkv:SD (2.47) BS01 rna ? GO:0000463 ... P18124 37410842
    808888 8fkv:SE (2.47) BS01 rna ? GO:0000470 ... P62424 37410842
    808889 8fkv:SE (2.47) BS02 rna ? GO:0000470 ... P62424 37410842
    808890 8fkv:SE (2.47) BS03 rna ? GO:0000470 ... P62424 37410842
    808891 8fkv:SG (2.47) BS01 rna ? GO:0002181 ... P32969 37410842
    808892 8fkv:SH (2.47) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    808893 8fkv:SI (2.47) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    808894 8fkv:SI (2.47) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    808895 8fkv:SI (2.47) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    808896 8fkv:SJ (2.47) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    808897 8fkv:SK (2.47) BS01 rna ? GO:0000054 ... P56537 37410842
    808898 8fkv:SL (2.47) BS01 rna ? GO:0001649 ... O76021 37410842
    808899 8fkv:SM (2.47) BS01 rna ? GO:0000463 ... O00541 37410842
    808900 8fkv:SM (2.47) BS02 rna ? GO:0000463 ... O00541 37410842
    808901 8fkv:SN (2.47) BS01 rna ? GO:0003723 ... Q99848 37410842
    808902 8fkv:SO (2.47) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    808903 8fkv:SQ (2.47) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    808904 8fkv:SR (2.47) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    808905 8fkv:SR (2.47) BS02 GDP ? GO:0001649 ... Q9BZE4 37410842
    808906 8fkv:SR (2.47) BS03 MG ? GO:0001649 ... Q9BZE4 37410842
    808907 8fkv:SS (2.47) BS01 rna ? GO:0000027 ... Q14137 37410842
    808908 8fkv:ST (2.47) BS01 rna ? GO:0000027 ... Q15050 37410842
    808909 8fkv:SU (2.47) BS01 rna ? GO:0003682 ... Q8WTT2 37410842
    808910 8fkv:SU (2.47) BS02 MG ? GO:0003682 ... Q8WTT2 37410842
    808911 8fkv:SV (2.47) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    808912 8fkv:SV (2.47) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    808913 8fkv:SW (2.47) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    808914 8fkv:SY (2.47) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    808915 8fkv:SZ (2.47) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    808916 8fkv:SZ (2.47) BS02 rna ? GO:0003723 ... Q9Y3C1 37410842
    808917 8fkw:BA (2.5) BS01 rna ? GO:0002181 ... P30050 37410842
    808918 8fkw:BB (2.5) BS01 rna ? GO:0002181 ... P62906 37410842
    808919 8fkw:L6 (2.5) BS01 rna ? GO:0002181 ... P26373 37410842
    808920 8fkw:L6 (2.5) BS02 rna ? GO:0002181 ... P26373 37410842
    808921 8fkw:L7 (2.5) BS01 rna ? GO:0002181 ... P40429 37410842
    808922 8fkw:L8 (2.5) BS01 rna ? GO:0002181 ... P50914 37410842
    808923 8fkw:L9 (2.5) BS01 rna ? GO:0002181 ... P61313 37410842
    808924 8fkw:L9 (2.5) BS02 rna ? GO:0002181 ... P61313 37410842
    808925 8fkw:L9 (2.5) BS03 MG ? GO:0002181 ... P61313 37410842
    808926 8fkw:LA (2.5) BS01 rna ? GO:0002181 ... P18621 37410842
    808927 8fkw:LA (2.5) BS02 rna ? GO:0002181 ... P18621 37410842
    808928 8fkw:LB (2.5) BS01 rna ? GO:0002181 ... Q07020 37410842
    808929 8fkw:LC (2.5) BS01 rna ? GO:0002181 ... Q02543 37410842
    808930 8fkw:LE (2.5) BS01 rna ? GO:0001650 ... P46778 37410842
    808931 8fkw:LG (2.5) BS01 rna ? GO:0000122 ... P62829 37410842
    808932 8fkw:LH (2.5) BS01 rna ? GO:0002181 ... P62750 37410842
    808933 8fkw:LH (2.5) BS02 rna ? GO:0002181 ... P62750 37410842
    808934 8fkw:LI (2.5) BS01 rna ? GO:0002181 ... P61254 37410842
    808935 8fkw:LI (2.5) BS02 rna ? GO:0002181 ... P61254 37410842
    808936 8fkw:LK (2.5) BS01 rna ? GO:0002181 ... P46776 37410842
    808937 8fkw:LL (2.5) BS01 rna ? GO:0002181 ... P46779 37410842
    808938 8fkw:LN (2.5) BS01 rna ? GO:0002181 ... P39023 37410842
    808939 8fkw:LP (2.5) BS01 rna ? GO:0002181 ... P62899 37410842
    808940 8fkw:LQ (2.5) BS01 rna ? GO:0002181 ... P62910 37410842
    808941 8fkw:LQ (2.5) BS02 MG ? GO:0002181 ... P62910 37410842
    808942 8fkw:LS (2.5) BS01 rna ? GO:0000463 ... P42766 37410842
    808943 8fkw:LS (2.5) BS02 rna ? GO:0000463 ... P42766 37410842
    808944 8fkw:LT (2.5) BS01 rna ? GO:0002181 ... P18077 37410842
    808945 8fkw:LT (2.5) BS02 MG ? GO:0002181 ... P18077 37410842
    808946 8fkw:LU (2.5) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    808947 8fkw:LW (2.5) BS01 rna ? GO:0000448 ... P61927 37410842
    808948 8fkw:LW (2.5) BS02 rna ? GO:0000448 ... P61927 37410842
    808949 8fkw:LW (2.5) BS03 ZN ? GO:0000448 ... P61927 37410842
    808950 8fkw:NB (2.5) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    808951 8fkw:NF (2.5) BS01 rna ? GO:0000460 ... O95478 37410842
    808952 8fkw:NH (2.5) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    808953 8fkw:NI (2.5) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    808954 8fkw:NI (2.5) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    808955 8fkw:NK (2.5) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    808956 8fkw:SA (2.5) BS01 rna ? GO:0002181 ... P36578 37410842
    808957 8fkw:SA (2.5) BS02 rna ? GO:0002181 ... P36578 37410842
    808958 8fkw:SC (2.5) BS01 rna ? GO:0002181 ... Q02878 37410842
    808959 8fkw:SD (2.5) BS01 rna ? GO:0000463 ... P18124 37410842
    808960 8fkw:SE (2.5) BS01 rna ? GO:0000470 ... P62424 37410842
    808961 8fkw:SE (2.5) BS02 rna ? GO:0000470 ... P62424 37410842
    808962 8fkw:SE (2.5) BS03 rna ? GO:0000470 ... P62424 37410842
    808963 8fkw:SG (2.5) BS01 rna ? GO:0002181 ... P32969 37410842
    808964 8fkw:SH (2.5) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    808965 8fkw:SI (2.5) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    808966 8fkw:SI (2.5) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    808967 8fkw:SI (2.5) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    808968 8fkw:SJ (2.5) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    808969 8fkw:SK (2.5) BS01 rna ? GO:0000054 ... P56537 37410842
    808970 8fkw:SL (2.5) BS01 rna ? GO:0001649 ... O76021 37410842
    808971 8fkw:SM (2.5) BS01 rna ? GO:0000463 ... O00541 37410842
    808972 8fkw:SM (2.5) BS02 rna ? GO:0000463 ... O00541 37410842
    808973 8fkw:SN (2.5) BS01 rna ? GO:0003723 ... Q99848 37410842
    808974 8fkw:SO (2.5) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    808975 8fkw:SQ (2.5) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    808976 8fkw:SR (2.5) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    808977 8fkw:SR (2.5) BS02 GDP ? GO:0001649 ... Q9BZE4 37410842
    808978 8fkw:SR (2.5) BS03 MG ? GO:0001649 ... Q9BZE4 37410842
    808979 8fkw:SS (2.5) BS01 rna ? GO:0000027 ... Q14137 37410842
    808980 8fkw:ST (2.5) BS01 rna ? GO:0000027 ... Q15050 37410842
    808981 8fkw:SU (2.5) BS01 rna ? GO:0003682 ... Q8WTT2 37410842
    808982 8fkw:SU (2.5) BS02 MG ? GO:0003682 ... Q8WTT2 37410842
    808983 8fkw:SV (2.5) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    808984 8fkw:SV (2.5) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    808985 8fkw:SW (2.5) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    808986 8fkw:SY (2.5) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    808987 8fkw:SZ (2.5) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    808988 8fkw:SZ (2.5) BS02 rna ? GO:0003723 ... Q9Y3C1 37410842
    808989 8fkx:BA (2.59) BS01 rna ? GO:0002181 ... P30050 37410842
    808990 8fkx:BB (2.59) BS01 rna ? GO:0002181 ... P62906 37410842
    808991 8fkx:L6 (2.59) BS01 rna ? GO:0002181 ... P26373 37410842
    808992 8fkx:L6 (2.59) BS02 rna ? GO:0002181 ... P26373 37410842
    808993 8fkx:L7 (2.59) BS01 rna ? GO:0002181 ... P40429 37410842
    808994 8fkx:L8 (2.59) BS01 rna ? GO:0002181 ... P50914 37410842
    808995 8fkx:L9 (2.59) BS01 rna ? GO:0002181 ... P61313 37410842
    808996 8fkx:L9 (2.59) BS02 rna ? GO:0002181 ... P61313 37410842
    808997 8fkx:L9 (2.59) BS03 MG ? GO:0002181 ... P61313 37410842
    808998 8fkx:LA (2.59) BS01 rna ? GO:0002181 ... P18621 37410842
    808999 8fkx:LA (2.59) BS02 rna ? GO:0002181 ... P18621 37410842
    809000 8fkx:LB (2.59) BS01 rna ? GO:0002181 ... Q07020 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).