SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    808801 8fyw:B (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808802 8fyw:C (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808803 8fyw:D (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808804 8fyw:E (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808805 8fyw:F (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808806 8fyw:G (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808807 8fyw:H (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808808 8fyw:I (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808809 8fyw:J (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808810 8fyw:K (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808811 8fyw:L (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808812 8fyw:M (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808813 8fyw:N (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808814 8fyw:O (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808815 8fyw:P (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808816 8fyw:Q (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808817 8fyw:R (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808818 8fyw:S (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808819 8fyw:T (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808820 8fyw:U (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808821 8fyw:V (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808822 8fyw:W (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808823 8fyw:X (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808824 8fyw:Y (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808825 8fyw:Z (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808826 8fyw:a (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808827 8fyw:b (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808828 8fyw:c (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808829 8fyw:d (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808830 8fyw:e (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808831 8fyw:f (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808832 8fyw:g (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808833 8fyw:h (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808834 8fyw:i (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808835 8fyw:j (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808836 8fyw:k (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808837 8fyw:l (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808838 8fyw:m (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808839 8fyw:n (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808840 8fyw:o (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808841 8fyw:p (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808842 8fyw:q (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808843 8fyw:r (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808844 8fyw:s (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808845 8fyw:t (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808846 8fyw:u (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808847 8fyw:v (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808848 8fyw:w (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808849 8fyw:x (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808850 8fyw:y (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808851 8fyw:z (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    808852 8fyx:R (2.62) BS01 YLX ? GO:0001586 ... P08908
    P0ABE7
    38720072
    808853 8fyx:R (2.62) BS02 J40 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    808854 8fyx:R (2.62) BS03 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    808855 8fyx:R (2.62) BS04 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    808856 8fyy:A (2.8) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808857 8fyy:A (2.8) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808858 8fyy:A (2.8) BS03 YH0 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808859 8fyz:A (3.4) BS01 YNQ 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808860 8fyz:B (3.4) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808861 8fyz:B (3.4) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808862 8fyz:B (3.4) BS03 YNQ 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808863 8fz1:A (2.7) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808864 8fz1:A (2.7) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808865 8fz1:A (2.7) BS03 YVB 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808866 8fz1:B (2.7) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808867 8fz1:B (2.7) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808868 8fz1:B (2.7) BS03 YVB 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    808869 8fz2:H (3.5) BS01 peptide N/A N/A N/A 37940661
    808870 8fz2:L (3.5) BS01 peptide N/A N/A N/A 37940661
    808871 8fz4:A (2.19) BS01 MG ? N/A P58335 37747038
    808872 8fz4:B (2.19) BS01 MG ? N/A P58335 37747038
    808873 8fz7:A (2.88) BS01 PGW ? GO:0005886 ... O27564 37653172
    808874 8fz7:A (2.88) BS02 PGW ? GO:0005886 ... O27564 37653172
    808875 8fz7:C (2.88) BS01 PGW ? GO:0005886 ... O27564 37653172
    808876 8fz7:C (2.88) BS02 PGW ? GO:0005886 ... O27564 37653172
    808877 8fz7:E (2.88) BS01 PGW ? GO:0005886 ... O27564 37653172
    808878 8fz7:E (2.88) BS02 PGW ? GO:0005886 ... O27564 37653172
    808879 8fz7:G (2.88) BS01 PGW ? GO:0005886 ... O27564 37653172
    808880 8fz8:A (1.43) BS01 HEM ? GO:0004497 ... A0A5P2W9N6 38511621
    808881 8fz8:A (1.43) BS02 OCA ? GO:0004497 ... A0A5P2W9N6 38511621
    808882 8fzb:A (3.35) BS01 SAH 2.1.1.- GO:0005515 ... Q96G04 37209825
    808883 8fzb:B (3.35) BS01 SAH 2.1.1.- GO:0005515 ... Q96G04 37209825
    808884 8fzb:C (3.35) BS01 SAH 2.1.1.- GO:0005515 ... Q96G04 37209825
    808885 8fzd:1 (3.1) BS01 rna N/A GO:0000027 ... P0A7M6 39030416
    808886 8fzd:2 (3.1) BS01 rna N/A GO:0000027 ... P0AG51 39030416
    808887 8fzd:3 (3.1) BS01 rna N/A GO:0002181 ... P0A7M9 39030416
    808888 8fzd:3 (3.1) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    808889 8fzd:4 (3.1) BS01 rna N/A GO:0000027 ... P0A7N4 39030416
    808890 8fzd:5 (3.1) BS01 rna N/A GO:0000027 ... P0A7N9 39030416
    808891 8fzd:6 (3.1) BS01 rna N/A GO:0002181 ... P0A7P5 39030416
    808892 8fzd:7 (3.1) BS01 rna N/A GO:0002181 ... P0A7Q1 39030416
    808893 8fzd:8 (3.1) BS01 rna N/A GO:0002181 ... P0A7Q6 39030416
    808894 8fzd:8 (3.1) BS02 ZN N/A GO:0002181 ... P0A7Q6 39030416
    808895 8fzd:C (3.1) BS01 rna N/A GO:0000027 ... P60422 39030416
    808896 8fzd:C (3.1) BS02 MG N/A GO:0000027 ... P60422 39030416
    808897 8fzd:D (3.1) BS01 rna N/A GO:0000027 ... P60438 39030416
    808898 8fzd:E (3.1) BS01 rna N/A GO:0001070 ... P60723 39030416
    808899 8fzd:F (3.1) BS01 rna N/A GO:0000027 ... P62399 39030416
    808900 8fzd:F (3.1) BS02 rna N/A GO:0000027 ... P62399 39030416
    808901 8fzd:F (3.1) BS03 rna N/A GO:0000027 ... P62399 39030416
    808902 8fzd:G (3.1) BS01 rna N/A GO:0000027 ... P0AG55 39030416
    808903 8fzd:H (3.1) BS01 rna N/A GO:0002181 ... P0A7R1 39030416
    808904 8fzd:I (3.1) BS01 rna N/A GO:0002181 ... P0A7J3 39030416
    808905 8fzd:J (3.1) BS01 rna N/A GO:0000027 ... P0A7J7 39030416
    808906 8fzd:L (3.1) BS01 rna N/A GO:0002181 ... P0AA10 39030416
    808907 8fzd:M (3.1) BS01 rna N/A GO:0002181 ... P0ADY3 39030416
    808908 8fzd:M (3.1) BS02 rna N/A GO:0002181 ... P0ADY3 39030416
    808909 8fzd:N (3.1) BS01 rna N/A GO:0002181 ... P02413 39030416
    808910 8fzd:O (3.1) BS01 rna N/A GO:0000027 ... P0ADY7 39030416
    808911 8fzd:P (3.1) BS01 rna N/A GO:0000027 ... P0AG44 39030416
    808912 8fzd:Q (3.1) BS01 rna N/A GO:0002181 ... P0C018 39030416
    808913 8fzd:Q (3.1) BS02 rna N/A GO:0002181 ... P0C018 39030416
    808914 8fzd:R (3.1) BS01 rna N/A GO:0000027 ... P0A7K6 39030416
    808915 8fzd:R (3.1) BS02 rna N/A GO:0000027 ... P0A7K6 39030416
    808916 8fzd:S (3.1) BS01 rna N/A GO:0000027 ... P0A7L3 39030416
    808917 8fzd:T (3.1) BS01 rna N/A GO:0002181 ... P0AG48 39030416
    808918 8fzd:U (3.1) BS01 rna N/A GO:0002181 ... P61175 39030416
    808919 8fzd:V (3.1) BS01 rna N/A GO:0000027 ... P0ADZ0 39030416
    808920 8fzd:W (3.1) BS01 rna N/A GO:0000027 ... P60624 39030416
    808921 8fzd:X (3.1) BS01 rna N/A GO:0000027 ... P68919 39030416
    808922 8fzd:Y (3.1) BS01 rna N/A GO:0000027 ... P0A7L8 39030416
    808923 8fzd:Z (3.1) BS01 rna N/A GO:0000027 ... P0A7M2 39030416
    808924 8fzd:b (3.1) BS01 rna N/A GO:0000028 ... P0A7V0 39030416
    808925 8fzd:c (3.1) BS01 rna N/A GO:0000028 ... P0A7V3 39030416
    808926 8fzd:d (3.1) BS01 rna N/A GO:0000028 ... P0A7V8 39030416
    808927 8fzd:e (3.1) BS01 rna N/A GO:0000028 ... P0A7W1 39030416
    808928 8fzd:f (3.1) BS01 rna N/A GO:0002181 ... P02358 39030416
    808929 8fzd:g (3.1) BS01 rna N/A GO:0003723 ... P02359 39030416
    808930 8fzd:g (3.1) BS02 rna N/A GO:0003723 ... P02359 39030416
    808931 8fzd:g (3.1) BS03 rna N/A GO:0003723 ... P02359 39030416
    808932 8fzd:h (3.1) BS01 rna N/A GO:0000028 ... P0A7W7 39030416
    808933 8fzd:i (3.1) BS01 rna N/A GO:0000049 ... P0A7X3 39030416
    808934 8fzd:i (3.1) BS02 rna N/A GO:0000049 ... P0A7X3 39030416
    808935 8fzd:j (3.1) BS01 rna N/A GO:0000049 ... P0A7R5 39030416
    808936 8fzd:k (3.1) BS01 rna N/A GO:0002181 ... P0A7R9 39030416
    808937 8fzd:l (3.1) BS01 rna N/A GO:0000049 ... P0A7S3 39030416
    808938 8fzd:m (3.1) BS01 rna N/A GO:0000049 ... P0A7S9 39030416
    808939 8fzd:m (3.1) BS02 rna N/A GO:0000049 ... P0A7S9 39030416
    808940 8fzd:n (3.1) BS01 rna N/A GO:0000028 ... P0AG59 39030416
    808941 8fzd:o (3.1) BS01 rna N/A GO:0000028 ... P0ADZ4 39030416
    808942 8fzd:o (3.1) BS02 rna N/A GO:0000028 ... P0ADZ4 39030416
    808943 8fzd:p (3.1) BS01 rna N/A GO:0000028 ... P0A7T3 39030416
    808944 8fzd:q (3.1) BS01 rna N/A GO:0000028 ... P0AG63 39030416
    808945 8fzd:r (3.1) BS01 rna N/A GO:0002181 ... P0A7T7 39030416
    808946 8fzd:s (3.1) BS01 rna N/A GO:0000028 ... P0A7U3 39030416
    808947 8fzd:t (3.1) BS01 rna N/A GO:0000028 ... P0A7U7 39030416
    808948 8fzd:u (3.1) BS01 rna N/A GO:0000028 ... P68679 39030416
    808949 8fzd:v (3.1) BS01 rna N/A GO:0003924 ... P0A7I4 39030416
    808950 8fzd:w (3.1) BS01 rna N/A GO:0003747 ... P0A7I0 39030416
    808951 8fzd:w (3.1) BS02 rna N/A GO:0003747 ... P0A7I0 39030416
    808952 8fzd:w (3.1) BS03 rna N/A GO:0003747 ... P0A7I0 39030416
    808953 8fzd:w (3.1) BS04 rna N/A GO:0003747 ... P0A7I0 39030416
    808954 8fze:1 (3.0) BS01 rna N/A GO:0000027 ... P0A7M6 39030416
    808955 8fze:2 (3.0) BS01 rna N/A GO:0000027 ... P0AG51 39030416
    808956 8fze:3 (3.0) BS01 rna N/A GO:0002181 ... P0A7M9 39030416
    808957 8fze:3 (3.0) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    808958 8fze:4 (3.0) BS01 rna N/A GO:0000027 ... P0A7N4 39030416
    808959 8fze:5 (3.0) BS01 rna N/A GO:0000027 ... P0A7N9 39030416
    808960 8fze:6 (3.0) BS01 rna N/A GO:0002181 ... P0A7P5 39030416
    808961 8fze:7 (3.0) BS01 rna N/A GO:0002181 ... P0A7Q1 39030416
    808962 8fze:8 (3.0) BS01 rna N/A GO:0002181 ... P0A7Q6 39030416
    808963 8fze:8 (3.0) BS02 ZN N/A GO:0002181 ... P0A7Q6 39030416
    808964 8fze:C (3.0) BS01 rna N/A GO:0000027 ... P60422 39030416
    808965 8fze:C (3.0) BS02 MG N/A GO:0000027 ... P60422 39030416
    808966 8fze:D (3.0) BS01 rna N/A GO:0000027 ... P60438 39030416
    808967 8fze:E (3.0) BS01 rna N/A GO:0001070 ... P60723 39030416
    808968 8fze:F (3.0) BS01 rna N/A GO:0000027 ... P62399 39030416
    808969 8fze:F (3.0) BS02 rna N/A GO:0000027 ... P62399 39030416
    808970 8fze:F (3.0) BS03 rna N/A GO:0000027 ... P62399 39030416
    808971 8fze:G (3.0) BS01 rna N/A GO:0000027 ... P0AG55 39030416
    808972 8fze:H (3.0) BS01 rna N/A GO:0002181 ... P0A7R1 39030416
    808973 8fze:I (3.0) BS01 rna N/A GO:0002181 ... P0A7J3 39030416
    808974 8fze:J (3.0) BS01 rna N/A GO:0000027 ... P0A7J7 39030416
    808975 8fze:L (3.0) BS01 rna N/A GO:0002181 ... P0AA10 39030416
    808976 8fze:M (3.0) BS01 rna N/A GO:0002181 ... P0ADY3 39030416
    808977 8fze:N (3.0) BS01 rna N/A GO:0002181 ... P02413 39030416
    808978 8fze:O (3.0) BS01 rna N/A GO:0000027 ... P0ADY7 39030416
    808979 8fze:P (3.0) BS01 rna N/A GO:0000027 ... P0AG44 39030416
    808980 8fze:Q (3.0) BS01 rna N/A GO:0002181 ... P0C018 39030416
    808981 8fze:Q (3.0) BS02 rna N/A GO:0002181 ... P0C018 39030416
    808982 8fze:R (3.0) BS01 rna N/A GO:0000027 ... P0A7K6 39030416
    808983 8fze:R (3.0) BS02 rna N/A GO:0000027 ... P0A7K6 39030416
    808984 8fze:S (3.0) BS01 rna N/A GO:0000027 ... P0A7L3 39030416
    808985 8fze:S (3.0) BS02 MG N/A GO:0000027 ... P0A7L3 39030416
    808986 8fze:T (3.0) BS01 rna N/A GO:0002181 ... P0AG48 39030416
    808987 8fze:U (3.0) BS01 rna N/A GO:0002181 ... P61175 39030416
    808988 8fze:V (3.0) BS01 rna N/A GO:0000027 ... P0ADZ0 39030416
    808989 8fze:W (3.0) BS01 rna N/A GO:0000027 ... P60624 39030416
    808990 8fze:X (3.0) BS01 rna N/A GO:0000027 ... P68919 39030416
    808991 8fze:Y (3.0) BS01 rna N/A GO:0000027 ... P0A7L8 39030416
    808992 8fze:Y (3.0) BS02 rna N/A GO:0000027 ... P0A7L8 39030416
    808993 8fze:Z (3.0) BS01 rna N/A GO:0000027 ... P0A7M2 39030416
    808994 8fze:b (3.0) BS01 rna N/A GO:0000028 ... P0A7V0 39030416
    808995 8fze:c (3.0) BS01 rna N/A GO:0000028 ... P0A7V3 39030416
    808996 8fze:d (3.0) BS01 rna N/A GO:0000028 ... P0A7V8 39030416
    808997 8fze:e (3.0) BS01 rna N/A GO:0000028 ... P0A7W1 39030416
    808998 8fze:f (3.0) BS01 rna N/A GO:0002181 ... P02358 39030416
    808999 8fze:g (3.0) BS01 rna N/A GO:0003723 ... P02359 39030416
    809000 8fze:g (3.0) BS02 rna N/A GO:0003723 ... P02359 39030416

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).