SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    809001 8fkx:LB (2.59) BS02 MG ? GO:0002181 ... Q07020 37410842
    809002 8fkx:LC (2.59) BS01 rna ? GO:0002181 ... Q02543 37410842
    809003 8fkx:LE (2.59) BS01 rna ? GO:0001650 ... P46778 37410842
    809004 8fkx:LG (2.59) BS01 rna ? GO:0000122 ... P62829 37410842
    809005 8fkx:LH (2.59) BS01 rna ? GO:0002181 ... P62750 37410842
    809006 8fkx:LH (2.59) BS02 rna ? GO:0002181 ... P62750 37410842
    809007 8fkx:LI (2.59) BS01 rna ? GO:0002181 ... P61254 37410842
    809008 8fkx:LI (2.59) BS02 rna ? GO:0002181 ... P61254 37410842
    809009 8fkx:LK (2.59) BS01 rna ? GO:0002181 ... P46776 37410842
    809010 8fkx:LL (2.59) BS01 rna ? GO:0002181 ... P46779 37410842
    809011 8fkx:LN (2.59) BS01 rna ? GO:0002181 ... P39023 37410842
    809012 8fkx:LP (2.59) BS01 rna ? GO:0002181 ... P62899 37410842
    809013 8fkx:LQ (2.59) BS01 rna ? GO:0002181 ... P62910 37410842
    809014 8fkx:LQ (2.59) BS02 MG ? GO:0002181 ... P62910 37410842
    809015 8fkx:LS (2.59) BS01 rna ? GO:0000463 ... P42766 37410842
    809016 8fkx:LS (2.59) BS02 rna ? GO:0000463 ... P42766 37410842
    809017 8fkx:LT (2.59) BS01 rna ? GO:0002181 ... P18077 37410842
    809018 8fkx:LT (2.59) BS02 MG ? GO:0002181 ... P18077 37410842
    809019 8fkx:LU (2.59) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    809020 8fkx:LW (2.59) BS01 rna ? GO:0000448 ... P61927 37410842
    809021 8fkx:LW (2.59) BS02 rna ? GO:0000448 ... P61927 37410842
    809022 8fkx:LW (2.59) BS03 ZN ? GO:0000448 ... P61927 37410842
    809023 8fkx:NB (2.59) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    809024 8fkx:NF (2.59) BS01 rna ? GO:0000460 ... O95478 37410842
    809025 8fkx:NH (2.59) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    809026 8fkx:NI (2.59) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    809027 8fkx:NI (2.59) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    809028 8fkx:NK (2.59) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    809029 8fkx:SA (2.59) BS01 rna ? GO:0002181 ... P36578 37410842
    809030 8fkx:SA (2.59) BS02 rna ? GO:0002181 ... P36578 37410842
    809031 8fkx:SA (2.59) BS03 MG ? GO:0002181 ... P36578 37410842
    809032 8fkx:SC (2.59) BS01 rna ? GO:0002181 ... Q02878 37410842
    809033 8fkx:SD (2.59) BS01 rna ? GO:0000463 ... P18124 37410842
    809034 8fkx:SE (2.59) BS01 rna ? GO:0000470 ... P62424 37410842
    809035 8fkx:SE (2.59) BS02 rna ? GO:0000470 ... P62424 37410842
    809036 8fkx:SG (2.59) BS01 rna ? GO:0002181 ... P32969 37410842
    809037 8fkx:SH (2.59) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    809038 8fkx:SI (2.59) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    809039 8fkx:SI (2.59) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    809040 8fkx:SI (2.59) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    809041 8fkx:SJ (2.59) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    809042 8fkx:SK (2.59) BS01 rna ? GO:0000054 ... P56537 37410842
    809043 8fkx:SL (2.59) BS01 rna ? GO:0001649 ... O76021 37410842
    809044 8fkx:SM (2.59) BS01 rna ? GO:0000463 ... O00541 37410842
    809045 8fkx:SM (2.59) BS02 rna ? GO:0000463 ... O00541 37410842
    809046 8fkx:SN (2.59) BS01 rna ? GO:0003723 ... Q99848 37410842
    809047 8fkx:SO (2.59) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    809048 8fkx:SQ (2.59) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    809049 8fkx:SR (2.59) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    809050 8fkx:SR (2.59) BS02 GDP ? GO:0001649 ... Q9BZE4 37410842
    809051 8fkx:SS (2.59) BS01 rna ? GO:0000027 ... Q14137 37410842
    809052 8fkx:ST (2.59) BS01 rna ? GO:0000027 ... Q15050 37410842
    809053 8fkx:SU (2.59) BS01 MG ? GO:0003682 ... Q8WTT2 37410842
    809054 8fkx:SV (2.59) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    809055 8fkx:SV (2.59) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    809056 8fkx:SW (2.59) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    809057 8fkx:SY (2.59) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    809058 8fkx:SZ (2.59) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    809059 8fky:BA (2.67) BS01 rna ? GO:0002181 ... P30050 37410842
    809060 8fky:BB (2.67) BS01 rna ? GO:0002181 ... P62906 37410842
    809061 8fky:BC (2.67) BS01 rna ? GO:0005654 ... Q9H6Y2 37410842
    809062 8fky:L6 (2.67) BS01 rna ? GO:0002181 ... P26373 37410842
    809063 8fky:L6 (2.67) BS02 rna ? GO:0002181 ... P26373 37410842
    809064 8fky:L7 (2.67) BS01 rna ? GO:0002181 ... P40429 37410842
    809065 8fky:L8 (2.67) BS01 rna ? GO:0002181 ... P50914 37410842
    809066 8fky:L9 (2.67) BS01 rna ? GO:0002181 ... P61313 37410842
    809067 8fky:L9 (2.67) BS02 rna ? GO:0002181 ... P61313 37410842
    809068 8fky:L9 (2.67) BS03 MG ? GO:0002181 ... P61313 37410842
    809069 8fky:LA (2.67) BS01 rna ? GO:0002181 ... P18621 37410842
    809070 8fky:LA (2.67) BS02 rna ? GO:0002181 ... P18621 37410842
    809071 8fky:LB (2.67) BS01 rna ? GO:0002181 ... Q07020 37410842
    809072 8fky:LC (2.67) BS01 rna ? GO:0002181 ... Q02543 37410842
    809073 8fky:LD (2.67) BS01 rna ? GO:0002181 ... P84098 37410842
    809074 8fky:LE (2.67) BS01 rna ? GO:0001650 ... P46778 37410842
    809075 8fky:LG (2.67) BS01 rna ? GO:0000122 ... P62829 37410842
    809076 8fky:LH (2.67) BS01 rna ? GO:0002181 ... P62750 37410842
    809077 8fky:LH (2.67) BS02 rna ? GO:0002181 ... P62750 37410842
    809078 8fky:LI (2.67) BS01 rna ? GO:0002181 ... P61254 37410842
    809079 8fky:LI (2.67) BS02 rna ? GO:0002181 ... P61254 37410842
    809080 8fky:LJ (2.67) BS01 rna ? GO:0002181 ... P61353 37410842
    809081 8fky:LK (2.67) BS01 rna ? GO:0002181 ... P46776 37410842
    809082 8fky:LL (2.67) BS01 rna ? GO:0002181 ... P46779 37410842
    809083 8fky:LN (2.67) BS01 rna ? GO:0002181 ... P39023 37410842
    809084 8fky:LO (2.67) BS01 rna ? GO:0002181 ... P62888 37410842
    809085 8fky:LP (2.67) BS01 rna ? GO:0002181 ... P62899 37410842
    809086 8fky:LQ (2.67) BS01 rna ? GO:0002181 ... P62910 37410842
    809087 8fky:LQ (2.67) BS02 MG ? GO:0002181 ... P62910 37410842
    809088 8fky:LR (2.67) BS01 rna ? GO:0002181 ... P49207 37410842
    809089 8fky:LR (2.67) BS02 ZN ? GO:0002181 ... P49207 37410842
    809090 8fky:LS (2.67) BS01 rna ? GO:0000463 ... P42766 37410842
    809091 8fky:LS (2.67) BS02 rna ? GO:0000463 ... P42766 37410842
    809092 8fky:LT (2.67) BS01 rna ? GO:0002181 ... P18077 37410842
    809093 8fky:LT (2.67) BS02 MG ? GO:0002181 ... P18077 37410842
    809094 8fky:LU (2.67) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    809095 8fky:LW (2.67) BS01 rna ? GO:0000448 ... P61927 37410842
    809096 8fky:LW (2.67) BS02 rna ? GO:0000448 ... P61927 37410842
    809097 8fky:LW (2.67) BS03 ZN ? GO:0000448 ... P61927 37410842
    809098 8fky:NB (2.67) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    809099 8fky:NF (2.67) BS01 rna ? GO:0000460 ... O95478 37410842
    809100 8fky:NH (2.67) BS01 rna ? GO:0003723 ... Q9Y221 37410842
    809101 8fky:NI (2.67) BS01 rna 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    809102 8fky:NI (2.67) BS02 ADP 3.6.4.13 GO:0003676 ... Q8TDD1 37410842
    809103 8fky:NK (2.67) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    809104 8fky:SA (2.67) BS01 rna ? GO:0002181 ... P36578 37410842
    809105 8fky:SA (2.67) BS02 rna ? GO:0002181 ... P36578 37410842
    809106 8fky:SC (2.67) BS01 rna ? GO:0002181 ... Q02878 37410842
    809107 8fky:SD (2.67) BS01 rna ? GO:0000463 ... P18124 37410842
    809108 8fky:SE (2.67) BS01 rna ? GO:0000470 ... P62424 37410842
    809109 8fky:SE (2.67) BS02 rna ? GO:0000470 ... P62424 37410842
    809110 8fky:SG (2.67) BS01 rna ? GO:0002181 ... P32969 37410842
    809111 8fky:SH (2.67) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    809112 8fky:SI (2.67) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    809113 8fky:SI (2.67) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    809114 8fky:SI (2.67) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    809115 8fky:SJ (2.67) BS01 rna 2.1.1.- GO:0000463 ... Q8IY81 37410842
    809116 8fky:SK (2.67) BS01 rna ? GO:0000054 ... P56537 37410842
    809117 8fky:SL (2.67) BS01 rna ? GO:0001649 ... O76021 37410842
    809118 8fky:SM (2.67) BS01 rna ? GO:0000463 ... O00541 37410842
    809119 8fky:SM (2.67) BS02 rna ? GO:0000463 ... O00541 37410842
    809120 8fky:SN (2.67) BS01 rna ? GO:0003723 ... Q99848 37410842
    809121 8fky:SO (2.67) BS01 rna ? GO:0000027 ... Q8TDN6 37410842
    809122 8fky:SQ (2.67) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    809123 8fky:SR (2.67) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    809124 8fky:SR (2.67) BS02 GDP ? GO:0001649 ... Q9BZE4 37410842
    809125 8fky:SS (2.67) BS01 rna ? GO:0000027 ... Q14137 37410842
    809126 8fky:ST (2.67) BS01 rna ? GO:0000027 ... Q15050 37410842
    809127 8fky:SU (2.67) BS01 MG ? GO:0003682 ... Q8WTT2 37410842
    809128 8fky:SV (2.67) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    809129 8fky:SV (2.67) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    809130 8fky:SW (2.67) BS01 rna 3.6.4.13 GO:0000463 ... Q9NVP1 37410842
    809131 8fky:SY (2.67) BS01 rna 2.1.1.- GO:0000027 ... P46087 37410842
    809132 8fky:SZ (2.67) BS01 rna ? GO:0003723 ... Q9Y3C1 37410842
    809133 8fkz:BA (3.04) BS01 rna ? GO:0002181 ... P30050 37410842
    809134 8fkz:L6 (3.04) BS01 rna ? GO:0002181 ... P26373 37410842
    809135 8fkz:L6 (3.04) BS02 rna ? GO:0002181 ... P26373 37410842
    809136 8fkz:L7 (3.04) BS01 rna ? GO:0002181 ... P40429 37410842
    809137 8fkz:L8 (3.04) BS01 rna ? GO:0002181 ... P50914 37410842
    809138 8fkz:L9 (3.04) BS01 rna ? GO:0002181 ... P61313 37410842
    809139 8fkz:L9 (3.04) BS02 rna ? GO:0002181 ... P61313 37410842
    809140 8fkz:L9 (3.04) BS03 MG ? GO:0002181 ... P61313 37410842
    809141 8fkz:LA (3.04) BS01 rna ? GO:0002181 ... P18621 37410842
    809142 8fkz:LA (3.04) BS02 rna ? GO:0002181 ... P18621 37410842
    809143 8fkz:LB (3.04) BS01 rna ? GO:0002181 ... Q07020 37410842
    809144 8fkz:LC (3.04) BS01 rna ? GO:0002181 ... Q02543 37410842
    809145 8fkz:LD (3.04) BS01 rna ? GO:0002181 ... P84098 37410842
    809146 8fkz:LE (3.04) BS01 rna ? GO:0001650 ... P46778 37410842
    809147 8fkz:LF (3.04) BS01 rna ? GO:0002181 ... P35268 37410842
    809148 8fkz:LG (3.04) BS01 rna ? GO:0000122 ... P62829 37410842
    809149 8fkz:LH (3.04) BS01 rna ? GO:0002181 ... P62750 37410842
    809150 8fkz:LH (3.04) BS02 rna ? GO:0002181 ... P62750 37410842
    809151 8fkz:LI (3.04) BS01 rna ? GO:0002181 ... P61254 37410842
    809152 8fkz:LI (3.04) BS02 rna ? GO:0002181 ... P61254 37410842
    809153 8fkz:LJ (3.04) BS01 rna ? GO:0002181 ... P61353 37410842
    809154 8fkz:LK (3.04) BS01 rna ? GO:0002181 ... P46776 37410842
    809155 8fkz:LL (3.04) BS01 rna ? GO:0002181 ... P46779 37410842
    809156 8fkz:LN (3.04) BS01 rna ? GO:0002181 ... P39023 37410842
    809157 8fkz:LO (3.04) BS01 rna ? GO:0002181 ... P62888 37410842
    809158 8fkz:LP (3.04) BS01 rna ? GO:0002181 ... P62899 37410842
    809159 8fkz:LQ (3.04) BS01 rna ? GO:0002181 ... P62910 37410842
    809160 8fkz:LR (3.04) BS01 rna ? GO:0002181 ... P49207 37410842
    809161 8fkz:LR (3.04) BS02 ZN ? GO:0002181 ... P49207 37410842
    809162 8fkz:LS (3.04) BS01 rna ? GO:0000463 ... P42766 37410842
    809163 8fkz:LS (3.04) BS02 rna ? GO:0000463 ... P42766 37410842
    809164 8fkz:LT (3.04) BS01 rna ? GO:0002181 ... P18077 37410842
    809165 8fkz:LT (3.04) BS02 MG ? GO:0002181 ... P18077 37410842
    809166 8fkz:LU (3.04) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    809167 8fkz:LW (3.04) BS01 rna ? GO:0000448 ... P61927 37410842
    809168 8fkz:LW (3.04) BS02 rna ? GO:0000448 ... P61927 37410842
    809169 8fkz:LW (3.04) BS03 ZN ? GO:0000448 ... P61927 37410842
    809170 8fkz:LX (3.04) BS01 rna ? GO:0002181 ... P61513 37410842
    809171 8fkz:LX (3.04) BS02 ZN ? GO:0002181 ... P61513 37410842
    809172 8fkz:LY (3.04) BS01 rna ? GO:0002181 ... P63173 37410842
    809173 8fkz:LZ (3.04) BS01 rna ? GO:0002181 ... P62891 37410842
    809174 8fkz:LZ (3.04) BS02 rna ? GO:0002181 ... P62891 37410842
    809175 8fkz:NB (3.04) BS01 rna ? GO:0003723 ... Q9BVP2 37410842
    809176 8fkz:NC (3.04) BS01 rna ? GO:0003723 ... Q13823 37410842
    809177 8fkz:NF (3.04) BS01 rna ? GO:0000460 ... O95478 37410842
    809178 8fkz:NK (3.04) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    809179 8fkz:NL (3.04) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    809180 8fkz:SA (3.04) BS01 rna ? GO:0002181 ... P36578 37410842
    809181 8fkz:SA (3.04) BS02 rna ? GO:0002181 ... P36578 37410842
    809182 8fkz:SA (3.04) BS03 MG ? GO:0002181 ... P36578 37410842
    809183 8fkz:SC (3.04) BS01 rna ? GO:0002181 ... Q02878 37410842
    809184 8fkz:SD (3.04) BS01 rna ? GO:0000463 ... P18124 37410842
    809185 8fkz:SE (3.04) BS01 rna ? GO:0000470 ... P62424 37410842
    809186 8fkz:SE (3.04) BS02 rna ? GO:0000470 ... P62424 37410842
    809187 8fkz:SF (3.04) BS01 rna ? GO:0002181 ... P62917 37410842
    809188 8fkz:SG (3.04) BS01 rna ? GO:0002181 ... P32969 37410842
    809189 8fkz:SH (3.04) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    809190 8fkz:SI (3.04) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    809191 8fkz:SI (3.04) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    809192 8fkz:SL (3.04) BS01 rna ? GO:0001649 ... O76021 37410842
    809193 8fkz:SM (3.04) BS01 rna ? GO:0000463 ... O00541 37410842
    809194 8fkz:SM (3.04) BS02 rna ? GO:0000463 ... O00541 37410842
    809195 8fkz:SQ (3.04) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    809196 8fkz:SR (3.04) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    809197 8fkz:SR (3.04) BS02 rna ? GO:0001649 ... Q9BZE4 37410842
    809198 8fkz:SR (3.04) BS03 GDP ? GO:0001649 ... Q9BZE4 37410842
    809199 8fkz:SR (3.04) BS04 MG ? GO:0001649 ... Q9BZE4 37410842
    809200 8fkz:SV (3.04) BS01 rna ? GO:0003735 ... Q9UHA3 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).