SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    809401 8g0b:5 (2.8) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809402 8g0b:5 (2.8) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809403 8g0b:6 (2.8) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809404 8g0b:6 (2.8) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809405 8g0b:7 (2.8) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809406 8g0b:7 (2.8) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809407 8g0b:8 (2.8) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809408 8g0b:8 (2.8) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809409 8g0b:9 (2.8) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809410 8g0b:9 (2.8) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809411 8g0b:a (2.8) BS01 YGR ? GO:0005886 ... A0R206 37377118
    809412 8g0b:a (2.8) BS02 YGR ? GO:0005886 ... A0R206 37377118
    809413 8g0c:A (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809414 8g0c:B (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809415 8g0c:C (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809416 8g0c:F (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0R200 37377118
    809417 8g0d:A (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809418 8g0d:B (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809419 8g0d:C (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809420 8g0d:D (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0R200 37377118
    809421 8g0d:E (2.9) BS01 PO4 7.1.2.2 GO:0005524 ... A0R200 37377118
    809422 8g0e:1 (2.6) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809423 8g0e:3 (2.6) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809424 8g0e:4 (2.6) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809425 8g0e:4 (2.6) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809426 8g0e:5 (2.6) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809427 8g0e:5 (2.6) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809428 8g0e:6 (2.6) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809429 8g0e:6 (2.6) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809430 8g0e:7 (2.6) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809431 8g0e:7 (2.6) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809432 8g0e:8 (2.6) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809433 8g0e:8 (2.6) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809434 8g0e:9 (2.6) BS01 YGR ? GO:0005886 ... A0R205 37377118
    809435 8g0e:9 (2.6) BS02 YGR ? GO:0005886 ... A0R205 37377118
    809436 8g0e:A (2.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809437 8g0e:B (2.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809438 8g0e:B (2.6) BS02 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809439 8g0e:C (2.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0R202 37377118
    809440 8g0e:E (2.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0R200 37377118
    809441 8g0e:E (2.6) BS02 MG 7.1.2.2 GO:0005524 ... A0R200 37377118
    809442 8g0e:F (2.6) BS01 PO4 7.1.2.2 GO:0005524 ... A0R200 37377118
    809443 8g0e:a (2.6) BS01 YGR ? GO:0005886 ... A0R206 37377118
    809444 8g0e:a (2.6) BS02 YGR ? GO:0005886 ... A0R206 37377118
    809445 8g0g:A (2.1) BS01 APU ? GO:0005615 ... Q5PY51 37505680
    809446 8g0g:B (2.1) BS01 APU ? GO:0005615 ... Q5PY51 37505680
    809447 8g0h:A (3.8) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    809448 8g0h:A (3.8) BS02 dna 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    809449 8g0h:A (3.8) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    809450 8g0h:A (3.8) BS04 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    809451 8g0h:B (3.8) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    809452 8g0h:B (3.8) BS02 YH0 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    809453 8g0h:C (3.8) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    809454 8g0h:C (3.8) BS02 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    809455 8g0h:C (3.8) BS03 ZN 2.4.2.-
    2.4.2.30
    GO:0003677 ... P09874 38372302
    809456 8g0h:D (3.8) BS01 dna 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    809457 8g0h:D (3.8) BS02 YH0 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    809458 8g0l:A (3.39) BS01 peptide 2.3.1.254 GO:0004596 ... P61599 37319422
    809459 8g0l:A (3.39) BS02 CMC 2.3.1.254 GO:0004596 ... P61599 37319422
    809460 8g0m:B (2.25) BS01 BMA N/A N/A N/A 37598178
    809461 8g0m:B (2.25) BS02 GAL N/A N/A N/A 37598178
    809462 8g0r:A (2.6) BS01 YHF 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809463 8g0r:B (2.6) BS01 YHF 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809464 8g0r:C (2.6) BS01 YHF 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809465 8g0s:A (2.9) BS01 YHF 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809466 8g0s:B (2.9) BS01 YHF 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809467 8g0s:C (2.9) BS01 YHF 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809468 8g0t:A (2.45) BS01 YHK 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809469 8g0t:B (2.45) BS01 YHK 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809470 8g0t:C (2.45) BS01 YHK 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809471 8g0u:A (1.9) BS01 YHQ 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809472 8g0u:B (1.9) BS01 YHQ 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809473 8g0u:C (1.9) BS01 YHQ 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809474 8g0v:A (1.9) BS01 YHT 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809475 8g0v:B (1.9) BS01 YHT 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809476 8g0v:C (1.9) BS01 YHT 6.2.1.1 GO:0003987 ... J9VFT1 N/A
    809477 8g0z:A (3.61) BS01 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809478 8g0z:B (3.61) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    809479 8g0z:B (3.61) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809480 8g0z:B (3.61) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809481 8g0z:C (3.61) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    809482 8g0z:C (3.61) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809483 8g0z:C (3.61) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809484 8g0z:D (3.61) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    809485 8g0z:D (3.61) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809486 8g0z:D (3.61) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809487 8g0z:E (3.61) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    809488 8g0z:E (3.61) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809489 8g0z:E (3.61) BS03 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809490 8g0z:F (3.61) BS01 dna 3.6.4.- GO:0003677 ... P04530 37474605
    809491 8g0z:F (3.61) BS02 AGS 3.6.4.- GO:0003677 ... P04530 37474605
    809492 8g10:A (2.47) BS01 dna 2.7.7.86 N/A Q8C6L5 38740774
    809493 8g10:A (2.47) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    809494 8g10:A (2.47) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    809495 8g10:A (2.47) BS04 dna 2.7.7.86 N/A Q8C6L5 38740774
    809496 8g10:A (2.47) BS05 GTP 2.7.7.86 N/A Q8C6L5 38740774
    809497 8g10:A (2.47) BS06 GTP 2.7.7.86 N/A Q8C6L5 38740774
    809498 8g10:A (2.47) BS07 MG 2.7.7.86 N/A Q8C6L5 38740774
    809499 8g10:A (2.47) BS08 ZN 2.7.7.86 N/A Q8C6L5 38740774
    809500 8g10:C (2.47) BS01 dna 2.7.7.86 N/A Q8C6L5 38740774
    809501 8g10:C (2.47) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    809502 8g10:C (2.47) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    809503 8g10:C (2.47) BS04 dna 2.7.7.86 N/A Q8C6L5 38740774
    809504 8g10:C (2.47) BS05 GTP 2.7.7.86 N/A Q8C6L5 38740774
    809505 8g10:C (2.47) BS06 GTP 2.7.7.86 N/A Q8C6L5 38740774
    809506 8g10:C (2.47) BS07 MG 2.7.7.86 N/A Q8C6L5 38740774
    809507 8g10:C (2.47) BS08 ZN 2.7.7.86 N/A Q8C6L5 38740774
    809508 8g18:A (2.85) BS01 YGW ? GO:0004930 ... A0A8J0TPH2 36779874
    809509 8g18:B (2.85) BS01 YGW ? N/A Q00960 36779874
    809510 8g18:C (2.85) BS01 YGW ? GO:0004930 ... A0A8J0TPH2 36779874
    809511 8g18:D (2.85) BS01 YGW ? N/A Q00960 36779874
    809512 8g1a:A (2.8) BS01 P0T ? GO:0001518 ... Q15858 37330538
    809513 8g1a:A (2.8) BS02 P0T ? GO:0001518 ... Q15858 37330538
    809514 8g1a:A (2.8) BS03 P5S ? GO:0001518 ... Q15858 37330538
    809515 8g1a:A (2.8) BS04 Y01 ? GO:0001518 ... Q15858 37330538
    809516 8g1a:A (2.8) BS05 Y01 ? GO:0001518 ... Q15858 37330538
    809517 8g1a:A (2.8) BS06 9Z9 ? GO:0001518 ... Q15858 37330538
    809518 8g1a:A (2.8) BS07 Y01 ? GO:0001518 ... Q15858 37330538
    809519 8g1a:A (2.8) BS08 LPE ? GO:0001518 ... Q15858 37330538
    809520 8g1a:A (2.8) BS09 LPE ? GO:0001518 ... Q15858 37330538
    809521 8g1a:A (2.8) BS10 LPE ? GO:0001518 ... Q15858 37330538
    809522 8g1a:A (2.8) BS11 P5S ? GO:0001518 ... Q15858 37330538
    809523 8g1a:A (2.8) BS12 LPE ? GO:0001518 ... Q15858 37330538
    809524 8g1a:A (2.8) BS13 LPE ? GO:0001518 ... Q15858 37330538
    809525 8g1a:A (2.8) BS14 LPE ? GO:0001518 ... Q15858 37330538
    809526 8g1a:A (2.8) BS15 LPE ? GO:0001518 ... Q15858 37330538
    809527 8g1a:A (2.8) BS16 LPE ? GO:0001518 ... Q15858 37330538
    809528 8g1a:B (2.8) BS01 LPE ? GO:0001518 ... Q07699 37330538
    809529 8g1e:A (2.8) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809530 8g1e:A (2.8) BS02 OAA 2.3.3.8 GO:0003824 ... P53396 37076498
    809531 8g1e:A (2.8) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809532 8g1e:A (2.8) BS04 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809533 8g1e:B (2.8) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809534 8g1e:B (2.8) BS02 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809535 8g1e:B (2.8) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809536 8g1e:B (2.8) BS04 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809537 8g1e:C (2.8) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809538 8g1e:C (2.8) BS02 OAA 2.3.3.8 GO:0003824 ... P53396 37076498
    809539 8g1e:C (2.8) BS03 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    809540 8g1e:C (2.8) BS04 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809541 8g1e:C (2.8) BS05 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809542 8g1e:D (2.8) BS01 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809543 8g1e:D (2.8) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809544 8g1e:D (2.8) BS03 OAA 2.3.3.8 GO:0003824 ... P53396 37076498
    809545 8g1e:D (2.8) BS04 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809546 8g1e:D (2.8) BS05 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    809547 8g1f:A (2.4) BS01 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    809548 8g1f:A (2.4) BS02 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809549 8g1f:A (2.4) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809550 8g1f:A (2.4) BS04 OAA 2.3.3.8 GO:0003824 ... P53396 37076498
    809551 8g1f:A (2.4) BS05 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809552 8g1f:A (2.4) BS06 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809553 8g1f:B (2.4) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809554 8g1f:B (2.4) BS02 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809555 8g1f:B (2.4) BS03 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    809556 8g1f:B (2.4) BS04 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809557 8g1f:B (2.4) BS05 OAA 2.3.3.8 GO:0003824 ... P53396 37076498
    809558 8g1f:B (2.4) BS06 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809559 8g1f:C (2.4) BS01 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809560 8g1f:C (2.4) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809561 8g1f:C (2.4) BS03 OAA 2.3.3.8 GO:0003824 ... P53396 37076498
    809562 8g1f:C (2.4) BS04 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    809563 8g1f:C (2.4) BS05 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809564 8g1f:C (2.4) BS06 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809565 8g1f:D (2.4) BS01 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809566 8g1f:D (2.4) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809567 8g1f:D (2.4) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    809568 8g1f:D (2.4) BS04 OAA 2.3.3.8 GO:0003824 ... P53396 37076498
    809569 8g1f:D (2.4) BS05 Q5B 2.3.3.8 GO:0003824 ... P53396 37076498
    809570 8g1f:D (2.4) BS06 ADP 2.3.3.8 GO:0003824 ... P53396 37076498
    809571 8g1i:A (3.12) BS01 rna 3.1.-.- GO:0003676 ... Q99ZW2 N/A
    809572 8g1i:A (3.12) BS02 dna 3.1.-.- GO:0003676 ... Q99ZW2 N/A
    809573 8g1j:A (2.3) BS01 dna 2.7.7.86 N/A Q8C6L5 38740774
    809574 8g1j:A (2.3) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    809575 8g1j:A (2.3) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    809576 8g1j:A (2.3) BS04 dna 2.7.7.86 N/A Q8C6L5 38740774
    809577 8g1j:A (2.3) BS05 ATP 2.7.7.86 N/A Q8C6L5 38740774
    809578 8g1j:A (2.3) BS06 GTP 2.7.7.86 N/A Q8C6L5 38740774
    809579 8g1j:A (2.3) BS07 MG 2.7.7.86 N/A Q8C6L5 38740774
    809580 8g1j:A (2.3) BS08 ZN 2.7.7.86 N/A Q8C6L5 38740774
    809581 8g1j:C (2.3) BS01 dna 2.7.7.86 N/A Q8C6L5 38740774
    809582 8g1j:C (2.3) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    809583 8g1j:C (2.3) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    809584 8g1j:C (2.3) BS04 ATP 2.7.7.86 N/A Q8C6L5 38740774
    809585 8g1j:C (2.3) BS05 GTP 2.7.7.86 N/A Q8C6L5 38740774
    809586 8g1j:C (2.3) BS06 MG 2.7.7.86 N/A Q8C6L5 38740774
    809587 8g1j:C (2.3) BS07 ZN 2.7.7.86 N/A Q8C6L5 38740774
    809588 8g1l:A (1.06) BS01 CA ? N/A Q5HKE8 N/A
    809589 8g1l:A (1.06) BS02 MG ? N/A Q5HKE8 N/A
    809590 8g1l:A (1.06) BS03 MG ? N/A Q5HKE8 N/A
    809591 8g1l:A (1.06) BS04 MG ? N/A Q5HKE8 N/A
    809592 8g1m:A (1.93) BS01 CA ? N/A Q2G2B2 N/A
    809593 8g1n:A (2.74) BS01 MG 2.7.8.36 GO:0016020 ... A7ZET4 37096962
    809594 8g1n:B (2.74) BS01 MG 2.7.8.36 GO:0016020 ... A7ZET4 37096962
    809595 8g1p:C (2.7) BS01 FWZ ? N/A P40337 37443112
    809596 8g1p:F (2.7) BS01 FWZ ? N/A P40337 37443112
    809597 8g1p:G (2.7) BS01 FWZ 3.6.4.- GO:0006338 ... P51531 37443112
    809598 8g1p:H (2.7) BS01 FWZ 3.6.4.- GO:0006338 ... P51531 37443112
    809599 8g1q:C (3.73) BS01 YHB ? N/A P40337 37443112
    809600 8g1q:H (3.73) BS01 YHB 3.6.4.- GO:0006338 ... P51532 37443112

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).