SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    810001 8fld:LE (2.58) BS01 rna ? GO:0001650 ... P46778 37410842
    810002 8fld:LE (2.58) BS02 rna ? GO:0001650 ... P46778 37410842
    810003 8fld:LF (2.58) BS01 rna ? GO:0002181 ... P35268 37410842
    810004 8fld:LG (2.58) BS01 rna ? GO:0000122 ... P62829 37410842
    810005 8fld:LH (2.58) BS01 rna ? GO:0002181 ... P62750 37410842
    810006 8fld:LH (2.58) BS02 rna ? GO:0002181 ... P62750 37410842
    810007 8fld:LI (2.58) BS01 rna ? GO:0002181 ... P61254 37410842
    810008 8fld:LI (2.58) BS02 rna ? GO:0002181 ... P61254 37410842
    810009 8fld:LJ (2.58) BS01 rna ? GO:0002181 ... P61353 37410842
    810010 8fld:LK (2.58) BS01 rna ? GO:0002181 ... P46776 37410842
    810011 8fld:LL (2.58) BS01 rna ? GO:0002181 ... P46779 37410842
    810012 8fld:LM (2.58) BS01 rna ? GO:0002181 ... P47914 37410842
    810013 8fld:LN (2.58) BS01 rna ? GO:0002181 ... P39023 37410842
    810014 8fld:LO (2.58) BS01 rna ? GO:0002181 ... P62888 37410842
    810015 8fld:LP (2.58) BS01 rna ? GO:0002181 ... P62899 37410842
    810016 8fld:LQ (2.58) BS01 rna ? GO:0002181 ... P62910 37410842
    810017 8fld:LQ (2.58) BS02 MG ? GO:0002181 ... P62910 37410842
    810018 8fld:LR (2.58) BS01 rna ? GO:0002181 ... P49207 37410842
    810019 8fld:LR (2.58) BS02 ZN ? GO:0002181 ... P49207 37410842
    810020 8fld:LS (2.58) BS01 rna ? GO:0000463 ... P42766 37410842
    810021 8fld:LS (2.58) BS02 rna ? GO:0000463 ... P42766 37410842
    810022 8fld:LT (2.58) BS01 rna ? GO:0002181 ... P18077 37410842
    810023 8fld:LT (2.58) BS02 MG ? GO:0002181 ... P18077 37410842
    810024 8fld:LU (2.58) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    810025 8fld:LV (2.58) BS01 rna ? GO:0002181 ... P83881 37410842
    810026 8fld:LV (2.58) BS02 ZN ? GO:0002181 ... P83881 37410842
    810027 8fld:LW (2.58) BS01 rna ? GO:0000448 ... P61927 37410842
    810028 8fld:LW (2.58) BS02 rna ? GO:0000448 ... P61927 37410842
    810029 8fld:LW (2.58) BS03 ZN ? GO:0000448 ... P61927 37410842
    810030 8fld:LX (2.58) BS01 rna ? GO:0002181 ... P61513 37410842
    810031 8fld:LX (2.58) BS02 ZN ? GO:0002181 ... P61513 37410842
    810032 8fld:LY (2.58) BS01 rna ? GO:0002181 ... P63173 37410842
    810033 8fld:LZ (2.58) BS01 rna ? GO:0002181 ... P62891 37410842
    810034 8fld:LZ (2.58) BS02 rna ? GO:0002181 ... P62891 37410842
    810035 8fld:NK (2.58) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    810036 8fld:NL (2.58) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    810037 8fld:NP (2.58) BS01 rna ? GO:0003676 ... O00488 37410842
    810038 8fld:NP (2.58) BS02 ZN ? GO:0003676 ... O00488 37410842
    810039 8fld:SA (2.58) BS01 rna ? GO:0002181 ... P36578 37410842
    810040 8fld:SA (2.58) BS02 rna ? GO:0002181 ... P36578 37410842
    810041 8fld:SB (2.58) BS01 rna ? GO:0000027 ... P46777 37410842
    810042 8fld:SB (2.58) BS02 rna ? GO:0000027 ... P46777 37410842
    810043 8fld:SC (2.58) BS01 rna ? GO:0002181 ... Q02878 37410842
    810044 8fld:SD (2.58) BS01 rna ? GO:0000463 ... P18124 37410842
    810045 8fld:SD (2.58) BS02 rna ? GO:0000463 ... P18124 37410842
    810046 8fld:SE (2.58) BS01 rna ? GO:0000470 ... P62424 37410842
    810047 8fld:SE (2.58) BS02 rna ? GO:0000470 ... P62424 37410842
    810048 8fld:SF (2.58) BS01 rna ? GO:0002181 ... P62917 37410842
    810049 8fld:SF (2.58) BS02 MG ? GO:0002181 ... P62917 37410842
    810050 8fld:SG (2.58) BS01 rna ? GO:0002181 ... P32969 37410842
    810051 8fld:SH (2.58) BS01 rna ? GO:0000794 ... Q9BYG3 37410842
    810052 8fld:SI (2.58) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    810053 8fld:SI (2.58) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    810054 8fld:SI (2.58) BS03 rna ? GO:0000463 ... Q6DKI1 37410842
    810055 8fld:SK (2.58) BS01 rna ? GO:0000054 ... P56537 37410842
    810056 8fld:SL (2.58) BS01 rna ? GO:0001649 ... O76021 37410842
    810057 8fld:SM (2.58) BS01 rna ? GO:0000463 ... O00541 37410842
    810058 8fld:SM (2.58) BS02 rna ? GO:0000463 ... O00541 37410842
    810059 8fld:SQ (2.58) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    810060 8fld:SR (2.58) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    810061 8fld:SR (2.58) BS02 rna ? GO:0001649 ... Q9BZE4 37410842
    810062 8fld:SV (2.58) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    810063 8fld:SV (2.58) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    810064 8fle:BE (2.48) BS01 rna ? GO:0000122 ... P27635 37410842
    810065 8fle:BE (2.48) BS02 rna ? GO:0000122 ... P27635 37410842
    810066 8fle:L5 (2.48) BS01 rna ? GO:0000027 ... P62913 37410842
    810067 8fle:L5 (2.48) BS02 rna ? GO:0000027 ... P62913 37410842
    810068 8fle:L6 (2.48) BS01 rna ? GO:0002181 ... P26373 37410842
    810069 8fle:L6 (2.48) BS02 rna ? GO:0002181 ... P26373 37410842
    810070 8fle:L7 (2.48) BS01 rna ? GO:0002181 ... P40429 37410842
    810071 8fle:L8 (2.48) BS01 rna ? GO:0002181 ... P50914 37410842
    810072 8fle:L9 (2.48) BS01 rna ? GO:0002181 ... P61313 37410842
    810073 8fle:L9 (2.48) BS02 rna ? GO:0002181 ... P61313 37410842
    810074 8fle:LA (2.48) BS01 rna ? GO:0002181 ... P18621 37410842
    810075 8fle:LA (2.48) BS02 rna ? GO:0002181 ... P18621 37410842
    810076 8fle:LB (2.48) BS01 rna ? GO:0002181 ... Q07020 37410842
    810077 8fle:LC (2.48) BS01 rna ? GO:0002181 ... Q02543 37410842
    810078 8fle:LC (2.48) BS02 rna ? GO:0002181 ... Q02543 37410842
    810079 8fle:LD (2.48) BS01 rna ? GO:0002181 ... P84098 37410842
    810080 8fle:LE (2.48) BS01 rna ? GO:0001650 ... P46778 37410842
    810081 8fle:LE (2.48) BS02 rna ? GO:0001650 ... P46778 37410842
    810082 8fle:LF (2.48) BS01 rna ? GO:0002181 ... P35268 37410842
    810083 8fle:LG (2.48) BS01 rna ? GO:0000122 ... P62829 37410842
    810084 8fle:LH (2.48) BS01 rna ? GO:0002181 ... P62750 37410842
    810085 8fle:LH (2.48) BS02 rna ? GO:0002181 ... P62750 37410842
    810086 8fle:LI (2.48) BS01 rna ? GO:0002181 ... P61254 37410842
    810087 8fle:LI (2.48) BS02 rna ? GO:0002181 ... P61254 37410842
    810088 8fle:LJ (2.48) BS01 rna ? GO:0002181 ... P61353 37410842
    810089 8fle:LK (2.48) BS01 rna ? GO:0002181 ... P46776 37410842
    810090 8fle:LL (2.48) BS01 rna ? GO:0002181 ... P46779 37410842
    810091 8fle:LM (2.48) BS01 rna ? GO:0002181 ... P47914 37410842
    810092 8fle:LN (2.48) BS01 rna ? GO:0002181 ... P39023 37410842
    810093 8fle:LO (2.48) BS01 rna ? GO:0002181 ... P62888 37410842
    810094 8fle:LP (2.48) BS01 rna ? GO:0002181 ... P62899 37410842
    810095 8fle:LQ (2.48) BS01 rna ? GO:0002181 ... P62910 37410842
    810096 8fle:LQ (2.48) BS02 MG ? GO:0002181 ... P62910 37410842
    810097 8fle:LR (2.48) BS01 rna ? GO:0002181 ... P49207 37410842
    810098 8fle:LR (2.48) BS02 MG ? GO:0002181 ... P49207 37410842
    810099 8fle:LR (2.48) BS03 ZN ? GO:0002181 ... P49207 37410842
    810100 8fle:LS (2.48) BS01 rna ? GO:0000463 ... P42766 37410842
    810101 8fle:LS (2.48) BS02 rna ? GO:0000463 ... P42766 37410842
    810102 8fle:LT (2.48) BS01 rna ? GO:0002181 ... P18077 37410842
    810103 8fle:LT (2.48) BS02 MG ? GO:0002181 ... P18077 37410842
    810104 8fle:LU (2.48) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    810105 8fle:LV (2.48) BS01 rna ? GO:0002181 ... P83881 37410842
    810106 8fle:LV (2.48) BS02 ZN ? GO:0002181 ... P83881 37410842
    810107 8fle:LW (2.48) BS01 rna ? GO:0000448 ... P61927 37410842
    810108 8fle:LW (2.48) BS02 rna ? GO:0000448 ... P61927 37410842
    810109 8fle:LW (2.48) BS03 ZN ? GO:0000448 ... P61927 37410842
    810110 8fle:LX (2.48) BS01 rna ? GO:0002181 ... P61513 37410842
    810111 8fle:LX (2.48) BS02 ZN ? GO:0002181 ... P61513 37410842
    810112 8fle:LY (2.48) BS01 rna ? GO:0002181 ... P63173 37410842
    810113 8fle:LZ (2.48) BS01 rna ? GO:0002181 ... P62891 37410842
    810114 8fle:LZ (2.48) BS02 rna ? GO:0002181 ... P62891 37410842
    810115 8fle:NK (2.48) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    810116 8fle:NL (2.48) BS01 rna ? GO:0000027 ... Q9NZM5 37410842
    810117 8fle:NP (2.48) BS01 rna ? GO:0003676 ... O00488 37410842
    810118 8fle:NP (2.48) BS02 ZN ? GO:0003676 ... O00488 37410842
    810119 8fle:SA (2.48) BS01 rna ? GO:0002181 ... P36578 37410842
    810120 8fle:SA (2.48) BS02 rna ? GO:0002181 ... P36578 37410842
    810121 8fle:SB (2.48) BS01 rna ? GO:0000027 ... P46777 37410842
    810122 8fle:SB (2.48) BS02 rna ? GO:0000027 ... P46777 37410842
    810123 8fle:SC (2.48) BS01 rna ? GO:0002181 ... Q02878 37410842
    810124 8fle:SD (2.48) BS01 rna ? GO:0000463 ... P18124 37410842
    810125 8fle:SD (2.48) BS02 rna ? GO:0000463 ... P18124 37410842
    810126 8fle:SE (2.48) BS01 rna ? GO:0000470 ... P62424 37410842
    810127 8fle:SE (2.48) BS02 rna ? GO:0000470 ... P62424 37410842
    810128 8fle:SF (2.48) BS01 rna ? GO:0002181 ... P62917 37410842
    810129 8fle:SF (2.48) BS02 MG ? GO:0002181 ... P62917 37410842
    810130 8fle:SG (2.48) BS01 rna ? GO:0002181 ... P32969 37410842
    810131 8fle:SI (2.48) BS01 rna ? GO:0000463 ... Q6DKI1 37410842
    810132 8fle:SI (2.48) BS02 rna ? GO:0000463 ... Q6DKI1 37410842
    810133 8fle:SK (2.48) BS01 rna ? GO:0000054 ... P56537 37410842
    810134 8fle:SM (2.48) BS01 rna ? GO:0000463 ... O00541 37410842
    810135 8fle:SM (2.48) BS02 rna ? GO:0000463 ... O00541 37410842
    810136 8fle:SQ (2.48) BS01 rna ? GO:0000027 ... Q9UKD2 37410842
    810137 8fle:SR (2.48) BS01 rna ? GO:0001649 ... Q9BZE4 37410842
    810138 8fle:SR (2.48) BS02 rna ? GO:0001649 ... Q9BZE4 37410842
    810139 8fle:SV (2.48) BS01 rna ? GO:0003735 ... Q9UHA3 37410842
    810140 8fle:SV (2.48) BS02 ZN ? GO:0003735 ... Q9UHA3 37410842
    810141 8flf:BE (2.65) BS01 rna ? GO:0000122 ... P27635 37410842
    810142 8flf:BE (2.65) BS02 rna ? GO:0000122 ... P27635 37410842
    810143 8flf:L5 (2.65) BS01 rna ? GO:0000027 ... P62913 37410842
    810144 8flf:L5 (2.65) BS02 rna ? GO:0000027 ... P62913 37410842
    810145 8flf:L6 (2.65) BS01 rna ? GO:0002181 ... P26373 37410842
    810146 8flf:L6 (2.65) BS02 rna ? GO:0002181 ... P26373 37410842
    810147 8flf:L7 (2.65) BS01 rna ? GO:0002181 ... P40429 37410842
    810148 8flf:L8 (2.65) BS01 rna ? GO:0002181 ... P50914 37410842
    810149 8flf:L9 (2.65) BS01 rna ? GO:0002181 ... P61313 37410842
    810150 8flf:L9 (2.65) BS02 rna ? GO:0002181 ... P61313 37410842
    810151 8flf:LA (2.65) BS01 rna ? GO:0002181 ... P18621 37410842
    810152 8flf:LA (2.65) BS02 rna ? GO:0002181 ... P18621 37410842
    810153 8flf:LB (2.65) BS01 rna ? GO:0002181 ... Q07020 37410842
    810154 8flf:LC (2.65) BS01 rna ? GO:0002181 ... Q02543 37410842
    810155 8flf:LC (2.65) BS02 rna ? GO:0002181 ... Q02543 37410842
    810156 8flf:LD (2.65) BS01 rna ? GO:0002181 ... P84098 37410842
    810157 8flf:LE (2.65) BS01 rna ? GO:0001650 ... P46778 37410842
    810158 8flf:LE (2.65) BS02 rna ? GO:0001650 ... P46778 37410842
    810159 8flf:LF (2.65) BS01 rna ? GO:0002181 ... P35268 37410842
    810160 8flf:LG (2.65) BS01 rna ? GO:0000122 ... P62829 37410842
    810161 8flf:LH (2.65) BS01 rna ? GO:0002181 ... P62750 37410842
    810162 8flf:LH (2.65) BS02 rna ? GO:0002181 ... P62750 37410842
    810163 8flf:LI (2.65) BS01 rna ? GO:0002181 ... P61254 37410842
    810164 8flf:LI (2.65) BS02 rna ? GO:0002181 ... P61254 37410842
    810165 8flf:LJ (2.65) BS01 rna ? GO:0002181 ... P61353 37410842
    810166 8flf:LK (2.65) BS01 rna ? GO:0002181 ... P46776 37410842
    810167 8flf:LL (2.65) BS01 rna ? GO:0002181 ... P46779 37410842
    810168 8flf:LM (2.65) BS01 rna ? GO:0002181 ... P47914 37410842
    810169 8flf:LM (2.65) BS02 MG ? GO:0002181 ... P47914 37410842
    810170 8flf:LN (2.65) BS01 rna ? GO:0002181 ... P39023 37410842
    810171 8flf:LO (2.65) BS01 rna ? GO:0002181 ... P62888 37410842
    810172 8flf:LP (2.65) BS01 rna ? GO:0002181 ... P62899 37410842
    810173 8flf:LQ (2.65) BS01 rna ? GO:0002181 ... P62910 37410842
    810174 8flf:LQ (2.65) BS02 MG ? GO:0002181 ... P62910 37410842
    810175 8flf:LR (2.65) BS01 rna ? GO:0002181 ... P49207 37410842
    810176 8flf:LR (2.65) BS02 ZN ? GO:0002181 ... P49207 37410842
    810177 8flf:LS (2.65) BS01 rna ? GO:0000463 ... P42766 37410842
    810178 8flf:LS (2.65) BS02 rna ? GO:0000463 ... P42766 37410842
    810179 8flf:LT (2.65) BS01 rna ? GO:0002181 ... P18077 37410842
    810180 8flf:LT (2.65) BS02 MG ? GO:0002181 ... P18077 37410842
    810181 8flf:LU (2.65) BS01 rna ? GO:0002181 ... Q9Y3U8 37410842
    810182 8flf:LV (2.65) BS01 rna ? GO:0002181 ... P83881 37410842
    810183 8flf:LV (2.65) BS02 ZN ? GO:0002181 ... P83881 37410842
    810184 8flf:LW (2.65) BS01 rna ? GO:0000448 ... P61927 37410842
    810185 8flf:LW (2.65) BS02 rna ? GO:0000448 ... P61927 37410842
    810186 8flf:LW (2.65) BS03 ZN ? GO:0000448 ... P61927 37410842
    810187 8flf:LX (2.65) BS01 rna ? GO:0002181 ... P61513 37410842
    810188 8flf:LX (2.65) BS02 ZN ? GO:0002181 ... P61513 37410842
    810189 8flf:LY (2.65) BS01 rna ? GO:0002181 ... P63173 37410842
    810190 8flf:LZ (2.65) BS01 rna ? GO:0002181 ... P62891 37410842
    810191 8flf:LZ (2.65) BS02 rna ? GO:0002181 ... P62891 37410842
    810192 8flf:NK (2.65) BS01 rna ? GO:0003723 ... Q9BRT6 37410842
    810193 8flf:NP (2.65) BS01 rna ? GO:0003676 ... O00488 37410842
    810194 8flf:NP (2.65) BS02 ZN ? GO:0003676 ... O00488 37410842
    810195 8flf:SA (2.65) BS01 rna ? GO:0002181 ... P36578 37410842
    810196 8flf:SA (2.65) BS02 rna ? GO:0002181 ... P36578 37410842
    810197 8flf:SB (2.65) BS01 rna ? GO:0000027 ... P46777 37410842
    810198 8flf:SB (2.65) BS02 rna ? GO:0000027 ... P46777 37410842
    810199 8flf:SC (2.65) BS01 rna ? GO:0002181 ... Q02878 37410842
    810200 8flf:SD (2.65) BS01 rna ? GO:0000463 ... P18124 37410842

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).