SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    810401 8g2b:2I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    810402 8g2b:2N (2.55) BS01 rna ? GO:0003729 ... P60488 38238495
    810403 8g2b:2O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    810404 8g2b:2O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    810405 8g2b:2P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    810406 8g2b:2Q (2.55) BS01 rna ? GO:0000049 ... P60489 38238495
    810407 8g2b:2Q (2.55) BS02 rna ? GO:0000049 ... P60489 38238495
    810408 8g2b:2Q (2.55) BS03 rna ? GO:0000049 ... P60489 38238495
    810409 8g2b:2Q (2.55) BS04 MG ? GO:0000049 ... P60489 38238495
    810410 8g2b:2Q (2.55) BS05 MG ? GO:0000049 ... P60489 38238495
    810411 8g2b:2Q (2.55) BS06 MG ? GO:0000049 ... P60489 38238495
    810412 8g2b:2R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    810413 8g2b:2S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    810414 8g2b:2S (2.55) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    810415 8g2b:2T (2.55) BS01 rna ? GO:0003735 ... P60490 38238495
    810416 8g2b:2T (2.55) BS02 rna ? GO:0003735 ... P60490 38238495
    810417 8g2b:2T (2.55) BS03 MG ? GO:0003735 ... P60490 38238495
    810418 8g2b:2U (2.55) BS01 rna ? GO:0000027 ... P60491 38238495
    810419 8g2b:2U (2.55) BS02 MG ? GO:0000027 ... P60491 38238495
    810420 8g2b:2V (2.55) BS01 rna ? GO:0003723 ... P60492 38238495
    810421 8g2b:2V (2.55) BS02 MG ? GO:0003723 ... P60492 38238495
    810422 8g2b:2W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    810423 8g2b:2W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    810424 8g2b:2X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    810425 8g2b:2X (2.55) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    810426 8g2b:2Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    810427 8g2b:2Y (2.55) BS02 ZN ? GO:0003723 ... Q5SHP9 38238495
    810428 8g2b:2Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    810429 8g2b:2Z (2.55) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    810430 8g2b:2b (2.55) BS01 rna ? GO:0003735 ... P80371 38238495
    810431 8g2b:2c (2.55) BS01 rna ? GO:0003676 ... P80372 38238495
    810432 8g2b:2d (2.55) BS01 rna ? GO:0003723 ... P80373 38238495
    810433 8g2b:2d (2.55) BS02 MG ? GO:0003723 ... P80373 38238495
    810434 8g2b:2d (2.55) BS03 SF4 ? GO:0003723 ... P80373 38238495
    810435 8g2b:2e (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    810436 8g2b:2e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    810437 8g2b:2f (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    810438 8g2b:2f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 38238495
    810439 8g2b:2g (2.55) BS01 rna ? GO:0000049 ... P17291 38238495
    810440 8g2b:2g (2.55) BS02 rna ? GO:0000049 ... P17291 38238495
    810441 8g2b:2h (2.55) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    810442 8g2b:2i (2.55) BS01 rna ? GO:0000049 ... P80374 38238495
    810443 8g2b:2j (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    810444 8g2b:2k (2.55) BS01 rna ? GO:0003735 ... P80376 38238495
    810445 8g2b:2k (2.55) BS02 MG ? GO:0003735 ... P80376 38238495
    810446 8g2b:2l (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    810447 8g2b:2l (2.55) BS02 rna ? GO:0000049 ... Q5SHN3 38238495
    810448 8g2b:2l (2.55) BS03 MG ? GO:0000049 ... Q5SHN3 38238495
    810449 8g2b:2l (2.55) BS04 MG ? GO:0000049 ... Q5SHN3 38238495
    810450 8g2b:2l (2.55) BS05 MG ? GO:0000049 ... Q5SHN3 38238495
    810451 8g2b:2m (2.55) BS01 rna ? GO:0000049 ... P80377 38238495
    810452 8g2b:2m (2.55) BS02 rna ? GO:0000049 ... P80377 38238495
    810453 8g2b:2n (2.55) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    810454 8g2b:2n (2.55) BS02 ZN ? GO:0003735 ... P0DOY6 38238495
    810455 8g2b:2o (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    810456 8g2b:2o (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    810457 8g2b:2p (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    810458 8g2b:2q (2.55) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    810459 8g2b:2q (2.55) BS02 MG ? GO:0003735 ... P0DOY7 38238495
    810460 8g2b:2q (2.55) BS03 MG ? GO:0003735 ... P0DOY7 38238495
    810461 8g2b:2r (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    810462 8g2b:2s (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    810463 8g2b:2t (2.55) BS01 rna ? GO:0003723 ... P80380 38238495
    810464 8g2b:2t (2.55) BS02 MG ? GO:0003723 ... P80380 38238495
    810465 8g2c:10 (2.65) BS01 rna ? GO:0003735 ... P60493 38238495
    810466 8g2c:10 (2.65) BS02 rna ? GO:0003735 ... P60493 38238495
    810467 8g2c:10 (2.65) BS03 rna ? GO:0003735 ... P60493 38238495
    810468 8g2c:10 (2.65) BS04 MG ? GO:0003735 ... P60493 38238495
    810469 8g2c:10 (2.65) BS05 MG ? GO:0003735 ... P60493 38238495
    810470 8g2c:10 (2.65) BS06 MG ? GO:0003735 ... P60493 38238495
    810471 8g2c:11 (2.65) BS01 rna ? GO:0003735 ... P60494 38238495
    810472 8g2c:11 (2.65) BS02 rna ? GO:0003735 ... P60494 38238495
    810473 8g2c:11 (2.65) BS03 MG ? GO:0003735 ... P60494 38238495
    810474 8g2c:12 (2.65) BS01 rna ? GO:0003735 ... Q5SHP6 38238495
    810475 8g2c:12 (2.65) BS02 MG ? GO:0003735 ... Q5SHP6 38238495
    810476 8g2c:13 (2.65) BS01 rna ? GO:0003735 ... Q5SHQ6 38238495
    810477 8g2c:13 (2.65) BS02 rna ? GO:0003735 ... Q5SHQ6 38238495
    810478 8g2c:13 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 38238495
    810479 8g2c:13 (2.65) BS04 MG ? GO:0003735 ... Q5SHQ6 38238495
    810480 8g2c:14 (2.65) BS01 rna ? GO:0003735 ... Q5SJE1 38238495
    810481 8g2c:14 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 38238495
    810482 8g2c:15 (2.65) BS01 rna ? GO:0003735 ... P80339 38238495
    810483 8g2c:15 (2.65) BS02 MG ? GO:0003735 ... P80339 38238495
    810484 8g2c:15 (2.65) BS03 ZN ? GO:0003735 ... P80339 38238495
    810485 8g2c:16 (2.65) BS01 rna ? GO:0000049 ... P35871 38238495
    810486 8g2c:16 (2.65) BS02 MG ? GO:0000049 ... P35871 38238495
    810487 8g2c:16 (2.65) BS03 ZN ? GO:0000049 ... P35871 38238495
    810488 8g2c:17 (2.65) BS01 rna ? GO:0003735 ... P80340 38238495
    810489 8g2c:17 (2.65) BS02 MG ? GO:0003735 ... P80340 38238495
    810490 8g2c:17 (2.65) BS03 MG ? GO:0003735 ... P80340 38238495
    810491 8g2c:17 (2.65) BS04 MG ? GO:0003735 ... P80340 38238495
    810492 8g2c:17 (2.65) BS05 MG ? GO:0003735 ... P80340 38238495
    810493 8g2c:18 (2.65) BS01 rna ? GO:0003735 ... Q5SKU1 38238495
    810494 8g2c:18 (2.65) BS02 MG ? GO:0003735 ... Q5SKU1 38238495
    810495 8g2c:18 (2.65) BS03 MG ? GO:0003735 ... Q5SKU1 38238495
    810496 8g2c:18 (2.65) BS04 MG ? GO:0003735 ... Q5SKU1 38238495
    810497 8g2c:18 (2.65) BS05 MG ? GO:0003735 ... Q5SKU1 38238495
    810498 8g2c:19 (2.65) BS01 rna ? GO:0003735 ... Q5SHR2 38238495
    810499 8g2c:19 (2.65) BS02 ZN ? GO:0003735 ... Q5SHR2 38238495
    810500 8g2c:1D (2.65) BS01 rna ? GO:0002181 ... P60405 38238495
    810501 8g2c:1D (2.65) BS02 rna ? GO:0002181 ... P60405 38238495
    810502 8g2c:1D (2.65) BS03 MG ? GO:0002181 ... P60405 38238495
    810503 8g2c:1D (2.65) BS04 MG ? GO:0002181 ... P60405 38238495
    810504 8g2c:1D (2.65) BS05 MG ? GO:0002181 ... P60405 38238495
    810505 8g2c:1D (2.65) BS06 MG ? GO:0002181 ... P60405 38238495
    810506 8g2c:1D (2.65) BS07 MG ? GO:0002181 ... P60405 38238495
    810507 8g2c:1D (2.65) BS08 MG ? GO:0002181 ... P60405 38238495
    810508 8g2c:1D (2.65) BS09 MG ? GO:0002181 ... P60405 38238495
    810509 8g2c:1D (2.65) BS10 MG ? GO:0002181 ... P60405 38238495
    810510 8g2c:1D (2.65) BS11 MG ? GO:0002181 ... P60405 38238495
    810511 8g2c:1D (2.65) BS12 MG ? GO:0002181 ... P60405 38238495
    810512 8g2c:1D (2.65) BS13 MG ? GO:0002181 ... P60405 38238495
    810513 8g2c:1E (2.65) BS01 rna ? GO:0003735 ... Q5SHN8 38238495
    810514 8g2c:1E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 38238495
    810515 8g2c:1E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 38238495
    810516 8g2c:1E (2.65) BS04 MG ? GO:0003735 ... Q5SHN8 38238495
    810517 8g2c:1F (2.65) BS01 rna ? GO:0003735 ... Q5SHN9 38238495
    810518 8g2c:1F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 38238495
    810519 8g2c:1F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 38238495
    810520 8g2c:1F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 38238495
    810521 8g2c:1F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 38238495
    810522 8g2c:1F (2.65) BS06 MG ? GO:0003735 ... Q5SHN9 38238495
    810523 8g2c:1F (2.65) BS07 MG ? GO:0003735 ... Q5SHN9 38238495
    810524 8g2c:1F (2.65) BS08 MG ? GO:0003735 ... Q5SHN9 38238495
    810525 8g2c:1F (2.65) BS09 MG ? GO:0003735 ... Q5SHN9 38238495
    810526 8g2c:1F (2.65) BS10 MG ? GO:0003735 ... Q5SHN9 38238495
    810527 8g2c:1F (2.65) BS11 MG ? GO:0003735 ... Q5SHN9 38238495
    810528 8g2c:1G (2.65) BS01 rna ? GO:0000049 ... Q5SHQ0 38238495
    810529 8g2c:1G (2.65) BS02 rna ? GO:0000049 ... Q5SHQ0 38238495
    810530 8g2c:1G (2.65) BS03 rna ? GO:0000049 ... Q5SHQ0 38238495
    810531 8g2c:1G (2.65) BS04 MG ? GO:0000049 ... Q5SHQ0 38238495
    810532 8g2c:1H (2.65) BS01 rna ? GO:0002181 ... P0DOY8 38238495
    810533 8g2c:1I (2.65) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    810534 8g2c:1I (2.65) BS02 MG ? GO:0003735 ... Q5SLQ1 38238495
    810535 8g2c:1N (2.65) BS01 rna ? GO:0003729 ... P60488 38238495
    810536 8g2c:1N (2.65) BS02 MG ? GO:0003729 ... P60488 38238495
    810537 8g2c:1N (2.65) BS03 MG ? GO:0003729 ... P60488 38238495
    810538 8g2c:1O (2.65) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    810539 8g2c:1O (2.65) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    810540 8g2c:1O (2.65) BS03 MG ? GO:0003735 ... Q5SHP8 38238495
    810541 8g2c:1O (2.65) BS04 MG ? GO:0003735 ... Q5SHP8 38238495
    810542 8g2c:1O (2.65) BS05 MG ? GO:0003735 ... Q5SHP8 38238495
    810543 8g2c:1P (2.65) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    810544 8g2c:1P (2.65) BS02 MG ? GO:0003735 ... Q5SHQ7 38238495
    810545 8g2c:1P (2.65) BS03 MG ? GO:0003735 ... Q5SHQ7 38238495
    810546 8g2c:1P (2.65) BS04 MG ? GO:0003735 ... Q5SHQ7 38238495
    810547 8g2c:1P (2.65) BS05 MG ? GO:0003735 ... Q5SHQ7 38238495
    810548 8g2c:1P (2.65) BS06 MG ? GO:0003735 ... Q5SHQ7 38238495
    810549 8g2c:1P (2.65) BS07 MG ? GO:0003735 ... Q5SHQ7 38238495
    810550 8g2c:1Q (2.65) BS01 rna ? GO:0000049 ... P60489 38238495
    810551 8g2c:1Q (2.65) BS02 rna ? GO:0000049 ... P60489 38238495
    810552 8g2c:1Q (2.65) BS03 rna ? GO:0000049 ... P60489 38238495
    810553 8g2c:1Q (2.65) BS04 rna ? GO:0000049 ... P60489 38238495
    810554 8g2c:1Q (2.65) BS05 MG ? GO:0000049 ... P60489 38238495
    810555 8g2c:1Q (2.65) BS06 MG ? GO:0000049 ... P60489 38238495
    810556 8g2c:1Q (2.65) BS07 MG ? GO:0000049 ... P60489 38238495
    810557 8g2c:1Q (2.65) BS08 MG ? GO:0000049 ... P60489 38238495
    810558 8g2c:1R (2.65) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    810559 8g2c:1R (2.65) BS02 MG ? GO:0003735 ... Q9Z9H5 38238495
    810560 8g2c:1R (2.65) BS03 MG ? GO:0003735 ... Q9Z9H5 38238495
    810561 8g2c:1S (2.65) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    810562 8g2c:1S (2.65) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    810563 8g2c:1S (2.65) BS03 MG ? GO:0003735 ... Q5SHQ4 38238495
    810564 8g2c:1S (2.65) BS04 MG ? GO:0003735 ... Q5SHQ4 38238495
    810565 8g2c:1T (2.65) BS01 rna ? GO:0003735 ... P60490 38238495
    810566 8g2c:1T (2.65) BS02 rna ? GO:0003735 ... P60490 38238495
    810567 8g2c:1U (2.65) BS01 rna ? GO:0000027 ... P60491 38238495
    810568 8g2c:1U (2.65) BS02 MG ? GO:0000027 ... P60491 38238495
    810569 8g2c:1U (2.65) BS03 MG ? GO:0000027 ... P60491 38238495
    810570 8g2c:1U (2.65) BS04 MG ? GO:0000027 ... P60491 38238495
    810571 8g2c:1U (2.65) BS05 MG ? GO:0000027 ... P60491 38238495
    810572 8g2c:1U (2.65) BS06 MG ? GO:0000027 ... P60491 38238495
    810573 8g2c:1U (2.65) BS07 MG ? GO:0000027 ... P60491 38238495
    810574 8g2c:1U (2.65) BS08 MG ? GO:0000027 ... P60491 38238495
    810575 8g2c:1V (2.65) BS01 rna ? GO:0003723 ... P60492 38238495
    810576 8g2c:1V (2.65) BS02 MG ? GO:0003723 ... P60492 38238495
    810577 8g2c:1V (2.65) BS03 MG ? GO:0003723 ... P60492 38238495
    810578 8g2c:1V (2.65) BS04 MG ? GO:0003723 ... P60492 38238495
    810579 8g2c:1V (2.65) BS05 MG ? GO:0003723 ... P60492 38238495
    810580 8g2c:1V (2.65) BS06 MG ? GO:0003723 ... P60492 38238495
    810581 8g2c:1W (2.65) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    810582 8g2c:1W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    810583 8g2c:1W (2.65) BS03 MG ? GO:0003735 ... Q5SHP3 38238495
    810584 8g2c:1W (2.65) BS04 MG ? GO:0003735 ... Q5SHP3 38238495
    810585 8g2c:1W (2.65) BS05 MG ? GO:0003735 ... Q5SHP3 38238495
    810586 8g2c:1X (2.65) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    810587 8g2c:1X (2.65) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    810588 8g2c:1X (2.65) BS03 MG ? GO:0003735 ... Q5SHP0 38238495
    810589 8g2c:1X (2.65) BS04 MG ? GO:0003735 ... Q5SHP0 38238495
    810590 8g2c:1X (2.65) BS05 MG ? GO:0003735 ... Q5SHP0 38238495
    810591 8g2c:1X (2.65) BS06 MG ? GO:0003735 ... Q5SHP0 38238495
    810592 8g2c:1Y (2.65) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    810593 8g2c:1Y (2.65) BS02 MG ? GO:0003723 ... Q5SHP9 38238495
    810594 8g2c:1Y (2.65) BS03 ZN ? GO:0003723 ... Q5SHP9 38238495
    810595 8g2c:1Z (2.65) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    810596 8g2c:1Z (2.65) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    810597 8g2c:1b (2.65) BS01 rna ? GO:0003735 ... P80371 38238495
    810598 8g2c:1c (2.65) BS01 rna ? GO:0003676 ... P80372 38238495
    810599 8g2c:1d (2.65) BS01 rna ? GO:0003723 ... P80373 38238495
    810600 8g2c:1d (2.65) BS02 SF4 ? GO:0003723 ... P80373 38238495

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).