SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    810601 8g2c:1e (2.65) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    810602 8g2c:1e (2.65) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    810603 8g2c:1e (2.65) BS03 MG ? GO:0003723 ... Q5SHQ5 38238495
    810604 8g2c:1f (2.65) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    810605 8g2c:1f (2.65) BS02 MG ? GO:0003735 ... Q5SLP8 38238495
    810606 8g2c:1g (2.65) BS01 rna ? GO:0000049 ... P17291 38238495
    810607 8g2c:1g (2.65) BS02 rna ? GO:0000049 ... P17291 38238495
    810608 8g2c:1h (2.65) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    810609 8g2c:1i (2.65) BS01 rna ? GO:0000049 ... P80374 38238495
    810610 8g2c:1i (2.65) BS02 rna ? GO:0000049 ... P80374 38238495
    810611 8g2c:1j (2.65) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    810612 8g2c:1k (2.65) BS01 rna ? GO:0003735 ... P80376 38238495
    810613 8g2c:1k (2.65) BS02 MG ? GO:0003735 ... P80376 38238495
    810614 8g2c:1l (2.65) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    810615 8g2c:1l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 38238495
    810616 8g2c:1m (2.65) BS01 rna ? GO:0000049 ... P80377 38238495
    810617 8g2c:1m (2.65) BS02 rna ? GO:0000049 ... P80377 38238495
    810618 8g2c:1m (2.65) BS03 rna ? GO:0000049 ... P80377 38238495
    810619 8g2c:1m (2.65) BS04 MG ? GO:0000049 ... P80377 38238495
    810620 8g2c:1n (2.65) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    810621 8g2c:1n (2.65) BS02 ZN ? GO:0003735 ... P0DOY6 38238495
    810622 8g2c:1o (2.65) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    810623 8g2c:1o (2.65) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    810624 8g2c:1p (2.65) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    810625 8g2c:1q (2.65) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    810626 8g2c:1r (2.65) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    810627 8g2c:1s (2.65) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    810628 8g2c:1t (2.65) BS01 rna ? GO:0003723 ... P80380 38238495
    810629 8g2c:20 (2.65) BS01 rna ? GO:0003735 ... P60493 38238495
    810630 8g2c:20 (2.65) BS02 rna ? GO:0003735 ... P60493 38238495
    810631 8g2c:20 (2.65) BS03 rna ? GO:0003735 ... P60493 38238495
    810632 8g2c:21 (2.65) BS01 rna ? GO:0003735 ... P60494 38238495
    810633 8g2c:21 (2.65) BS02 rna ? GO:0003735 ... P60494 38238495
    810634 8g2c:22 (2.65) BS01 rna ? GO:0003735 ... Q5SHP6 38238495
    810635 8g2c:23 (2.65) BS01 rna ? GO:0003735 ... Q5SHQ6 38238495
    810636 8g2c:23 (2.65) BS02 rna ? GO:0003735 ... Q5SHQ6 38238495
    810637 8g2c:23 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 38238495
    810638 8g2c:24 (2.65) BS01 rna ? GO:0003735 ... Q5SJE1 38238495
    810639 8g2c:24 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 38238495
    810640 8g2c:25 (2.65) BS01 rna ? GO:0003735 ... P80339 38238495
    810641 8g2c:25 (2.65) BS02 ZN ? GO:0003735 ... P80339 38238495
    810642 8g2c:26 (2.65) BS01 rna ? GO:0000049 ... P35871 38238495
    810643 8g2c:26 (2.65) BS02 ZN ? GO:0000049 ... P35871 38238495
    810644 8g2c:27 (2.65) BS01 rna ? GO:0003735 ... P80340 38238495
    810645 8g2c:28 (2.65) BS01 rna ? GO:0003735 ... Q5SKU1 38238495
    810646 8g2c:29 (2.65) BS01 rna ? GO:0003735 ... Q5SHR2 38238495
    810647 8g2c:29 (2.65) BS02 MG ? GO:0003735 ... Q5SHR2 38238495
    810648 8g2c:29 (2.65) BS03 ZN ? GO:0003735 ... Q5SHR2 38238495
    810649 8g2c:2D (2.65) BS01 rna ? GO:0002181 ... P60405 38238495
    810650 8g2c:2D (2.65) BS02 rna ? GO:0002181 ... P60405 38238495
    810651 8g2c:2D (2.65) BS03 MG ? GO:0002181 ... P60405 38238495
    810652 8g2c:2D (2.65) BS04 MG ? GO:0002181 ... P60405 38238495
    810653 8g2c:2D (2.65) BS05 MG ? GO:0002181 ... P60405 38238495
    810654 8g2c:2D (2.65) BS06 MG ? GO:0002181 ... P60405 38238495
    810655 8g2c:2D (2.65) BS07 MG ? GO:0002181 ... P60405 38238495
    810656 8g2c:2D (2.65) BS08 MG ? GO:0002181 ... P60405 38238495
    810657 8g2c:2E (2.65) BS01 rna ? GO:0003735 ... Q5SHN8 38238495
    810658 8g2c:2E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 38238495
    810659 8g2c:2F (2.65) BS01 rna ? GO:0003735 ... Q5SHN9 38238495
    810660 8g2c:2F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 38238495
    810661 8g2c:2F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 38238495
    810662 8g2c:2F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 38238495
    810663 8g2c:2F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 38238495
    810664 8g2c:2G (2.65) BS01 rna ? GO:0000049 ... Q5SHQ0 38238495
    810665 8g2c:2G (2.65) BS02 rna ? GO:0000049 ... Q5SHQ0 38238495
    810666 8g2c:2G (2.65) BS03 rna ? GO:0000049 ... Q5SHQ0 38238495
    810667 8g2c:2G (2.65) BS04 MG ? GO:0000049 ... Q5SHQ0 38238495
    810668 8g2c:2H (2.65) BS01 rna ? GO:0002181 ... P0DOY8 38238495
    810669 8g2c:2I (2.65) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    810670 8g2c:2N (2.65) BS01 rna ? GO:0003729 ... P60488 38238495
    810671 8g2c:2O (2.65) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    810672 8g2c:2O (2.65) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    810673 8g2c:2P (2.65) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    810674 8g2c:2Q (2.65) BS01 rna ? GO:0000049 ... P60489 38238495
    810675 8g2c:2Q (2.65) BS02 rna ? GO:0000049 ... P60489 38238495
    810676 8g2c:2Q (2.65) BS03 rna ? GO:0000049 ... P60489 38238495
    810677 8g2c:2Q (2.65) BS04 rna ? GO:0000049 ... P60489 38238495
    810678 8g2c:2Q (2.65) BS05 MG ? GO:0000049 ... P60489 38238495
    810679 8g2c:2Q (2.65) BS06 MG ? GO:0000049 ... P60489 38238495
    810680 8g2c:2R (2.65) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    810681 8g2c:2S (2.65) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    810682 8g2c:2S (2.65) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    810683 8g2c:2T (2.65) BS01 rna ? GO:0003735 ... P60490 38238495
    810684 8g2c:2T (2.65) BS02 rna ? GO:0003735 ... P60490 38238495
    810685 8g2c:2U (2.65) BS01 rna ? GO:0000027 ... P60491 38238495
    810686 8g2c:2U (2.65) BS02 MG ? GO:0000027 ... P60491 38238495
    810687 8g2c:2V (2.65) BS01 rna ? GO:0003723 ... P60492 38238495
    810688 8g2c:2V (2.65) BS02 MG ? GO:0003723 ... P60492 38238495
    810689 8g2c:2W (2.65) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    810690 8g2c:2W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    810691 8g2c:2X (2.65) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    810692 8g2c:2X (2.65) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    810693 8g2c:2Y (2.65) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    810694 8g2c:2Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 38238495
    810695 8g2c:2Z (2.65) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    810696 8g2c:2Z (2.65) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    810697 8g2c:2b (2.65) BS01 rna ? GO:0003735 ... P80371 38238495
    810698 8g2c:2c (2.65) BS01 rna ? GO:0003676 ... P80372 38238495
    810699 8g2c:2d (2.65) BS01 rna ? GO:0003723 ... P80373 38238495
    810700 8g2c:2d (2.65) BS02 MG ? GO:0003723 ... P80373 38238495
    810701 8g2c:2d (2.65) BS03 SF4 ? GO:0003723 ... P80373 38238495
    810702 8g2c:2e (2.65) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    810703 8g2c:2e (2.65) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    810704 8g2c:2f (2.65) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    810705 8g2c:2f (2.65) BS02 MG ? GO:0003735 ... Q5SLP8 38238495
    810706 8g2c:2g (2.65) BS01 rna ? GO:0000049 ... P17291 38238495
    810707 8g2c:2g (2.65) BS02 rna ? GO:0000049 ... P17291 38238495
    810708 8g2c:2h (2.65) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    810709 8g2c:2i (2.65) BS01 rna ? GO:0000049 ... P80374 38238495
    810710 8g2c:2j (2.65) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    810711 8g2c:2k (2.65) BS01 rna ? GO:0003735 ... P80376 38238495
    810712 8g2c:2k (2.65) BS02 MG ? GO:0003735 ... P80376 38238495
    810713 8g2c:2l (2.65) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    810714 8g2c:2l (2.65) BS02 rna ? GO:0000049 ... Q5SHN3 38238495
    810715 8g2c:2m (2.65) BS01 rna ? GO:0000049 ... P80377 38238495
    810716 8g2c:2m (2.65) BS02 rna ? GO:0000049 ... P80377 38238495
    810717 8g2c:2n (2.65) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    810718 8g2c:2n (2.65) BS02 ZN ? GO:0003735 ... P0DOY6 38238495
    810719 8g2c:2o (2.65) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    810720 8g2c:2o (2.65) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    810721 8g2c:2p (2.65) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    810722 8g2c:2q (2.65) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    810723 8g2c:2q (2.65) BS02 MG ? GO:0003735 ... P0DOY7 38238495
    810724 8g2c:2q (2.65) BS03 MG ? GO:0003735 ... P0DOY7 38238495
    810725 8g2c:2r (2.65) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    810726 8g2c:2s (2.65) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    810727 8g2c:2t (2.65) BS01 rna ? GO:0003723 ... P80380 38238495
    810728 8g2d:10 (2.7) BS01 rna ? GO:0003735 ... P60493 38238495
    810729 8g2d:10 (2.7) BS02 rna ? GO:0003735 ... P60493 38238495
    810730 8g2d:10 (2.7) BS03 MG ? GO:0003735 ... P60493 38238495
    810731 8g2d:10 (2.7) BS04 MG ? GO:0003735 ... P60493 38238495
    810732 8g2d:10 (2.7) BS05 MG ? GO:0003735 ... P60493 38238495
    810733 8g2d:11 (2.7) BS01 rna ? GO:0003735 ... P60494 38238495
    810734 8g2d:11 (2.7) BS02 rna ? GO:0003735 ... P60494 38238495
    810735 8g2d:11 (2.7) BS03 MG ? GO:0003735 ... P60494 38238495
    810736 8g2d:12 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 38238495
    810737 8g2d:12 (2.7) BS02 MG ? GO:0003735 ... Q5SHP6 38238495
    810738 8g2d:12 (2.7) BS03 MG ? GO:0003735 ... Q5SHP6 38238495
    810739 8g2d:13 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 38238495
    810740 8g2d:13 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 38238495
    810741 8g2d:13 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 38238495
    810742 8g2d:13 (2.7) BS04 MG ? GO:0003735 ... Q5SHQ6 38238495
    810743 8g2d:14 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 38238495
    810744 8g2d:14 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 38238495
    810745 8g2d:15 (2.7) BS01 rna ? GO:0003735 ... P80339 38238495
    810746 8g2d:15 (2.7) BS02 MG ? GO:0003735 ... P80339 38238495
    810747 8g2d:15 (2.7) BS03 ZN ? GO:0003735 ... P80339 38238495
    810748 8g2d:16 (2.7) BS01 rna ? GO:0000049 ... P35871 38238495
    810749 8g2d:16 (2.7) BS02 MG ? GO:0000049 ... P35871 38238495
    810750 8g2d:16 (2.7) BS03 MG ? GO:0000049 ... P35871 38238495
    810751 8g2d:16 (2.7) BS04 ZN ? GO:0000049 ... P35871 38238495
    810752 8g2d:17 (2.7) BS01 rna ? GO:0003735 ... P80340 38238495
    810753 8g2d:17 (2.7) BS02 MG ? GO:0003735 ... P80340 38238495
    810754 8g2d:17 (2.7) BS03 MG ? GO:0003735 ... P80340 38238495
    810755 8g2d:18 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 38238495
    810756 8g2d:18 (2.7) BS02 MG ? GO:0003735 ... Q5SKU1 38238495
    810757 8g2d:19 (2.7) BS01 rna ? GO:0003735 ... Q5SHR2 38238495
    810758 8g2d:19 (2.7) BS02 ZN ? GO:0003735 ... Q5SHR2 38238495
    810759 8g2d:1D (2.7) BS01 rna ? GO:0002181 ... P60405 38238495
    810760 8g2d:1D (2.7) BS02 rna ? GO:0002181 ... P60405 38238495
    810761 8g2d:1D (2.7) BS03 MG ? GO:0002181 ... P60405 38238495
    810762 8g2d:1D (2.7) BS04 MG ? GO:0002181 ... P60405 38238495
    810763 8g2d:1D (2.7) BS05 MG ? GO:0002181 ... P60405 38238495
    810764 8g2d:1D (2.7) BS06 MG ? GO:0002181 ... P60405 38238495
    810765 8g2d:1D (2.7) BS07 MG ? GO:0002181 ... P60405 38238495
    810766 8g2d:1D (2.7) BS08 MG ? GO:0002181 ... P60405 38238495
    810767 8g2d:1D (2.7) BS09 MG ? GO:0002181 ... P60405 38238495
    810768 8g2d:1D (2.7) BS10 MG ? GO:0002181 ... P60405 38238495
    810769 8g2d:1D (2.7) BS11 MG ? GO:0002181 ... P60405 38238495
    810770 8g2d:1D (2.7) BS12 MG ? GO:0002181 ... P60405 38238495
    810771 8g2d:1E (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 38238495
    810772 8g2d:1E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 38238495
    810773 8g2d:1E (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 38238495
    810774 8g2d:1E (2.7) BS04 MG ? GO:0003735 ... Q5SHN8 38238495
    810775 8g2d:1E (2.7) BS05 MG ? GO:0003735 ... Q5SHN8 38238495
    810776 8g2d:1E (2.7) BS06 MG ? GO:0003735 ... Q5SHN8 38238495
    810777 8g2d:1F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 38238495
    810778 8g2d:1F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 38238495
    810779 8g2d:1F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 38238495
    810780 8g2d:1F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 38238495
    810781 8g2d:1F (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 38238495
    810782 8g2d:1F (2.7) BS06 MG ? GO:0003735 ... Q5SHN9 38238495
    810783 8g2d:1F (2.7) BS07 MG ? GO:0003735 ... Q5SHN9 38238495
    810784 8g2d:1F (2.7) BS08 MG ? GO:0003735 ... Q5SHN9 38238495
    810785 8g2d:1F (2.7) BS09 MG ? GO:0003735 ... Q5SHN9 38238495
    810786 8g2d:1G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 38238495
    810787 8g2d:1G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 38238495
    810788 8g2d:1G (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 38238495
    810789 8g2d:1G (2.7) BS04 MG ? GO:0000049 ... Q5SHQ0 38238495
    810790 8g2d:1G (2.7) BS05 MG ? GO:0000049 ... Q5SHQ0 38238495
    810791 8g2d:1H (2.7) BS01 rna ? GO:0002181 ... P0DOY8 38238495
    810792 8g2d:1I (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    810793 8g2d:1I (2.7) BS02 MG ? GO:0003735 ... Q5SLQ1 38238495
    810794 8g2d:1N (2.7) BS01 rna ? GO:0003729 ... P60488 38238495
    810795 8g2d:1N (2.7) BS02 MG ? GO:0003729 ... P60488 38238495
    810796 8g2d:1N (2.7) BS03 MG ? GO:0003729 ... P60488 38238495
    810797 8g2d:1N (2.7) BS04 MG ? GO:0003729 ... P60488 38238495
    810798 8g2d:1O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    810799 8g2d:1O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    810800 8g2d:1O (2.7) BS03 MG ? GO:0003735 ... Q5SHP8 38238495

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).