SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    810801 8g2d:1O (2.7) BS04 MG ? GO:0003735 ... Q5SHP8 38238495
    810802 8g2d:1P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    810803 8g2d:1P (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 38238495
    810804 8g2d:1P (2.7) BS03 MG ? GO:0003735 ... Q5SHQ7 38238495
    810805 8g2d:1P (2.7) BS04 MG ? GO:0003735 ... Q5SHQ7 38238495
    810806 8g2d:1P (2.7) BS05 MG ? GO:0003735 ... Q5SHQ7 38238495
    810807 8g2d:1P (2.7) BS06 MG ? GO:0003735 ... Q5SHQ7 38238495
    810808 8g2d:1Q (2.7) BS01 rna ? GO:0000049 ... P60489 38238495
    810809 8g2d:1Q (2.7) BS02 rna ? GO:0000049 ... P60489 38238495
    810810 8g2d:1Q (2.7) BS03 rna ? GO:0000049 ... P60489 38238495
    810811 8g2d:1Q (2.7) BS04 MG ? GO:0000049 ... P60489 38238495
    810812 8g2d:1Q (2.7) BS05 MG ? GO:0000049 ... P60489 38238495
    810813 8g2d:1Q (2.7) BS06 MG ? GO:0000049 ... P60489 38238495
    810814 8g2d:1Q (2.7) BS07 MG ? GO:0000049 ... P60489 38238495
    810815 8g2d:1Q (2.7) BS08 MG ? GO:0000049 ... P60489 38238495
    810816 8g2d:1Q (2.7) BS09 MG ? GO:0000049 ... P60489 38238495
    810817 8g2d:1R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    810818 8g2d:1R (2.7) BS02 MG ? GO:0003735 ... Q9Z9H5 38238495
    810819 8g2d:1R (2.7) BS03 MG ? GO:0003735 ... Q9Z9H5 38238495
    810820 8g2d:1R (2.7) BS04 MG ? GO:0003735 ... Q9Z9H5 38238495
    810821 8g2d:1S (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    810822 8g2d:1S (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    810823 8g2d:1S (2.7) BS03 MG ? GO:0003735 ... Q5SHQ4 38238495
    810824 8g2d:1S (2.7) BS04 MG ? GO:0003735 ... Q5SHQ4 38238495
    810825 8g2d:1T (2.7) BS01 rna ? GO:0003735 ... P60490 38238495
    810826 8g2d:1T (2.7) BS02 rna ? GO:0003735 ... P60490 38238495
    810827 8g2d:1U (2.7) BS01 rna ? GO:0000027 ... P60491 38238495
    810828 8g2d:1U (2.7) BS02 MG ? GO:0000027 ... P60491 38238495
    810829 8g2d:1U (2.7) BS03 MG ? GO:0000027 ... P60491 38238495
    810830 8g2d:1U (2.7) BS04 MG ? GO:0000027 ... P60491 38238495
    810831 8g2d:1U (2.7) BS05 MG ? GO:0000027 ... P60491 38238495
    810832 8g2d:1U (2.7) BS06 MG ? GO:0000027 ... P60491 38238495
    810833 8g2d:1U (2.7) BS07 MG ? GO:0000027 ... P60491 38238495
    810834 8g2d:1U (2.7) BS08 MG ? GO:0000027 ... P60491 38238495
    810835 8g2d:1V (2.7) BS01 rna ? GO:0003723 ... P60492 38238495
    810836 8g2d:1V (2.7) BS02 MG ? GO:0003723 ... P60492 38238495
    810837 8g2d:1V (2.7) BS03 MG ? GO:0003723 ... P60492 38238495
    810838 8g2d:1V (2.7) BS04 MG ? GO:0003723 ... P60492 38238495
    810839 8g2d:1V (2.7) BS05 MG ? GO:0003723 ... P60492 38238495
    810840 8g2d:1W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    810841 8g2d:1W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    810842 8g2d:1W (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 38238495
    810843 8g2d:1W (2.7) BS04 MG ? GO:0003735 ... Q5SHP3 38238495
    810844 8g2d:1W (2.7) BS05 MG ? GO:0003735 ... Q5SHP3 38238495
    810845 8g2d:1W (2.7) BS06 MG ? GO:0003735 ... Q5SHP3 38238495
    810846 8g2d:1X (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    810847 8g2d:1X (2.7) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    810848 8g2d:1X (2.7) BS03 MG ? GO:0003735 ... Q5SHP0 38238495
    810849 8g2d:1X (2.7) BS04 MG ? GO:0003735 ... Q5SHP0 38238495
    810850 8g2d:1X (2.7) BS05 MG ? GO:0003735 ... Q5SHP0 38238495
    810851 8g2d:1X (2.7) BS06 MG ? GO:0003735 ... Q5SHP0 38238495
    810852 8g2d:1Y (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    810853 8g2d:1Y (2.7) BS02 MG ? GO:0003723 ... Q5SHP9 38238495
    810854 8g2d:1Y (2.7) BS03 ZN ? GO:0003723 ... Q5SHP9 38238495
    810855 8g2d:1Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    810856 8g2d:1Z (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    810857 8g2d:1Z (2.7) BS03 MG ? GO:0003723 ... Q5SHZ1 38238495
    810858 8g2d:1b (2.7) BS01 rna ? GO:0003735 ... P80371 38238495
    810859 8g2d:1b (2.7) BS02 MG ? GO:0003735 ... P80371 38238495
    810860 8g2d:1c (2.7) BS01 rna ? GO:0003676 ... P80372 38238495
    810861 8g2d:1d (2.7) BS01 rna ? GO:0003723 ... P80373 38238495
    810862 8g2d:1d (2.7) BS02 SF4 ? GO:0003723 ... P80373 38238495
    810863 8g2d:1e (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    810864 8g2d:1e (2.7) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    810865 8g2d:1e (2.7) BS03 MG ? GO:0003723 ... Q5SHQ5 38238495
    810866 8g2d:1f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    810867 8g2d:1g (2.7) BS01 rna ? GO:0000049 ... P17291 38238495
    810868 8g2d:1g (2.7) BS02 rna ? GO:0000049 ... P17291 38238495
    810869 8g2d:1h (2.7) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    810870 8g2d:1i (2.7) BS01 rna ? GO:0000049 ... P80374 38238495
    810871 8g2d:1i (2.7) BS02 rna ? GO:0000049 ... P80374 38238495
    810872 8g2d:1j (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    810873 8g2d:1k (2.7) BS01 rna ? GO:0003735 ... P80376 38238495
    810874 8g2d:1k (2.7) BS02 MG ? GO:0003735 ... P80376 38238495
    810875 8g2d:1l (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    810876 8g2d:1l (2.7) BS02 rna ? GO:0000049 ... Q5SHN3 38238495
    810877 8g2d:1m (2.7) BS01 rna ? GO:0000049 ... P80377 38238495
    810878 8g2d:1m (2.7) BS02 rna ? GO:0000049 ... P80377 38238495
    810879 8g2d:1m (2.7) BS03 rna ? GO:0000049 ... P80377 38238495
    810880 8g2d:1m (2.7) BS04 MG ? GO:0000049 ... P80377 38238495
    810881 8g2d:1n (2.7) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    810882 8g2d:1n (2.7) BS02 MG ? GO:0003735 ... P0DOY6 38238495
    810883 8g2d:1n (2.7) BS03 ZN ? GO:0003735 ... P0DOY6 38238495
    810884 8g2d:1o (2.7) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    810885 8g2d:1o (2.7) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    810886 8g2d:1p (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    810887 8g2d:1q (2.7) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    810888 8g2d:1r (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    810889 8g2d:1s (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    810890 8g2d:1t (2.7) BS01 rna ? GO:0003723 ... P80380 38238495
    810891 8g2d:20 (2.7) BS01 rna ? GO:0003735 ... P60493 38238495
    810892 8g2d:20 (2.7) BS02 rna ? GO:0003735 ... P60493 38238495
    810893 8g2d:21 (2.7) BS01 rna ? GO:0003735 ... P60494 38238495
    810894 8g2d:21 (2.7) BS02 rna ? GO:0003735 ... P60494 38238495
    810895 8g2d:21 (2.7) BS03 MG ? GO:0003735 ... P60494 38238495
    810896 8g2d:22 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 38238495
    810897 8g2d:23 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 38238495
    810898 8g2d:23 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 38238495
    810899 8g2d:23 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 38238495
    810900 8g2d:23 (2.7) BS04 MG ? GO:0003735 ... Q5SHQ6 38238495
    810901 8g2d:24 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 38238495
    810902 8g2d:24 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 38238495
    810903 8g2d:25 (2.7) BS01 rna ? GO:0003735 ... P80339 38238495
    810904 8g2d:25 (2.7) BS02 MG ? GO:0003735 ... P80339 38238495
    810905 8g2d:25 (2.7) BS03 ZN ? GO:0003735 ... P80339 38238495
    810906 8g2d:26 (2.7) BS01 rna ? GO:0000049 ... P35871 38238495
    810907 8g2d:26 (2.7) BS02 MG ? GO:0000049 ... P35871 38238495
    810908 8g2d:26 (2.7) BS03 ZN ? GO:0000049 ... P35871 38238495
    810909 8g2d:27 (2.7) BS01 rna ? GO:0003735 ... P80340 38238495
    810910 8g2d:28 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 38238495
    810911 8g2d:29 (2.7) BS01 rna ? GO:0003735 ... Q5SHR2 38238495
    810912 8g2d:29 (2.7) BS02 MG ? GO:0003735 ... Q5SHR2 38238495
    810913 8g2d:29 (2.7) BS03 ZN ? GO:0003735 ... Q5SHR2 38238495
    810914 8g2d:2D (2.7) BS01 rna ? GO:0002181 ... P60405 38238495
    810915 8g2d:2D (2.7) BS02 rna ? GO:0002181 ... P60405 38238495
    810916 8g2d:2D (2.7) BS03 MG ? GO:0002181 ... P60405 38238495
    810917 8g2d:2D (2.7) BS04 MG ? GO:0002181 ... P60405 38238495
    810918 8g2d:2D (2.7) BS05 MG ? GO:0002181 ... P60405 38238495
    810919 8g2d:2D (2.7) BS06 MG ? GO:0002181 ... P60405 38238495
    810920 8g2d:2E (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 38238495
    810921 8g2d:2E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 38238495
    810922 8g2d:2F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 38238495
    810923 8g2d:2F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 38238495
    810924 8g2d:2F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 38238495
    810925 8g2d:2F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 38238495
    810926 8g2d:2G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 38238495
    810927 8g2d:2G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 38238495
    810928 8g2d:2G (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 38238495
    810929 8g2d:2H (2.7) BS01 rna ? GO:0002181 ... P0DOY8 38238495
    810930 8g2d:2I (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    810931 8g2d:2N (2.7) BS01 rna ? GO:0003729 ... P60488 38238495
    810932 8g2d:2O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    810933 8g2d:2O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    810934 8g2d:2P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    810935 8g2d:2Q (2.7) BS01 rna ? GO:0000049 ... P60489 38238495
    810936 8g2d:2Q (2.7) BS02 rna ? GO:0000049 ... P60489 38238495
    810937 8g2d:2Q (2.7) BS03 rna ? GO:0000049 ... P60489 38238495
    810938 8g2d:2Q (2.7) BS04 MG ? GO:0000049 ... P60489 38238495
    810939 8g2d:2Q (2.7) BS05 MG ? GO:0000049 ... P60489 38238495
    810940 8g2d:2R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    810941 8g2d:2S (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    810942 8g2d:2S (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    810943 8g2d:2T (2.7) BS01 rna ? GO:0003735 ... P60490 38238495
    810944 8g2d:2T (2.7) BS02 rna ? GO:0003735 ... P60490 38238495
    810945 8g2d:2U (2.7) BS01 rna ? GO:0000027 ... P60491 38238495
    810946 8g2d:2U (2.7) BS02 MG ? GO:0000027 ... P60491 38238495
    810947 8g2d:2V (2.7) BS01 rna ? GO:0003723 ... P60492 38238495
    810948 8g2d:2V (2.7) BS02 MG ? GO:0003723 ... P60492 38238495
    810949 8g2d:2V (2.7) BS03 MG ? GO:0003723 ... P60492 38238495
    810950 8g2d:2V (2.7) BS04 MG ? GO:0003723 ... P60492 38238495
    810951 8g2d:2W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    810952 8g2d:2W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    810953 8g2d:2X (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    810954 8g2d:2X (2.7) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    810955 8g2d:2Y (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    810956 8g2d:2Y (2.7) BS02 ZN ? GO:0003723 ... Q5SHP9 38238495
    810957 8g2d:2Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    810958 8g2d:2Z (2.7) BS02 MG ? GO:0003723 ... Q5SHZ1 38238495
    810959 8g2d:2b (2.7) BS01 rna ? GO:0003735 ... P80371 38238495
    810960 8g2d:2c (2.7) BS01 rna ? GO:0003676 ... P80372 38238495
    810961 8g2d:2d (2.7) BS01 rna ? GO:0003723 ... P80373 38238495
    810962 8g2d:2d (2.7) BS02 MG ? GO:0003723 ... P80373 38238495
    810963 8g2d:2d (2.7) BS03 SF4 ? GO:0003723 ... P80373 38238495
    810964 8g2d:2e (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    810965 8g2d:2e (2.7) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    810966 8g2d:2f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    810967 8g2d:2f (2.7) BS02 MG ? GO:0003735 ... Q5SLP8 38238495
    810968 8g2d:2g (2.7) BS01 rna ? GO:0000049 ... P17291 38238495
    810969 8g2d:2g (2.7) BS02 rna ? GO:0000049 ... P17291 38238495
    810970 8g2d:2h (2.7) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    810971 8g2d:2i (2.7) BS01 rna ? GO:0000049 ... P80374 38238495
    810972 8g2d:2i (2.7) BS02 rna ? GO:0000049 ... P80374 38238495
    810973 8g2d:2j (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    810974 8g2d:2k (2.7) BS01 rna ? GO:0003735 ... P80376 38238495
    810975 8g2d:2k (2.7) BS02 MG ? GO:0003735 ... P80376 38238495
    810976 8g2d:2l (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    810977 8g2d:2l (2.7) BS02 MG ? GO:0000049 ... Q5SHN3 38238495
    810978 8g2d:2m (2.7) BS01 rna ? GO:0000049 ... P80377 38238495
    810979 8g2d:2n (2.7) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    810980 8g2d:2n (2.7) BS02 ZN ? GO:0003735 ... P0DOY6 38238495
    810981 8g2d:2o (2.7) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    810982 8g2d:2o (2.7) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    810983 8g2d:2p (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    810984 8g2d:2q (2.7) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    810985 8g2d:2q (2.7) BS02 MG ? GO:0003735 ... P0DOY7 38238495
    810986 8g2d:2q (2.7) BS03 MG ? GO:0003735 ... P0DOY7 38238495
    810987 8g2d:2r (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    810988 8g2d:2r (2.7) BS02 MG ? GO:0003735 ... Q5SLQ0 38238495
    810989 8g2d:2s (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    810990 8g2d:2t (2.7) BS01 rna ? GO:0003723 ... P80380 38238495
    810991 8g2d:2t (2.7) BS02 MG ? GO:0003723 ... P80380 38238495
    810992 8g2e:A (1.838) BS01 YII 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 37242488
    810993 8g2e:A (1.838) BS02 OXL 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 37242488
    810994 8g2e:A (1.838) BS03 MG 2.7.10.2
    2.7.11.1
    2.7.1.40
    GO:0000287 ... P14618 37242488
    810995 8g2f:A (2.06) BS01 DVS 2.1.1.319 GO:0016274 ... O60678 38045046
    810996 8g2g:A (2.02) BS01 YVU 2.1.1.319 GO:0016274 ... O60678 38045046
    810997 8g2g:B (2.02) BS01 YVU 2.1.1.319 GO:0016274 ... O60678 38045046
    810998 8g2h:A (1.49) BS01 YVU 2.1.1.319 GO:0016274 ... Q86X55 38045046
    810999 8g2i:A (2.17) BS01 I0B 2.1.1.319 GO:0016274 ... Q86X55 38045046
    811000 8g2j:C (3.3) BS01 BGC 2.4.1.12 GO:0005886 ... Q6J8X0 36798277

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).