SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    811401 8fpy:B (2.98) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811402 8fpy:C (2.98) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811403 8fpy:C (2.98) BS02 GLU ? GO:0005216 ... P19491 38409505
    811404 8fpy:C (2.98) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811405 8fpy:D (2.98) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811406 8fpy:D (2.98) BS02 GLU ? GO:0005216 ... P19491 38409505
    811407 8fpy:D (2.98) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811408 8fpz:A (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    811409 8fpz:A (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811410 8fpz:A (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811411 8fpz:B (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    811412 8fpz:B (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811413 8fpz:B (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811414 8fpz:C (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811415 8fpz:C (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    811416 8fpz:C (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811417 8fpz:D (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811418 8fpz:D (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    811419 8fpz:D (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811420 8fq2:A (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    811421 8fq2:A (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811422 8fq2:A (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811423 8fq2:B (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    811424 8fq2:B (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811425 8fq2:B (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811426 8fq2:C (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811427 8fq2:C (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    811428 8fq2:C (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811429 8fq2:D (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811430 8fq2:D (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    811431 8fq2:D (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811432 8fq3:A (3.17) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811433 8fq3:A (3.17) BS02 GLU ? GO:0005216 ... P19491 38409505
    811434 8fq3:A (3.17) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811435 8fq3:B (3.17) BS01 GLU ? GO:0005216 ... P19491 38409505
    811436 8fq3:B (3.17) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811437 8fq3:B (3.17) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811438 8fq3:C (3.17) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811439 8fq3:C (3.17) BS02 GLU ? GO:0005216 ... P19491 38409505
    811440 8fq3:C (3.17) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811441 8fq3:D (3.17) BS01 GLU ? GO:0005216 ... P19491 38409505
    811442 8fq3:D (3.17) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811443 8fq3:D (3.17) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811444 8fq6:A (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811445 8fq6:A (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    811446 8fq6:A (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811447 8fq6:B (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    811448 8fq6:B (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811449 8fq6:B (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811450 8fq6:C (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811451 8fq6:C (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    811452 8fq6:C (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811453 8fq6:D (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    811454 8fq6:D (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811455 8fq6:D (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811456 8fq8:A (3.11) BS01 GLU ? GO:0005216 ... P19491 38409505
    811457 8fq8:A (3.11) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811458 8fq8:A (3.11) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811459 8fq8:B (3.11) BS01 GLU ? GO:0005216 ... P19491 38409505
    811460 8fq8:B (3.11) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811461 8fq8:B (3.11) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811462 8fq8:C (3.11) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811463 8fq8:C (3.11) BS02 GLU ? GO:0005216 ... P19491 38409505
    811464 8fq8:C (3.11) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811465 8fq8:D (3.11) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811466 8fq8:D (3.11) BS02 GLU ? GO:0005216 ... P19491 38409505
    811467 8fq8:D (3.11) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811468 8fq9:A (3.0) BS01 LMO ? GO:0005886 ... P30878 38823641
    811469 8fqa:A (3.35) BS01 GLU ? GO:0005216 ... P19491 38409505
    811470 8fqa:A (3.35) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811471 8fqa:A (3.35) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811472 8fqa:B (3.35) BS01 GLU ? GO:0005216 ... P19491 38409505
    811473 8fqa:B (3.35) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811474 8fqa:B (3.35) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811475 8fqa:C (3.35) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811476 8fqa:C (3.35) BS02 GLU ? GO:0005216 ... P19491 38409505
    811477 8fqa:C (3.35) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811478 8fqa:D (3.35) BS01 GLU ? GO:0005216 ... P19491 38409505
    811479 8fqa:D (3.35) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811480 8fqc:A (3.2) BS01 FE ? GO:0046872 ... A0ACD6BA94 38272938
    811481 8fqd:A (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    811482 8fqd:A (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811483 8fqd:A (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811484 8fqd:B (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    811485 8fqd:B (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811486 8fqd:B (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811487 8fqd:C (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811488 8fqd:C (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    811489 8fqd:C (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811490 8fqd:D (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811491 8fqd:D (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    811492 8fqd:D (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811493 8fqe:A (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    811494 8fqe:A (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811495 8fqe:A (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811496 8fqe:B (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    811497 8fqe:B (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811498 8fqe:C (3.14) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811499 8fqe:C (3.14) BS02 GLU ? GO:0005216 ... P19491 38409505
    811500 8fqe:C (3.14) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811501 8fqe:D (3.14) BS01 GLU ? GO:0005216 ... P19491 38409505
    811502 8fqe:D (3.14) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811503 8fqg:A (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    811504 8fqg:A (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811505 8fqg:A (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811506 8fqg:B (3.01) BS01 GLU ? GO:0005216 ... P19491 38409505
    811507 8fqg:B (3.01) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811508 8fqg:B (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811509 8fqg:C (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811510 8fqg:C (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    811511 8fqg:C (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811512 8fqg:D (3.01) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811513 8fqg:D (3.01) BS02 GLU ? GO:0005216 ... P19491 38409505
    811514 8fqg:D (3.01) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811515 8fqh:A (3.43) BS01 GLU ? GO:0005216 ... P19491 38409505
    811516 8fqh:A (3.43) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811517 8fqh:A (3.43) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811518 8fqh:B (3.43) BS01 GLU ? GO:0005216 ... P19491 38409505
    811519 8fqh:B (3.43) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811520 8fqh:B (3.43) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811521 8fqh:C (3.43) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811522 8fqh:C (3.43) BS02 GLU ? GO:0005216 ... P19491 38409505
    811523 8fqh:C (3.43) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811524 8fqh:D (3.43) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811525 8fqh:D (3.43) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811526 8fqh:D (3.43) BS03 GLU ? GO:0005216 ... P19491 38409505
    811527 8fqj:A (2.9) BS01 Y66 N/A GO:0000122 ... O60341 40175327
    811528 8fqm:A (1.53) BS01 GLY 3.5.2.6 GO:0008800 ... Q6DRA1 37358467
    811529 8fqm:A (1.53) BS02 YDB 3.5.2.6 GO:0008800 ... Q6DRA1 37358467
    811530 8fqm:B (1.53) BS01 YDB 3.5.2.6 GO:0008800 ... Q6DRA1 37358467
    811531 8fqm:C (1.53) BS01 YDB 3.5.2.6 GO:0008800 ... Q6DRA1 37358467
    811532 8fqm:D (1.53) BS01 YDB 3.5.2.6 GO:0008800 ... Q6DRA1 37358467
    811533 8fqn:A (1.256) BS01 GLY 3.5.2.6 GO:0008800 ... A7Y407 37358467
    811534 8fqo:A (1.83) BS01 YDB 3.5.2.6 GO:0008800 ... A7Y407 37358467
    811535 8fqo:B (1.83) BS01 YDB 3.5.2.6 GO:0008800 ... A7Y407 37358467
    811536 8fqp:A (1.419) BS01 GLY 3.5.2.6 GO:0008800 ... A0A2H4PPJ8 37358467
    811537 8fqp:B (1.419) BS01 GLY 3.5.2.6 GO:0008800 ... A0A2H4PPJ8 37358467
    811538 8fqq:A (1.48) BS01 YDB 3.5.2.6 GO:0008800 ... A0A2H4PPJ8 37358467
    811539 8fqq:B (1.48) BS01 GLY 3.5.2.6 GO:0008800 ... A0A2H4PPJ8 37358467
    811540 8fqq:B (1.48) BS02 YDB 3.5.2.6 GO:0008800 ... A0A2H4PPJ8 37358467
    811541 8fqr:B (1.24) BS01 GLY 3.5.2.6 GO:0008800 ... A8QIF8 37358467
    811542 8fqs:B (1.21) BS01 YDB 3.5.2.6 GO:0008800 ... A8QIF8 37358467
    811543 8fqu:A (1.49) BS01 YDB 3.5.2.6 GO:0008800 ... A7Y407 37358467
    811544 8fqu:B (1.49) BS01 YDB 3.5.2.6 GO:0008800 ... A7Y407 37358467
    811545 8fqw:A (1.59) BS01 YDB 3.5.2.6 GO:0008800 ... A7XM81 37358467
    811546 8fqw:B (1.59) BS01 YDB 3.5.2.6 GO:0008800 ... A7XM81 37358467
    811547 8fqx:A (1.496) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811548 8fqx:A (1.496) BS02 N84 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811549 8fqy:A (1.466) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811550 8fqy:A (1.466) BS02 N8A 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811551 8fqz:A (1.467) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811552 8fqz:A (1.467) BS02 N7S 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811553 8fr0:A (3.04) BS01 GLU ? GO:0005216 ... P19491 38409505
    811554 8fr0:A (3.04) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811555 8fr0:A (3.04) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811556 8fr0:B (3.04) BS01 GLU ? GO:0005216 ... P19491 38409505
    811557 8fr0:B (3.04) BS02 CYZ ? GO:0005216 ... P19491 38409505
    811558 8fr0:B (3.04) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811559 8fr0:C (3.04) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811560 8fr0:C (3.04) BS02 GLU ? GO:0005216 ... P19491 38409505
    811561 8fr0:C (3.04) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811562 8fr0:D (3.04) BS01 CYZ ? GO:0005216 ... P19491 38409505
    811563 8fr0:D (3.04) BS02 GLU ? GO:0005216 ... P19491 38409505
    811564 8fr0:D (3.04) BS03 CYZ ? GO:0005216 ... P19491 38409505
    811565 8fr1:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811566 8fr1:A (2.0) BS02 N84 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811567 8fr2:A (1.307) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811568 8fr2:A (1.307) BS02 N8A 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811569 8fr3:A (2.23) BS01 GDP ? GO:0000287 ... P0CE47 37681945
    811570 8fr3:A (2.23) BS02 Y7C ? GO:0000287 ... P0CE47 37681945
    811571 8fr3:B (2.23) BS01 GDP ? GO:0000287 ... P0CE47 37681945
    811572 8fr4:A (1.123) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811573 8fr4:A (1.123) BS02 N7S 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 36677947
    811574 8fr7:A (3.39) BS01 BMA ? GO:0016020 ... Q6Q1S2 37935678
    811575 8fr7:B (3.39) BS01 BMA ? GO:0016020 ... Q6Q1S2 37935678
    811576 8fr7:C (3.39) BS01 BMA ? GO:0016020 ... Q6Q1S2 37935678
    811577 8fr8:0 (2.76) BS01 rna ? GO:0003735 ... A0R7K0 37216503
    811578 8fr8:1 (2.76) BS01 rna ? GO:0003723 ... A0QSG0 37216503
    811579 8fr8:2 (2.76) BS01 rna ? GO:0003735 ... A0R3D2 37216503
    811580 8fr8:2 (2.76) BS02 rna ? GO:0003735 ... A0R3D2 37216503
    811581 8fr8:4 (2.76) BS01 rna ? GO:0003735 ... A0R150 37216503
    811582 8fr8:6 (2.76) BS01 rna ? GO:0003735 ... A0QSD9 37216503
    811583 8fr8:7 (2.76) BS01 rna ? GO:0003735 ... A0QSG7 37216503
    811584 8fr8:7 (2.76) BS02 rna ? GO:0003735 ... A0QSG7 37216503
    811585 8fr8:8 (2.76) BS01 rna ? GO:0003735 ... A0R3I9 37216503
    811586 8fr8:9 (2.76) BS01 rna ? GO:0003735 ... A0R550 37216503
    811587 8fr8:C (2.76) BS01 rna ? GO:0003735 ... A0QV42 37216503
    811588 8fr8:C (2.76) BS02 rna ? GO:0003735 ... A0QV42 37216503
    811589 8fr8:D (2.76) BS01 rna ? GO:0003735 ... A0QSG5 37216503
    811590 8fr8:D (2.76) BS02 rna ? GO:0003735 ... A0QSG5 37216503
    811591 8fr8:F (2.76) BS01 rna ? GO:0003735 ... A0QSL4 37216503
    811592 8fr8:G (2.76) BS01 rna ? GO:0003676 ... A0QSD7 37216503
    811593 8fr8:H (2.76) BS01 rna ? GO:0003735 ... A0R554 37216503
    811594 8fr8:I (2.76) BS01 rna 2.7.6.5 GO:0005886 ... I7FCZ4 37216503
    811595 8fr8:J (2.76) BS01 rna ? GO:0003735 ... A0QSL9 37216503
    811596 8fr8:K (2.76) BS01 rna ? GO:0002181 ... A0QSD4 37216503
    811597 8fr8:L (2.76) BS01 rna ? GO:0003735 ... A0QSD1 37216503
    811598 8fr8:M (2.76) BS01 rna ? GO:0003735 ... A0QSD2 37216503
    811599 8fr8:N (2.76) BS01 rna ? GO:0003735 ... A0QSD8 37216503
    811600 8fr8:N (2.76) BS02 rna ? GO:0003735 ... A0QSD8 37216503

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).