SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    811601 8g34:J (3.2) BS01 rna ? GO:0002181 ... P0AA10 38244547
    811602 8g34:K (3.2) BS01 rna ? GO:0002181 ... P0ADY3 38244547
    811603 8g34:L (3.2) BS01 rna ? GO:0002181 ... P02413 38244547
    811604 8g34:M (3.2) BS01 rna ? GO:0000027 ... P0ADY7 38244547
    811605 8g34:N (3.2) BS01 rna ? GO:0000027 ... P0AG44 38244547
    811606 8g34:O (3.2) BS01 rna ? GO:0002181 ... P0C018 38244547
    811607 8g34:O (3.2) BS02 rna ? GO:0002181 ... P0C018 38244547
    811608 8g34:P (3.2) BS01 rna ? GO:0000027 ... P0A7K6 38244547
    811609 8g34:P (3.2) BS02 rna ? GO:0000027 ... P0A7K6 38244547
    811610 8g34:Q (3.2) BS01 rna ? GO:0000027 ... P0A7L3 38244547
    811611 8g34:R (3.2) BS01 rna ? GO:0002181 ... P0AG48 38244547
    811612 8g34:S (3.2) BS01 rna ? GO:0002181 ... P61175 38244547
    811613 8g34:T (3.2) BS01 rna ? GO:0000027 ... P0ADZ0 38244547
    811614 8g34:U (3.2) BS01 rna ? GO:0000027 ... P60624 38244547
    811615 8g34:V (3.2) BS01 rna ? GO:0000027 ... P68919 38244547
    811616 8g34:V (3.2) BS02 rna ? GO:0000027 ... P68919 38244547
    811617 8g34:W (3.2) BS01 rna ? GO:0000027 ... P0A7L8 38244547
    811618 8g34:W (3.2) BS02 rna ? GO:0000027 ... P0A7L8 38244547
    811619 8g34:X (3.2) BS01 rna ? GO:0000027 ... P0A7M2 38244547
    811620 8g34:Y (3.2) BS01 rna ? GO:0000027 ... P0A7M6 38244547
    811621 8g34:Z (3.2) BS01 rna ? GO:0000027 ... P0AG51 38244547
    811622 8g34:c (3.2) BS01 rna ? GO:0000028 ... P0A7V8 38244547
    811623 8g34:d (3.2) BS01 rna ? GO:0000028 ... P0A7W1 38244547
    811624 8g34:e (3.2) BS01 rna ? GO:0003735 ... P02358 38244547
    811625 8g34:f (3.2) BS01 rna ? GO:0003723 ... P02359 38244547
    811626 8g34:g (3.2) BS01 rna ? GO:0000028 ... P0A7W7 38244547
    811627 8g34:h (3.2) BS01 rna ? GO:0000049 ... P0A7X3 38244547
    811628 8g34:i (3.2) BS01 rna ? GO:0000049 ... P0A7R5 38244547
    811629 8g34:j (3.2) BS01 rna ? GO:0002181 ... P0A7R9 38244547
    811630 8g34:k (3.2) BS01 rna ? GO:0000049 ... P0A7S3 38244547
    811631 8g34:l (3.2) BS01 rna ? GO:0000049 ... P0A7S9 38244547
    811632 8g34:m (3.2) BS01 rna ? GO:0000028 ... P0AG59 38244547
    811633 8g34:n (3.2) BS01 rna ? GO:0000028 ... P0ADZ4 38244547
    811634 8g34:n (3.2) BS02 rna ? GO:0000028 ... P0ADZ4 38244547
    811635 8g34:o (3.2) BS01 rna ? GO:0000028 ... P0A7T3 38244547
    811636 8g34:p (3.2) BS01 rna ? GO:0000028 ... P0AG63 38244547
    811637 8g34:q (3.2) BS01 rna ? GO:0003735 ... P0A7T7 38244547
    811638 8g34:r (3.2) BS01 rna ? GO:0003723 ... P0A7U3 38244547
    811639 8g34:s (3.2) BS01 rna ? GO:0000028 ... P0A7U7 38244547
    811640 8g34:t (3.2) BS01 rna ? GO:0003735 ... P68679 38244547
    811641 8g34:u (3.2) BS01 rna ? GO:0032784 ... P0AFG0 38244547
    811642 8g34:w (3.2) BS01 rna ? GO:0000028 ... P0A7V0 38244547
    811643 8g34:x (3.2) BS01 rna ? GO:0003676 ... P0A7V3 38244547
    811644 8g35:A (2.0) BS01 HEM ? GO:0004497 ... Q2IU02 37042073
    811645 8g35:A (2.0) BS02 YJE ? GO:0004497 ... Q2IU02 37042073
    811646 8g36:A (2.1) BS01 HEM ? GO:0004497 ... Q2IU02 37042073
    811647 8g36:A (2.1) BS02 UB7 ? GO:0004497 ... Q2IU02 37042073
    811648 8g38:0 (3.2) BS01 rna ? GO:0000027 ... P0A7N4 38244547
    811649 8g38:1 (3.2) BS01 rna ? GO:0000027 ... P0A7N9 38244547
    811650 8g38:2 (3.2) BS01 rna ? GO:0002181 ... P0A7P5 38244547
    811651 8g38:3 (3.2) BS01 rna ? GO:0002181 ... P0A7Q1 38244547
    811652 8g38:4 (3.2) BS01 rna ? GO:0002181 ... P0A7Q6 38244547
    811653 8g38:6 (3.2) BS01 rna ? GO:0003924 ... P25519 38244547
    811654 8g38:6 (3.2) BS02 GTP ? GO:0003924 ... P25519 38244547
    811655 8g38:C (3.2) BS01 rna ? GO:0000027 ... P60422 38244547
    811656 8g38:D (3.2) BS01 rna ? GO:0000027 ... P60438 38244547
    811657 8g38:E (3.2) BS01 rna ? GO:0001070 ... P60723 38244547
    811658 8g38:F (3.2) BS01 rna ? GO:0000027 ... P62399 38244547
    811659 8g38:F (3.2) BS02 rna ? GO:0000027 ... P62399 38244547
    811660 8g38:G (3.2) BS01 rna ? GO:0000027 ... P0AG55 38244547
    811661 8g38:J (3.2) BS01 rna ? GO:0002181 ... P0AA10 38244547
    811662 8g38:K (3.2) BS01 rna ? GO:0002181 ... P0ADY3 38244547
    811663 8g38:K (3.2) BS02 rna ? GO:0002181 ... P0ADY3 38244547
    811664 8g38:L (3.2) BS01 rna ? GO:0002181 ... P02413 38244547
    811665 8g38:M (3.2) BS01 rna ? GO:0000027 ... P0ADY7 38244547
    811666 8g38:N (3.2) BS01 rna ? GO:0000027 ... P0AG44 38244547
    811667 8g38:O (3.2) BS01 rna ? GO:0002181 ... P0C018 38244547
    811668 8g38:O (3.2) BS02 rna ? GO:0002181 ... P0C018 38244547
    811669 8g38:P (3.2) BS01 rna ? GO:0000027 ... P0A7K6 38244547
    811670 8g38:P (3.2) BS02 rna ? GO:0000027 ... P0A7K6 38244547
    811671 8g38:Q (3.2) BS01 rna ? GO:0000027 ... P0A7L3 38244547
    811672 8g38:R (3.2) BS01 rna ? GO:0002181 ... P0AG48 38244547
    811673 8g38:S (3.2) BS01 rna ? GO:0002181 ... P61175 38244547
    811674 8g38:T (3.2) BS01 rna ? GO:0000027 ... P0ADZ0 38244547
    811675 8g38:U (3.2) BS01 rna ? GO:0000027 ... P60624 38244547
    811676 8g38:V (3.2) BS01 rna ? GO:0000027 ... P68919 38244547
    811677 8g38:V (3.2) BS02 rna ? GO:0000027 ... P68919 38244547
    811678 8g38:W (3.2) BS01 rna ? GO:0000027 ... P0A7L8 38244547
    811679 8g38:W (3.2) BS02 rna ? GO:0000027 ... P0A7L8 38244547
    811680 8g38:X (3.2) BS01 rna ? GO:0000027 ... P0A7M2 38244547
    811681 8g38:Y (3.2) BS01 rna ? GO:0000027 ... P0A7M6 38244547
    811682 8g38:Z (3.2) BS01 rna ? GO:0000027 ... P0AG51 38244547
    811683 8g38:c (3.2) BS01 rna ? GO:0000028 ... P0A7V8 38244547
    811684 8g38:d (3.2) BS01 rna ? GO:0000028 ... P0A7W1 38244547
    811685 8g38:e (3.2) BS01 rna ? GO:0003735 ... P02358 38244547
    811686 8g38:f (3.2) BS01 rna ? GO:0003723 ... P02359 38244547
    811687 8g38:g (3.2) BS01 rna ? GO:0000028 ... P0A7W7 38244547
    811688 8g38:h (3.2) BS01 rna ? GO:0000049 ... P0A7X3 38244547
    811689 8g38:i (3.2) BS01 rna ? GO:0000049 ... P0A7R5 38244547
    811690 8g38:j (3.2) BS01 rna ? GO:0002181 ... P0A7R9 38244547
    811691 8g38:k (3.2) BS01 rna ? GO:0000049 ... P0A7S3 38244547
    811692 8g38:l (3.2) BS01 rna ? GO:0000049 ... P0A7S9 38244547
    811693 8g38:m (3.2) BS01 rna ? GO:0000028 ... P0AG59 38244547
    811694 8g38:n (3.2) BS01 rna ? GO:0000028 ... P0ADZ4 38244547
    811695 8g38:n (3.2) BS02 rna ? GO:0000028 ... P0ADZ4 38244547
    811696 8g38:o (3.2) BS01 rna ? GO:0000028 ... P0A7T3 38244547
    811697 8g38:p (3.2) BS01 rna ? GO:0000028 ... P0AG63 38244547
    811698 8g38:q (3.2) BS01 rna ? GO:0003735 ... P0A7T7 38244547
    811699 8g38:r (3.2) BS01 rna ? GO:0003723 ... P0A7U3 38244547
    811700 8g38:r (3.2) BS02 rna ? GO:0003723 ... P0A7U3 38244547
    811701 8g38:s (3.2) BS01 rna ? GO:0000028 ... P0A7U7 38244547
    811702 8g38:t (3.2) BS01 rna ? GO:0003735 ... P68679 38244547
    811703 8g38:w (3.2) BS01 rna ? GO:0000028 ... P0A7V0 38244547
    811704 8g38:x (3.2) BS01 rna ? GO:0003676 ... P0A7V3 38244547
    811705 8g39:A (1.42) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 N/A
    811706 8g39:A (1.42) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 N/A
    811707 8g39:A (1.42) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 N/A
    811708 8g39:A (1.42) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 N/A
    811709 8g39:B (1.42) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 N/A
    811710 8g39:B (1.42) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 N/A
    811711 8g39:B (1.42) BS03 NAI 1.1.1.1 GO:0004022 ... P00327 N/A
    811712 8g39:B (1.42) BS04 CXF 1.1.1.1 GO:0004022 ... P00327 N/A
    811713 8g3a:A (3.4) BS01 6OU ? GO:0005886 ... O34741 37393310
    811714 8g3a:A (3.4) BS02 6OU ? GO:0005886 ... O34741 37393310
    811715 8g3b:A (3.5) BS01 6OU ? GO:0005886 ... O34741 37393310
    811716 8g3b:E (3.5) BS01 6OU 2.7.13.3 GO:0000155 ... O35044 37393310
    811717 8g3c:A (1.8) BS01 YJN ? GO:0000122 ... P61964 37307526
    811718 8g3d:AA (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811719 8g3d:AB (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811720 8g3d:AC (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811721 8g3d:AD (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811722 8g3d:AE (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811723 8g3d:AF (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811724 8g3d:AG (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811725 8g3d:AH (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811726 8g3d:AI (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811727 8g3d:AJ (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811728 8g3d:AK (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811729 8g3d:AL (3.7) BS01 GTP ? GO:0003924 ... P41352 37061538
    811730 8g3d:AL (3.7) BS02 GDP ? GO:0003924 ... P41352 37061538
    811731 8g3d:AM (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811732 8g3d:AN (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811733 8g3d:BA (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811734 8g3d:BB (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811735 8g3d:BC (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811736 8g3d:BD (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811737 8g3d:BE (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811738 8g3d:BF (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811739 8g3d:BG (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811740 8g3d:BH (3.7) BS01 GTP ? GO:0003924 ... P41352 37061538
    811741 8g3d:BH (3.7) BS02 GDP ? GO:0003924 ... P41352 37061538
    811742 8g3d:BI (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811743 8g3d:BJ (3.7) BS01 GTP ? GO:0003924 ... P41352 37061538
    811744 8g3d:BJ (3.7) BS02 GDP ? GO:0003924 ... P41352 37061538
    811745 8g3d:BK (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811746 8g3d:BL (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811747 8g3d:BM (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811748 8g3d:BN (3.7) BS01 GTP ? GO:0003924 ... P41352 37061538
    811749 8g3d:BN (3.7) BS02 GDP ? GO:0003924 ... P41352 37061538
    811750 8g3d:CA (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811751 8g3d:CB (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811752 8g3d:CC (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811753 8g3d:CC (3.7) BS02 MG 3.6.5.- GO:0005200 ... P41351 37061538
    811754 8g3d:CD (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811755 8g3d:CE (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811756 8g3d:CE (3.7) BS02 MG 3.6.5.- GO:0005200 ... P41351 37061538
    811757 8g3d:CF (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811758 8g3d:CG (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811759 8g3d:CH (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811760 8g3d:CI (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811761 8g3d:CI (3.7) BS02 MG 3.6.5.- GO:0005200 ... P41351 37061538
    811762 8g3d:CJ (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811763 8g3d:CK (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811764 8g3d:CL (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811765 8g3d:CL (3.7) BS02 GTP ? GO:0003924 ... P41352 37061538
    811766 8g3d:CM (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811767 8g3d:CN (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811768 8g3d:DA (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811769 8g3d:DB (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811770 8g3d:DC (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811771 8g3d:DD (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811772 8g3d:DE (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811773 8g3d:DE (3.7) BS02 MG 3.6.5.- GO:0005200 ... P41351 37061538
    811774 8g3d:DF (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811775 8g3d:DG (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811776 8g3d:DH (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811777 8g3d:DI (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811778 8g3d:DI (3.7) BS02 MG 3.6.5.- GO:0005200 ... P41351 37061538
    811779 8g3d:DJ (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811780 8g3d:DK (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811781 8g3d:DL (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811782 8g3d:DM (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811783 8g3d:DN (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811784 8g3d:EA (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811785 8g3d:EB (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811786 8g3d:EC (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811787 8g3d:ED (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811788 8g3d:EE (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811789 8g3d:EF (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811790 8g3d:EG (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811791 8g3d:EH (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811792 8g3d:EI (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811793 8g3d:EJ (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811794 8g3d:EK (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811795 8g3d:EL (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811796 8g3d:EM (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811797 8g3d:EN (3.7) BS01 GDP ? GO:0003924 ... P41352 37061538
    811798 8g3d:FA (3.7) BS01 GTP 3.6.5.- GO:0005200 ... P41351 37061538
    811799 8g3d:FB (3.7) BS01 GTP ? GO:0003924 ... P41352 37061538
    811800 8g3d:FB (3.7) BS02 GDP ? GO:0003924 ... P41352 37061538

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).