SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    81001 2ebs:A (2.4) BS01 BGC 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81002 2ebs:A (2.4) BS02 BGC 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81003 2ebs:A (2.4) BS03 BGC 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81004 2ebs:A (2.4) BS04 XYS 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81005 2ebs:A (2.4) BS05 XYS 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81006 2ebs:B (2.4) BS01 BGC 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81007 2ebs:B (2.4) BS02 BGC 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81008 2ebs:B (2.4) BS03 BGC 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81009 2ebs:B (2.4) BS04 XYS 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81010 2ebs:B (2.4) BS05 XYS 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81011 2ebs:B (2.4) BS06 XYS 3.2.1.150 GO:0010411 ... Q8J0D2 17498741
    81012 2ebt:A (-1.00) BS01 ZN ? N/A Q13887 N/A
    81013 2ebt:A (-1.00) BS02 ZN ? N/A Q13887 N/A
    81014 2ebt:A (-1.00) BS03 ZN ? N/A Q13887 N/A
    81015 2ebv:A (-1.00) BS01 ZN ? N/A P49790 N/A
    81016 2ec0:A (2.75) BS01 rna 3.4.22.46
    3.6.1.15
    GO:0003723 ... Q9QCE4 17517631
    81017 2ec0:A (2.75) BS02 rna 3.4.22.46
    3.6.1.15
    GO:0003723 ... Q9QCE4 17517631
    81018 2ec0:A (2.75) BS03 MG 3.4.22.46
    3.6.1.15
    GO:0003723 ... Q9QCE4 17517631
    81019 2ec0:D (2.75) BS01 rna 3.4.22.46
    3.6.1.15
    GO:0003723 ... Q9QCE4 17517631
    81020 2ec0:D (2.75) BS02 rna 3.4.22.46
    3.6.1.15
    GO:0003723 ... Q9QCE4 17517631
    81021 2ec6:C (3.25) BS01 CA ? GO:0005509 ... Q26066 17502101
    81022 2ec7:A (-1.00) BS01 ZN ? GO:0003676 ... P18041 19334676
    81023 2ec7:A (-1.00) BS02 ZN ? GO:0003676 ... P18041 19334676
    81024 2ec9:H (2.0) BS01 CA 3.4.21.21 GO:0004252 ... P08709 17505107
    81025 2ec9:H (2.0) BS02 24X 3.4.21.21 GO:0004252 ... P08709 17505107 MOAD: ic50=0.0043uM
    81026 2ec9:L (2.0) BS01 ASO 3.4.21.21 GO:0005509 ... P08709 17505107
    81027 2ec9:L (2.0) BS02 FUC 3.4.21.21 GO:0005509 ... P08709 17505107
    81028 2ec9:L (2.0) BS03 CA 3.4.21.21 GO:0005509 ... P08709 17505107
    81029 2ec9:L (2.0) BS04 CA 3.4.21.21 GO:0005509 ... P08709 17505107
    81030 2ec9:L (2.0) BS05 CA 3.4.21.21 GO:0005509 ... P08709 17505107
    81031 2ec9:L (2.0) BS06 CA 3.4.21.21 GO:0005509 ... P08709 17505107
    81032 2ecg:A (-1.00) BS01 ZN 2.3.2.27 N/A P98170 N/A
    81033 2ecg:A (-1.00) BS02 ZN 2.3.2.27 N/A P98170 N/A
    81034 2eci:A (-1.00) BS01 ZN 2.3.2.27 GO:0004842 ... Q9Y4K3 N/A
    81035 2eci:A (-1.00) BS02 ZN 2.3.2.27 GO:0004842 ... Q9Y4K3 N/A
    81036 2ecj:A (-1.00) BS01 ZN 2.3.2.27 N/A Q9HCM9 N/A
    81037 2ecj:A (-1.00) BS02 ZN 2.3.2.27 N/A Q9HCM9 N/A
    81038 2eck:A (2.8) BS01 AMP 2.7.4.3 GO:0000287 ... P69441 16302237
    81039 2eck:A (2.8) BS02 ADP 2.7.4.3 GO:0000287 ... P69441 16302237
    81040 2eck:B (2.8) BS01 AMP 2.7.4.3 GO:0000287 ... P69441 16302237
    81041 2eck:B (2.8) BS02 ADP 2.7.4.3 GO:0000287 ... P69441 16302237
    81042 2ecl:A (-1.00) BS01 ZN ? GO:0008270 ... Q9UBF6 N/A
    81043 2ecl:A (-1.00) BS02 ZN ? GO:0008270 ... Q9UBF6 N/A
    81044 2ecl:A (-1.00) BS03 ZN ? GO:0008270 ... Q9UBF6 N/A
    81045 2ecm:A (-1.00) BS01 ZN 2.3.2.27 N/A Q9CR50 N/A
    81046 2ecm:A (-1.00) BS02 ZN 2.3.2.27 N/A Q9CR50 N/A
    81047 2ecn:A (-1.00) BS01 ZN ? N/A Q8WVD5 N/A
    81048 2ecn:A (-1.00) BS02 ZN ? N/A Q8WVD5 N/A
    81049 2eco:A (1.9) BS01 PLP 2.5.1.47 GO:0003824 ... Q5SLE6 N/A
    81050 2eco:A (1.9) BS02 4MV 2.5.1.47 GO:0003824 ... Q5SLE6 N/A
    81051 2ecp:A (2.95) BS01 AC1 2.4.1.1 GO:0004645 ... P00490 10220320
    81052 2ecp:A (2.95) BS02 GOL 2.4.1.1 GO:0004645 ... P00490 10220320
    81053 2ecp:A (2.95) BS03 PLP 2.4.1.1 GO:0004645 ... P00490 10220320
    81054 2ecp:B (2.95) BS01 AC1 2.4.1.1 GO:0004645 ... P00490 10220320
    81055 2ecp:B (2.95) BS02 GOL 2.4.1.1 GO:0004645 ... P00490 10220320
    81056 2ecp:B (2.95) BS03 PLP 2.4.1.1 GO:0004645 ... P00490 10220320
    81057 2ecq:A (1.9) BS01 PLP 2.5.1.47 GO:0003824 ... Q5SLE6 N/A
    81058 2ecq:A (1.9) BS02 3HL 2.5.1.47 GO:0003824 ... Q5SLE6 N/A
    81059 2ect:A (-1.00) BS01 ZN 2.3.2.27 N/A Q91YL2 N/A
    81060 2ect:A (-1.00) BS02 ZN 2.3.2.27 N/A Q91YL2 N/A
    81061 2ecv:A (-1.00) BS01 ZN 2.3.2.27 N/A Q9C035 N/A
    81062 2ecv:A (-1.00) BS02 ZN 2.3.2.27 N/A Q9C035 N/A
    81063 2ecw:A (-1.00) BS01 ZN ? N/A P15533 N/A
    81064 2ecw:A (-1.00) BS02 ZN ? N/A P15533 N/A
    81065 2ecy:A (-1.00) BS01 ZN 2.3.2.27 N/A Q13114 N/A
    81066 2ecy:A (-1.00) BS02 ZN 2.3.2.27 N/A Q13114 N/A
    81067 2ed3:A (2.5) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81068 2ed4:A (1.85) BS01 FAD 1.5.1.36 GO:0006208 ... Q5SJP7 17729270
    81069 2ed4:A (1.85) BS02 NAD 1.5.1.36 GO:0006208 ... Q5SJP7 17729270
    81070 2ed4:B (1.85) BS01 FAD 1.5.1.36 GO:0006208 ... Q5SJP7 17729270
    81071 2ed4:B (1.85) BS02 NAD 1.5.1.36 GO:0006208 ... Q5SJP7 17729270
    81072 2ed5:A (2.1) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81073 2eda:A (2.19) BS01 IOD 3.8.1.5 GO:0003824 ... P22643 8369276
    81074 2edc:A (2.3) BS01 IOD 3.8.1.5 GO:0003824 ... P22643 8369276
    81075 2ee8:A (-1.00) BS01 ZN ? N/A Q91ZD1 N/A
    81076 2ee8:A (-1.00) BS02 ZN ? N/A Q91ZD1 N/A
    81077 2ee8:A (-1.00) BS03 ZN ? N/A Q91ZD1 N/A
    81078 2eek:A (1.85) BS01 CA 3.4.21.4 GO:0004252 ... P16049 N/A
    81079 2eeo:B (1.6) BS01 peptide 4.1.1.11 GO:0004068 ... Q5SKN7 N/A
    81080 2eeo:B (1.6) BS02 PYR 4.1.1.11 GO:0004068 ... Q5SKN7 N/A
    81081 2eeo:B (1.6) BS03 FUM 4.1.1.11 GO:0004068 ... Q5SKN7 N/A
    81082 2eep:A (2.2) BS01 AIO 3.4.14.12 GO:0006508 ... Q7MUW6 18042490
    81083 2eeq:A (2.5) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81084 2eer:A (2.1) BS01 ZN 1.1.1.1 GO:0004022 ... Q96XE0 N/A
    81085 2eer:A (2.1) BS02 NAD 1.1.1.1 GO:0004022 ... Q96XE0 N/A
    81086 2eer:B (2.1) BS01 ZN 1.1.1.1 GO:0004022 ... Q96XE0 N/A
    81087 2eer:B (2.1) BS02 NAD 1.1.1.1 GO:0004022 ... Q96XE0 N/A
    81088 2eex:A (2.0) BS01 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81089 2eex:A (2.0) BS02 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81090 2eex:A (2.0) BS03 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81091 2eex:A (2.0) BS04 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81092 2eex:A (2.0) BS05 ZN 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81093 2eex:A (2.0) BS06 CA 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81094 2ef2:A (1.8) BS01 RHX 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    81095 2ef5:A (2.0) BS01 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81096 2ef5:A (2.0) BS02 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81097 2ef5:A (2.0) BS03 LYS 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81098 2ef5:B (2.0) BS01 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81099 2ef5:B (2.0) BS02 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81100 2ef5:D (2.0) BS01 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81101 2ef5:D (2.0) BS02 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81102 2ef5:D (2.0) BS03 LYS 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81103 2ef5:E (2.0) BS01 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81104 2ef5:E (2.0) BS02 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81105 2ef5:E (2.0) BS03 LYS 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81106 2ef5:F (2.0) BS01 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81107 2ef5:F (2.0) BS02 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81108 2ef5:F (2.0) BS03 LYS 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81109 2ef5:G (2.0) BS01 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81110 2ef5:G (2.0) BS02 MN 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81111 2ef5:G (2.0) BS03 LYS 3.5.3.1 GO:0000050 ... Q5SI78 N/A
    81112 2ef6:A (2.1) BS01 MMA ? GO:0030246 ... P14894 17881248
    81113 2ef6:A (2.1) BS02 MAN ? GO:0030246 ... P14894 17881248
    81114 2ef6:A (2.1) BS03 CA ? GO:0030246 ... P14894 17881248
    81115 2ef6:A (2.1) BS04 MN ? GO:0030246 ... P14894 17881248
    81116 2ef6:B (2.1) BS01 MMA ? GO:0030246 ... P14894 17881248
    81117 2ef6:B (2.1) BS02 MAN ? GO:0030246 ... P14894 17881248
    81118 2ef6:B (2.1) BS03 CA ? GO:0030246 ... P14894 17881248
    81119 2ef6:B (2.1) BS04 MN ? GO:0030246 ... P14894 17881248
    81120 2ef6:C (2.1) BS01 MMA ? GO:0030246 ... P14894 17881248
    81121 2ef6:C (2.1) BS02 MAN ? GO:0030246 ... P14894 17881248
    81122 2ef6:C (2.1) BS03 CA ? GO:0030246 ... P14894 17881248
    81123 2ef6:C (2.1) BS04 MN ? GO:0030246 ... P14894 17881248
    81124 2ef6:D (2.1) BS01 MMA ? GO:0030246 ... P14894 17881248
    81125 2ef6:D (2.1) BS02 MAN ? GO:0030246 ... P14894 17881248
    81126 2ef6:D (2.1) BS03 CA ? GO:0030246 ... P14894 17881248
    81127 2ef6:D (2.1) BS04 MN ? GO:0030246 ... P14894 17881248
    81128 2ef9:A (2.0) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 17381075
    81129 2ef9:A (2.0) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=14.18uM
    81130 2ef9:B (2.0) BS01 PEP 2.5.1.55 GO:0005737 ... O66496 17381075
    81131 2ef9:B (2.0) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=14.18uM
    81132 2efa:B (2.7) BS01 peptide ? N/A P01315 N/A
    81133 2efb:A (2.94) BS01 CA 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    81134 2efb:A (2.94) BS02 HEM 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    81135 2efb:B (2.94) BS01 CO3 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    81136 2efb:B (2.94) BS02 CA 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    81137 2efb:B (2.94) BS03 HEM 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    81138 2efc:B (2.09) BS01 GDP ? GO:0003924 ... Q9SN68 20833725
    81139 2efc:D (2.09) BS01 GDP ? GO:0003924 ... Q9SN68 20833725
    81140 2efe:A (2.08) BS01 GNH ? GO:0005085 ... Q9LT31 20833725
    81141 2efe:B (2.08) BS01 GNH ? GO:0003924 ... Q9SN68 20833725
    81142 2efe:C (2.08) BS01 GNH ? GO:0005085 ... Q9LT31 20833725
    81143 2efe:D (2.08) BS01 GNH ? GO:0003924 ... Q9SN68 20833725
    81144 2eff:A (1.8) BS01 CO ? GO:0005506 ... P27838 17651435
    81145 2efg:A (2.6) BS01 GDP ? GO:0003746 ... Q5SHN5 8070396
    81146 2efh:B (2.1) BS01 GDP ? GO:0003924 ... Q9SN68 20833725
    81147 2efh:D (2.1) BS01 GDP ? GO:0003924 ... Q9SN68 20833725
    81148 2efj:A (2.0) BS01 SAH 2.1.1.160 GO:0008168 ... A4GE70 17434991
    81149 2efj:A (2.0) BS02 37T 2.1.1.160 GO:0008168 ... A4GE70 17434991
    81150 2efp:A (2.2) BS01 GLN ? GO:0005829 ... F9VNT4 18653535
    81151 2efp:A (2.2) BS02 GLN ? GO:0005829 ... F9VNT4 18653535
    81152 2efq:A (2.3) BS01 GLN ? GO:0005829 ... F9VNT4 18653535
    81153 2eft:A (2.0) BS01 COA 2.3.1.180 GO:0004315 ... P0A6R0 17524982
    81154 2eft:B (2.0) BS01 MEE 2.3.1.180 GO:0004315 ... P0A6R0 17524982
    81155 2efu:A (2.3) BS01 PHE ? N/A Q9LCC8 18323628
    81156 2efu:B (2.3) BS01 PHE ? N/A Q9LCC8 18323628
    81157 2efu:C (2.3) BS01 PHE ? N/A Q9LCC8 18323628
    81158 2efu:D (2.3) BS01 PHE ? N/A Q9LCC8 18323628
    81159 2efu:E (2.3) BS01 PHE ? N/A Q9LCC8 18323628
    81160 2efu:F (2.3) BS01 PHE ? N/A Q9LCC8 18323628
    81161 2efw:A (2.5) BS01 dna ? GO:0003677 ... P0CI76 17521668
    81162 2efw:A (2.5) BS02 dna ? GO:0003677 ... P0CI76 17521668
    81163 2efw:B (2.5) BS01 dna ? GO:0003677 ... P0CI76 17521668
    81164 2efw:B (2.5) BS02 dna ? GO:0003677 ... P0CI76 17521668
    81165 2efw:F (2.5) BS01 dna ? GO:0003677 ... P0CI76 17521668
    81166 2efw:F (2.5) BS02 dna ? GO:0003677 ... P0CI76 17521668
    81167 2efw:G (2.5) BS01 dna ? GO:0003677 ... P0CI76 17521668
    81168 2efw:G (2.5) BS02 dna ? GO:0003677 ... P0CI76 17521668
    81169 2efx:A (2.2) BS01 NFA ? N/A Q9LCC8 18323628
    81170 2efx:B (2.2) BS01 NFA ? N/A Q9LCC8 18323628
    81171 2efx:C (2.2) BS01 NFA ? N/A Q9LCC8 18323628
    81172 2efx:D (2.2) BS01 NFA ? N/A Q9LCC8 18323628
    81173 2efx:E (2.2) BS01 NFA ? N/A Q9LCC8 18323628
    81174 2efx:F (2.2) BS01 NFA ? N/A Q9LCC8 18323628
    81175 2efy:A (2.35) BS01 PLP 2.5.1.47 GO:0003824 ... Q5SLE6 N/A
    81176 2efy:A (2.35) BS02 4AT 2.5.1.47 GO:0003824 ... Q5SLE6 N/A
    81177 2efy:B (2.35) BS01 PLP 2.5.1.47 GO:0003824 ... Q5SLE6 N/A
    81178 2efy:B (2.35) BS02 4AT 2.5.1.47 GO:0003824 ... Q5SLE6 N/A
    81179 2eg2:A (1.72) BS01 ATP ? GO:0005524 ... O66513 N/A
    81180 2eg3:A (1.8) BS01 ZN 2.8.1.- GO:0004792 ... Q5SHV8 N/A
    81181 2eg3:B (1.8) BS01 ZN 2.8.1.- GO:0004792 ... Q5SHV8 N/A
    81182 2eg4:A (1.7) BS01 ZN 2.8.1.- GO:0004792 ... Q5SHV8 N/A
    81183 2eg4:B (1.7) BS01 ZN 2.8.1.- GO:0004792 ... Q5SHV8 N/A
    81184 2eg5:A (2.2) BS01 SAH 2.1.1.158 GO:0008168 ... A4GE69 17434991
    81185 2eg5:A (2.2) BS02 XTS 2.1.1.158 GO:0008168 ... A4GE69 17434991
    81186 2eg5:C (2.2) BS01 SAH 2.1.1.158 GO:0008168 ... A4GE69 17434991
    81187 2eg5:C (2.2) BS02 XTS 2.1.1.158 GO:0008168 ... A4GE69 17434991
    81188 2eg5:E (2.2) BS01 SAH 2.1.1.158 GO:0008168 ... A4GE69 17434991
    81189 2eg5:E (2.2) BS02 XTS 2.1.1.158 GO:0008168 ... A4GE69 17434991
    81190 2eg5:G (2.2) BS01 SAH 2.1.1.158 GO:0008168 ... A4GE69 17434991
    81191 2eg5:G (2.2) BS02 XTS 2.1.1.158 GO:0008168 ... A4GE69 17434991
    81192 2eg6:A (1.7) BS01 ZN 3.5.2.3 GO:0004151 ... P05020 17550785
    81193 2eg6:A (1.7) BS02 ZN 3.5.2.3 GO:0004151 ... P05020 17550785
    81194 2eg6:B (1.7) BS01 ZN 3.5.2.3 GO:0004151 ... P05020 17550785
    81195 2eg6:B (1.7) BS02 ZN 3.5.2.3 GO:0004151 ... P05020 17550785
    81196 2eg7:A (2.0) BS01 ZN 3.5.2.3 GO:0004151 ... P05020 17550785
    81197 2eg7:A (2.0) BS02 ZN 3.5.2.3 GO:0004151 ... P05020 17550785
    81198 2eg7:A (2.0) BS03 OTD 3.5.2.3 GO:0004151 ... P05020 17550785 MOAD: Ki=1.3uM
    81199 2eg7:B (2.0) BS01 ZN 3.5.2.3 GO:0004151 ... P05020 17550785
    81200 2eg7:B (2.0) BS02 ZN 3.5.2.3 GO:0004151 ... P05020 17550785

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).