SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    812601 8fxd:B (1.58) BS01 MN ? GO:0016491 ... Q3JK21 40501712
    812602 8fxd:B (1.58) BS02 MN ? GO:0016491 ... Q3JK21 40501712
    812603 8fxd:M (1.58) BS01 MN ? GO:0016491 ... Q3JK21 40501712
    812604 8fxd:M (1.58) BS02 MN ? GO:0016491 ... Q3JK21 40501712
    812605 8fxd:S (1.58) BS01 MN ? GO:0016491 ... Q3JK21 40501712
    812606 8fxd:S (1.58) BS02 MN ? GO:0016491 ... Q3JK21 40501712
    812607 8fxd:Y (1.58) BS01 MN ? GO:0016491 ... Q3JK21 40501712
    812608 8fxd:Y (1.58) BS02 MN ? GO:0016491 ... Q3JK21 40501712
    812609 8fxe:A (1.55) BS01 YID 2.3.1.-
    2.3.1.48
    N/A Q92793 38664416
    812610 8fxi:C (2.7) BS01 peptide ? GO:0000166 ... A0ACD6B9D7 37222490
    812611 8fxi:C (2.7) BS02 peptide ? GO:0000166 ... A0ACD6B9D7 37222490
    812612 8fxi:C (2.7) BS03 YHZ ? GO:0000166 ... A0ACD6B9D7 37222490
    812613 8fxi:D (2.7) BS01 peptide ? GO:0000166 ... A0ACD6B9D7 37222490
    812614 8fxi:D (2.7) BS02 peptide ? GO:0000166 ... A0ACD6B9D7 37222490
    812615 8fxi:D (2.7) BS03 ACP ? GO:0000166 ... A0ACD6B9D7 37222490
    812616 8fxn:A (2.0) BS01 YN0 2.3.1.-
    2.3.1.48
    N/A Q92793 N/A
    812617 8fxo:A (1.74) BS01 YN5 2.3.1.-
    2.3.1.48
    N/A Q92793 38664416
    812618 8fxp:0G (4.04) BS01 peptide ? N/A N/A 37684529
    812619 8fxp:0H (4.04) BS01 peptide ? N/A N/A 37684529
    812620 8fxp:1 (4.04) BS01 peptide ? N/A N/A 37684529
    812621 8fxp:1 (4.04) BS02 peptide ? N/A N/A 37684529
    812622 8fxp:2 (4.04) BS01 peptide ? N/A N/A 37684529
    812623 8fxp:3 (4.04) BS01 peptide ? N/A N/A 37684529
    812624 8fxp:5 (4.04) BS01 peptide ? N/A N/A 37684529
    812625 8fxp:7 (4.04) BS01 peptide ? N/A N/A 37684529
    812626 8fxp:9 (4.04) BS01 peptide ? N/A N/A 37684529
    812627 8fxp:AA (4.04) BS01 peptide ? N/A N/A 37684529
    812628 8fxp:AA (4.04) BS02 peptide ? N/A N/A 37684529
    812629 8fxp:AB (4.04) BS01 peptide ? N/A N/A 37684529
    812630 8fxp:AB (4.04) BS02 peptide ? N/A N/A 37684529
    812631 8fxp:AC (4.04) BS01 peptide ? N/A N/A 37684529
    812632 8fxp:AC (4.04) BS02 peptide ? N/A N/A 37684529
    812633 8fxp:AD (4.04) BS01 peptide ? N/A N/A 37684529
    812634 8fxp:AE (4.04) BS01 peptide ? N/A N/A 37684529
    812635 8fxp:AF (4.04) BS01 peptide ? N/A N/A 37684529
    812636 8fxp:AF (4.04) BS02 peptide ? N/A N/A 37684529
    812637 8fxp:AG (4.04) BS01 peptide ? N/A N/A 37684529
    812638 8fxp:AG (4.04) BS02 peptide ? N/A N/A 37684529
    812639 8fxp:AH (4.04) BS01 peptide ? N/A N/A 37684529
    812640 8fxp:AI (4.04) BS01 peptide ? N/A N/A 37684529
    812641 8fxp:AJ (4.04) BS01 peptide ? N/A N/A 37684529
    812642 8fxp:AJ (4.04) BS02 peptide ? N/A N/A 37684529
    812643 8fxp:AJ (4.04) BS03 peptide ? N/A N/A 37684529
    812644 8fxp:AK (4.04) BS01 peptide ? N/A N/A 37684529
    812645 8fxp:AL (4.04) BS01 peptide ? N/A N/A 37684529
    812646 8fxp:AM (4.04) BS01 peptide ? N/A N/A 37684529
    812647 8fxp:AN (4.04) BS01 peptide ? N/A N/A 37684529
    812648 8fxp:c (4.04) BS01 peptide N/A N/A N/A 37684529
    812649 8fxp:d (4.04) BS01 peptide N/A N/A N/A 37684529
    812650 8fxp:g (4.04) BS01 peptide ? N/A N/A 37684529
    812651 8fxp:h (4.04) BS01 peptide ? N/A N/A 37684529
    812652 8fxp:i (4.04) BS01 peptide ? N/A N/A 37684529
    812653 8fxp:i (4.04) BS02 peptide ? N/A N/A 37684529
    812654 8fxp:j (4.04) BS01 peptide ? N/A N/A 37684529
    812655 8fxp:j (4.04) BS02 peptide ? N/A N/A 37684529
    812656 8fxp:k (4.04) BS01 peptide ? N/A N/A 37684529
    812657 8fxp:k (4.04) BS02 peptide ? N/A N/A 37684529
    812658 8fxp:l (4.04) BS01 peptide ? N/A N/A 37684529
    812659 8fxp:m (4.04) BS01 peptide ? N/A N/A 37684529
    812660 8fxp:n (4.04) BS01 peptide ? N/A N/A 37684529
    812661 8fxp:o (4.04) BS01 peptide ? N/A N/A 37684529
    812662 8fxp:r (4.04) BS01 peptide ? N/A N/A 37684529
    812663 8fxp:r (4.04) BS02 peptide ? N/A N/A 37684529
    812664 8fxp:s (4.04) BS01 peptide ? N/A N/A 37684529
    812665 8fxp:s (4.04) BS02 peptide ? N/A N/A 37684529
    812666 8fxp:t (4.04) BS01 peptide ? N/A N/A 37684529
    812667 8fxp:t (4.04) BS02 peptide ? N/A N/A 37684529
    812668 8fxp:u (4.04) BS01 peptide ? N/A N/A 37684529
    812669 8fxp:v (4.04) BS01 peptide ? N/A N/A 37684529
    812670 8fxp:w (4.04) BS01 peptide ? N/A N/A 37684529
    812671 8fxp:w (4.04) BS02 peptide ? N/A N/A 37684529
    812672 8fxp:x (4.04) BS01 peptide ? N/A N/A 37684529
    812673 8fxp:x (4.04) BS02 peptide ? N/A N/A 37684529
    812674 8fxp:y (4.04) BS01 peptide ? N/A N/A 37684529
    812675 8fxp:y (4.04) BS02 peptide ? N/A N/A 37684529
    812676 8fxp:z (4.04) BS01 peptide ? N/A N/A 37684529
    812677 8fxp:z (4.04) BS02 peptide ? N/A N/A 37684529
    812678 8fxq:A (1.21) BS01 peptide 3.4.23.21 GO:0004190 ... P06026 11463303
    812679 8fxq:B (1.21) BS01 peptide 3.4.23.21 GO:0004190 ... P06026 11463303
    812680 8fxr:c (4.5) BS01 peptide N/A N/A N/A 37684529
    812681 8fxr:d (4.5) BS01 peptide N/A N/A N/A 37684529
    812682 8fxr:d1 (4.5) BS01 peptide N/A N/A N/A 37684529
    812683 8fxr:d2 (4.5) BS01 peptide N/A N/A N/A 37684529
    812684 8fxr:d5 (4.5) BS01 peptide N/A N/A N/A 37684529
    812685 8fxr:d6 (4.5) BS01 peptide N/A N/A N/A 37684529
    812686 8fxr:d7 (4.5) BS01 peptide N/A N/A N/A 37684529
    812687 8fxr:e (4.5) BS01 peptide N/A N/A N/A 37684529
    812688 8fxr:f (4.5) BS01 peptide N/A N/A N/A 37684529
    812689 8fxr:g (4.5) BS01 peptide N/A N/A N/A 37684529
    812690 8fxr:g1 (4.5) BS01 peptide ? N/A N/A 37684529
    812691 8fxr:g2 (4.5) BS01 peptide ? N/A N/A 37684529
    812692 8fxr:g5 (4.5) BS01 peptide ? N/A N/A 37684529
    812693 8fxr:g6 (4.5) BS01 peptide ? N/A N/A 37684529
    812694 8fxr:g7 (4.5) BS01 peptide ? N/A N/A 37684529
    812695 8fxr:h1 (4.5) BS01 peptide ? N/A N/A 37684529
    812696 8fxr:h2 (4.5) BS01 peptide ? N/A N/A 37684529
    812697 8fxr:h5 (4.5) BS01 peptide ? N/A N/A 37684529
    812698 8fxr:h6 (4.5) BS01 peptide ? N/A N/A 37684529
    812699 8fxr:h7 (4.5) BS01 peptide ? N/A N/A 37684529
    812700 8fxr:k1 (4.5) BS01 peptide ? N/A N/A 37684529
    812701 8fxr:k1 (4.5) BS02 peptide ? N/A N/A 37684529
    812702 8fxr:k2 (4.5) BS01 peptide ? N/A N/A 37684529
    812703 8fxr:k2 (4.5) BS02 peptide ? N/A N/A 37684529
    812704 8fxr:k5 (4.5) BS01 peptide ? N/A N/A 37684529
    812705 8fxr:k5 (4.5) BS02 peptide ? N/A N/A 37684529
    812706 8fxr:k6 (4.5) BS01 peptide ? N/A N/A 37684529
    812707 8fxr:k6 (4.5) BS02 peptide ? N/A N/A 37684529
    812708 8fxr:k7 (4.5) BS01 peptide ? N/A N/A 37684529
    812709 8fxr:k7 (4.5) BS02 peptide ? N/A N/A 37684529
    812710 8fxr:l1 (4.5) BS01 peptide ? N/A N/A 37684529
    812711 8fxr:l2 (4.5) BS01 peptide ? N/A N/A 37684529
    812712 8fxr:l5 (4.5) BS01 peptide ? N/A N/A 37684529
    812713 8fxr:l6 (4.5) BS01 peptide ? N/A N/A 37684529
    812714 8fxr:l7 (4.5) BS01 peptide ? N/A N/A 37684529
    812715 8fxr:m1 (4.5) BS01 peptide ? N/A N/A 37684529
    812716 8fxr:m2 (4.5) BS01 peptide ? N/A N/A 37684529
    812717 8fxr:m5 (4.5) BS01 peptide ? N/A N/A 37684529
    812718 8fxr:m6 (4.5) BS01 peptide ? N/A N/A 37684529
    812719 8fxr:m7 (4.5) BS01 peptide ? N/A N/A 37684529
    812720 8fxr:n1 (4.5) BS01 peptide ? N/A N/A 37684529
    812721 8fxr:n1 (4.5) BS02 peptide ? N/A N/A 37684529
    812722 8fxr:n2 (4.5) BS01 peptide ? N/A N/A 37684529
    812723 8fxr:n2 (4.5) BS02 peptide ? N/A N/A 37684529
    812724 8fxr:n5 (4.5) BS01 peptide ? N/A N/A 37684529
    812725 8fxr:n5 (4.5) BS02 peptide ? N/A N/A 37684529
    812726 8fxr:n6 (4.5) BS01 peptide ? N/A N/A 37684529
    812727 8fxr:n6 (4.5) BS02 peptide ? N/A N/A 37684529
    812728 8fxr:n7 (4.5) BS01 peptide ? N/A N/A 37684529
    812729 8fxr:n7 (4.5) BS02 peptide ? N/A N/A 37684529
    812730 8fxr:o1 (4.5) BS01 peptide ? N/A N/A 37684529
    812731 8fxr:o1 (4.5) BS02 peptide ? N/A N/A 37684529
    812732 8fxr:o2 (4.5) BS01 peptide ? N/A N/A 37684529
    812733 8fxr:o5 (4.5) BS01 peptide ? N/A N/A 37684529
    812734 8fxr:o6 (4.5) BS01 peptide ? N/A N/A 37684529
    812735 8fxr:o7 (4.5) BS01 peptide ? N/A N/A 37684529
    812736 8fxr:r1 (4.5) BS01 peptide ? N/A N/A 37684529
    812737 8fxr:r1 (4.5) BS02 peptide ? N/A N/A 37684529
    812738 8fxr:r2 (4.5) BS01 peptide ? N/A N/A 37684529
    812739 8fxr:r2 (4.5) BS02 peptide ? N/A N/A 37684529
    812740 8fxr:r5 (4.5) BS01 peptide ? N/A N/A 37684529
    812741 8fxr:r5 (4.5) BS02 peptide ? N/A N/A 37684529
    812742 8fxr:r6 (4.5) BS01 peptide ? N/A N/A 37684529
    812743 8fxr:r6 (4.5) BS02 peptide ? N/A N/A 37684529
    812744 8fxr:r7 (4.5) BS01 peptide ? N/A N/A 37684529
    812745 8fxr:r7 (4.5) BS02 peptide ? N/A N/A 37684529
    812746 8fxr:s1 (4.5) BS01 peptide ? N/A N/A 37684529
    812747 8fxr:s2 (4.5) BS01 peptide ? N/A N/A 37684529
    812748 8fxr:s5 (4.5) BS01 peptide ? N/A N/A 37684529
    812749 8fxr:s6 (4.5) BS01 peptide ? N/A N/A 37684529
    812750 8fxr:s7 (4.5) BS01 peptide ? N/A N/A 37684529
    812751 8fxr:t1 (4.5) BS01 peptide ? N/A N/A 37684529
    812752 8fxr:t2 (4.5) BS01 peptide ? N/A N/A 37684529
    812753 8fxr:t5 (4.5) BS01 peptide ? N/A N/A 37684529
    812754 8fxr:t6 (4.5) BS01 peptide ? N/A N/A 37684529
    812755 8fxr:t7 (4.5) BS01 peptide ? N/A N/A 37684529
    812756 8fxr:u1 (4.5) BS01 peptide ? N/A N/A 37684529
    812757 8fxr:u2 (4.5) BS01 peptide ? N/A N/A 37684529
    812758 8fxr:u5 (4.5) BS01 peptide ? N/A N/A 37684529
    812759 8fxr:u6 (4.5) BS01 peptide ? N/A N/A 37684529
    812760 8fxr:u7 (4.5) BS01 peptide ? N/A N/A 37684529
    812761 8fxr:v1 (4.5) BS01 peptide ? N/A N/A 37684529
    812762 8fxr:v2 (4.5) BS01 peptide ? N/A N/A 37684529
    812763 8fxr:v5 (4.5) BS01 peptide ? N/A N/A 37684529
    812764 8fxr:v6 (4.5) BS01 peptide ? N/A N/A 37684529
    812765 8fxr:v7 (4.5) BS01 peptide ? N/A N/A 37684529
    812766 8fxt:A (1.53) BS01 YDM ? GO:0005509 ... P0AEE5 37598249
    812767 8fxt:A (1.53) BS02 GLC ? GO:0005509 ... P0AEE5 37598249
    812768 8fxt:A (1.53) BS03 BGC ? GO:0005509 ... P0AEE5 37598249
    812769 8fxt:A (1.53) BS04 BGC ? GO:0005509 ... P0AEE5 37598249
    812770 8fxt:A (1.53) BS05 BGC ? GO:0005509 ... P0AEE5 37598249
    812771 8fxt:A (1.53) BS06 BGC ? GO:0005509 ... P0AEE5 37598249
    812772 8fxt:A (1.53) BS07 BGC ? GO:0005509 ... P0AEE5 37598249
    812773 8fxt:A (1.53) BS08 CA ? GO:0005509 ... P0AEE5 37598249
    812774 8fxu:A (1.59) BS01 BGC ? GO:0030246 ... D9TSJ1 37598249
    812775 8fxu:A (1.59) BS02 CA ? GO:0030246 ... D9TSJ1 37598249
    812776 8fxu:A (1.59) BS03 YDQ ? GO:0030246 ... D9TSJ1 37598249
    812777 8fy0:A (2.94) BS01 YF8 ? N/A P40337 38548768
    812778 8fy0:D (2.94) BS01 YF8 ? GO:0001836 ... Q07817 38548768
    812779 8fy1:A (2.56) BS01 YF8 ? N/A P40337 38548768
    812780 8fy1:D (2.56) BS01 YF8 ? GO:0016020 ... P10415 38548768
    812781 8fy2:A (2.98) BS01 YFH ? N/A P40337 38548768
    812782 8fy2:D (2.98) BS01 YFH ? GO:0016020 ... P10415 38548768
    812783 8fy5:A (3.5) BS01 peptide ? GO:0005267 ... Q9BSA9 37390818
    812784 8fy5:B (3.5) BS01 peptide ? GO:0005267 ... Q9BSA9 37390818
    812785 8fy6:A (2.0) BS01 OW1 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37595260
    812786 8fy7:A (1.94) BS01 YFK 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37595260
    812787 8fy7:B (1.94) BS01 YFK 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37595260
    812788 8fy8:R (2.79) BS01 YFW ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812789 8fy8:R (2.79) BS02 J40 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812790 8fy8:R (2.79) BS03 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812791 8fy8:R (2.79) BS04 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812792 8fy9:A (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPG7 37316664
    812793 8fy9:B (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812794 8fy9:B (3.1) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812795 8fy9:C (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812796 8fy9:C (3.1) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812797 8fy9:D (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPG7 37316664
    812798 8fy9:E (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812799 8fy9:E (3.1) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812800 8fy9:F (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).