SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    812801 8fy9:F (3.1) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812802 8fya:A (2.91) BS01 dna N/A GO:0003676 ... A0AA82WPG7 37316664
    812803 8fya:B (2.91) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812804 8fya:B (2.91) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812805 8fya:C (2.91) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812806 8fya:C (2.91) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812807 8fya:D (2.91) BS01 dna N/A GO:0003676 ... A0AA82WPG7 37316664
    812808 8fya:E (2.91) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812809 8fya:E (2.91) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812810 8fya:F (2.91) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812811 8fya:F (2.91) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812812 8fyb:A (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPG7 37316664
    812813 8fyb:B (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812814 8fyb:B (3.1) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812815 8fyb:C (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812816 8fyb:C (3.1) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812817 8fyb:D (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPG7 37316664
    812818 8fyb:E (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812819 8fyb:E (3.1) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812820 8fyb:E (3.1) BS03 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812821 8fyb:E (3.1) BS04 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812822 8fyb:F (3.1) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812823 8fyc:A (4.1) BS01 dna N/A N/A A0AA82WPG5 37316664
    812824 8fyc:B (4.1) BS01 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812825 8fyc:B (4.1) BS02 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812826 8fyc:C (4.1) BS01 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812827 8fyc:C (4.1) BS02 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812828 8fyc:D (4.1) BS01 dna N/A N/A A0AA82WPG5 37316664
    812829 8fyc:E (4.1) BS01 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812830 8fyc:E (4.1) BS02 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812831 8fyc:E (4.1) BS03 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812832 8fyc:E (4.1) BS04 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812833 8fyc:F (4.1) BS01 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812834 8fyc:F (4.1) BS02 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812835 8fyc:F (4.1) BS03 dna N/A GO:0003676 ... A0AA82WPG6 37316664
    812836 8fyc:K (4.1) BS01 dna N/A GO:0003676 ... A0AA82WPG4 37316664
    812837 8fyd:A (3.9) BS01 dna N/A GO:0003676 ... A0AA82WPG7 37316664
    812838 8fyd:B (3.9) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812839 8fyd:B (3.9) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812840 8fyd:B (3.9) BS03 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812841 8fyd:C (3.9) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812842 8fyd:C (3.9) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812843 8fyd:E (3.9) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812844 8fyd:E (3.9) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812845 8fyd:E (3.9) BS03 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812846 8fyd:E (3.9) BS04 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812847 8fyd:F (3.9) BS01 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812848 8fyd:F (3.9) BS02 dna N/A GO:0003676 ... A0AA82WPF9 37316664
    812849 8fye:R (2.85) BS01 YGH ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812850 8fye:R (2.85) BS02 J40 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812851 8fye:R (2.85) BS03 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812852 8fye:R (2.85) BS04 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812853 8fyf:A (3.4) BS01 peptide ? GO:0005267 ... Q9BSA9 37390818
    812854 8fyf:B (3.4) BS01 peptide ? GO:0005267 ... Q9BSA9 37390818
    812855 8fyh:A (3.4) BS01 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812856 8fyh:A (3.4) BS02 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812857 8fyh:A (3.4) BS03 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812858 8fyh:A (3.4) BS04 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812859 8fyh:A (3.4) BS05 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812860 8fyh:A (3.4) BS06 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812861 8fyh:A (3.4) BS07 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812862 8fyh:G (3.4) BS01 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812863 8fyh:G (3.4) BS02 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812864 8fyh:G (3.4) BS03 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812865 8fyh:G (3.4) BS04 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812866 8fyh:G (3.4) BS05 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812867 8fyh:G (3.4) BS06 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812868 8fyh:G (3.4) BS07 ZN 2.1.1.356 GO:0006338 ... Q15910 37733873
    812869 8fyl:R (2.94) BS01 J40 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812870 8fyl:R (2.94) BS02 YG7 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812871 8fyl:R (2.94) BS03 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812872 8fyl:R (2.94) BS04 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812873 8fym:B (2.45) BS01 peptide N/A N/A N/A 37940661
    812874 8fym:E (2.45) BS01 peptide N/A N/A N/A 37940661
    812875 8fym:H (2.45) BS01 peptide N/A N/A N/A 37940661
    812876 8fym:I (2.45) BS01 peptide N/A N/A N/A 37940661
    812877 8fym:I (2.45) BS02 1HC N/A N/A N/A 37940661
    812878 8fyn:A (2.0) BS01 ZMA ? GO:0001609 ... P0ABE7
    P29274
    36841804
    812879 8fyn:A (2.0) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    36841804
    812880 8fyn:A (2.0) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    36841804
    812881 8fyn:A (2.0) BS04 CLR ? GO:0001609 ... P0ABE7
    P29274
    36841804
    812882 8fyo:A (1.39) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812883 8fyo:A (1.39) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812884 8fyp:A (1.45) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812885 8fyp:A (1.45) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812886 8fyq:A (1.4) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812887 8fyq:A (1.4) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812888 8fyr:A (1.5) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812889 8fyr:A (1.5) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812890 8fys:A (1.8) BS01 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812891 8fys:A (1.8) BS02 CA 3.4.21.64 GO:0004252 ... P06873 36841804
    812892 8fyt:R (2.64) BS01 7LD ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812893 8fyt:R (2.64) BS02 J40 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812894 8fyt:R (2.64) BS03 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812895 8fyt:R (2.64) BS04 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812896 8fyu:A (1.84839) BS01 peptide 2.3.2.27 N/A Q9UNE7 39266525
    812897 8fyu:B (1.84839) BS01 peptide 2.3.2.27 N/A Q9UNE7 39266525
    812898 8fyv:A (2.2) BS01 SER ? GO:0006935 ... A0A5W2VA06 38820052
    812899 8fyv:B (2.2) BS01 SER ? GO:0006935 ... A0A5W2VA06 38820052
    812900 8fyv:C (2.2) BS01 SER ? GO:0006935 ... A0A5W2VA06 38820052
    812901 8fyv:D (2.2) BS01 SER ? GO:0006935 ... A0A5W2VA06 38820052
    812902 8fyv:E (2.2) BS01 SER ? GO:0006935 ... A0A5W2VA06 38820052
    812903 8fyw:1 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812904 8fyw:2 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812905 8fyw:3 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812906 8fyw:4 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812907 8fyw:5 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812908 8fyw:6 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812909 8fyw:7 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812910 8fyw:8 (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812911 8fyw:A (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812912 8fyw:B (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812913 8fyw:C (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812914 8fyw:D (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812915 8fyw:E (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812916 8fyw:F (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812917 8fyw:G (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812918 8fyw:H (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812919 8fyw:I (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812920 8fyw:J (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812921 8fyw:K (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812922 8fyw:L (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812923 8fyw:M (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812924 8fyw:N (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812925 8fyw:O (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812926 8fyw:P (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812927 8fyw:Q (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812928 8fyw:R (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812929 8fyw:S (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812930 8fyw:T (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812931 8fyw:U (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812932 8fyw:V (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812933 8fyw:W (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812934 8fyw:X (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812935 8fyw:Y (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812936 8fyw:Z (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812937 8fyw:a (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812938 8fyw:b (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812939 8fyw:c (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812940 8fyw:d (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812941 8fyw:e (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812942 8fyw:f (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812943 8fyw:g (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812944 8fyw:h (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812945 8fyw:i (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812946 8fyw:j (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812947 8fyw:k (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812948 8fyw:l (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812949 8fyw:m (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812950 8fyw:n (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812951 8fyw:o (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812952 8fyw:p (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812953 8fyw:q (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812954 8fyw:r (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812955 8fyw:s (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812956 8fyw:t (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812957 8fyw:u (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812958 8fyw:v (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812959 8fyw:w (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812960 8fyw:x (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812961 8fyw:y (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812962 8fyw:z (2.84) BS01 DA ? GO:0005198 ... P03135 N/A
    812963 8fyx:R (2.62) BS01 YLX ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812964 8fyx:R (2.62) BS02 J40 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812965 8fyx:R (2.62) BS03 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812966 8fyx:R (2.62) BS04 Y01 ? GO:0001586 ... P08908
    P0ABE7
    38720072
    812967 8fyy:A (2.8) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812968 8fyy:A (2.8) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812969 8fyy:A (2.8) BS03 YH0 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812970 8fyz:A (3.4) BS01 YNQ 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812971 8fyz:B (3.4) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812972 8fyz:B (3.4) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812973 8fyz:B (3.4) BS03 YNQ 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812974 8fz1:A (2.7) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812975 8fz1:A (2.7) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812976 8fz1:A (2.7) BS03 YVB 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812977 8fz1:B (2.7) BS01 GLC 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812978 8fz1:B (2.7) BS02 FRU 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812979 8fz1:B (2.7) BS03 YVB 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 38372302
    812980 8fz2:H (3.5) BS01 peptide N/A N/A N/A 37940661
    812981 8fz2:L (3.5) BS01 peptide N/A N/A N/A 37940661
    812982 8fz4:A (2.19) BS01 MG ? N/A P58335 37747038
    812983 8fz4:B (2.19) BS01 MG ? N/A P58335 37747038
    812984 8fz7:A (2.88) BS01 PGW ? GO:0005886 ... O27564 37653172
    812985 8fz7:A (2.88) BS02 PGW ? GO:0005886 ... O27564 37653172
    812986 8fz7:C (2.88) BS01 PGW ? GO:0005886 ... O27564 37653172
    812987 8fz7:C (2.88) BS02 PGW ? GO:0005886 ... O27564 37653172
    812988 8fz7:E (2.88) BS01 PGW ? GO:0005886 ... O27564 37653172
    812989 8fz7:E (2.88) BS02 PGW ? GO:0005886 ... O27564 37653172
    812990 8fz7:G (2.88) BS01 PGW ? GO:0005886 ... O27564 37653172
    812991 8fz8:A (1.43) BS01 HEM ? GO:0004497 ... A0A5P2W9N6 38511621
    812992 8fz8:A (1.43) BS02 OCA ? GO:0004497 ... A0A5P2W9N6 38511621
    812993 8fzb:A (3.35) BS01 SAH 2.1.1.- GO:0005515 ... Q96G04 37209825
    812994 8fzb:B (3.35) BS01 SAH 2.1.1.- GO:0005515 ... Q96G04 37209825
    812995 8fzb:C (3.35) BS01 SAH 2.1.1.- GO:0005515 ... Q96G04 37209825
    812996 8fzd:1 (3.1) BS01 rna N/A GO:0000027 ... P0A7M6 39030416
    812997 8fzd:2 (3.1) BS01 rna N/A GO:0000027 ... P0AG51 39030416
    812998 8fzd:3 (3.1) BS01 rna N/A GO:0002181 ... P0A7M9 39030416
    812999 8fzd:3 (3.1) BS02 ZN N/A GO:0002181 ... P0A7M9 39030416
    813000 8fzd:4 (3.1) BS01 rna N/A GO:0000027 ... P0A7N4 39030416

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).