SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    813601 8g7r:L (2.8) BS02 MG N/A GO:0002181 ... P0AA10 38538914
    813602 8g7r:L (2.8) BS03 MG N/A GO:0002181 ... P0AA10 38538914
    813603 8g7r:M (2.8) BS01 rna ? GO:0002181 ... P0ADY3 38538914
    813604 8g7r:M (2.8) BS02 rna ? GO:0002181 ... P0ADY3 38538914
    813605 8g7r:N (2.8) BS01 rna N/A GO:0002181 ... P02413 38538914
    813606 8g7r:O (2.8) BS01 rna N/A GO:0000027 ... P0ADY7 38538914
    813607 8g7r:O (2.8) BS02 rna N/A GO:0000027 ... P0ADY7 38538914
    813608 8g7r:P (2.8) BS01 rna N/A GO:0000027 ... P0AG44 38538914
    813609 8g7r:Q (2.8) BS01 rna N/A GO:0002181 ... P0C018 38538914
    813610 8g7r:Q (2.8) BS02 rna N/A GO:0002181 ... P0C018 38538914
    813611 8g7r:R (2.8) BS01 rna N/A GO:0000027 ... P0A7K6 38538914
    813612 8g7r:R (2.8) BS02 rna N/A GO:0000027 ... P0A7K6 38538914
    813613 8g7r:S (2.8) BS01 rna ? GO:0000027 ... P0A7L3 38538914
    813614 8g7r:T (2.8) BS01 rna N/A GO:0002181 ... P0AG48 38538914
    813615 8g7r:U (2.8) BS01 rna ? GO:0002181 ... P61175 38538914
    813616 8g7r:V (2.8) BS01 rna N/A GO:0000027 ... P0ADZ0 38538914
    813617 8g7r:V (2.8) BS02 MG N/A GO:0000027 ... P0ADZ0 38538914
    813618 8g7r:W (2.8) BS01 rna N/A GO:0000027 ... P60624 38538914
    813619 8g7r:X (2.8) BS01 rna N/A GO:0000027 ... P68919 38538914
    813620 8g7r:Y (2.8) BS01 rna ? GO:0000027 ... P0A7L8 38538914
    813621 8g7r:Z (2.8) BS01 rna ? GO:0000027 ... P0A7M2 38538914
    813622 8g7r:b (2.8) BS01 rna ? GO:0000028 ... P0A7V0 38538914
    813623 8g7r:c (2.8) BS01 rna ? GO:0000028 ... P0A7V3 38538914
    813624 8g7r:d (2.8) BS01 rna ? GO:0000028 ... P0A7V8 38538914
    813625 8g7r:e (2.8) BS01 rna ? GO:0000028 ... P0A7W1 38538914
    813626 8g7r:f (2.8) BS01 rna ? GO:0002181 ... P02358 38538914
    813627 8g7r:g (2.8) BS01 rna ? GO:0003723 ... P02359 38538914
    813628 8g7r:g (2.8) BS02 rna ? GO:0003723 ... P02359 38538914
    813629 8g7r:h (2.8) BS01 rna N/A GO:0000028 ... P0A7W7 38538914
    813630 8g7r:i (2.8) BS01 rna N/A GO:0000049 ... P0A7X3 38538914
    813631 8g7r:i (2.8) BS02 rna N/A GO:0000049 ... P0A7X3 38538914
    813632 8g7r:j (2.8) BS01 rna N/A GO:0000049 ... P0A7R5 38538914
    813633 8g7r:k (2.8) BS01 rna ? GO:0002181 ... P0A7R9 38538914
    813634 8g7r:l (2.8) BS01 rna ? GO:0000049 ... P0A7S3 38538914
    813635 8g7r:m (2.8) BS01 rna ? GO:0000049 ... P0A7S9 38538914
    813636 8g7r:m (2.8) BS02 rna ? GO:0000049 ... P0A7S9 38538914
    813637 8g7r:n (2.8) BS01 rna N/A GO:0000028 ... P0AG59 38538914
    813638 8g7r:o (2.8) BS01 rna N/A GO:0000028 ... P0ADZ4 38538914
    813639 8g7r:o (2.8) BS02 rna N/A GO:0000028 ... P0ADZ4 38538914
    813640 8g7r:p (2.8) BS01 rna ? GO:0000028 ... P0A7T3 38538914
    813641 8g7r:q (2.8) BS01 rna N/A GO:0000028 ... P0AG63 38538914
    813642 8g7r:r (2.8) BS01 rna ? GO:0002181 ... P0A7T7 38538914
    813643 8g7r:s (2.8) BS01 rna N/A GO:0000028 ... P0A7U3 38538914
    813644 8g7r:t (2.8) BS01 rna ? GO:0000028 ... P0A7U7 38538914
    813645 8g7r:u (2.8) BS01 rna ? GO:0000028 ... P68679 38538914
    813646 8g7s:1 (3.1) BS01 rna N/A GO:0000027 ... P0A7M6 38538914
    813647 8g7s:2 (3.1) BS01 rna N/A GO:0000027 ... P0AG51 38538914
    813648 8g7s:3 (3.1) BS01 rna ? GO:0002181 ... P0A7M9 38538914
    813649 8g7s:3 (3.1) BS02 ZN ? GO:0002181 ... P0A7M9 38538914
    813650 8g7s:4 (3.1) BS01 rna N/A GO:0000027 ... P0A7N4 38538914
    813651 8g7s:5 (3.1) BS01 rna N/A GO:0000027 ... P0A7N9 38538914
    813652 8g7s:6 (3.1) BS01 rna ? GO:0002181 ... P0A7P5 38538914
    813653 8g7s:7 (3.1) BS01 rna ? GO:0002181 ... P0A7Q1 38538914
    813654 8g7s:8 (3.1) BS01 rna ? GO:0002181 ... P0A7Q6 38538914
    813655 8g7s:8 (3.1) BS02 ZN ? GO:0002181 ... P0A7Q6 38538914
    813656 8g7s:C (3.1) BS01 rna ? GO:0000027 ... P60422 38538914
    813657 8g7s:D (3.1) BS01 rna N/A GO:0000027 ... P60438 38538914
    813658 8g7s:E (3.1) BS01 rna ? GO:0001070 ... P60723 38538914
    813659 8g7s:F (3.1) BS01 rna N/A GO:0000027 ... P62399 38538914
    813660 8g7s:F (3.1) BS02 rna N/A GO:0000027 ... P62399 38538914
    813661 8g7s:F (3.1) BS03 rna N/A GO:0000027 ... P62399 38538914
    813662 8g7s:G (3.1) BS01 rna ? GO:0000027 ... P0AG55 38538914
    813663 8g7s:H (3.1) BS01 rna N/A GO:0002181 ... P0A7R1 38538914
    813664 8g7s:L (3.1) BS01 rna N/A GO:0002181 ... P0AA10 38538914
    813665 8g7s:M (3.1) BS01 rna ? GO:0002181 ... P0ADY3 38538914
    813666 8g7s:M (3.1) BS02 rna ? GO:0002181 ... P0ADY3 38538914
    813667 8g7s:N (3.1) BS01 rna N/A GO:0002181 ... P02413 38538914
    813668 8g7s:O (3.1) BS01 rna N/A GO:0000027 ... P0ADY7 38538914
    813669 8g7s:P (3.1) BS01 rna N/A GO:0000027 ... P0AG44 38538914
    813670 8g7s:Q (3.1) BS01 rna N/A GO:0002181 ... P0C018 38538914
    813671 8g7s:Q (3.1) BS02 rna N/A GO:0002181 ... P0C018 38538914
    813672 8g7s:R (3.1) BS01 rna N/A GO:0000027 ... P0A7K6 38538914
    813673 8g7s:R (3.1) BS02 rna N/A GO:0000027 ... P0A7K6 38538914
    813674 8g7s:S (3.1) BS01 rna ? GO:0000027 ... P0A7L3 38538914
    813675 8g7s:T (3.1) BS01 rna N/A GO:0002181 ... P0AG48 38538914
    813676 8g7s:U (3.1) BS01 rna ? GO:0002181 ... P61175 38538914
    813677 8g7s:V (3.1) BS01 rna N/A GO:0000027 ... P0ADZ0 38538914
    813678 8g7s:W (3.1) BS01 rna N/A GO:0000027 ... P60624 38538914
    813679 8g7s:X (3.1) BS01 rna N/A GO:0000027 ... P68919 38538914
    813680 8g7s:Y (3.1) BS01 rna ? GO:0000027 ... P0A7L8 38538914
    813681 8g7s:Y (3.1) BS02 rna ? GO:0000027 ... P0A7L8 38538914
    813682 8g7s:Z (3.1) BS01 rna ? GO:0000027 ... P0A7M2 38538914
    813683 8g7s:b (3.1) BS01 rna ? GO:0000028 ... P0A7V0 38538914
    813684 8g7s:c (3.1) BS01 rna ? GO:0000028 ... P0A7V3 38538914
    813685 8g7s:d (3.1) BS01 rna ? GO:0000028 ... P0A7V8 38538914
    813686 8g7s:e (3.1) BS01 rna ? GO:0000028 ... P0A7W1 38538914
    813687 8g7s:f (3.1) BS01 rna ? GO:0002181 ... P02358 38538914
    813688 8g7s:g (3.1) BS01 rna ? GO:0003723 ... P02359 38538914
    813689 8g7s:g (3.1) BS02 rna ? GO:0003723 ... P02359 38538914
    813690 8g7s:h (3.1) BS01 rna N/A GO:0000028 ... P0A7W7 38538914
    813691 8g7s:i (3.1) BS01 rna N/A GO:0000049 ... P0A7X3 38538914
    813692 8g7s:j (3.1) BS01 rna N/A GO:0000049 ... P0A7R5 38538914
    813693 8g7s:k (3.1) BS01 rna ? GO:0002181 ... P0A7R9 38538914
    813694 8g7s:l (3.1) BS01 rna ? GO:0000049 ... P0A7S3 38538914
    813695 8g7s:m (3.1) BS01 rna ? GO:0000049 ... P0A7S9 38538914
    813696 8g7s:m (3.1) BS02 rna ? GO:0000049 ... P0A7S9 38538914
    813697 8g7s:n (3.1) BS01 rna N/A GO:0000028 ... P0AG59 38538914
    813698 8g7s:o (3.1) BS01 rna N/A GO:0000028 ... P0ADZ4 38538914
    813699 8g7s:o (3.1) BS02 rna N/A GO:0000028 ... P0ADZ4 38538914
    813700 8g7s:p (3.1) BS01 rna ? GO:0000028 ... P0A7T3 38538914
    813701 8g7s:q (3.1) BS01 rna N/A GO:0000028 ... P0AG63 38538914
    813702 8g7s:r (3.1) BS01 rna ? GO:0002181 ... P0A7T7 38538914
    813703 8g7s:s (3.1) BS01 rna N/A GO:0000028 ... P0A7U3 38538914
    813704 8g7s:t (3.1) BS01 rna ? GO:0000028 ... P0A7U7 38538914
    813705 8g7s:u (3.1) BS01 rna ? GO:0000028 ... P68679 38538914
    813706 8g7t:A (3.2) BS01 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813707 8g7t:A (3.2) BS02 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813708 8g7t:A (3.2) BS03 ZN 3.6.4.13 GO:0002230 ... O95786 37951994
    813709 8g7t:C (3.2) BS01 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813710 8g7t:C (3.2) BS02 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813711 8g7t:C (3.2) BS03 ZN 3.6.4.13 GO:0002230 ... O95786 37951994
    813712 8g7u:A (4.0) BS01 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813713 8g7u:A (4.0) BS02 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813714 8g7u:C (4.0) BS01 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813715 8g7u:C (4.0) BS02 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813716 8g7u:C (4.0) BS03 ZN 3.6.4.13 GO:0002230 ... O95786 37951994
    813717 8g7v:A (3.9) BS01 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813718 8g7v:A (3.9) BS02 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813719 8g7v:C (3.9) BS01 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813720 8g7v:C (3.9) BS02 rna 3.6.4.13 GO:0002230 ... O95786 37951994
    813721 8g7v:C (3.9) BS03 ZN 3.6.4.13 GO:0002230 ... O95786 37951994
    813722 8g7w:A (3.4) BS01 NAP ? GO:0008270 ... A0A1Z1MZ77 37348494
    813723 8g7w:A (3.4) BS02 NAP ? GO:0008270 ... A0A1Z1MZ77 37348494
    813724 8g7w:B (3.4) BS01 NAP ? GO:0008270 ... A0A1Z1MZ77 37348494
    813725 8g84:A (2.467) BS01 NAD ? GO:0000166 ... A0A8I3RYU0 37620305
    813726 8g84:B (2.467) BS01 NAD ? GO:0000166 ... A0A8I3RYU0 37620305
    813727 8g86:A (2.3) BS01 dna ? GO:0000786 ... P84233 37225990
    813728 8g86:A (2.3) BS02 dna ? GO:0000786 ... P84233 37225990
    813729 8g86:B (2.3) BS01 dna ? GO:0000786 ... P62799 37225990
    813730 8g86:B (2.3) BS02 dna ? GO:0000786 ... P62799 37225990
    813731 8g86:C (2.3) BS01 dna ? GO:0000786 ... Q6AZJ8 37225990
    813732 8g86:C (2.3) BS02 dna ? GO:0000786 ... Q6AZJ8 37225990
    813733 8g86:D (2.3) BS01 dna ? GO:0000786 ... P02281 37225990
    813734 8g86:D (2.3) BS02 dna ? GO:0000786 ... P02281 37225990
    813735 8g86:E (2.3) BS01 dna ? GO:0000786 ... P84233 37225990
    813736 8g86:E (2.3) BS02 dna ? GO:0000786 ... P84233 37225990
    813737 8g86:F (2.3) BS01 dna ? GO:0000786 ... P62799 37225990
    813738 8g86:F (2.3) BS02 dna ? GO:0000786 ... P62799 37225990
    813739 8g86:G (2.3) BS01 dna ? GO:0000786 ... Q6AZJ8 37225990
    813740 8g86:G (2.3) BS02 dna ? GO:0000786 ... Q6AZJ8 37225990
    813741 8g86:H (2.3) BS01 dna ? GO:0000786 ... P02281 37225990
    813742 8g86:H (2.3) BS02 dna ? GO:0000786 ... P02281 37225990
    813743 8g87:X (8.1) BS01 dna ? GO:0000122 ... Q01860 37225990
    813744 8g87:X (8.1) BS02 dna ? GO:0000122 ... Q01860 37225990
    813745 8g88:A (2.3) BS01 dna ? GO:0000786 ... P84233 37225990
    813746 8g88:A (2.3) BS02 dna ? GO:0000786 ... P84233 37225990
    813747 8g88:B (2.3) BS01 dna ? GO:0000786 ... P62799 37225990
    813748 8g88:B (2.3) BS02 dna ? GO:0000786 ... P62799 37225990
    813749 8g88:C (2.3) BS01 dna ? GO:0000786 ... Q6AZJ8 37225990
    813750 8g88:C (2.3) BS02 dna ? GO:0000786 ... Q6AZJ8 37225990
    813751 8g88:D (2.3) BS01 dna ? GO:0000786 ... P02281 37225990
    813752 8g88:D (2.3) BS02 dna ? GO:0000786 ... P02281 37225990
    813753 8g88:E (2.3) BS01 dna ? GO:0000786 ... P84233 37225990
    813754 8g88:E (2.3) BS02 dna ? GO:0000786 ... P84233 37225990
    813755 8g88:F (2.3) BS01 dna ? GO:0000786 ... P62799 37225990
    813756 8g88:F (2.3) BS02 dna ? GO:0000786 ... P62799 37225990
    813757 8g88:G (2.3) BS01 dna ? GO:0000786 ... Q6AZJ8 37225990
    813758 8g88:G (2.3) BS02 dna ? GO:0000786 ... Q6AZJ8 37225990
    813759 8g88:H (2.3) BS01 dna ? GO:0000786 ... P02281 37225990
    813760 8g88:H (2.3) BS02 dna ? GO:0000786 ... P02281 37225990
    813761 8g88:X (2.3) BS01 dna ? GO:0000122 ... Q01860 37225990
    813762 8g88:X (2.3) BS02 dna ? GO:0000122 ... Q01860 37225990
    813763 8g89:A (2.222) BS01 NAD ? GO:0000166 ... A0A8I3RYU0 37620305
    813764 8g89:A (2.222) BS02 YXW ? GO:0000166 ... A0A8I3RYU0 37620305
    813765 8g89:B (2.222) BS01 NAD ? GO:0000166 ... A0A8I3RYU0 37620305
    813766 8g8a:A (2.44) BS01 peptide N/A N/A N/A 38761800
    813767 8g8a:H (2.44) BS01 peptide N/A N/A N/A 38761800
    813768 8g8a:L (2.44) BS01 peptide N/A N/A N/A 38761800
    813769 8g8b:A (4.3) BS01 dna ? GO:0000786 ... P84233 37225990
    813770 8g8b:A (4.3) BS02 dna ? GO:0000786 ... P84233 37225990
    813771 8g8b:B (4.3) BS01 dna ? GO:0000786 ... P62799 37225990
    813772 8g8b:B (4.3) BS02 dna ? GO:0000786 ... P62799 37225990
    813773 8g8b:C (4.3) BS01 dna ? GO:0000786 ... Q6AZJ8 37225990
    813774 8g8b:C (4.3) BS02 dna ? GO:0000786 ... Q6AZJ8 37225990
    813775 8g8b:D (4.3) BS01 dna ? GO:0000786 ... P02281 37225990
    813776 8g8b:D (4.3) BS02 dna ? GO:0000786 ... P02281 37225990
    813777 8g8b:E (4.3) BS01 dna ? GO:0000786 ... P84233 37225990
    813778 8g8b:E (4.3) BS02 dna ? GO:0000786 ... P84233 37225990
    813779 8g8b:F (4.3) BS01 dna ? GO:0000786 ... P62799 37225990
    813780 8g8b:F (4.3) BS02 dna ? GO:0000786 ... P62799 37225990
    813781 8g8b:G (4.3) BS01 dna ? GO:0000786 ... Q6AZJ8 37225990
    813782 8g8b:G (4.3) BS02 dna ? GO:0000786 ... Q6AZJ8 37225990
    813783 8g8b:H (4.3) BS01 dna ? GO:0000786 ... P02281 37225990
    813784 8g8b:H (4.3) BS02 dna ? GO:0000786 ... P02281 37225990
    813785 8g8b:X (4.3) BS01 dna ? GO:0000122 ... Q01860 37225990
    813786 8g8b:X (4.3) BS02 dna ? GO:0000122 ... Q01860 37225990
    813787 8g8c:A (2.08) BS01 peptide N/A N/A N/A 38761800
    813788 8g8c:B (2.08) BS01 peptide N/A N/A N/A 38761800
    813789 8g8c:H (2.08) BS01 peptide N/A N/A N/A 38761800
    813790 8g8c:L (2.08) BS01 peptide N/A N/A N/A 38761800
    813791 8g8d:A (2.02) BS01 peptide N/A N/A P0DOX5 38761800
    813792 8g8d:B (2.02) BS01 peptide N/A N/A N/A 38761800
    813793 8g8d:H (2.02) BS01 peptide N/A N/A P0DOX5 38761800
    813794 8g8d:L (2.02) BS01 peptide N/A N/A N/A 38761800
    813795 8g8e:X (3.9) BS01 dna ? GO:0000122 ... Q01860 37225990
    813796 8g8e:X (3.9) BS02 dna ? GO:0000122 ... Q01860 37225990
    813797 8g8f:A (2.6) BS01 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813798 8g8f:A (2.6) BS02 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813799 8g8f:A (2.6) BS03 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813800 8g8f:A (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... P12268 37414152

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).