SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    813801 8g29:1D (2.55) BS01 rna ? GO:0002181 ... P60405 38238495
    813802 8g29:1D (2.55) BS02 rna ? GO:0002181 ... P60405 38238495
    813803 8g29:1D (2.55) BS03 MG ? GO:0002181 ... P60405 38238495
    813804 8g29:1D (2.55) BS04 MG ? GO:0002181 ... P60405 38238495
    813805 8g29:1D (2.55) BS05 MG ? GO:0002181 ... P60405 38238495
    813806 8g29:1D (2.55) BS06 MG ? GO:0002181 ... P60405 38238495
    813807 8g29:1D (2.55) BS07 MG ? GO:0002181 ... P60405 38238495
    813808 8g29:1D (2.55) BS08 MG ? GO:0002181 ... P60405 38238495
    813809 8g29:1D (2.55) BS09 MG ? GO:0002181 ... P60405 38238495
    813810 8g29:1D (2.55) BS10 MG ? GO:0002181 ... P60405 38238495
    813811 8g29:1D (2.55) BS11 MG ? GO:0002181 ... P60405 38238495
    813812 8g29:1D (2.55) BS12 MG ? GO:0002181 ... P60405 38238495
    813813 8g29:1D (2.55) BS13 MG ? GO:0002181 ... P60405 38238495
    813814 8g29:1E (2.55) BS01 rna ? GO:0003735 ... Q5SHN8 38238495
    813815 8g29:1E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 38238495
    813816 8g29:1E (2.55) BS03 MG ? GO:0003735 ... Q5SHN8 38238495
    813817 8g29:1E (2.55) BS04 MG ? GO:0003735 ... Q5SHN8 38238495
    813818 8g29:1E (2.55) BS05 MG ? GO:0003735 ... Q5SHN8 38238495
    813819 8g29:1F (2.55) BS01 rna ? GO:0003735 ... Q5SHN9 38238495
    813820 8g29:1F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 38238495
    813821 8g29:1F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 38238495
    813822 8g29:1F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 38238495
    813823 8g29:1F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 38238495
    813824 8g29:1F (2.55) BS06 MG ? GO:0003735 ... Q5SHN9 38238495
    813825 8g29:1F (2.55) BS07 MG ? GO:0003735 ... Q5SHN9 38238495
    813826 8g29:1F (2.55) BS08 MG ? GO:0003735 ... Q5SHN9 38238495
    813827 8g29:1F (2.55) BS09 MG ? GO:0003735 ... Q5SHN9 38238495
    813828 8g29:1F (2.55) BS10 MG ? GO:0003735 ... Q5SHN9 38238495
    813829 8g29:1F (2.55) BS11 MG ? GO:0003735 ... Q5SHN9 38238495
    813830 8g29:1F (2.55) BS12 MG ? GO:0003735 ... Q5SHN9 38238495
    813831 8g29:1F (2.55) BS13 MG ? GO:0003735 ... Q5SHN9 38238495
    813832 8g29:1G (2.55) BS01 rna ? GO:0000049 ... Q5SHQ0 38238495
    813833 8g29:1G (2.55) BS02 rna ? GO:0000049 ... Q5SHQ0 38238495
    813834 8g29:1G (2.55) BS03 rna ? GO:0000049 ... Q5SHQ0 38238495
    813835 8g29:1G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 38238495
    813836 8g29:1H (2.55) BS01 rna ? GO:0002181 ... P0DOY8 38238495
    813837 8g29:1I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    813838 8g29:1N (2.55) BS01 rna ? GO:0003729 ... P60488 38238495
    813839 8g29:1N (2.55) BS02 MG ? GO:0003729 ... P60488 38238495
    813840 8g29:1N (2.55) BS03 MG ? GO:0003729 ... P60488 38238495
    813841 8g29:1N (2.55) BS04 MG ? GO:0003729 ... P60488 38238495
    813842 8g29:1O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    813843 8g29:1O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    813844 8g29:1O (2.55) BS03 MG ? GO:0003735 ... Q5SHP8 38238495
    813845 8g29:1P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    813846 8g29:1P (2.55) BS02 MG ? GO:0003735 ... Q5SHQ7 38238495
    813847 8g29:1P (2.55) BS03 MG ? GO:0003735 ... Q5SHQ7 38238495
    813848 8g29:1P (2.55) BS04 MG ? GO:0003735 ... Q5SHQ7 38238495
    813849 8g29:1P (2.55) BS05 MG ? GO:0003735 ... Q5SHQ7 38238495
    813850 8g29:1P (2.55) BS06 MG ? GO:0003735 ... Q5SHQ7 38238495
    813851 8g29:1Q (2.55) BS01 rna ? GO:0003735 ... P60489 38238495
    813852 8g29:1Q (2.55) BS02 rna ? GO:0003735 ... P60489 38238495
    813853 8g29:1Q (2.55) BS03 rna ? GO:0003735 ... P60489 38238495
    813854 8g29:1Q (2.55) BS04 rna ? GO:0003735 ... P60489 38238495
    813855 8g29:1Q (2.55) BS05 MG ? GO:0003735 ... P60489 38238495
    813856 8g29:1Q (2.55) BS06 MG ? GO:0003735 ... P60489 38238495
    813857 8g29:1Q (2.55) BS07 MG ? GO:0003735 ... P60489 38238495
    813858 8g29:1Q (2.55) BS08 MG ? GO:0003735 ... P60489 38238495
    813859 8g29:1Q (2.55) BS09 MG ? GO:0003735 ... P60489 38238495
    813860 8g29:1R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    813861 8g29:1R (2.55) BS02 MG ? GO:0003735 ... Q9Z9H5 38238495
    813862 8g29:1R (2.55) BS03 MG ? GO:0003735 ... Q9Z9H5 38238495
    813863 8g29:1S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    813864 8g29:1S (2.55) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    813865 8g29:1S (2.55) BS03 MG ? GO:0003735 ... Q5SHQ4 38238495
    813866 8g29:1S (2.55) BS04 MG ? GO:0003735 ... Q5SHQ4 38238495
    813867 8g29:1T (2.55) BS01 rna ? GO:0003735 ... P60490 38238495
    813868 8g29:1T (2.55) BS02 rna ? GO:0003735 ... P60490 38238495
    813869 8g29:1T (2.55) BS03 MG ? GO:0003735 ... P60490 38238495
    813870 8g29:1U (2.55) BS01 rna ? GO:0000027 ... P60491 38238495
    813871 8g29:1U (2.55) BS02 MG ? GO:0000027 ... P60491 38238495
    813872 8g29:1U (2.55) BS03 MG ? GO:0000027 ... P60491 38238495
    813873 8g29:1U (2.55) BS04 MG ? GO:0000027 ... P60491 38238495
    813874 8g29:1U (2.55) BS05 MG ? GO:0000027 ... P60491 38238495
    813875 8g29:1U (2.55) BS06 MG ? GO:0000027 ... P60491 38238495
    813876 8g29:1U (2.55) BS07 MG ? GO:0000027 ... P60491 38238495
    813877 8g29:1U (2.55) BS08 MG ? GO:0000027 ... P60491 38238495
    813878 8g29:1U (2.55) BS09 MG ? GO:0000027 ... P60491 38238495
    813879 8g29:1U (2.55) BS10 MG ? GO:0000027 ... P60491 38238495
    813880 8g29:1V (2.55) BS01 rna ? GO:0003723 ... P60492 38238495
    813881 8g29:1V (2.55) BS02 MG ? GO:0003723 ... P60492 38238495
    813882 8g29:1V (2.55) BS03 MG ? GO:0003723 ... P60492 38238495
    813883 8g29:1V (2.55) BS04 MG ? GO:0003723 ... P60492 38238495
    813884 8g29:1V (2.55) BS05 MG ? GO:0003723 ... P60492 38238495
    813885 8g29:1V (2.55) BS06 MG ? GO:0003723 ... P60492 38238495
    813886 8g29:1W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    813887 8g29:1W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    813888 8g29:1W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 38238495
    813889 8g29:1W (2.55) BS04 MG ? GO:0003735 ... Q5SHP3 38238495
    813890 8g29:1W (2.55) BS05 MG ? GO:0003735 ... Q5SHP3 38238495
    813891 8g29:1X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    813892 8g29:1X (2.55) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    813893 8g29:1X (2.55) BS03 MG ? GO:0003735 ... Q5SHP0 38238495
    813894 8g29:1X (2.55) BS04 MG ? GO:0003735 ... Q5SHP0 38238495
    813895 8g29:1X (2.55) BS05 MG ? GO:0003735 ... Q5SHP0 38238495
    813896 8g29:1X (2.55) BS06 MG ? GO:0003735 ... Q5SHP0 38238495
    813897 8g29:1Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    813898 8g29:1Y (2.55) BS02 MG ? GO:0003723 ... Q5SHP9 38238495
    813899 8g29:1Y (2.55) BS03 ZN ? GO:0003723 ... Q5SHP9 38238495
    813900 8g29:1Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    813901 8g29:1Z (2.55) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    813902 8g29:1Z (2.55) BS03 MG ? GO:0003723 ... Q5SHZ1 38238495
    813903 8g29:1b (2.55) BS01 rna ? GO:0003735 ... P80371 38238495
    813904 8g29:1c (2.55) BS01 rna ? GO:0003676 ... P80372 38238495
    813905 8g29:1d (2.55) BS01 rna ? GO:0003723 ... P80373 38238495
    813906 8g29:1d (2.55) BS02 SF4 ? GO:0003723 ... P80373 38238495
    813907 8g29:1e (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    813908 8g29:1e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    813909 8g29:1e (2.55) BS03 MG ? GO:0003723 ... Q5SHQ5 38238495
    813910 8g29:1f (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    813911 8g29:1f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 38238495
    813912 8g29:1g (2.55) BS01 rna ? GO:0000049 ... P17291 38238495
    813913 8g29:1g (2.55) BS02 rna ? GO:0000049 ... P17291 38238495
    813914 8g29:1h (2.55) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    813915 8g29:1i (2.55) BS01 rna ? GO:0003723 ... P80374 38238495
    813916 8g29:1i (2.55) BS02 rna ? GO:0003723 ... P80374 38238495
    813917 8g29:1j (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    813918 8g29:1k (2.55) BS01 rna ? GO:0003735 ... P80376 38238495
    813919 8g29:1k (2.55) BS02 MG ? GO:0003735 ... P80376 38238495
    813920 8g29:1l (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    813921 8g29:1m (2.55) BS01 rna ? GO:0000049 ... P80377 38238495
    813922 8g29:1m (2.55) BS02 rna ? GO:0000049 ... P80377 38238495
    813923 8g29:1m (2.55) BS03 MG ? GO:0000049 ... P80377 38238495
    813924 8g29:1n (2.55) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    813925 8g29:1n (2.55) BS02 MG ? GO:0003735 ... P0DOY6 38238495
    813926 8g29:1n (2.55) BS03 ZN ? GO:0003735 ... P0DOY6 38238495
    813927 8g29:1o (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    813928 8g29:1o (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    813929 8g29:1p (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    813930 8g29:1q (2.55) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    813931 8g29:1r (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    813932 8g29:1s (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    813933 8g29:1t (2.55) BS01 rna ? GO:0003723 ... P80380 38238495
    813934 8g29:1t (2.55) BS02 MG ? GO:0003723 ... P80380 38238495
    813935 8g29:20 (2.55) BS01 rna ? GO:0003735 ... P60493 38238495
    813936 8g29:20 (2.55) BS02 rna ? GO:0003735 ... P60493 38238495
    813937 8g29:20 (2.55) BS03 rna ? GO:0003735 ... P60493 38238495
    813938 8g29:20 (2.55) BS04 MG ? GO:0003735 ... P60493 38238495
    813939 8g29:21 (2.55) BS01 rna ? GO:0003735 ... P60494 38238495
    813940 8g29:21 (2.55) BS02 MG ? GO:0003735 ... P60494 38238495
    813941 8g29:22 (2.55) BS01 rna ? GO:0003735 ... Q5SHP6 38238495
    813942 8g29:23 (2.55) BS01 rna ? GO:0003735 ... Q5SHQ6 38238495
    813943 8g29:23 (2.55) BS02 rna ? GO:0003735 ... Q5SHQ6 38238495
    813944 8g29:23 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 38238495
    813945 8g29:24 (2.55) BS01 rna ? GO:0003735 ... Q5SJE1 38238495
    813946 8g29:24 (2.55) BS02 ZN ? GO:0003735 ... Q5SJE1 38238495
    813947 8g29:25 (2.55) BS01 rna ? GO:0003735 ... P80339 38238495
    813948 8g29:25 (2.55) BS02 MG ? GO:0003735 ... P80339 38238495
    813949 8g29:25 (2.55) BS03 ZN ? GO:0003735 ... P80339 38238495
    813950 8g29:26 (2.55) BS01 rna ? GO:0003735 ... P35871 38238495
    813951 8g29:26 (2.55) BS02 ZN ? GO:0003735 ... P35871 38238495
    813952 8g29:27 (2.55) BS01 rna ? GO:0003735 ... P80340 38238495
    813953 8g29:27 (2.55) BS02 MG ? GO:0003735 ... P80340 38238495
    813954 8g29:28 (2.55) BS01 rna ? GO:0003735 ... Q5SKU1 38238495
    813955 8g29:29 (2.55) BS01 rna ? GO:0003735 ... Q5SHR2 38238495
    813956 8g29:29 (2.55) BS02 ZN ? GO:0003735 ... Q5SHR2 38238495
    813957 8g29:2D (2.55) BS01 rna ? GO:0002181 ... P60405 38238495
    813958 8g29:2D (2.55) BS02 rna ? GO:0002181 ... P60405 38238495
    813959 8g29:2D (2.55) BS03 MG ? GO:0002181 ... P60405 38238495
    813960 8g29:2D (2.55) BS04 MG ? GO:0002181 ... P60405 38238495
    813961 8g29:2D (2.55) BS05 MG ? GO:0002181 ... P60405 38238495
    813962 8g29:2E (2.55) BS01 rna ? GO:0003735 ... Q5SHN8 38238495
    813963 8g29:2E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 38238495
    813964 8g29:2F (2.55) BS01 rna ? GO:0003735 ... Q5SHN9 38238495
    813965 8g29:2F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 38238495
    813966 8g29:2F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 38238495
    813967 8g29:2F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 38238495
    813968 8g29:2F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 38238495
    813969 8g29:2G (2.55) BS01 rna ? GO:0000049 ... Q5SHQ0 38238495
    813970 8g29:2G (2.55) BS02 rna ? GO:0000049 ... Q5SHQ0 38238495
    813971 8g29:2G (2.55) BS03 rna ? GO:0000049 ... Q5SHQ0 38238495
    813972 8g29:2G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 38238495
    813973 8g29:2H (2.55) BS01 rna ? GO:0002181 ... P0DOY8 38238495
    813974 8g29:2I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    813975 8g29:2N (2.55) BS01 rna ? GO:0003729 ... P60488 38238495
    813976 8g29:2O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    813977 8g29:2O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    813978 8g29:2P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    813979 8g29:2Q (2.55) BS01 rna ? GO:0003735 ... P60489 38238495
    813980 8g29:2Q (2.55) BS02 rna ? GO:0003735 ... P60489 38238495
    813981 8g29:2Q (2.55) BS03 rna ? GO:0003735 ... P60489 38238495
    813982 8g29:2Q (2.55) BS04 rna ? GO:0003735 ... P60489 38238495
    813983 8g29:2Q (2.55) BS05 MG ? GO:0003735 ... P60489 38238495
    813984 8g29:2Q (2.55) BS06 MG ? GO:0003735 ... P60489 38238495
    813985 8g29:2R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    813986 8g29:2S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    813987 8g29:2S (2.55) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    813988 8g29:2T (2.55) BS01 rna ? GO:0003735 ... P60490 38238495
    813989 8g29:2T (2.55) BS02 rna ? GO:0003735 ... P60490 38238495
    813990 8g29:2U (2.55) BS01 rna ? GO:0000027 ... P60491 38238495
    813991 8g29:2U (2.55) BS02 MG ? GO:0000027 ... P60491 38238495
    813992 8g29:2V (2.55) BS01 rna ? GO:0003723 ... P60492 38238495
    813993 8g29:2W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    813994 8g29:2W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    813995 8g29:2W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 38238495
    813996 8g29:2X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    813997 8g29:2X (2.55) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    813998 8g29:2Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    813999 8g29:2Y (2.55) BS02 ZN ? GO:0003723 ... Q5SHP9 38238495
    814000 8g29:2Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).