SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    813801 8g8f:B (2.6) BS01 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813802 8g8f:B (2.6) BS02 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813803 8g8f:B (2.6) BS03 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813804 8g8f:B (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813805 8g8f:C (2.6) BS01 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813806 8g8f:C (2.6) BS02 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813807 8g8f:C (2.6) BS03 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813808 8g8f:C (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813809 8g8f:D (2.6) BS01 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813810 8g8f:D (2.6) BS02 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813811 8g8f:D (2.6) BS03 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813812 8g8f:D (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813813 8g8f:E (2.6) BS01 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813814 8g8f:E (2.6) BS02 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813815 8g8f:E (2.6) BS03 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813816 8g8f:E (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813817 8g8f:F (2.6) BS01 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813818 8g8f:F (2.6) BS02 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813819 8g8f:F (2.6) BS03 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813820 8g8f:F (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813821 8g8f:G (2.6) BS01 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813822 8g8f:G (2.6) BS02 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813823 8g8f:G (2.6) BS03 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813824 8g8f:G (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813825 8g8f:H (2.6) BS01 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813826 8g8f:H (2.6) BS02 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813827 8g8f:H (2.6) BS03 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813828 8g8f:H (2.6) BS04 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813829 8g8g:A (3.2) BS01 dna ? GO:0000786 ... P84233 37225990
    813830 8g8g:A (3.2) BS02 dna ? GO:0000786 ... P84233 37225990
    813831 8g8g:B (3.2) BS01 dna ? GO:0000786 ... P62799 37225990
    813832 8g8g:B (3.2) BS02 dna ? GO:0000786 ... P62799 37225990
    813833 8g8g:C (3.2) BS01 dna ? GO:0000786 ... Q6AZJ8 37225990
    813834 8g8g:C (3.2) BS02 dna ? GO:0000786 ... Q6AZJ8 37225990
    813835 8g8g:D (3.2) BS01 dna ? GO:0000786 ... P02281 37225990
    813836 8g8g:D (3.2) BS02 dna ? GO:0000786 ... P02281 37225990
    813837 8g8g:E (3.2) BS01 dna ? GO:0000786 ... P84233 37225990
    813838 8g8g:E (3.2) BS02 dna ? GO:0000786 ... P84233 37225990
    813839 8g8g:F (3.2) BS01 dna ? GO:0000786 ... P62799 37225990
    813840 8g8g:F (3.2) BS02 dna ? GO:0000786 ... P62799 37225990
    813841 8g8g:G (3.2) BS01 dna ? GO:0000786 ... Q6AZJ8 37225990
    813842 8g8g:G (3.2) BS02 dna ? GO:0000786 ... Q6AZJ8 37225990
    813843 8g8g:H (3.2) BS01 dna ? GO:0000786 ... P02281 37225990
    813844 8g8g:H (3.2) BS02 dna ? GO:0000786 ... P02281 37225990
    813845 8g8g:X (3.2) BS01 dna ? GO:0000122 ... Q01860 37225990
    813846 8g8g:X (3.2) BS02 dna ? GO:0000122 ... Q01860 37225990
    813847 8g8h:A (1.64) BS01 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    813848 8g8h:A (1.64) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    813849 8g8h:A (1.64) BS03 CZU 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    813850 8g8h:A (1.64) BS04 CA 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    813851 8g8j:A (1.74) BS01 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    813852 8g8j:A (1.74) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    813853 8g8j:A (1.74) BS03 CZU 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    813854 8g8j:A (1.74) BS04 CA 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    813855 8g8n:A (3.0) BS01 peptide N/A N/A N/A 38164757
    813856 8g8n:D (3.0) BS01 peptide N/A N/A N/A 38164757
    813857 8g8n:E (3.0) BS01 peptide N/A N/A N/A 38164757
    813858 8g8n:E (3.0) BS02 peptide N/A N/A N/A 38164757
    813859 8g8n:G (3.0) BS01 peptide N/A N/A N/A 38164757
    813860 8g8n:H (3.0) BS01 peptide N/A N/A N/A 38164757
    813861 8g8n:I (3.0) BS01 peptide N/A N/A N/A 38164757
    813862 8g8n:K (3.0) BS01 peptide N/A N/A N/A 38164757
    813863 8g8n:L (3.0) BS01 peptide N/A N/A N/A 38164757
    813864 8g8n:O (3.0) BS01 peptide N/A N/A N/A 38164757
    813865 8g8n:Q (3.0) BS01 peptide N/A N/A N/A 38164757
    813866 8g8o:A (2.2) BS01 YT0 2.7.10.2 GO:0004672 ... O60674 37314941
    813867 8g8o:B (2.2) BS01 YT0 2.7.10.2 GO:0004672 ... O60674 37314941
    813868 8g8p:AAA (1.83) BS01 F42 6.3.2.31
    6.3.2.34
    GO:0005525 ... O28028 38346985
    813869 8g8p:AAA (1.83) BS02 GTP 6.3.2.31
    6.3.2.34
    GO:0005525 ... O28028 38346985
    813870 8g8p:AAA (1.83) BS03 GDP 6.3.2.31
    6.3.2.34
    GO:0005525 ... O28028 38346985
    813871 8g8p:AAA (1.83) BS04 MN 6.3.2.31
    6.3.2.34
    GO:0005525 ... O28028 38346985
    813872 8g8p:AAA (1.83) BS05 MN 6.3.2.31
    6.3.2.34
    GO:0005525 ... O28028 38346985
    813873 8g8p:AAA (1.83) BS06 MN 6.3.2.31
    6.3.2.34
    GO:0005525 ... O28028 38346985
    813874 8g8q:A (2.6) BS01 peptide ? GO:0005737 ... P52293 N/A
    813875 8g8q:A (2.6) BS02 peptide ? GO:0005737 ... P52293 N/A
    813876 8g8r:A (2.6) BS01 peptide ? GO:0005737 ... P52293 N/A
    813877 8g8s:A (2.1) BS01 peptide ? GO:0005737 ... P52293 N/A
    813878 8g8v:A (2.03) BS01 SO3 3.5.4.16 GO:0003933 ... Q63JF5 39495920
    813879 8g8v:A (2.03) BS02 SO3 3.5.4.16 GO:0003933 ... Q63JF5 39495920
    813880 8g8v:B (2.03) BS01 SO3 3.5.4.16 GO:0003933 ... Q63JF5 39495920
    813881 8g8v:B (2.03) BS02 SO3 3.5.4.16 GO:0003933 ... Q63JF5 39495920
    813882 8g8v:B (2.03) BS03 SO3 3.5.4.16 GO:0003933 ... Q63JF5 39495920
    813883 8g8w:A (3.8) BS01 GTP ? GO:0002024 ... P25874 37256948
    813884 8g8w:B (3.8) BS01 GLC ? GO:0005515 ... P0AEX9 37256948
    813885 8g8x:A (1.97) BS01 YT8 2.7.10.2 GO:0004672 ... O60674 37314941
    813886 8g8x:B (1.97) BS01 YT8 2.7.10.2 GO:0004672 ... O60674 37314941
    813887 8g8z:I (4.3) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 37264140
    813888 8g8z:I (4.3) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 37264140
    813889 8g8z:I (4.3) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 37264140
    813890 8g8z:J (4.3) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 37264140
    813891 8g8z:J (4.3) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 37264140
    813892 8g8z:J (4.3) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 37264140
    813893 8g8z:J (4.3) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 37264140
    813894 8g90:A (1.2) BS01 rna ? N/A Q6PKG0 39016322
    813895 8g91:A (1.2) BS01 rna ? N/A Q6PKG0 39016322
    813896 8g92:A (3.6) BS01 YUX ? GO:0022857 ... Q8IVW8 37224812
    813897 8g93:A (1.91) BS01 NAD ? GO:0000166 ... A0A8I3RYU0 37620305
    813898 8g93:A (1.91) BS02 YXW ? GO:0000166 ... A0A8I3RYU0 37620305
    813899 8g93:B (1.91) BS01 NAD ? GO:0000166 ... A0A8I3RYU0 37620305
    813900 8g93:B (1.91) BS02 YXW ? GO:0000166 ... A0A8I3RYU0 37620305
    813901 8g94:A (3.15) BS01 peptide ? GO:0001525 ... P21453 37039481
    813902 8g96:A (2.3) BS01 ORN ? N/A A0A5K6CNB8 37752201
    813903 8g96:B (2.3) BS01 ORN ? N/A A0A5K6CNB8 37752201
    813904 8g97:A (2.51) BS01 ORD ? N/A A0A5K6CNB8 37752201
    813905 8g97:B (2.51) BS01 ORD ? N/A A0A5K6CNB8 37752201
    813906 8g98:A (2.49) BS01 LYS ? N/A A0A5K6CNB8 37752201
    813907 8g99:A (2.8) BS01 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813908 8g99:A (2.8) BS02 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813909 8g99:C (2.8) BS01 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    813910 8g9b:A (3.0) BS01 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813911 8g9b:A (3.0) BS02 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813912 8g9b:A (3.0) BS03 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813913 8g9b:A (3.0) BS04 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813914 8g9b:A (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813915 8g9b:B (3.0) BS01 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813916 8g9b:B (3.0) BS02 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813917 8g9b:B (3.0) BS03 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813918 8g9b:B (3.0) BS04 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813919 8g9b:B (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813920 8g9b:C (3.0) BS01 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813921 8g9b:C (3.0) BS02 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813922 8g9b:C (3.0) BS03 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813923 8g9b:C (3.0) BS04 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813924 8g9b:C (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813925 8g9b:D (3.0) BS01 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813926 8g9b:D (3.0) BS02 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813927 8g9b:D (3.0) BS03 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813928 8g9b:D (3.0) BS04 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813929 8g9b:D (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813930 8g9b:E (3.0) BS01 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813931 8g9b:E (3.0) BS02 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813932 8g9b:E (3.0) BS03 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813933 8g9b:E (3.0) BS04 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813934 8g9b:E (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813935 8g9b:F (3.0) BS01 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813936 8g9b:F (3.0) BS02 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813937 8g9b:F (3.0) BS03 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813938 8g9b:F (3.0) BS04 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813939 8g9b:F (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813940 8g9b:G (3.0) BS01 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813941 8g9b:G (3.0) BS02 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813942 8g9b:G (3.0) BS03 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813943 8g9b:G (3.0) BS04 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813944 8g9b:G (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813945 8g9b:H (3.0) BS01 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813946 8g9b:H (3.0) BS02 GTP 1.1.1.205 GO:0000166 ... P12268 37414152
    813947 8g9b:H (3.0) BS03 ATP 1.1.1.205 GO:0000166 ... P12268 37414152
    813948 8g9b:H (3.0) BS04 IMP 1.1.1.205 GO:0000166 ... P12268 37414152
    813949 8g9b:H (3.0) BS05 NAD 1.1.1.205 GO:0000166 ... P12268 37414152
    813950 8g9c:A (1.4) BS01 YUT 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0000287 ... O95989 37773020
    813951 8g9c:A (1.4) BS02 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0000287 ... O95989 37773020
    813952 8g9c:A (1.4) BS03 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0000287 ... O95989 37773020
    813953 8g9d:A (1.6) BS01 KDJ 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0000287 ... O95989 37773020
    813954 8g9e:A (1.75) BS01 ANP 2.7.4.24 GO:0000829 ... O43314 37773020
    813955 8g9e:A (1.75) BS02 YUT 2.7.4.24 GO:0000829 ... O43314 37773020
    813956 8g9e:A (1.75) BS03 MG 2.7.4.24 GO:0000829 ... O43314 37773020
    813957 8g9e:A (1.75) BS04 MG 2.7.4.24 GO:0000829 ... O43314 37773020
    813958 8g9e:A (1.75) BS05 MG 2.7.4.24 GO:0000829 ... O43314 37773020
    813959 8g9f:A (3.2) BS01 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813960 8g9f:A (3.2) BS02 ZN 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813961 8g9f:C (3.2) BS01 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    813962 8g9f:D (3.2) BS01 ZN 2.7.7.- GO:0000428 ... Q800A4 38491139
    813963 8g9l:A (3.3) BS01 dna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813964 8g9l:A (3.3) BS02 rna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813965 8g9l:A (3.3) BS03 DGT 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813966 8g9l:A (3.3) BS04 MG 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813967 8g9l:B (3.3) BS01 dna ? GO:0003677 ... A0A1L8G3G3 38491139
    813968 8g9l:B (3.3) BS02 rna ? GO:0003677 ... A0A1L8G3G3 38491139
    813969 8g9l:B (3.3) BS03 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    813970 8g9n:A (3.5) BS01 dna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813971 8g9n:A (3.5) BS02 dna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813972 8g9n:A (3.5) BS03 DGT 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813973 8g9n:A (3.5) BS04 MG 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813974 8g9o:A (4.4) BS01 dna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813975 8g9o:A (4.4) BS02 dna 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813976 8g9o:A (4.4) BS03 DGT 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813977 8g9o:A (4.4) BS04 MG 2.7.7.7 GO:0000166 ... Q9DE46 38491139
    813978 8g9o:B (4.4) BS01 dna ? GO:0003677 ... A0A1L8G3G3 38491139
    813979 8g9o:B (4.4) BS02 dna ? GO:0003677 ... A0A1L8G3G3 38491139
    813980 8g9o:B (4.4) BS03 SF4 ? GO:0003677 ... A0A1L8G3G3 38491139
    813981 8g9p:A (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 37590355
    813982 8g9p:A (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 37590355
    813983 8g9p:A (1.5) BS03 YV2 3.6.5.2 GO:0003924 ... P01116 37590355
    813984 8g9p:B (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 37590355
    813985 8g9p:B (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 37590355
    813986 8g9p:B (1.5) BS03 YV2 3.6.5.2 GO:0003924 ... P01116 37590355
    813987 8g9p:C (1.5) BS01 YV2 5.2.1.8 GO:0000413 ... P62937 37590355
    813988 8g9p:D (1.5) BS01 YV2 5.2.1.8 GO:0000413 ... P62937 37590355
    813989 8g9q:A (1.4) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 37590355
    813990 8g9q:A (1.4) BS02 MG 3.6.5.2 GO:0003924 ... P01116 37590355
    813991 8g9q:A (1.4) BS03 YV6 3.6.5.2 GO:0003924 ... P01116 37590355
    813992 8g9q:D (1.4) BS01 YV6 5.2.1.8 GO:0000413 ... P62937 37590355
    813993 8g9s:A (3.4) BS01 rna N/A N/A N/A 38242128
    813994 8g9s:B (3.4) BS01 rna ? GO:0043571 ... D0W8X6 38242128
    813995 8g9s:C (3.4) BS01 rna ? GO:0043571 ... D0W8X6 38242128
    813996 8g9s:D (3.4) BS01 rna ? GO:0043571 ... D0W8X6 38242128
    813997 8g9s:E (3.4) BS01 rna ? GO:0043571 ... D0W8X6 38242128
    813998 8g9s:F (3.4) BS01 rna ? GO:0043571 ... D0W8X6 38242128
    813999 8g9s:G (3.4) BS01 rna ? GO:0043571 ... D0W8X6 38242128
    814000 8g9s:K (3.4) BS01 rna ? N/A D0W8X5 38242128

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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