SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    814401 8g2b:1S (2.55) BS03 MG ? GO:0003735 ... Q5SHQ4 38238495
    814402 8g2b:1S (2.55) BS04 MG ? GO:0003735 ... Q5SHQ4 38238495
    814403 8g2b:1T (2.55) BS01 rna ? GO:0003735 ... P60490 38238495
    814404 8g2b:1T (2.55) BS02 rna ? GO:0003735 ... P60490 38238495
    814405 8g2b:1U (2.55) BS01 rna ? GO:0000027 ... P60491 38238495
    814406 8g2b:1U (2.55) BS02 MG ? GO:0000027 ... P60491 38238495
    814407 8g2b:1U (2.55) BS03 MG ? GO:0000027 ... P60491 38238495
    814408 8g2b:1U (2.55) BS04 MG ? GO:0000027 ... P60491 38238495
    814409 8g2b:1U (2.55) BS05 MG ? GO:0000027 ... P60491 38238495
    814410 8g2b:1U (2.55) BS06 MG ? GO:0000027 ... P60491 38238495
    814411 8g2b:1U (2.55) BS07 MG ? GO:0000027 ... P60491 38238495
    814412 8g2b:1U (2.55) BS08 MG ? GO:0000027 ... P60491 38238495
    814413 8g2b:1U (2.55) BS09 MG ? GO:0000027 ... P60491 38238495
    814414 8g2b:1V (2.55) BS01 rna ? GO:0003723 ... P60492 38238495
    814415 8g2b:1V (2.55) BS02 MG ? GO:0003723 ... P60492 38238495
    814416 8g2b:1V (2.55) BS03 MG ? GO:0003723 ... P60492 38238495
    814417 8g2b:1V (2.55) BS04 MG ? GO:0003723 ... P60492 38238495
    814418 8g2b:1V (2.55) BS05 MG ? GO:0003723 ... P60492 38238495
    814419 8g2b:1V (2.55) BS06 MG ? GO:0003723 ... P60492 38238495
    814420 8g2b:1W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    814421 8g2b:1W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    814422 8g2b:1W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 38238495
    814423 8g2b:1W (2.55) BS04 MG ? GO:0003735 ... Q5SHP3 38238495
    814424 8g2b:1W (2.55) BS05 MG ? GO:0003735 ... Q5SHP3 38238495
    814425 8g2b:1X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    814426 8g2b:1X (2.55) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    814427 8g2b:1X (2.55) BS03 MG ? GO:0003735 ... Q5SHP0 38238495
    814428 8g2b:1X (2.55) BS04 MG ? GO:0003735 ... Q5SHP0 38238495
    814429 8g2b:1X (2.55) BS05 MG ? GO:0003735 ... Q5SHP0 38238495
    814430 8g2b:1X (2.55) BS06 MG ? GO:0003735 ... Q5SHP0 38238495
    814431 8g2b:1Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    814432 8g2b:1Y (2.55) BS02 MG ? GO:0003723 ... Q5SHP9 38238495
    814433 8g2b:1Y (2.55) BS03 ZN ? GO:0003723 ... Q5SHP9 38238495
    814434 8g2b:1Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    814435 8g2b:1Z (2.55) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    814436 8g2b:1b (2.55) BS01 rna ? GO:0003735 ... P80371 38238495
    814437 8g2b:1c (2.55) BS01 rna ? GO:0003676 ... P80372 38238495
    814438 8g2b:1d (2.55) BS01 rna ? GO:0003723 ... P80373 38238495
    814439 8g2b:1d (2.55) BS02 SF4 ? GO:0003723 ... P80373 38238495
    814440 8g2b:1e (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    814441 8g2b:1e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    814442 8g2b:1e (2.55) BS03 MG ? GO:0003723 ... Q5SHQ5 38238495
    814443 8g2b:1f (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    814444 8g2b:1f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 38238495
    814445 8g2b:1g (2.55) BS01 rna ? GO:0000049 ... P17291 38238495
    814446 8g2b:1g (2.55) BS02 rna ? GO:0000049 ... P17291 38238495
    814447 8g2b:1h (2.55) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    814448 8g2b:1i (2.55) BS01 rna ? GO:0003723 ... P80374 38238495
    814449 8g2b:1i (2.55) BS02 rna ? GO:0003723 ... P80374 38238495
    814450 8g2b:1j (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    814451 8g2b:1k (2.55) BS01 rna ? GO:0003735 ... P80376 38238495
    814452 8g2b:1k (2.55) BS02 MG ? GO:0003735 ... P80376 38238495
    814453 8g2b:1l (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    814454 8g2b:1l (2.55) BS02 rna ? GO:0000049 ... Q5SHN3 38238495
    814455 8g2b:1l (2.55) BS03 MG ? GO:0000049 ... Q5SHN3 38238495
    814456 8g2b:1m (2.55) BS01 rna ? GO:0000049 ... P80377 38238495
    814457 8g2b:1m (2.55) BS02 rna ? GO:0000049 ... P80377 38238495
    814458 8g2b:1m (2.55) BS03 rna ? GO:0000049 ... P80377 38238495
    814459 8g2b:1m (2.55) BS04 MG ? GO:0000049 ... P80377 38238495
    814460 8g2b:1n (2.55) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    814461 8g2b:1n (2.55) BS02 MG ? GO:0003735 ... P0DOY6 38238495
    814462 8g2b:1n (2.55) BS03 ZN ? GO:0003735 ... P0DOY6 38238495
    814463 8g2b:1o (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    814464 8g2b:1o (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    814465 8g2b:1p (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    814466 8g2b:1q (2.55) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    814467 8g2b:1r (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    814468 8g2b:1s (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    814469 8g2b:1t (2.55) BS01 rna ? GO:0003723 ... P80380 38238495
    814470 8g2b:1t (2.55) BS02 MG ? GO:0003723 ... P80380 38238495
    814471 8g2b:20 (2.55) BS01 rna ? GO:0003735 ... P60493 38238495
    814472 8g2b:20 (2.55) BS02 rna ? GO:0003735 ... P60493 38238495
    814473 8g2b:20 (2.55) BS03 rna ? GO:0003735 ... P60493 38238495
    814474 8g2b:21 (2.55) BS01 rna ? GO:0003735 ... P60494 38238495
    814475 8g2b:21 (2.55) BS02 MG ? GO:0003735 ... P60494 38238495
    814476 8g2b:22 (2.55) BS01 rna ? GO:0003735 ... Q5SHP6 38238495
    814477 8g2b:23 (2.55) BS01 rna ? GO:0003735 ... Q5SHQ6 38238495
    814478 8g2b:23 (2.55) BS02 rna ? GO:0003735 ... Q5SHQ6 38238495
    814479 8g2b:23 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 38238495
    814480 8g2b:24 (2.55) BS01 rna ? GO:0003735 ... Q5SJE1 38238495
    814481 8g2b:24 (2.55) BS02 ZN ? GO:0003735 ... Q5SJE1 38238495
    814482 8g2b:25 (2.55) BS01 rna ? GO:0003735 ... P80339 38238495
    814483 8g2b:25 (2.55) BS02 MG ? GO:0003735 ... P80339 38238495
    814484 8g2b:25 (2.55) BS03 ZN ? GO:0003735 ... P80339 38238495
    814485 8g2b:26 (2.55) BS01 rna ? GO:0003735 ... P35871 38238495
    814486 8g2b:26 (2.55) BS02 MG ? GO:0003735 ... P35871 38238495
    814487 8g2b:26 (2.55) BS03 ZN ? GO:0003735 ... P35871 38238495
    814488 8g2b:27 (2.55) BS01 rna ? GO:0003735 ... P80340 38238495
    814489 8g2b:27 (2.55) BS02 MG ? GO:0003735 ... P80340 38238495
    814490 8g2b:28 (2.55) BS01 rna ? GO:0003735 ... Q5SKU1 38238495
    814491 8g2b:29 (2.55) BS01 rna ? GO:0003735 ... Q5SHR2 38238495
    814492 8g2b:29 (2.55) BS02 MG ? GO:0003735 ... Q5SHR2 38238495
    814493 8g2b:29 (2.55) BS03 ZN ? GO:0003735 ... Q5SHR2 38238495
    814494 8g2b:2D (2.55) BS01 rna ? GO:0002181 ... P60405 38238495
    814495 8g2b:2D (2.55) BS02 rna ? GO:0002181 ... P60405 38238495
    814496 8g2b:2D (2.55) BS03 MG ? GO:0002181 ... P60405 38238495
    814497 8g2b:2D (2.55) BS04 MG ? GO:0002181 ... P60405 38238495
    814498 8g2b:2D (2.55) BS05 MG ? GO:0002181 ... P60405 38238495
    814499 8g2b:2D (2.55) BS06 MG ? GO:0002181 ... P60405 38238495
    814500 8g2b:2E (2.55) BS01 rna ? GO:0003735 ... Q5SHN8 38238495
    814501 8g2b:2E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 38238495
    814502 8g2b:2F (2.55) BS01 rna ? GO:0003735 ... Q5SHN9 38238495
    814503 8g2b:2F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 38238495
    814504 8g2b:2F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 38238495
    814505 8g2b:2F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 38238495
    814506 8g2b:2F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 38238495
    814507 8g2b:2G (2.55) BS01 rna ? GO:0000049 ... Q5SHQ0 38238495
    814508 8g2b:2G (2.55) BS02 rna ? GO:0000049 ... Q5SHQ0 38238495
    814509 8g2b:2G (2.55) BS03 rna ? GO:0000049 ... Q5SHQ0 38238495
    814510 8g2b:2G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 38238495
    814511 8g2b:2H (2.55) BS01 rna ? GO:0002181 ... P0DOY8 38238495
    814512 8g2b:2I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    814513 8g2b:2N (2.55) BS01 rna ? GO:0003729 ... P60488 38238495
    814514 8g2b:2O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    814515 8g2b:2O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    814516 8g2b:2P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    814517 8g2b:2Q (2.55) BS01 rna ? GO:0003735 ... P60489 38238495
    814518 8g2b:2Q (2.55) BS02 rna ? GO:0003735 ... P60489 38238495
    814519 8g2b:2Q (2.55) BS03 rna ? GO:0003735 ... P60489 38238495
    814520 8g2b:2Q (2.55) BS04 MG ? GO:0003735 ... P60489 38238495
    814521 8g2b:2Q (2.55) BS05 MG ? GO:0003735 ... P60489 38238495
    814522 8g2b:2Q (2.55) BS06 MG ? GO:0003735 ... P60489 38238495
    814523 8g2b:2R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    814524 8g2b:2S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    814525 8g2b:2S (2.55) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    814526 8g2b:2T (2.55) BS01 rna ? GO:0003735 ... P60490 38238495
    814527 8g2b:2T (2.55) BS02 rna ? GO:0003735 ... P60490 38238495
    814528 8g2b:2T (2.55) BS03 MG ? GO:0003735 ... P60490 38238495
    814529 8g2b:2U (2.55) BS01 rna ? GO:0000027 ... P60491 38238495
    814530 8g2b:2U (2.55) BS02 MG ? GO:0000027 ... P60491 38238495
    814531 8g2b:2V (2.55) BS01 rna ? GO:0003723 ... P60492 38238495
    814532 8g2b:2V (2.55) BS02 MG ? GO:0003723 ... P60492 38238495
    814533 8g2b:2W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    814534 8g2b:2W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    814535 8g2b:2X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    814536 8g2b:2X (2.55) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    814537 8g2b:2Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    814538 8g2b:2Y (2.55) BS02 ZN ? GO:0003723 ... Q5SHP9 38238495
    814539 8g2b:2Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    814540 8g2b:2Z (2.55) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    814541 8g2b:2b (2.55) BS01 rna ? GO:0003735 ... P80371 38238495
    814542 8g2b:2c (2.55) BS01 rna ? GO:0003676 ... P80372 38238495
    814543 8g2b:2d (2.55) BS01 rna ? GO:0003723 ... P80373 38238495
    814544 8g2b:2d (2.55) BS02 MG ? GO:0003723 ... P80373 38238495
    814545 8g2b:2d (2.55) BS03 SF4 ? GO:0003723 ... P80373 38238495
    814546 8g2b:2e (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    814547 8g2b:2e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    814548 8g2b:2f (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    814549 8g2b:2f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 38238495
    814550 8g2b:2g (2.55) BS01 rna ? GO:0000049 ... P17291 38238495
    814551 8g2b:2g (2.55) BS02 rna ? GO:0000049 ... P17291 38238495
    814552 8g2b:2h (2.55) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    814553 8g2b:2i (2.55) BS01 rna ? GO:0003723 ... P80374 38238495
    814554 8g2b:2j (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    814555 8g2b:2k (2.55) BS01 rna ? GO:0003735 ... P80376 38238495
    814556 8g2b:2k (2.55) BS02 MG ? GO:0003735 ... P80376 38238495
    814557 8g2b:2l (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    814558 8g2b:2l (2.55) BS02 rna ? GO:0000049 ... Q5SHN3 38238495
    814559 8g2b:2l (2.55) BS03 MG ? GO:0000049 ... Q5SHN3 38238495
    814560 8g2b:2l (2.55) BS04 MG ? GO:0000049 ... Q5SHN3 38238495
    814561 8g2b:2l (2.55) BS05 MG ? GO:0000049 ... Q5SHN3 38238495
    814562 8g2b:2m (2.55) BS01 rna ? GO:0000049 ... P80377 38238495
    814563 8g2b:2m (2.55) BS02 rna ? GO:0000049 ... P80377 38238495
    814564 8g2b:2n (2.55) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    814565 8g2b:2n (2.55) BS02 ZN ? GO:0003735 ... P0DOY6 38238495
    814566 8g2b:2o (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    814567 8g2b:2o (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    814568 8g2b:2p (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    814569 8g2b:2q (2.55) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    814570 8g2b:2q (2.55) BS02 MG ? GO:0003735 ... P0DOY7 38238495
    814571 8g2b:2q (2.55) BS03 MG ? GO:0003735 ... P0DOY7 38238495
    814572 8g2b:2r (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    814573 8g2b:2s (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    814574 8g2b:2t (2.55) BS01 rna ? GO:0003723 ... P80380 38238495
    814575 8g2b:2t (2.55) BS02 MG ? GO:0003723 ... P80380 38238495
    814576 8g2c:10 (2.65) BS01 rna ? GO:0003735 ... P60493 38238495
    814577 8g2c:10 (2.65) BS02 rna ? GO:0003735 ... P60493 38238495
    814578 8g2c:10 (2.65) BS03 rna ? GO:0003735 ... P60493 38238495
    814579 8g2c:10 (2.65) BS04 MG ? GO:0003735 ... P60493 38238495
    814580 8g2c:10 (2.65) BS05 MG ? GO:0003735 ... P60493 38238495
    814581 8g2c:10 (2.65) BS06 MG ? GO:0003735 ... P60493 38238495
    814582 8g2c:11 (2.65) BS01 rna ? GO:0003735 ... P60494 38238495
    814583 8g2c:11 (2.65) BS02 rna ? GO:0003735 ... P60494 38238495
    814584 8g2c:11 (2.65) BS03 MG ? GO:0003735 ... P60494 38238495
    814585 8g2c:12 (2.65) BS01 rna ? GO:0003735 ... Q5SHP6 38238495
    814586 8g2c:12 (2.65) BS02 MG ? GO:0003735 ... Q5SHP6 38238495
    814587 8g2c:13 (2.65) BS01 rna ? GO:0003735 ... Q5SHQ6 38238495
    814588 8g2c:13 (2.65) BS02 rna ? GO:0003735 ... Q5SHQ6 38238495
    814589 8g2c:13 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 38238495
    814590 8g2c:13 (2.65) BS04 MG ? GO:0003735 ... Q5SHQ6 38238495
    814591 8g2c:14 (2.65) BS01 rna ? GO:0003735 ... Q5SJE1 38238495
    814592 8g2c:14 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 38238495
    814593 8g2c:15 (2.65) BS01 rna ? GO:0003735 ... P80339 38238495
    814594 8g2c:15 (2.65) BS02 MG ? GO:0003735 ... P80339 38238495
    814595 8g2c:15 (2.65) BS03 ZN ? GO:0003735 ... P80339 38238495
    814596 8g2c:16 (2.65) BS01 rna ? GO:0003735 ... P35871 38238495
    814597 8g2c:16 (2.65) BS02 MG ? GO:0003735 ... P35871 38238495
    814598 8g2c:16 (2.65) BS03 ZN ? GO:0003735 ... P35871 38238495
    814599 8g2c:17 (2.65) BS01 rna ? GO:0003735 ... P80340 38238495
    814600 8g2c:17 (2.65) BS02 MG ? GO:0003735 ... P80340 38238495

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).