SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    814801 8g2c:2W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    814802 8g2c:2X (2.65) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    814803 8g2c:2X (2.65) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    814804 8g2c:2Y (2.65) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    814805 8g2c:2Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 38238495
    814806 8g2c:2Z (2.65) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    814807 8g2c:2Z (2.65) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    814808 8g2c:2b (2.65) BS01 rna ? GO:0003735 ... P80371 38238495
    814809 8g2c:2c (2.65) BS01 rna ? GO:0003676 ... P80372 38238495
    814810 8g2c:2d (2.65) BS01 rna ? GO:0003723 ... P80373 38238495
    814811 8g2c:2d (2.65) BS02 MG ? GO:0003723 ... P80373 38238495
    814812 8g2c:2d (2.65) BS03 SF4 ? GO:0003723 ... P80373 38238495
    814813 8g2c:2e (2.65) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    814814 8g2c:2e (2.65) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    814815 8g2c:2f (2.65) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    814816 8g2c:2f (2.65) BS02 MG ? GO:0003735 ... Q5SLP8 38238495
    814817 8g2c:2g (2.65) BS01 rna ? GO:0000049 ... P17291 38238495
    814818 8g2c:2g (2.65) BS02 rna ? GO:0000049 ... P17291 38238495
    814819 8g2c:2h (2.65) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    814820 8g2c:2i (2.65) BS01 rna ? GO:0003723 ... P80374 38238495
    814821 8g2c:2j (2.65) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    814822 8g2c:2k (2.65) BS01 rna ? GO:0003735 ... P80376 38238495
    814823 8g2c:2k (2.65) BS02 MG ? GO:0003735 ... P80376 38238495
    814824 8g2c:2l (2.65) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    814825 8g2c:2l (2.65) BS02 rna ? GO:0000049 ... Q5SHN3 38238495
    814826 8g2c:2m (2.65) BS01 rna ? GO:0000049 ... P80377 38238495
    814827 8g2c:2m (2.65) BS02 rna ? GO:0000049 ... P80377 38238495
    814828 8g2c:2n (2.65) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    814829 8g2c:2n (2.65) BS02 ZN ? GO:0003735 ... P0DOY6 38238495
    814830 8g2c:2o (2.65) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    814831 8g2c:2o (2.65) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    814832 8g2c:2p (2.65) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    814833 8g2c:2q (2.65) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    814834 8g2c:2q (2.65) BS02 MG ? GO:0003735 ... P0DOY7 38238495
    814835 8g2c:2q (2.65) BS03 MG ? GO:0003735 ... P0DOY7 38238495
    814836 8g2c:2r (2.65) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    814837 8g2c:2s (2.65) BS01 rna ? GO:0000028 ... Q5SHP2 38238495
    814838 8g2c:2t (2.65) BS01 rna ? GO:0003723 ... P80380 38238495
    814839 8g2d:10 (2.7) BS01 rna ? GO:0003735 ... P60493 38238495
    814840 8g2d:10 (2.7) BS02 rna ? GO:0003735 ... P60493 38238495
    814841 8g2d:10 (2.7) BS03 MG ? GO:0003735 ... P60493 38238495
    814842 8g2d:10 (2.7) BS04 MG ? GO:0003735 ... P60493 38238495
    814843 8g2d:10 (2.7) BS05 MG ? GO:0003735 ... P60493 38238495
    814844 8g2d:11 (2.7) BS01 rna ? GO:0003735 ... P60494 38238495
    814845 8g2d:11 (2.7) BS02 rna ? GO:0003735 ... P60494 38238495
    814846 8g2d:11 (2.7) BS03 MG ? GO:0003735 ... P60494 38238495
    814847 8g2d:12 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 38238495
    814848 8g2d:12 (2.7) BS02 MG ? GO:0003735 ... Q5SHP6 38238495
    814849 8g2d:12 (2.7) BS03 MG ? GO:0003735 ... Q5SHP6 38238495
    814850 8g2d:13 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 38238495
    814851 8g2d:13 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 38238495
    814852 8g2d:13 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 38238495
    814853 8g2d:13 (2.7) BS04 MG ? GO:0003735 ... Q5SHQ6 38238495
    814854 8g2d:14 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 38238495
    814855 8g2d:14 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 38238495
    814856 8g2d:15 (2.7) BS01 rna ? GO:0003735 ... P80339 38238495
    814857 8g2d:15 (2.7) BS02 MG ? GO:0003735 ... P80339 38238495
    814858 8g2d:15 (2.7) BS03 ZN ? GO:0003735 ... P80339 38238495
    814859 8g2d:16 (2.7) BS01 rna ? GO:0003735 ... P35871 38238495
    814860 8g2d:16 (2.7) BS02 MG ? GO:0003735 ... P35871 38238495
    814861 8g2d:16 (2.7) BS03 MG ? GO:0003735 ... P35871 38238495
    814862 8g2d:16 (2.7) BS04 ZN ? GO:0003735 ... P35871 38238495
    814863 8g2d:17 (2.7) BS01 rna ? GO:0003735 ... P80340 38238495
    814864 8g2d:17 (2.7) BS02 MG ? GO:0003735 ... P80340 38238495
    814865 8g2d:17 (2.7) BS03 MG ? GO:0003735 ... P80340 38238495
    814866 8g2d:18 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 38238495
    814867 8g2d:18 (2.7) BS02 MG ? GO:0003735 ... Q5SKU1 38238495
    814868 8g2d:19 (2.7) BS01 rna ? GO:0003735 ... Q5SHR2 38238495
    814869 8g2d:19 (2.7) BS02 ZN ? GO:0003735 ... Q5SHR2 38238495
    814870 8g2d:1D (2.7) BS01 rna ? GO:0002181 ... P60405 38238495
    814871 8g2d:1D (2.7) BS02 rna ? GO:0002181 ... P60405 38238495
    814872 8g2d:1D (2.7) BS03 MG ? GO:0002181 ... P60405 38238495
    814873 8g2d:1D (2.7) BS04 MG ? GO:0002181 ... P60405 38238495
    814874 8g2d:1D (2.7) BS05 MG ? GO:0002181 ... P60405 38238495
    814875 8g2d:1D (2.7) BS06 MG ? GO:0002181 ... P60405 38238495
    814876 8g2d:1D (2.7) BS07 MG ? GO:0002181 ... P60405 38238495
    814877 8g2d:1D (2.7) BS08 MG ? GO:0002181 ... P60405 38238495
    814878 8g2d:1D (2.7) BS09 MG ? GO:0002181 ... P60405 38238495
    814879 8g2d:1D (2.7) BS10 MG ? GO:0002181 ... P60405 38238495
    814880 8g2d:1D (2.7) BS11 MG ? GO:0002181 ... P60405 38238495
    814881 8g2d:1D (2.7) BS12 MG ? GO:0002181 ... P60405 38238495
    814882 8g2d:1E (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 38238495
    814883 8g2d:1E (2.7) BS02 MG ? GO:0003735 ... Q5SHN8 38238495
    814884 8g2d:1E (2.7) BS03 MG ? GO:0003735 ... Q5SHN8 38238495
    814885 8g2d:1E (2.7) BS04 MG ? GO:0003735 ... Q5SHN8 38238495
    814886 8g2d:1E (2.7) BS05 MG ? GO:0003735 ... Q5SHN8 38238495
    814887 8g2d:1E (2.7) BS06 MG ? GO:0003735 ... Q5SHN8 38238495
    814888 8g2d:1F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 38238495
    814889 8g2d:1F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 38238495
    814890 8g2d:1F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 38238495
    814891 8g2d:1F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 38238495
    814892 8g2d:1F (2.7) BS05 MG ? GO:0003735 ... Q5SHN9 38238495
    814893 8g2d:1F (2.7) BS06 MG ? GO:0003735 ... Q5SHN9 38238495
    814894 8g2d:1F (2.7) BS07 MG ? GO:0003735 ... Q5SHN9 38238495
    814895 8g2d:1F (2.7) BS08 MG ? GO:0003735 ... Q5SHN9 38238495
    814896 8g2d:1F (2.7) BS09 MG ? GO:0003735 ... Q5SHN9 38238495
    814897 8g2d:1G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 38238495
    814898 8g2d:1G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 38238495
    814899 8g2d:1G (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 38238495
    814900 8g2d:1G (2.7) BS04 MG ? GO:0000049 ... Q5SHQ0 38238495
    814901 8g2d:1G (2.7) BS05 MG ? GO:0000049 ... Q5SHQ0 38238495
    814902 8g2d:1H (2.7) BS01 rna ? GO:0002181 ... P0DOY8 38238495
    814903 8g2d:1I (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 38238495
    814904 8g2d:1I (2.7) BS02 MG ? GO:0003735 ... Q5SLQ1 38238495
    814905 8g2d:1N (2.7) BS01 rna ? GO:0003729 ... P60488 38238495
    814906 8g2d:1N (2.7) BS02 MG ? GO:0003729 ... P60488 38238495
    814907 8g2d:1N (2.7) BS03 MG ? GO:0003729 ... P60488 38238495
    814908 8g2d:1N (2.7) BS04 MG ? GO:0003729 ... P60488 38238495
    814909 8g2d:1O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 38238495
    814910 8g2d:1O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 38238495
    814911 8g2d:1O (2.7) BS03 MG ? GO:0003735 ... Q5SHP8 38238495
    814912 8g2d:1O (2.7) BS04 MG ? GO:0003735 ... Q5SHP8 38238495
    814913 8g2d:1P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 38238495
    814914 8g2d:1P (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 38238495
    814915 8g2d:1P (2.7) BS03 MG ? GO:0003735 ... Q5SHQ7 38238495
    814916 8g2d:1P (2.7) BS04 MG ? GO:0003735 ... Q5SHQ7 38238495
    814917 8g2d:1P (2.7) BS05 MG ? GO:0003735 ... Q5SHQ7 38238495
    814918 8g2d:1P (2.7) BS06 MG ? GO:0003735 ... Q5SHQ7 38238495
    814919 8g2d:1Q (2.7) BS01 rna ? GO:0003735 ... P60489 38238495
    814920 8g2d:1Q (2.7) BS02 rna ? GO:0003735 ... P60489 38238495
    814921 8g2d:1Q (2.7) BS03 rna ? GO:0003735 ... P60489 38238495
    814922 8g2d:1Q (2.7) BS04 MG ? GO:0003735 ... P60489 38238495
    814923 8g2d:1Q (2.7) BS05 MG ? GO:0003735 ... P60489 38238495
    814924 8g2d:1Q (2.7) BS06 MG ? GO:0003735 ... P60489 38238495
    814925 8g2d:1Q (2.7) BS07 MG ? GO:0003735 ... P60489 38238495
    814926 8g2d:1Q (2.7) BS08 MG ? GO:0003735 ... P60489 38238495
    814927 8g2d:1Q (2.7) BS09 MG ? GO:0003735 ... P60489 38238495
    814928 8g2d:1R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 38238495
    814929 8g2d:1R (2.7) BS02 MG ? GO:0003735 ... Q9Z9H5 38238495
    814930 8g2d:1R (2.7) BS03 MG ? GO:0003735 ... Q9Z9H5 38238495
    814931 8g2d:1R (2.7) BS04 MG ? GO:0003735 ... Q9Z9H5 38238495
    814932 8g2d:1S (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 38238495
    814933 8g2d:1S (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 38238495
    814934 8g2d:1S (2.7) BS03 MG ? GO:0003735 ... Q5SHQ4 38238495
    814935 8g2d:1S (2.7) BS04 MG ? GO:0003735 ... Q5SHQ4 38238495
    814936 8g2d:1T (2.7) BS01 rna ? GO:0003735 ... P60490 38238495
    814937 8g2d:1T (2.7) BS02 rna ? GO:0003735 ... P60490 38238495
    814938 8g2d:1U (2.7) BS01 rna ? GO:0000027 ... P60491 38238495
    814939 8g2d:1U (2.7) BS02 MG ? GO:0000027 ... P60491 38238495
    814940 8g2d:1U (2.7) BS03 MG ? GO:0000027 ... P60491 38238495
    814941 8g2d:1U (2.7) BS04 MG ? GO:0000027 ... P60491 38238495
    814942 8g2d:1U (2.7) BS05 MG ? GO:0000027 ... P60491 38238495
    814943 8g2d:1U (2.7) BS06 MG ? GO:0000027 ... P60491 38238495
    814944 8g2d:1U (2.7) BS07 MG ? GO:0000027 ... P60491 38238495
    814945 8g2d:1U (2.7) BS08 MG ? GO:0000027 ... P60491 38238495
    814946 8g2d:1V (2.7) BS01 rna ? GO:0003723 ... P60492 38238495
    814947 8g2d:1V (2.7) BS02 MG ? GO:0003723 ... P60492 38238495
    814948 8g2d:1V (2.7) BS03 MG ? GO:0003723 ... P60492 38238495
    814949 8g2d:1V (2.7) BS04 MG ? GO:0003723 ... P60492 38238495
    814950 8g2d:1V (2.7) BS05 MG ? GO:0003723 ... P60492 38238495
    814951 8g2d:1W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 38238495
    814952 8g2d:1W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 38238495
    814953 8g2d:1W (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 38238495
    814954 8g2d:1W (2.7) BS04 MG ? GO:0003735 ... Q5SHP3 38238495
    814955 8g2d:1W (2.7) BS05 MG ? GO:0003735 ... Q5SHP3 38238495
    814956 8g2d:1W (2.7) BS06 MG ? GO:0003735 ... Q5SHP3 38238495
    814957 8g2d:1X (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 38238495
    814958 8g2d:1X (2.7) BS02 MG ? GO:0003735 ... Q5SHP0 38238495
    814959 8g2d:1X (2.7) BS03 MG ? GO:0003735 ... Q5SHP0 38238495
    814960 8g2d:1X (2.7) BS04 MG ? GO:0003735 ... Q5SHP0 38238495
    814961 8g2d:1X (2.7) BS05 MG ? GO:0003735 ... Q5SHP0 38238495
    814962 8g2d:1X (2.7) BS06 MG ? GO:0003735 ... Q5SHP0 38238495
    814963 8g2d:1Y (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 38238495
    814964 8g2d:1Y (2.7) BS02 MG ? GO:0003723 ... Q5SHP9 38238495
    814965 8g2d:1Y (2.7) BS03 ZN ? GO:0003723 ... Q5SHP9 38238495
    814966 8g2d:1Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 38238495
    814967 8g2d:1Z (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 38238495
    814968 8g2d:1Z (2.7) BS03 MG ? GO:0003723 ... Q5SHZ1 38238495
    814969 8g2d:1b (2.7) BS01 rna ? GO:0003735 ... P80371 38238495
    814970 8g2d:1b (2.7) BS02 MG ? GO:0003735 ... P80371 38238495
    814971 8g2d:1c (2.7) BS01 rna ? GO:0003676 ... P80372 38238495
    814972 8g2d:1d (2.7) BS01 rna ? GO:0003723 ... P80373 38238495
    814973 8g2d:1d (2.7) BS02 SF4 ? GO:0003723 ... P80373 38238495
    814974 8g2d:1e (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 38238495
    814975 8g2d:1e (2.7) BS02 MG ? GO:0003723 ... Q5SHQ5 38238495
    814976 8g2d:1e (2.7) BS03 MG ? GO:0003723 ... Q5SHQ5 38238495
    814977 8g2d:1f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 38238495
    814978 8g2d:1g (2.7) BS01 rna ? GO:0000049 ... P17291 38238495
    814979 8g2d:1g (2.7) BS02 rna ? GO:0000049 ... P17291 38238495
    814980 8g2d:1h (2.7) BS01 rna ? GO:0003735 ... P0DOY9 38238495
    814981 8g2d:1i (2.7) BS01 rna ? GO:0003723 ... P80374 38238495
    814982 8g2d:1i (2.7) BS02 rna ? GO:0003723 ... P80374 38238495
    814983 8g2d:1j (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 38238495
    814984 8g2d:1k (2.7) BS01 rna ? GO:0003735 ... P80376 38238495
    814985 8g2d:1k (2.7) BS02 MG ? GO:0003735 ... P80376 38238495
    814986 8g2d:1l (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 38238495
    814987 8g2d:1l (2.7) BS02 rna ? GO:0000049 ... Q5SHN3 38238495
    814988 8g2d:1m (2.7) BS01 rna ? GO:0000049 ... P80377 38238495
    814989 8g2d:1m (2.7) BS02 rna ? GO:0000049 ... P80377 38238495
    814990 8g2d:1m (2.7) BS03 rna ? GO:0000049 ... P80377 38238495
    814991 8g2d:1m (2.7) BS04 MG ? GO:0000049 ... P80377 38238495
    814992 8g2d:1n (2.7) BS01 rna ? GO:0003735 ... P0DOY6 38238495
    814993 8g2d:1n (2.7) BS02 MG ? GO:0003735 ... P0DOY6 38238495
    814994 8g2d:1n (2.7) BS03 ZN ? GO:0003735 ... P0DOY6 38238495
    814995 8g2d:1o (2.7) BS01 rna ? GO:0003735 ... Q5SJ76 38238495
    814996 8g2d:1o (2.7) BS02 rna ? GO:0003735 ... Q5SJ76 38238495
    814997 8g2d:1p (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 38238495
    814998 8g2d:1q (2.7) BS01 rna ? GO:0003735 ... P0DOY7 38238495
    814999 8g2d:1r (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 38238495
    815000 8g2d:1s (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 38238495

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).