SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    814801 8gir:C (2.5) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    814802 8gir:C (2.5) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    814803 8gir:C (2.5) BS04 dna 2.7.7.86 N/A Q8C6L5 38740774
    814804 8gir:C (2.5) BS05 ATP 2.7.7.86 N/A Q8C6L5 38740774
    814805 8gir:C (2.5) BS06 ZN 2.7.7.86 N/A Q8C6L5 38740774
    814806 8gir:C (2.5) BS07 MN 2.7.7.86 N/A Q8C6L5 38740774
    814807 8gir:C (2.5) BS08 MN 2.7.7.86 N/A Q8C6L5 38740774
    814808 8gis:A (2.46) BS01 dna 2.7.7.86 N/A Q8C6L5 38740774
    814809 8gis:A (2.46) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    814810 8gis:A (2.46) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    814811 8gis:A (2.46) BS04 ATP 2.7.7.86 N/A Q8C6L5 38740774
    814812 8gis:A (2.46) BS05 ZN 2.7.7.86 N/A Q8C6L5 38740774
    814813 8gis:A (2.46) BS06 MN 2.7.7.86 N/A Q8C6L5 38740774
    814814 8gis:A (2.46) BS07 MN 2.7.7.86 N/A Q8C6L5 38740774
    814815 8gis:C (2.46) BS01 dna 2.7.7.86 N/A Q8C6L5 38740774
    814816 8gis:C (2.46) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    814817 8gis:C (2.46) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    814818 8gis:C (2.46) BS04 ATP 2.7.7.86 N/A Q8C6L5 38740774
    814819 8gis:C (2.46) BS05 ZN 2.7.7.86 N/A Q8C6L5 38740774
    814820 8gis:C (2.46) BS06 MN 2.7.7.86 N/A Q8C6L5 38740774
    814821 8gis:C (2.46) BS07 MN 2.7.7.86 N/A Q8C6L5 38740774
    814822 8git:A (2.72) BS01 dna 2.7.7.86 N/A Q8C6L5 38740774
    814823 8git:A (2.72) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    814824 8git:A (2.72) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    814825 8git:A (2.72) BS04 ATP 2.7.7.86 N/A Q8C6L5 38740774
    814826 8git:A (2.72) BS05 ZN 2.7.7.86 N/A Q8C6L5 38740774
    814827 8git:A (2.72) BS06 MN 2.7.7.86 N/A Q8C6L5 38740774
    814828 8git:A (2.72) BS07 MN 2.7.7.86 N/A Q8C6L5 38740774
    814829 8git:C (2.72) BS01 dna 2.7.7.86 N/A Q8C6L5 38740774
    814830 8git:C (2.72) BS02 dna 2.7.7.86 N/A Q8C6L5 38740774
    814831 8git:C (2.72) BS03 dna 2.7.7.86 N/A Q8C6L5 38740774
    814832 8git:C (2.72) BS04 dna 2.7.7.86 N/A Q8C6L5 38740774
    814833 8git:C (2.72) BS05 ATP 2.7.7.86 N/A Q8C6L5 38740774
    814834 8git:C (2.72) BS06 ZN 2.7.7.86 N/A Q8C6L5 38740774
    814835 8git:C (2.72) BS07 MN 2.7.7.86 N/A Q8C6L5 38740774
    814836 8git:C (2.72) BS08 MN 2.7.7.86 N/A Q8C6L5 38740774
    814837 8giw:A (3.15) BS01 FLC 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    814838 8giw:B (3.15) BS01 FLC 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    814839 8giw:C (3.15) BS01 FLC 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    814840 8giw:D (3.15) BS01 FLC 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    814841 8gix:E (3.9) BS01 TCE N/A GO:0000417 ... G0S723 38925115
    814842 8giy:B (3.7) BS01 AGS 2.7.7.7 GO:0003677 ... P06710 39333521
    814843 8giy:B (3.7) BS02 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814844 8giy:C (3.7) BS01 AGS 2.7.7.7 GO:0003677 ... P06710 39333521
    814845 8giy:C (3.7) BS02 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814846 8giy:D (3.7) BS01 AGS 2.7.7.7 GO:0003677 ... P06710 39333521
    814847 8giy:D (3.7) BS02 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814848 8giy:E (3.7) BS01 ZN 2.7.7.7 GO:0003677 ... P28631 39333521
    814849 8giz:B (2.7) BS01 AGS 2.7.7.7 GO:0003677 ... P06710 39333521
    814850 8giz:B (2.7) BS02 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814851 8giz:C (2.7) BS01 AGS 2.7.7.7 GO:0003677 ... P06710 39333521
    814852 8giz:C (2.7) BS02 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814853 8giz:D (2.7) BS01 AGS 2.7.7.7 GO:0003677 ... P06710 39333521
    814854 8giz:D (2.7) BS02 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814855 8giz:E (2.7) BS01 AGS 2.7.7.7 GO:0003677 ... P28631 39333521
    814856 8giz:E (2.7) BS02 ZN 2.7.7.7 GO:0003677 ... P28631 39333521
    814857 8gj0:A (2.9) BS01 dna 2.7.7.7 GO:0003677 ... P28630 39333521
    814858 8gj0:B (2.9) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814859 8gj0:B (2.9) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814860 8gj0:B (2.9) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814861 8gj0:B (2.9) BS04 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814862 8gj0:C (2.9) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814863 8gj0:C (2.9) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814864 8gj0:C (2.9) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814865 8gj0:C (2.9) BS04 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814866 8gj0:C (2.9) BS05 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814867 8gj0:D (2.9) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814868 8gj0:D (2.9) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814869 8gj0:D (2.9) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814870 8gj0:D (2.9) BS04 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814871 8gj0:D (2.9) BS05 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814872 8gj0:E (2.9) BS01 ZN 2.7.7.7 GO:0003677 ... P28631 39333521
    814873 8gj1:A (3.0) BS01 dna 2.7.7.7 GO:0003677 ... P28630 39333521
    814874 8gj1:B (3.0) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814875 8gj1:B (3.0) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814876 8gj1:B (3.0) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814877 8gj1:B (3.0) BS04 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814878 8gj1:B (3.0) BS05 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814879 8gj1:C (3.0) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814880 8gj1:C (3.0) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814881 8gj1:C (3.0) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814882 8gj1:C (3.0) BS04 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814883 8gj1:C (3.0) BS05 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814884 8gj1:D (3.0) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814885 8gj1:D (3.0) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814886 8gj1:D (3.0) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814887 8gj1:D (3.0) BS04 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814888 8gj1:D (3.0) BS05 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814889 8gj1:E (3.0) BS01 dna 2.7.7.7 GO:0003677 ... P28631 39333521
    814890 8gj1:E (3.0) BS02 ZN 2.7.7.7 GO:0003677 ... P28631 39333521
    814891 8gj2:A (2.6) BS01 dna 2.7.7.7 GO:0003677 ... P28630 39333521
    814892 8gj2:B (2.6) BS01 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814893 8gj2:B (2.6) BS02 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814894 8gj2:B (2.6) BS03 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814895 8gj2:B (2.6) BS04 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814896 8gj2:C (2.6) BS01 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814897 8gj2:C (2.6) BS02 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814898 8gj2:C (2.6) BS03 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814899 8gj2:D (2.6) BS01 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814900 8gj2:D (2.6) BS02 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814901 8gj2:D (2.6) BS03 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814902 8gj2:D (2.6) BS04 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814903 8gj2:E (2.6) BS01 ZN 2.7.7.7 GO:0003677 ... P28631 39333521
    814904 8gj3:A (2.8) BS01 dna 2.7.7.7 GO:0003677 ... P28630 39333521
    814905 8gj3:B (2.8) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814906 8gj3:B (2.8) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814907 8gj3:B (2.8) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814908 8gj3:B (2.8) BS04 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814909 8gj3:B (2.8) BS05 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814910 8gj3:C (2.8) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814911 8gj3:C (2.8) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814912 8gj3:C (2.8) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814913 8gj3:C (2.8) BS04 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814914 8gj3:C (2.8) BS05 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814915 8gj3:D (2.8) BS01 peptide 2.7.7.7 GO:0003677 ... P06710 39333521
    814916 8gj3:D (2.8) BS02 dna 2.7.7.7 GO:0003677 ... P06710 39333521
    814917 8gj3:D (2.8) BS03 ADP 2.7.7.7 GO:0003677 ... P06710 39333521
    814918 8gj3:D (2.8) BS04 ALF 2.7.7.7 GO:0003677 ... P06710 39333521
    814919 8gj3:D (2.8) BS05 ZN 2.7.7.7 GO:0003677 ... P06710 39333521
    814920 8gj3:E (2.8) BS01 dna 2.7.7.7 GO:0003677 ... P28631 39333521
    814921 8gj3:E (2.8) BS02 ZN 2.7.7.7 GO:0003677 ... P28631 39333521
    814922 8gj5:A (2.3) BS01 peptide ? GO:0003677 ... A0A229Y5V5 37998903
    814923 8gj5:B (2.3) BS01 peptide ? GO:0003677 ... A0A229Y5V5 37998903
    814924 8gj5:C (2.3) BS01 peptide ? GO:0003677 ... A0A229Y5V5 37998903
    814925 8gj6:A (2.77) BS01 ZSI N/A N/A O60341 N/A
    814926 8gj8:A (2.3) BS01 ADP N/A GO:0003677 ... N/A 37488098
    814927 8gja:A (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    814928 8gja:A (2.6) BS02 BEF N/A GO:0003677 ... N/A 37488098
    814929 8gja:B (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    814930 8gja:B (2.6) BS02 ADP N/A GO:0003677 ... N/A 37488098
    814931 8gja:B (2.6) BS03 BEF N/A GO:0003677 ... N/A 37488098
    814932 8gja:C (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    814933 8gja:C (2.6) BS02 BEF N/A GO:0003677 ... N/A 37488098
    814934 8gja:D (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    814935 8gja:D (2.6) BS02 ADP N/A GO:0003677 ... N/A 37488098
    814936 8gja:E (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    814937 8gja:E (2.6) BS02 BEF N/A GO:0003677 ... N/A 37488098
    814938 8gja:F (2.6) BS01 ADP N/A GO:0003677 ... N/A 37488098
    814939 8gja:F (2.6) BS02 ADP N/A GO:0003677 ... N/A 37488098
    814940 8gjb:A (1.75) BS01 NAD 1.1.1.103 N/A Q4CU39 N/A
    814941 8gjb:B (1.75) BS01 NAD 1.1.1.103 N/A Q4CU39 N/A
    814942 8gje:J (3.4) BS01 MAN N/A N/A N/A 37903160
    814943 8gje:K (3.4) BS01 MAN N/A N/A N/A 37903160
    814944 8gje:L (3.4) BS01 MAN N/A N/A N/A 37903160
    814945 8gjf:A (2.0) BS01 peptide ? GO:0003677 ... A0A229Y5V5 37998903
    814946 8gjf:B (2.0) BS01 peptide ? GO:0003677 ... A0A229Y5V5 37998903
    814947 8gjf:C (2.0) BS01 peptide ? GO:0003677 ... A0A229Y5V5 37998903
    814948 8gjg:A (1.95) BS01 peptide N/A N/A N/A 38109936
    814949 8gjh:A (3.6) BS01 UGA 1.1.1.305
    2.1.2.13
    GO:0003824 ... O52325 37410993
    814950 8gjh:B (3.6) BS01 UGA 1.1.1.305
    2.1.2.13
    GO:0003824 ... O52325 37410993
    814951 8gjh:C (3.6) BS01 UGA 1.1.1.305
    2.1.2.13
    GO:0003824 ... O52325 37410993
    814952 8gjh:D (3.6) BS01 UGA 1.1.1.305
    2.1.2.13
    GO:0003824 ... O52325 37410993
    814953 8gjh:E (3.6) BS01 UGA 1.1.1.305
    2.1.2.13
    GO:0003824 ... O52325 37410993
    814954 8gjh:F (3.6) BS01 UGA 1.1.1.305
    2.1.2.13
    GO:0003824 ... O52325 37410993
    814955 8gji:A (1.81) BS01 peptide N/A N/A N/A 38109936
    814956 8gjk:C (3.16) BS01 ZZ7 ? GO:0005886 ... A0A1C9A1J1 37289051
    814957 8gjl:C (3.44) BS01 CPF ? GO:0005886 ... A0A1C9A1J1 37289051
    814958 8gjs:A (1.75) BS01 peptide ? GO:0005634 ... Q7ZUW7 37439511
    814959 8gjt:A (3.5) BS01 ZNF ? GO:0019031 ... A0A0M3KKW9 37243271
    814960 8gju:A (2.79) BS01 GDP 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814961 8gju:A (2.79) BS02 MG 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814962 8gju:B (2.79) BS01 GDP 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814963 8gju:B (2.79) BS02 MG 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814964 8gju:D (2.79) BS01 GDP 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814965 8gju:D (2.79) BS02 MG 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814966 8gju:F (2.79) BS01 GDP 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814967 8gju:F (2.79) BS02 GDP 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814968 8gju:F (2.79) BS03 MG 3.6.-.- GO:0003924 ... Q8IVH4 37468522
    814969 8gju:H (2.79) BS01 COA 5.4.99.2 GO:0003824 ... P22033 37468522
    814970 8gju:J (2.79) BS01 COA 5.4.99.2 GO:0003824 ... P22033 37468522
    814971 8gju:K (2.79) BS01 COA 5.4.99.2 GO:0003824 ... P22033 37468522
    814972 8gju:L (2.79) BS01 COA 5.4.99.2 GO:0003824 ... P22033 37468522
    814973 8gjx:A (2.6) BS01 ZNT ? GO:0002218 ... Q86WV6 37379839
    814974 8gjx:B (2.6) BS01 ZNT ? GO:0002218 ... Q86WV6 37379839
    814975 8gjz:A (2.92) BS01 ZNT ? GO:0002218 ... A0A2B4SJD2 37379839
    814976 8gjz:B (2.92) BS01 ZNT ? GO:0002218 ... A0A2B4SJD2 37379839
    814977 8gk0:C (3.44) BS01 ERY ? GO:0005886 ... A0A1C9A1J1 37289051
    814978 8gk3:A (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    814979 8gk3:A (2.6) BS02 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814980 8gk3:A (2.6) BS03 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814981 8gk3:B (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    814982 8gk3:B (2.6) BS02 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814983 8gk3:B (2.6) BS03 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814984 8gk3:C (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    814985 8gk3:C (2.6) BS02 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814986 8gk3:C (2.6) BS03 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814987 8gk3:D (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    814988 8gk3:D (2.6) BS02 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814989 8gk3:D (2.6) BS03 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814990 8gk3:D (2.6) BS04 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814991 8gk3:E (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    814992 8gk3:E (2.6) BS02 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814993 8gk3:E (2.6) BS03 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814994 8gk3:E (2.6) BS04 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814995 8gk3:F (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    814996 8gk3:G (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    814997 8gk3:H (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    814998 8gk3:H (2.6) BS02 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    814999 8gk3:H (2.6) BS03 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    815000 8gk3:H (2.6) BS04 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).