SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    815001 8gk3:I (2.6) BS01 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    815002 8gk3:I (2.6) BS02 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    815003 8gk3:I (2.6) BS03 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    815004 8gk3:I (2.6) BS04 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    815005 8gk3:J (2.6) BS01 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    815006 8gk3:J (2.6) BS02 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    815007 8gk3:J (2.6) BS03 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    815008 8gk3:J (2.6) BS04 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    815009 8gk3:K (2.6) BS01 ZWY 1.14.14.1 GO:0002933 ... P24462 37392852
    815010 8gk3:K (2.6) BS02 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    815011 8gk3:L (2.6) BS01 HEM 1.14.14.1 GO:0002933 ... P24462 37392852
    815012 8gk4:C (3.12) BS01 CLM ? GO:0005886 ... A0A1C9A1J1 37289051
    815013 8gk5:A (2.3) BS01 Q6K N/A GO:0004672 ... P00533 N/A
    815014 8gk5:A (2.3) BS02 YW5 N/A GO:0004672 ... P00533 N/A
    815015 8gk5:B (2.3) BS01 Q6K N/A GO:0004672 ... P00533 N/A
    815016 8gk5:B (2.3) BS02 YW5 N/A GO:0004672 ... P00533 N/A
    815017 8gk5:C (2.3) BS01 Q6K N/A GO:0004672 ... P00533 N/A
    815018 8gk5:C (2.3) BS02 YW5 N/A GO:0004672 ... P00533 N/A
    815019 8gk5:D (2.3) BS01 Q6K N/A GO:0004672 ... P00533 N/A
    815020 8gk5:D (2.3) BS02 YW5 N/A GO:0004672 ... P00533 N/A
    815021 8gk7:A (3.32) BS01 ANP ? GO:0005524 ... A0A6F8TGG1 38649414
    815022 8gk7:A (3.32) BS02 ZQF ? GO:0005524 ... A0A6F8TGG1 38649414
    815023 8gk7:A (3.32) BS03 ANP ? GO:0005524 ... A0A6F8TGG1 38649414
    815024 8gk7:B (3.32) BS01 ANP ? GO:0005524 ... A0A6F8TGG1 38649414
    815025 8gk7:B (3.32) BS02 ZQF ? GO:0005524 ... A0A6F8TGG1 38649414
    815026 8gk7:B (3.32) BS03 ANP ? GO:0005524 ... A0A6F8TGG1 38649414
    815027 8gk8:A (2.68) BS01 COA 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815028 8gk8:A (2.68) BS02 BTI 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815029 8gk8:A (2.68) BS03 ACO 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815030 8gk8:A (2.68) BS04 MN 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815031 8gk8:B (2.68) BS01 MN 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815032 8gk8:B (2.68) BS02 BTI 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815033 8gk8:C (2.68) BS01 COA 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815034 8gk8:C (2.68) BS02 MN 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815035 8gk8:C (2.68) BS03 BTI 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815036 8gk8:C (2.68) BS04 ACO 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815037 8gk8:D (2.68) BS01 BTI 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815038 8gk8:D (2.68) BS02 MN 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    815039 8gkc:A (2.45) BS01 X5O 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    GO:0009058 ... P49327 37308485
    815040 8gkc:A (2.45) BS02 NDP 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    GO:0009058 ... P49327 37308485
    815041 8gkc:A (2.45) BS03 NDP 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    GO:0009058 ... P49327 37308485
    815042 8gkc:D (2.45) BS01 X5O 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    GO:0009058 ... P49327 37308485
    815043 8gkc:D (2.45) BS02 NDP 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    GO:0009058 ... P49327 37308485
    815044 8gkc:D (2.45) BS03 NDP 1.1.1.100
    1.3.1.39
    2.3.1.38
    2.3.1.39
    2.3.1.41
    2.3.1.85
    3.1.2.14
    4.2.1.59
    GO:0009058 ... P49327 37308485
    815045 8gkf:A (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815046 8gkf:B (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815047 8gkf:C (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815048 8gkf:D (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815049 8gkf:E (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815050 8gkf:F (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815051 8gkf:G (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815052 8gkf:H (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815053 8gkf:I (2.45) BS01 D16 2.7.8.7 GO:0000287 ... O33336 38489355
    815054 8gkh:P (2.7) BS01 dna ? GO:0008643 ... A0A0L0H5U9
    P0AEX9
    37380027
    815055 8gkh:P (2.7) BS02 dna ? GO:0008643 ... A0A0L0H5U9
    P0AEX9
    37380027
    815056 8gkh:P (2.7) BS03 rna ? GO:0008643 ... A0A0L0H5U9
    P0AEX9
    37380027
    815057 8gkh:P (2.7) BS04 MG ? GO:0008643 ... A0A0L0H5U9
    P0AEX9
    37380027
    815058 8gkh:P (2.7) BS05 MG ? GO:0008643 ... A0A0L0H5U9
    P0AEX9
    37380027
    815059 8gkh:P (2.7) BS06 ZN ? GO:0008643 ... A0A0L0H5U9
    P0AEX9
    37380027
    815060 8gkm:A (1.89) BS01 LEU ? N/A A0A561VI36 38030603
    815061 8gkm:B (1.89) BS01 LEU ? N/A A0A561VI36 38030603
    815062 8gkn:A (2.7) BS01 UDP ? GO:0000166 ... T1KUK4 N/A
    815063 8gkn:A (2.7) BS02 NAR ? GO:0000166 ... T1KUK4 N/A
    815064 8gkn:B (2.7) BS01 UDP ? GO:0000166 ... T1KUK4 N/A
    815065 8gkn:B (2.7) BS02 NAR ? GO:0000166 ... T1KUK4 N/A
    815066 8gkp:C (1.55) BS01 PMF 3.4.21.63 GO:0004252 ... P28296 37864071
    815067 8gkp:D (1.55) BS01 PMF 3.4.21.63 GO:0004252 ... P28296 37864071
    815068 8gkq:C (1.65) BS01 CA 3.4.21.63 GO:0004252 ... P28296 37864071
    815069 8gkr:A (2.784) BS01 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    815070 8gkr:A (2.784) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    815071 8gkr:A (2.784) BS03 B7P 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    815072 8gkr:A (2.784) BS04 CA 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    815073 8gkr:A (2.784) BS05 CA 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    815074 8gks:A (2.99) BS01 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815075 8gks:A (2.99) BS02 Y6U 2.1.2.1 GO:0002082 ... P34897 38324671
    815076 8gks:A (2.99) BS03 Y6U 2.1.2.1 GO:0002082 ... P34897 38324671
    815077 8gks:A (2.99) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815078 8gks:A (2.99) BS05 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815079 8gks:B (2.99) BS01 Y6U 2.1.2.1 GO:0002082 ... P34897 38324671
    815080 8gks:B (2.99) BS02 Y6U 2.1.2.1 GO:0002082 ... P34897 38324671
    815081 8gks:B (2.99) BS03 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815082 8gks:B (2.99) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815083 8gkt:A (2.64) BS01 PLG 2.1.2.1 GO:0002082 ... P34897 38324671
    815084 8gkt:A (2.64) BS02 Y7L 2.1.2.1 GO:0002082 ... P34897 38324671
    815085 8gkt:A (2.64) BS03 PLG 2.1.2.1 GO:0002082 ... P34897 38324671
    815086 8gkt:A (2.64) BS04 Y7L 2.1.2.1 GO:0002082 ... P34897 38324671
    815087 8gkt:B (2.64) BS01 PLG 2.1.2.1 GO:0002082 ... P34897 38324671
    815088 8gkt:B (2.64) BS02 Y7L 2.1.2.1 GO:0002082 ... P34897 38324671
    815089 8gkt:B (2.64) BS03 PLG 2.1.2.1 GO:0002082 ... P34897 38324671
    815090 8gkt:B (2.64) BS04 Y7L 2.1.2.1 GO:0002082 ... P34897 38324671
    815091 8gku:A (3.06) BS01 ZV1 2.1.2.1 GO:0002082 ... P34897 38324671
    815092 8gku:A (3.06) BS02 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815093 8gku:A (3.06) BS03 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815094 8gku:A (3.06) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815095 8gku:B (3.06) BS01 ZV1 2.1.2.1 GO:0002082 ... P34897 38324671
    815096 8gku:B (3.06) BS02 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815097 8gku:B (3.06) BS03 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815098 8gkw:A (2.38) BS01 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815099 8gkw:A (2.38) BS02 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815100 8gkw:A (2.38) BS03 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    815101 8gkw:A (2.38) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815102 8gkw:B (2.38) BS01 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815103 8gkw:B (2.38) BS02 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    815104 8gkw:B (2.38) BS03 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815105 8gkw:B (2.38) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815106 8gky:A (2.77) BS01 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    815107 8gky:A (2.77) BS02 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815108 8gky:A (2.77) BS03 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815109 8gky:A (2.77) BS04 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    815110 8gky:A (2.77) BS05 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815111 8gky:A (2.77) BS06 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815112 8gky:B (2.77) BS01 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    815113 8gky:B (2.77) BS02 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815114 8gky:B (2.77) BS03 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815115 8gky:B (2.77) BS04 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    815116 8gky:B (2.77) BS05 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815117 8gky:B (2.77) BS06 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815118 8gkz:A (2.75) BS01 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815119 8gkz:A (2.75) BS02 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815120 8gkz:A (2.75) BS03 Y72 2.1.2.1 GO:0002082 ... P34897 38324671
    815121 8gkz:A (2.75) BS04 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815122 8gkz:A (2.75) BS05 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815123 8gkz:B (2.75) BS01 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815124 8gkz:B (2.75) BS02 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815125 8gkz:B (2.75) BS03 Y72 2.1.2.1 GO:0002082 ... P34897 38324671
    815126 8gkz:B (2.75) BS04 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    815127 8gkz:B (2.75) BS05 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    815128 8gl6:A (3.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    815129 8gl6:F (3.2) BS01 LMN ? N/A A5FJM7 N/A
    815130 8gl7:A (2.4) BS01 peptide N/A N/A N/A N/A
    815131 8gl7:A (2.4) BS02 STR N/A N/A N/A N/A
    815132 8gl8:A (2.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    815133 8gl8:F (2.2) BS01 LMN ? N/A A5FJM7 N/A
    815134 8gl8:I (2.2) BS01 MAN ? N/A A1E5T9 N/A
    815135 8gl8:I (2.2) BS02 MAN ? N/A A1E5T9 N/A
    815136 8gl8:I (2.2) BS03 MAN ? N/A A1E5T9 N/A
    815137 8gl8:I (2.2) BS04 MAN ? N/A A1E5T9 N/A
    815138 8gl9:A (2.81) BS01 ZQW ? GO:0000122 ... P12004 37531956
    815139 8gl9:A (2.81) BS02 ZQW ? GO:0000122 ... P12004 37531956
    815140 8gl9:A (2.81) BS03 ZQW ? GO:0000122 ... P12004 37531956
    815141 8gl9:B (2.81) BS01 ZQW ? GO:0000122 ... P12004 37531956
    815142 8gl9:B (2.81) BS02 ZQW ? GO:0000122 ... P12004 37531956
    815143 8gl9:B (2.81) BS03 ZQW ? GO:0000122 ... P12004 37531956
    815144 8gla:A (3.77) BS01 ZQZ ? GO:0000122 ... P12004 37531956
    815145 8gla:A (3.77) BS02 ZQZ ? GO:0000122 ... P12004 37531956
    815146 8gla:A (3.77) BS03 ZQZ ? GO:0000122 ... P12004 37531956
    815147 8gla:B (3.77) BS01 ZQZ ? GO:0000122 ... P12004 37531956
    815148 8gla:B (3.77) BS02 ZQZ ? GO:0000122 ... P12004 37531956
    815149 8gla:B (3.77) BS03 ZQZ ? GO:0000122 ... P12004 37531956
    815150 8glb:A (2.1) BS01 PYR 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    815151 8glb:B (2.1) BS01 PYR 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    815152 8glb:C (2.1) BS01 PYR 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    815153 8glb:D (2.1) BS01 PYR 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    815154 8gle:A (1.85) BS01 SGF ? N/A P29016 37725977
    815155 8gle:A (1.85) BS02 CUY ? N/A P29016 37725977
    815156 8glf:A (2.0) BS01 3LY ? N/A P29016 37725977
    815157 8glg:A (1.6) BS01 L9Q ? N/A P29016 37725977
    815158 8glg:A (1.6) BS02 CUY ? N/A P29016 37725977
    815159 8glh:A (1.83) BS01 3IV ? N/A P29016 37725977
    815160 8glh:A (1.83) BS02 3IY ? N/A P29016 37725977
    815161 8gli:A (2.1) BS01 ZR2 ? N/A P29016 37725977
    815162 8glj:A (3.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    815163 8glj:F (3.2) BS01 LMN ? N/A A5FJM7 N/A
    815164 8glk:A (2.8) BS01 LMN ? N/A A0A1M5G5I4 N/A
    815165 8glk:F (2.8) BS01 LMN ? N/A A5FJM7 N/A
    815166 8glm:A (2.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    815167 8glm:F (2.2) BS01 LMN ? N/A A5FJM7 N/A
    815168 8gln:A (2.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    815169 8gln:F (2.2) BS01 LMN ? N/A A5FJM7 N/A
    815170 8glo:A (1.937) BS01 HEB ? GO:0046872 ... A0A369Z2V2 38814789
    815171 8glp:LA (1.67) BS01 rna N/A N/A N/A 37020024
    815172 8glp:LA (1.67) BS02 rna N/A N/A N/A 37020024
    815173 8glp:LB (1.67) BS01 rna ? GO:0002181 ... P39023 37020024
    815174 8glp:LC (1.67) BS01 rna ? GO:0002181 ... P36578 37020024
    815175 8glp:LC (1.67) BS02 rna ? GO:0002181 ... P36578 37020024
    815176 8glp:LC (1.67) BS03 MG ? GO:0002181 ... P36578 37020024
    815177 8glp:LD (1.67) BS01 rna ? GO:0000027 ... P46777 37020024
    815178 8glp:LD (1.67) BS02 rna ? GO:0000027 ... P46777 37020024
    815179 8glp:LD (1.67) BS03 MG ? GO:0000027 ... P46777 37020024
    815180 8glp:LD (1.67) BS04 MG ? GO:0000027 ... P46777 37020024
    815181 8glp:LE (1.67) BS01 rna ? GO:0002181 ... Q02878 37020024
    815182 8glp:LF (1.67) BS01 rna ? GO:0000463 ... P18124 37020024
    815183 8glp:LF (1.67) BS02 rna ? GO:0000463 ... P18124 37020024
    815184 8glp:LG (1.67) BS01 rna ? GO:0000470 ... P62424 37020024
    815185 8glp:LG (1.67) BS02 rna ? GO:0000470 ... P62424 37020024
    815186 8glp:LH (1.67) BS01 rna ? GO:0002181 ... P32969 37020024
    815187 8glp:LH (1.67) BS02 MG ? GO:0002181 ... P32969 37020024
    815188 8glp:LI (1.67) BS01 rna ? GO:0000122 ... P27635 37020024
    815189 8glp:LI (1.67) BS02 rna ? GO:0000122 ... P27635 37020024
    815190 8glp:LJ (1.67) BS01 rna ? GO:0000027 ... P62913 37020024
    815191 8glp:LJ (1.67) BS02 rna ? GO:0000027 ... P62913 37020024
    815192 8glp:LJ (1.67) BS03 rna ? GO:0000027 ... P62913 37020024
    815193 8glp:LL (1.67) BS01 rna ? GO:0001824 ... P26373 37020024
    815194 8glp:LL (1.67) BS02 rna ? GO:0001824 ... P26373 37020024
    815195 8glp:LL (1.67) BS03 MG ? GO:0001824 ... P26373 37020024
    815196 8glp:LL (1.67) BS04 MG ? GO:0001824 ... P26373 37020024
    815197 8glp:LM (1.67) BS01 rna ? GO:0002181 ... P50914 37020024
    815198 8glp:LN (1.67) BS01 rna ? GO:0002181 ... P61313 37020024
    815199 8glp:LN (1.67) BS02 rna ? GO:0002181 ... P61313 37020024
    815200 8glp:LO (1.67) BS01 rna ? GO:0002181 ... P40429 37020024

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).