SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    81401 2ein:A (2.7) BS02 MG 7.1.1.9 GO:0004129 ... P00396 17470809
    81402 2ein:A (2.7) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 17470809
    81403 2ein:A (2.7) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 17470809
    81404 2ein:B (2.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 17470809
    81405 2ein:B (2.7) BS02 ZN 7.1.1.9 GO:0004129 ... P68530 17470809
    81406 2ein:B (2.7) BS03 CUA 7.1.1.9 GO:0004129 ... P68530 17470809
    81407 2ein:C (2.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 17470809
    81408 2ein:C (2.7) BS02 ZN 7.1.1.9 GO:0004129 ... P00415 17470809
    81409 2ein:F (2.7) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 17470809
    81410 2ein:F (2.7) BS02 ZN 1.9.3.1 GO:0005740 ... P00428 17470809
    81411 2ein:G (2.7) BS01 DMU 1.9.3.1 GO:0005743 ... P07471 17470809
    81412 2ein:L (2.7) BS01 ZN 1.9.3.1 GO:0006123 ... P00430 17470809
    81413 2ein:M (2.7) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 17470809
    81414 2ein:N (2.7) BS01 CU 7.1.1.9 GO:0004129 ... P00396 17470809
    81415 2ein:N (2.7) BS02 MG 7.1.1.9 GO:0004129 ... P00396 17470809
    81416 2ein:N (2.7) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 17470809
    81417 2ein:N (2.7) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 17470809
    81418 2ein:O (2.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 17470809
    81419 2ein:O (2.7) BS02 ZN 7.1.1.9 GO:0004129 ... P68530 17470809
    81420 2ein:O (2.7) BS03 CUA 7.1.1.9 GO:0004129 ... P68530 17470809
    81421 2ein:P (2.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 17470809
    81422 2ein:P (2.7) BS02 ZN 7.1.1.9 GO:0004129 ... P00415 17470809
    81423 2ein:Q (2.7) BS01 DMU 1.9.3.1 GO:0006123 ... P00423 17470809
    81424 2ein:S (2.7) BS01 ZN 1.9.3.1 GO:0005740 ... P00428 17470809
    81425 2ein:S (2.7) BS02 ZN 1.9.3.1 GO:0005740 ... P00428 17470809
    81426 2ein:T (2.7) BS01 DMU 1.9.3.1 GO:0005743 ... P07471 17470809
    81427 2ein:Z (2.7) BS01 DMU 1.9.3.1 GO:0006123 ... P10175 17470809
    81428 2eiq:A (1.9) BS01 CU ? GO:0005515 ... P0AA25 17727880
    81429 2eiq:B (1.9) BS01 CU ? GO:0005515 ... P0AA25 17727880
    81430 2eir:A (2.5) BS01 CU ? GO:0005515 ... P0AA25 17727880
    81431 2eir:B (2.5) BS01 CU ? GO:0005515 ... P0AA25 17727880
    81432 2eir:C (2.5) BS01 CU ? GO:0005515 ... P0AA25 17727880
    81433 2eir:D (2.5) BS01 CU ? GO:0005515 ... P0AA25 17727880
    81434 2eis:A (2.1) BS01 COA ? GO:0005737 ... Q53VX2 N/A
    81435 2eis:B (2.1) BS01 COA ? GO:0005737 ... Q53VX2 N/A
    81436 2eit:A (1.65) BS01 ALA 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81437 2eit:A (1.65) BS02 NAD 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81438 2eit:B (1.65) BS01 ALA 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81439 2eit:B (1.65) BS02 NAD 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81440 2eiw:A (1.9) BS01 PRO 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81441 2eiw:B (1.9) BS01 PRO 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81442 2eix:A (1.56) BS01 FAD 1.6.2.2 GO:0006221 ... Q1HA49 17401193
    81443 2eix:A (1.56) BS02 FAD 1.6.2.2 GO:0006221 ... Q1HA49 17401193
    81444 2eix:B (1.56) BS01 FAD 1.6.2.2 GO:0006221 ... Q1HA49 17401193
    81445 2eix:B (1.56) BS02 FAD 1.6.2.2 GO:0006221 ... Q1HA49 17401193
    81446 2eiy:A (1.35) BS01 PLP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81447 2eiy:A (1.35) BS02 4MV 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81448 2eiy:B (1.35) BS01 PLP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81449 2eiy:B (1.35) BS02 4MV 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81450 2eiy:C (1.35) BS01 PLP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81451 2eiy:C (1.35) BS02 4MV 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81452 2ej0:A (1.6) BS01 PMP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81453 2ej0:B (1.6) BS01 PMP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81454 2ej0:C (1.6) BS01 PMP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81455 2ej0:D (1.6) BS01 PMP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81456 2ej0:E (1.6) BS01 PMP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81457 2ej0:F (1.6) BS01 PMP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81458 2ej1:A (1.8) BS01 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81459 2ej1:A (1.8) BS02 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81460 2ej1:A (1.8) BS03 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81461 2ej1:A (1.8) BS04 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81462 2ej1:A (1.8) BS05 ZN 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81463 2ej1:A (1.8) BS06 CA 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81464 2ej2:A (2.0) BS01 PPE 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81465 2ej2:B (2.0) BS01 PPE 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81466 2ej2:C (2.0) BS01 PPE 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81467 2ej2:D (2.0) BS01 PPE 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81468 2ej2:E (2.0) BS01 PPE 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81469 2ej2:F (2.0) BS01 PPE 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81470 2ej3:A (2.2) BS01 PLP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81471 2ej3:A (2.2) BS02 GBN 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81472 2ej3:B (2.2) BS01 PLP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81473 2ej3:B (2.2) BS02 GBN 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81474 2ej3:C (2.2) BS01 PLP 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81475 2ej3:C (2.2) BS02 GBN 2.6.1.42 GO:0003824 ... Q5SM19 N/A
    81476 2ej4:A (-1.00) BS01 ZN ? GO:0000977 ... O60481 N/A
    81477 2ej4:A (-1.00) BS02 ZN ? GO:0000977 ... O60481 N/A
    81478 2ej6:A (2.06) BS01 DPR 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81479 2ej6:B (2.06) BS01 DPR 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81480 2ej9:A (2.0) BS01 BTN 6.3.4.15 GO:0004077 ... Q59014 N/A
    81481 2ejc:A (2.4) BS01 ZN 6.3.2.1 GO:0003824 ... Q9X0G6 N/A
    81482 2ejc:A (2.4) BS02 ZN 6.3.2.1 GO:0003824 ... Q9X0G6 N/A
    81483 2ejc:A (2.4) BS03 ZN 6.3.2.1 GO:0003824 ... Q9X0G6 N/A
    81484 2ejc:A (2.4) BS04 ZN 6.3.2.1 GO:0003824 ... Q9X0G6 N/A
    81485 2ejc:A (2.4) BS05 ZN 6.3.2.1 GO:0003824 ... Q9X0G6 N/A
    81486 2ejc:A (2.4) BS06 ZN 6.3.2.1 GO:0003824 ... Q9X0G6 N/A
    81487 2ejd:A (1.85) BS01 ALA 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81488 2ejd:B (1.85) BS01 ALA 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81489 2ejf:A (2.0) BS01 BTN ? GO:0004077 ... O57883 18372281
    81490 2ejf:A (2.0) BS02 ADN ? GO:0004077 ... O57883 18372281
    81491 2ejf:B (2.0) BS01 BTN ? GO:0004077 ... O57883 18372281
    81492 2ejf:B (2.0) BS02 ADN ? GO:0004077 ... O57883 18372281
    81493 2ejf:C (2.0) BS01 BTN ? N/A O59021 18372281
    81494 2ejg:A (2.71) BS01 BTN ? GO:0004077 ... O57883 18372281
    81495 2ejg:A (2.71) BS02 ADN ? GO:0004077 ... O57883 18372281
    81496 2ejg:B (2.71) BS01 BTN ? GO:0004077 ... O57883 18372281
    81497 2ejg:B (2.71) BS02 ADN ? GO:0004077 ... O57883 18372281
    81498 2ejj:A (2.1) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81499 2ejk:A (2.4) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81500 2ejl:A (1.5) BS01 SER 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81501 2ejl:B (1.5) BS01 SER 1.2.1.88 GO:0003842 ... Q5SI02 N/A
    81502 2ejn:A (1.64) BS01 CA ? GO:0005496 ... P30438
    P30440
    17543334
    81503 2ejn:A (1.64) BS02 CA ? GO:0005496 ... P30438
    P30440
    17543334
    81504 2ejn:B (1.64) BS01 CA ? GO:0005496 ... P30438
    P30440
    17543334
    81505 2ejn:B (1.64) BS02 CA ? GO:0005496 ... P30438
    P30440
    17543334
    81506 2ejq:B (2.08) BS01 MG ? N/A Q5SLR6 N/A
    81507 2ejr:A (2.7) BS01 F2N 1.14.99.66 GO:0005634 ... O60341 18039463
    81508 2ejt:A (2.2) BS01 SAM 2.1.1.216 GO:0002940 ... O59493 18789948
    81509 2eju:A (1.95) BS01 SAH 2.1.1.216 GO:0002940 ... O59493 18789948
    81510 2ejv:A (2.55) BS01 ZN 1.1.1.103 GO:0005737 ... Q5SKS4 N/A
    81511 2ejv:A (2.55) BS02 ZN 1.1.1.103 GO:0005737 ... Q5SKS4 N/A
    81512 2ejv:A (2.55) BS03 NAD 1.1.1.103 GO:0005737 ... Q5SKS4 N/A
    81513 2ejv:B (2.55) BS01 ZN 1.1.1.103 GO:0005737 ... Q5SKS4 N/A
    81514 2ejv:B (2.55) BS02 ZN 1.1.1.103 GO:0005737 ... Q5SKS4 N/A
    81515 2ejv:B (2.55) BS03 NAD 1.1.1.103 GO:0005737 ... Q5SKS4 N/A
    81516 2ejw:A (1.7) BS01 MG 1.1.1.3 GO:0004412 ... Q5SL04 N/A
    81517 2ejw:B (1.7) BS01 MG 1.1.1.3 GO:0004412 ... Q5SL04 N/A
    81518 2ejw:E (1.7) BS01 MG 1.1.1.3 GO:0004412 ... Q5SL04 N/A
    81519 2ejw:F (1.7) BS01 MG 1.1.1.3 GO:0004412 ... Q5SL04 N/A
    81520 2ejy:A (-1.00) BS01 peptide ? N/A Q00013 17572384
    81521 2ejz:A (1.85) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81522 2ejz:B (1.85) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81523 2ek2:A (2.2) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81524 2ek3:A (2.8) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81525 2ek4:A (2.2) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81526 2ek7:A (2.0) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81527 2ek8:A (1.8) BS01 ZN ? GO:0006508 ... A2V759 N/A
    81528 2ek8:A (1.8) BS02 ZN ? GO:0006508 ... A2V759 N/A
    81529 2ek8:A (1.8) BS03 ZN ? GO:0006508 ... A2V759 N/A
    81530 2ek8:A (1.8) BS04 ZN ? GO:0006508 ... A2V759 N/A
    81531 2ek9:A (1.97) BS01 ZN ? GO:0006508 ... A2V759 N/A
    81532 2ek9:A (1.97) BS02 ZN ? GO:0006508 ... A2V759 N/A
    81533 2ek9:A (1.97) BS03 ZN ? GO:0006508 ... A2V759 N/A
    81534 2ek9:A (1.97) BS04 ZN ? GO:0006508 ... A2V759 N/A
    81535 2ek9:A (1.97) BS05 BES ? GO:0006508 ... A2V759 N/A
    81536 2eka:A (2.3) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81537 2ekg:A (1.9) BS01 FAD 1.5.5.2 GO:0004657 ... Q72IB8 18426222
    81538 2ekg:B (1.9) BS01 FAD 1.5.5.2 GO:0004657 ... Q72IB8 18426222
    81539 2ekl:A (1.77) BS01 NAD 1.1.1.95 GO:0004617 ... Q972A9 N/A
    81540 2ekp:A (1.15) BS01 NAD 1.1.1.125 GO:0003824 ... Q53W82 24699644
    81541 2ekt:A (1.1) BS01 6HE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 17636874
    81542 2eku:A (1.4) BS01 7HE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 17636874
    81543 2el0:A (2.4) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81544 2el1:A (2.2) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81545 2el2:A (2.3) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81546 2el3:A (2.4) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81547 2el4:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81548 2el5:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81549 2el6:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81550 2el9:A (2.7) BS01 HSS 6.1.1.21 GO:0004821 ... P60906 N/A
    81551 2el9:B (2.7) BS01 HSS 6.1.1.21 GO:0004821 ... P60906 N/A
    81552 2el9:C (2.7) BS01 HSS 6.1.1.21 GO:0004821 ... P60906 N/A
    81553 2el9:D (2.7) BS01 HSS 6.1.1.21 GO:0004821 ... P60906 N/A
    81554 2eld:A (2.3) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81555 2ele:A (2.4) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81556 2eli:A (-1.00) BS01 ZN 2.7.11.13 N/A P17252 N/A
    81557 2eli:A (-1.00) BS02 ZN 2.7.11.13 N/A P17252 N/A
    81558 2elm:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81559 2eln:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81560 2elo:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81561 2elp:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81562 2elq:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81563 2elr:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81564 2els:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81565 2elt:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81566 2elu:A (-1.00) BS01 ZN ? GO:0003677 ... Q9P243 N/A
    81567 2elv:A (-1.00) BS01 ZN ? N/A Q9P243 N/A
    81568 2elw:A (-1.00) BS01 ZN ? GO:0003677 ... Q7TS63 N/A
    81569 2elx:A (-1.00) BS01 ZN ? N/A Q7TS63 N/A
    81570 2ely:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81571 2elz:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81572 2em0:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81573 2em1:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81574 2em2:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81575 2em3:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81576 2em4:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81577 2em5:A (-1.00) BS01 ZN ? N/A Q9Y2L8 N/A
    81578 2em6:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81579 2em7:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81580 2em8:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81581 2em9:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81582 2ema:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81583 2emb:A (-1.00) BS01 ZN ? N/A Q8WTR7 N/A
    81584 2emc:A (-1.00) BS01 ZN ? N/A Q8WTR7 N/A
    81585 2eme:A (-1.00) BS01 ZN ? N/A Q8WTR7 N/A
    81586 2emf:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81587 2emg:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81588 2emh:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81589 2emi:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81590 2emj:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81591 2emk:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81592 2eml:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81593 2emm:A (-1.00) BS01 ZN ? N/A Q9Y2L8 N/A
    81594 2emp:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81595 2emr:A (2.4) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81596 2ems:A (2.9) BS01 peptide ? GO:0003779 ... P26043 18614175
    81597 2emt:A (2.8) BS01 peptide ? GO:0003779 ... P26043 18076570
    81598 2emt:A (2.8) BS02 peptide ? GO:0003779 ... P26043 18076570
    81599 2emt:B (2.8) BS01 peptide ? GO:0003779 ... P26043 18076570
    81600 2emu:A (2.2) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).