SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    816401 8gn1:d (2.1) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816402 8gn1:d (2.1) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816403 8gn1:d (2.1) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816404 8gn1:d (2.1) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816405 8gn1:e (2.1) BS01 HEM ? GO:0005506 ... P12238 37209822
    816406 8gn1:f (2.1) BS01 HEM ? GO:0005506 ... P12239 37209822
    816407 8gn1:h (2.1) BS01 CLA ? GO:0009523 ... P19052 37209822
    816408 8gn1:h (2.1) BS02 CLA ? GO:0009523 ... P19052 37209822
    816409 8gn1:h (2.1) BS03 CLA ? GO:0009523 ... P19052 37209822
    816410 8gn1:h (2.1) BS04 CLA ? GO:0009523 ... P19052 37209822
    816411 8gn1:h (2.1) BS05 RRX ? GO:0009523 ... P19052 37209822
    816412 8gn1:i (2.1) BS01 CLA ? GO:0005737 ... P12240 37209822
    816413 8gn1:j (2.1) BS01 MG ? GO:0009523 ... Q7DGD4 37209822
    816414 8gn1:k (2.1) BS01 peptide ? GO:0005737 ... P19054 37209822
    816415 8gn1:k (2.1) BS02 CLA ? GO:0005737 ... P19054 37209822
    816416 8gn1:k (2.1) BS03 CLA ? GO:0005737 ... P19054 37209822
    816417 8gn1:o (2.1) BS01 CA ? GO:0009523 ... D0VWR2 37209822
    816418 8gn1:v (2.1) BS01 HEC ? GO:0005506 ... P0A387 37209822
    816419 8gn1:x (2.1) BS01 CLA ? GO:0009523 ... D0VWR4 37209822
    816420 8gn1:z (2.1) BS01 peptide ? GO:0009523 ... D0VWR5 37209822
    816421 8gn2:A (1.95) BS01 OEX 1.10.3.9 GO:0005506 ... P51765 37209822
    816422 8gn2:A (1.95) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 37209822
    816423 8gn2:A (1.95) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816424 8gn2:A (1.95) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816425 8gn2:A (1.95) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816426 8gn2:A (1.95) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    816427 8gn2:A (1.95) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816428 8gn2:A (1.95) BS08 K3C 1.10.3.9 GO:0005506 ... P51765 37209822
    816429 8gn2:A (1.95) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    816430 8gn2:A (1.95) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816431 8gn2:A (1.95) BS11 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    816432 8gn2:B (1.95) BS01 CLA ? GO:0009521 ... D0VWR1 37209822
    816433 8gn2:B (1.95) BS02 CLA ? GO:0009521 ... D0VWR1 37209822
    816434 8gn2:B (1.95) BS03 CLA ? GO:0009521 ... D0VWR1 37209822
    816435 8gn2:B (1.95) BS04 CLA ? GO:0009521 ... D0VWR1 37209822
    816436 8gn2:B (1.95) BS05 CLA ? GO:0009521 ... D0VWR1 37209822
    816437 8gn2:B (1.95) BS06 CLA ? GO:0009521 ... D0VWR1 37209822
    816438 8gn2:B (1.95) BS07 CLA ? GO:0009521 ... D0VWR1 37209822
    816439 8gn2:B (1.95) BS08 CLA ? GO:0009521 ... D0VWR1 37209822
    816440 8gn2:B (1.95) BS09 CLA ? GO:0009521 ... D0VWR1 37209822
    816441 8gn2:B (1.95) BS10 CLA ? GO:0009521 ... D0VWR1 37209822
    816442 8gn2:B (1.95) BS11 CLA ? GO:0009521 ... D0VWR1 37209822
    816443 8gn2:B (1.95) BS12 CLA ? GO:0009521 ... D0VWR1 37209822
    816444 8gn2:B (1.95) BS13 CLA ? GO:0009521 ... D0VWR1 37209822
    816445 8gn2:B (1.95) BS14 CLA ? GO:0009521 ... D0VWR1 37209822
    816446 8gn2:B (1.95) BS15 CLA ? GO:0009521 ... D0VWR1 37209822
    816447 8gn2:B (1.95) BS16 CLA ? GO:0009521 ... D0VWR1 37209822
    816448 8gn2:C (1.95) BS01 OEX ? GO:0005737 ... D0VWR7 37209822
    816449 8gn2:C (1.95) BS02 CLA ? GO:0005737 ... D0VWR7 37209822
    816450 8gn2:C (1.95) BS03 CLA ? GO:0005737 ... D0VWR7 37209822
    816451 8gn2:C (1.95) BS04 CLA ? GO:0005737 ... D0VWR7 37209822
    816452 8gn2:C (1.95) BS05 CLA ? GO:0005737 ... D0VWR7 37209822
    816453 8gn2:C (1.95) BS06 CLA ? GO:0005737 ... D0VWR7 37209822
    816454 8gn2:C (1.95) BS07 CLA ? GO:0005737 ... D0VWR7 37209822
    816455 8gn2:C (1.95) BS08 CLA ? GO:0005737 ... D0VWR7 37209822
    816456 8gn2:C (1.95) BS09 CLA ? GO:0005737 ... D0VWR7 37209822
    816457 8gn2:C (1.95) BS10 CLA ? GO:0005737 ... D0VWR7 37209822
    816458 8gn2:C (1.95) BS11 CLA ? GO:0005737 ... D0VWR7 37209822
    816459 8gn2:C (1.95) BS12 CLA ? GO:0005737 ... D0VWR7 37209822
    816460 8gn2:C (1.95) BS13 CLA ? GO:0005737 ... D0VWR7 37209822
    816461 8gn2:C (1.95) BS14 CLA ? GO:0005737 ... D0VWR7 37209822
    816462 8gn2:D (1.95) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816463 8gn2:D (1.95) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816464 8gn2:D (1.95) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816465 8gn2:D (1.95) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816466 8gn2:D (1.95) BS05 BCT 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816467 8gn2:D (1.95) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816468 8gn2:D (1.95) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816469 8gn2:D (1.95) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816470 8gn2:D (1.95) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816471 8gn2:E (1.95) BS01 HEM ? GO:0005506 ... P12238 37209822
    816472 8gn2:F (1.95) BS01 HEM ? GO:0005506 ... P12239 37209822
    816473 8gn2:H (1.95) BS01 CLA ? GO:0009523 ... P19052 37209822
    816474 8gn2:H (1.95) BS02 CLA ? GO:0009523 ... P19052 37209822
    816475 8gn2:H (1.95) BS03 CLA ? GO:0009523 ... P19052 37209822
    816476 8gn2:H (1.95) BS04 RRX ? GO:0009523 ... P19052 37209822
    816477 8gn2:I (1.95) BS01 CLA ? GO:0005737 ... P12240 37209822
    816478 8gn2:J (1.95) BS01 MG ? GO:0009523 ... Q7DGD4 37209822
    816479 8gn2:K (1.95) BS01 peptide ? GO:0005737 ... P19054 37209822
    816480 8gn2:K (1.95) BS02 CLA ? GO:0005737 ... P19054 37209822
    816481 8gn2:K (1.95) BS03 CLA ? GO:0005737 ... P19054 37209822
    816482 8gn2:O (1.95) BS01 CA ? GO:0009523 ... D0VWR2 37209822
    816483 8gn2:V (1.95) BS01 HEC ? GO:0005506 ... P0A387 37209822
    816484 8gn2:Z (1.95) BS01 peptide ? GO:0009523 ... D0VWR5 37209822
    816485 8gn2:a (1.95) BS01 OEX 1.10.3.9 GO:0005506 ... P51765 37209822
    816486 8gn2:a (1.95) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 37209822
    816487 8gn2:a (1.95) BS03 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    816488 8gn2:a (1.95) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816489 8gn2:a (1.95) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816490 8gn2:a (1.95) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816491 8gn2:a (1.95) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    816492 8gn2:a (1.95) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816493 8gn2:a (1.95) BS09 K3C 1.10.3.9 GO:0005506 ... P51765 37209822
    816494 8gn2:a (1.95) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    816495 8gn2:a (1.95) BS11 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    816496 8gn2:b (1.95) BS01 CLA ? GO:0009521 ... D0VWR1 37209822
    816497 8gn2:b (1.95) BS02 CLA ? GO:0009521 ... D0VWR1 37209822
    816498 8gn2:b (1.95) BS03 CLA ? GO:0009521 ... D0VWR1 37209822
    816499 8gn2:b (1.95) BS04 CLA ? GO:0009521 ... D0VWR1 37209822
    816500 8gn2:b (1.95) BS05 CLA ? GO:0009521 ... D0VWR1 37209822
    816501 8gn2:b (1.95) BS06 CLA ? GO:0009521 ... D0VWR1 37209822
    816502 8gn2:b (1.95) BS07 CLA ? GO:0009521 ... D0VWR1 37209822
    816503 8gn2:b (1.95) BS08 CLA ? GO:0009521 ... D0VWR1 37209822
    816504 8gn2:b (1.95) BS09 CLA ? GO:0009521 ... D0VWR1 37209822
    816505 8gn2:b (1.95) BS10 CLA ? GO:0009521 ... D0VWR1 37209822
    816506 8gn2:b (1.95) BS11 CLA ? GO:0009521 ... D0VWR1 37209822
    816507 8gn2:b (1.95) BS12 CLA ? GO:0009521 ... D0VWR1 37209822
    816508 8gn2:b (1.95) BS13 CLA ? GO:0009521 ... D0VWR1 37209822
    816509 8gn2:b (1.95) BS14 CLA ? GO:0009521 ... D0VWR1 37209822
    816510 8gn2:b (1.95) BS15 CLA ? GO:0009521 ... D0VWR1 37209822
    816511 8gn2:b (1.95) BS16 CLA ? GO:0009521 ... D0VWR1 37209822
    816512 8gn2:c (1.95) BS01 OEX ? GO:0005737 ... D0VWR7 37209822
    816513 8gn2:c (1.95) BS02 CA ? GO:0005737 ... D0VWR7 37209822
    816514 8gn2:c (1.95) BS03 CLA ? GO:0005737 ... D0VWR7 37209822
    816515 8gn2:c (1.95) BS04 CLA ? GO:0005737 ... D0VWR7 37209822
    816516 8gn2:c (1.95) BS05 CLA ? GO:0005737 ... D0VWR7 37209822
    816517 8gn2:c (1.95) BS06 CLA ? GO:0005737 ... D0VWR7 37209822
    816518 8gn2:c (1.95) BS07 CLA ? GO:0005737 ... D0VWR7 37209822
    816519 8gn2:c (1.95) BS08 CLA ? GO:0005737 ... D0VWR7 37209822
    816520 8gn2:c (1.95) BS09 CLA ? GO:0005737 ... D0VWR7 37209822
    816521 8gn2:c (1.95) BS10 CLA ? GO:0005737 ... D0VWR7 37209822
    816522 8gn2:c (1.95) BS11 CLA ? GO:0005737 ... D0VWR7 37209822
    816523 8gn2:c (1.95) BS12 CLA ? GO:0005737 ... D0VWR7 37209822
    816524 8gn2:c (1.95) BS13 CLA ? GO:0005737 ... D0VWR7 37209822
    816525 8gn2:c (1.95) BS14 CLA ? GO:0005737 ... D0VWR7 37209822
    816526 8gn2:c (1.95) BS15 CLA ? GO:0005737 ... D0VWR7 37209822
    816527 8gn2:d (1.95) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816528 8gn2:d (1.95) BS02 BCT 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816529 8gn2:d (1.95) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816530 8gn2:d (1.95) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816531 8gn2:d (1.95) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816532 8gn2:d (1.95) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816533 8gn2:d (1.95) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816534 8gn2:d (1.95) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816535 8gn2:d (1.95) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    816536 8gn2:e (1.95) BS01 HEM ? GO:0005506 ... P12238 37209822
    816537 8gn2:f (1.95) BS01 HEM ? GO:0005506 ... P12239 37209822
    816538 8gn2:h (1.95) BS01 CLA ? GO:0009523 ... P19052 37209822
    816539 8gn2:h (1.95) BS02 CLA ? GO:0009523 ... P19052 37209822
    816540 8gn2:h (1.95) BS03 CLA ? GO:0009523 ... P19052 37209822
    816541 8gn2:h (1.95) BS04 RRX ? GO:0009523 ... P19052 37209822
    816542 8gn2:i (1.95) BS01 CLA ? GO:0005737 ... P12240 37209822
    816543 8gn2:j (1.95) BS01 MG ? GO:0009523 ... Q7DGD4 37209822
    816544 8gn2:k (1.95) BS01 peptide ? GO:0005737 ... P19054 37209822
    816545 8gn2:k (1.95) BS02 CLA ? GO:0005737 ... P19054 37209822
    816546 8gn2:k (1.95) BS03 CLA ? GO:0005737 ... P19054 37209822
    816547 8gn2:o (1.95) BS01 CA ? GO:0009523 ... D0VWR2 37209822
    816548 8gn2:v (1.95) BS01 HEC ? GO:0005506 ... P0A387 37209822
    816549 8gn2:x (1.95) BS01 CLA ? GO:0009523 ... D0VWR4 37209822
    816550 8gn2:z (1.95) BS01 peptide ? GO:0009523 ... D0VWR5 37209822
    816551 8gn3:A (1.8) BS01 dna ? N/A Q96DT7 36657642
    816552 8gn3:A (1.8) BS02 dna ? N/A Q96DT7 36657642
    816553 8gn3:A (1.8) BS03 dna ? N/A Q96DT7 36657642
    816554 8gn3:A (1.8) BS04 ZN ? N/A Q96DT7 36657642
    816555 8gn3:A (1.8) BS05 ZN ? N/A Q96DT7 36657642
    816556 8gn3:B (1.8) BS01 dna ? N/A Q96DT7 36657642
    816557 8gn3:B (1.8) BS02 dna ? N/A Q96DT7 36657642
    816558 8gn3:B (1.8) BS03 ZN ? N/A Q96DT7 36657642
    816559 8gn3:B (1.8) BS04 ZN ? N/A Q96DT7 36657642
    816560 8gn4:A (1.9) BS01 dna ? N/A Q96DT7 36657642
    816561 8gn4:A (1.9) BS02 dna ? N/A Q96DT7 36657642
    816562 8gn4:A (1.9) BS03 ZN ? N/A Q96DT7 36657642
    816563 8gn4:A (1.9) BS04 ZN ? N/A Q96DT7 36657642
    816564 8gna:A (2.8) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36484100
    816565 8gna:A (2.8) BS02 rna ? GO:0051607 ... A0A0B0EGF3 36484100
    816566 8gna:A (2.8) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36484100
    816567 8gna:A (2.8) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36484100
    816568 8gna:A (2.8) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36484100
    816569 8gna:A (2.8) BS06 ZN ? GO:0051607 ... A0A0B0EGF3 36484100
    816570 8gne:A (2.3) BS01 JQR ? GO:0001609 ... P0ABE7
    P29274
    36894319
    816571 8gne:A (2.3) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    36894319
    816572 8gne:A (2.3) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    36894319
    816573 8gne:A (2.3) BS04 CLR ? GO:0001609 ... P0ABE7
    P29274
    36894319
    816574 8gng:A (3.2) BS01 JQ9 ? GO:0001609 ... P29274 36894319
    816575 8gng:X (3.2) BS01 JQ9 ? GO:0001609 ... P29274 36894319
    816576 8gni:A (3.74) BS01 NMN 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 36550129
    816577 8gnj:A (3.78) BS01 NMN 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1 36550129
    816578 8gnk:A (3.1) BS01 CL ? GO:0003333 ... P23978 37400654
    816579 8gnk:A (3.1) BS02 NA ? GO:0003333 ... P23978 37400654
    816580 8gnk:A (3.1) BS03 ABU ? GO:0003333 ... P23978 37400654
    816581 8gnk:A (3.1) BS04 CLR ? GO:0003333 ... P23978 37400654
    816582 8gnk:A (3.1) BS05 CLR ? GO:0003333 ... P23978 37400654
    816583 8gnk:A (3.1) BS06 CLR ? GO:0003333 ... P23978 37400654
    816584 8gnk:A (3.1) BS07 CLR ? GO:0003333 ... P23978 37400654
    816585 8gnk:A (3.1) BS08 CLR ? GO:0003333 ... P23978 37400654
    816586 8gnn:C (2.119) BS01 peptide 3.1.11.2 GO:0000077 ... O60671 36841485
    816587 8go3:A (3.09) BS01 HEM 7.1.1.3 GO:0004129 ... P0ABI8 N/A
    816588 8go3:A (3.09) BS02 HEO 7.1.1.3 GO:0004129 ... P0ABI8 N/A
    816589 8go3:A (3.09) BS03 CU 7.1.1.3 GO:0004129 ... P0ABI8 N/A
    816590 8go3:A (3.09) BS04 UQ8 7.1.1.3 GO:0004129 ... P0ABI8 N/A
    816591 8go3:B (3.09) BS01 HEO ? GO:0004129 ... P0ABJ1 N/A
    816592 8go8:A (3.41) BS01 peptide ? GO:0000785 ... P29066 37209686
    816593 8go8:B (3.41) BS01 peptide ? GO:0000785 ... P29066 37209686
    816594 8go8:L (3.41) BS01 peptide N/A N/A N/A 37209686
    816595 8go8:M (3.41) BS01 peptide N/A N/A N/A 37209686
    816596 8go9:A (3.35) BS01 peptide ? GO:0000822 ... P32120 38175886
    816597 8go9:A (3.35) BS02 peptide ? GO:0000822 ... P32120 38175886
    816598 8go9:C (3.35) BS01 peptide N/A N/A N/A 38175886
    816599 8go9:E (3.35) BS01 peptide N/A N/A N/A 38175886
    816600 8go9:F (3.35) BS01 peptide ? GO:0000822 ... P32120 38175886

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).