SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    81601 2emv:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81602 2emw:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81603 2emx:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81604 2emy:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81605 2emz:A (-1.00) BS01 ZN ? N/A Q9Y2L8 N/A
    81606 2en0:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81607 2en1:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81608 2en2:A (-1.00) BS01 ZN ? N/A P41182 N/A
    81609 2en3:A (-1.00) BS01 ZN ? N/A Q9Y2L8 N/A
    81610 2en4:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81611 2en5:A (1.9) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81612 2en6:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81613 2en7:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81614 2en8:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81615 2en9:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81616 2ena:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81617 2enb:A (2.05) BS01 THP 3.1.31.1 GO:0003676 ... P00644 8025105
    81618 2enc:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81619 2ene:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81620 2enf:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81621 2enh:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81622 2eni:A (2.5) BS01 SAH 2.1.1.98 GO:0004164 ... O58456 N/A
    81623 2enn:A (-1.00) BS01 ZN 2.7.11.13 N/A Q04759 N/A
    81624 2enn:A (-1.00) BS02 ZN 2.7.11.13 N/A Q04759 N/A
    81625 2enr:A (2.35) BS01 CD ? GO:0030246 ... P02866 11092923
    81626 2enr:A (2.35) BS02 CD ? GO:0030246 ... P02866 11092923
    81627 2ent:A (-1.00) BS01 ZN ? N/A Q9UIH9 N/A
    81628 2env:A (-1.00) BS01 ZN ? GO:0003700 ... Q03181 N/A
    81629 2env:A (-1.00) BS02 ZN ? GO:0003700 ... Q03181 N/A
    81630 2enx:A (2.8) BS01 MN 3.6.1.1 GO:0004427 ... Q3K0B5 17505113
    81631 2enx:A (2.8) BS02 MN 3.6.1.1 GO:0004427 ... Q3K0B5 17505113
    81632 2enx:A (2.8) BS03 2PN 3.6.1.1 GO:0004427 ... Q3K0B5 17505113
    81633 2enx:A (2.8) BS04 TRP 3.6.1.1 GO:0004427 ... Q3K0B5 17505113
    81634 2enx:B (2.8) BS01 MN 3.6.1.1 GO:0004427 ... Q3K0B5 17505113
    81635 2enx:B (2.8) BS02 MN 3.6.1.1 GO:0004427 ... Q3K0B5 17505113
    81636 2enx:B (2.8) BS03 2PN 3.6.1.1 GO:0004427 ... Q3K0B5 17505113
    81637 2enx:B (2.8) BS04 TRP 3.6.1.1 GO:0004427 ... Q3K0B5 17505113
    81638 2enz:A (-1.00) BS01 ZN 2.7.11.13 N/A Q04759 N/A
    81639 2enz:A (-1.00) BS02 ZN 2.7.11.13 N/A Q04759 N/A
    81640 2eo4:A (1.8) BS01 ZN ? GO:0003824 ... Q96YM2 N/A
    81641 2eo5:A (1.9) BS01 PLP 2.6.1.19 GO:0030170 ... F9VN77 N/A
    81642 2eo7:A (1.75) BS01 BGC 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    81643 2eo7:A (1.75) BS02 BGC 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    81644 2eo7:A (1.75) BS03 BGC 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    81645 2eo7:A (1.75) BS04 BGC 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    81646 2eo7:A (1.75) BS05 ZN 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    81647 2eo7:A (1.75) BS06 CA 3.2.1.151'
    '3.2.1.4
    N/A P71140 17905739
    81648 2eod:A (-1.00) BS01 ZN 2.3.2.27 GO:0008270 ... Q9BUZ4 N/A
    81649 2eod:A (-1.00) BS02 ZN 2.3.2.27 GO:0008270 ... Q9BUZ4 N/A
    81650 2eoe:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81651 2eof:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81652 2eog:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81653 2eoh:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81654 2eoi:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81655 2eoj:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81656 2eok:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81657 2eol:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81658 2eom:A (-1.00) BS01 ZN ? N/A Q9Y2L8 N/A
    81659 2eon:A (-1.00) BS01 ZN ? N/A Q9Y2L8 N/A
    81660 2eoo:A (-1.00) BS01 ZN ? N/A Q9Y2L8 N/A
    81661 2eop:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81662 2eoq:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81663 2eor:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81664 2eos:A (-1.00) BS01 ZN ? N/A P41182 N/A
    81665 2eou:A (-1.00) BS01 ZN ? N/A Q8WTR7 N/A
    81666 2eov:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81667 2eow:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81668 2eox:A (-1.00) BS01 ZN ? N/A Q8WTR7 N/A
    81669 2eoy:A (-1.00) BS01 ZN ? N/A Q8WTR7 N/A
    81670 2eoz:A (-1.00) BS01 ZN ? N/A Q8WTR7 N/A
    81671 2ep0:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81672 2ep1:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81673 2ep2:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81674 2ep3:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81675 2ep4:A (-1.00) BS01 ZN ? GO:0008270 ... Q9Y225 N/A
    81676 2ep4:A (-1.00) BS02 ZN ? GO:0008270 ... Q9Y225 N/A
    81677 2ep7:A (2.3) BS01 NAD 1.2.1.12 GO:0004365 ... O67161 N/A
    81678 2ep7:B (2.3) BS01 NAD 1.2.1.12 GO:0004365 ... O67161 N/A
    81679 2epa:A (-1.00) BS01 ZN ? N/A Q13118 N/A
    81680 2epa:A (-1.00) BS02 ZN ? N/A Q13118 N/A
    81681 2epc:A (-1.00) BS01 ZN ? N/A P17041 N/A
    81682 2epf:A (2.3) BS01 ZN ? GO:0005576 ... Q8AVA3 18931410
    81683 2epf:B (2.3) BS01 ZN ? GO:0005576 ... Q8AVA3 18931410
    81684 2epf:C (2.3) BS01 ZN ? GO:0005576 ... Q8AVA3 18931410
    81685 2epf:D (2.3) BS01 ZN ? GO:0005576 ... Q8AVA3 18931410
    81686 2eph:D (2.7) BS01 peptide 4.1.2.13 GO:0003779 ... P14223 17426153
    81687 2epj:A (1.7) BS01 PMP 5.4.3.8 GO:0005737 ... Q9Y9I9 N/A
    81688 2epn:A (1.61) BS01 NGT 3.2.1.52 GO:0004563 ... Q6ST21 18237743 MOAD: Ki=60nM
    81689 2epn:B (1.61) BS01 NGT 3.2.1.52 GO:0004563 ... Q6ST21 18237743 MOAD: Ki=60nM
    81690 2epp:A (-1.00) BS01 ZN ? N/A Q9HBE1 N/A
    81691 2epq:A (-1.00) BS01 ZN ? N/A Q9HBE1 N/A
    81692 2epr:A (-1.00) BS01 ZN ? N/A Q9HBE1 N/A
    81693 2eps:A (-1.00) BS01 ZN ? N/A Q9HBE1 N/A
    81694 2ept:A (-1.00) BS01 ZN ? N/A P17041 N/A
    81695 2epu:A (-1.00) BS01 ZN ? N/A P17041 N/A
    81696 2epv:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81697 2epw:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81698 2epx:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81699 2epy:A (-1.00) BS01 ZN ? N/A Q14587 N/A
    81700 2epz:A (-1.00) BS01 ZN ? N/A Q8NHY6 N/A
    81701 2eq0:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81702 2eq1:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81703 2eq2:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81704 2eq3:A (-1.00) BS01 ZN ? N/A Q96SE7 N/A
    81705 2eq4:A (-1.00) BS01 ZN ? N/A Q9NZL3 N/A
    81706 2eq6:A (1.6) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81707 2eq6:B (1.6) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81708 2eq7:A (1.8) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLK6 N/A
    81709 2eq7:A (1.8) BS02 NAD 1.8.1.4 GO:0004148 ... Q5SLK6 N/A
    81710 2eq7:B (1.8) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLK6 N/A
    81711 2eq7:B (1.8) BS02 NAD 1.8.1.4 GO:0004148 ... Q5SLK6 N/A
    81712 2eq8:A (1.94) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81713 2eq8:B (1.94) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81714 2eq8:D (1.94) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81715 2eq8:E (1.94) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81716 2eq9:A (2.09) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81717 2eq9:B (2.09) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81718 2eq9:D (2.09) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81719 2eq9:E (2.09) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81720 2eq9:G (2.09) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81721 2eq9:H (2.09) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81722 2eq9:J (2.09) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81723 2eq9:K (2.09) BS01 FAD 1.8.1.4 GO:0004148 ... Q5SLR0 N/A
    81724 2eqa:A (1.8) BS01 AMP 2.7.7.87 GO:0000049 ... Q970S6 18004774
    81725 2eqb:C (2.7) BS01 PO4 ? GO:0005085 ... P17065 17488829
    81726 2eqd:A (2.8) BS01 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81727 2eqd:A (2.8) BS02 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81728 2eqd:A (2.8) BS03 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81729 2eqd:A (2.8) BS04 BGC 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81730 2eqd:A (2.8) BS05 ZN 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81731 2eqd:A (2.8) BS06 CA 3.2.1.151'
    '3.2.1.4
    N/A A3DD30 17905739
    81732 2eqe:A (-1.00) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 N/A
    81733 2eqf:A (-1.00) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 N/A
    81734 2eqg:A (-1.00) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 N/A
    81735 2eqw:A (-1.00) BS01 ZN ? N/A Q5JVG2 N/A
    81736 2er0:E (3.0) BS01 peptide 3.4.23.22 GO:0004190 ... P11838 2690945
    81737 2er6:E (2.0) BS01 peptide 3.4.23.22 GO:0004190 ... P11838 3119339
    81738 2er7:E (1.6) BS01 peptide 3.4.23.22 GO:0004190 ... P11838 2266553
    81739 2er8:A (2.85) BS01 dna ? GO:0000981 ... P08638 16615914
    81740 2er8:A (2.85) BS02 dna ? GO:0000981 ... P08638 16615914
    81741 2er8:A (2.85) BS03 ZN ? GO:0000981 ... P08638 16615914
    81742 2er8:A (2.85) BS04 ZN ? GO:0000981 ... P08638 16615914
    81743 2er8:B (2.85) BS01 dna ? GO:0000981 ... P08638 16615914
    81744 2er8:B (2.85) BS02 dna ? GO:0000981 ... P08638 16615914
    81745 2er8:B (2.85) BS03 ZN ? GO:0000981 ... P08638 16615914
    81746 2er8:B (2.85) BS04 ZN ? GO:0000981 ... P08638 16615914
    81747 2er8:C (2.85) BS01 dna ? GO:0000981 ... P08638 16615914
    81748 2er8:C (2.85) BS02 dna ? GO:0000981 ... P08638 16615914
    81749 2er8:C (2.85) BS03 ZN ? GO:0000981 ... P08638 16615914
    81750 2er8:C (2.85) BS04 ZN ? GO:0000981 ... P08638 16615914
    81751 2er8:D (2.85) BS01 dna ? GO:0000981 ... P08638 16615914
    81752 2er8:D (2.85) BS02 dna ? GO:0000981 ... P08638 16615914
    81753 2er8:D (2.85) BS03 ZN ? GO:0000981 ... P08638 16615914
    81754 2er8:D (2.85) BS04 ZN ? GO:0000981 ... P08638 16615914
    81755 2er9:E (2.2) BS01 peptide 3.4.23.22 GO:0004190 ... P11838 2690945
    81756 2ere:A (3.0) BS01 dna ? GO:0000981 ... P08638 16615914
    81757 2ere:A (3.0) BS02 dna ? GO:0000981 ... P08638 16615914
    81758 2ere:A (3.0) BS03 ZN ? GO:0000981 ... P08638 16615914
    81759 2ere:A (3.0) BS04 ZN ? GO:0000981 ... P08638 16615914
    81760 2ere:B (3.0) BS01 dna ? GO:0000981 ... P08638 16615914
    81761 2ere:B (3.0) BS02 dna ? GO:0000981 ... P08638 16615914
    81762 2ere:B (3.0) BS03 ZN ? GO:0000981 ... P08638 16615914
    81763 2ere:B (3.0) BS04 ZN ? GO:0000981 ... P08638 16615914
    81764 2erg:A (3.15) BS01 dna ? GO:0000981 ... P08638 16615914
    81765 2erg:A (3.15) BS02 dna ? GO:0000981 ... P08638 16615914
    81766 2erg:A (3.15) BS03 ZN ? GO:0000981 ... P08638 16615914
    81767 2erg:A (3.15) BS04 ZN ? GO:0000981 ... P08638 16615914
    81768 2erg:B (3.15) BS01 dna ? GO:0000981 ... P08638 16615914
    81769 2erg:B (3.15) BS02 dna ? GO:0000981 ... P08638 16615914
    81770 2erg:B (3.15) BS03 ZN ? GO:0000981 ... P08638 16615914
    81771 2erg:B (3.15) BS04 ZN ? GO:0000981 ... P08638 16615914
    81772 2erj:B (3.0) BS01 FUC ? GO:0004896 ... P14784 16477002
    81773 2erj:B (3.0) BS02 FUC ? GO:0004896 ... P14784 16477002
    81774 2erj:F (3.0) BS01 FUC ? GO:0004896 ... P14784 16477002
    81775 2erm:A (-1.00) BS01 IDS ? GO:0001658 ... P05230 16995857
    81776 2erm:A (-1.00) BS02 GNS ? GO:0001658 ... P05230 16995857
    81777 2erm:A (-1.00) BS03 IDR ? GO:0001658 ... P05230 16995857
    81778 2erm:A (-1.00) BS04 NGY ? GO:0001658 ... P05230 16995857
    81779 2erm:A (-1.00) BS05 IDS ? GO:0001658 ... P05230 16995857
    81780 2erm:A (-1.00) BS06 GNS ? GO:0001658 ... P05230 16995857
    81781 2ero:A (2.5) BS01 ZN 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81782 2ero:A (2.5) BS02 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81783 2ero:A (2.5) BS03 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81784 2ero:A (2.5) BS04 3CO 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81785 2ero:B (2.5) BS01 ZN 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81786 2ero:B (2.5) BS02 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81787 2ero:B (2.5) BS03 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81788 2erp:A (2.95) BS01 ZN 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81789 2erp:A (2.95) BS02 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81790 2erp:A (2.95) BS03 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81791 2erp:A (2.95) BS04 3CO 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81792 2erp:A (2.95) BS05 GM6 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81793 2erp:B (2.95) BS01 ZN 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81794 2erp:B (2.95) BS02 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81795 2erp:B (2.95) BS03 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81796 2erp:B (2.95) BS04 GM6 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81797 2erq:A (2.5) BS01 ZN 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81798 2erq:A (2.5) BS02 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81799 2erq:A (2.5) BS03 CA 3.4.24.- GO:0004222 ... Q9DGB9 16688218
    81800 2erq:B (2.5) BS01 ZN 3.4.24.- GO:0004222 ... Q9DGB9 16688218

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).