SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    818601 8h43:A (2.3) BS01 1HI ? N/A O43189 N/A
    818602 8h43:B (2.3) BS01 1HI ? N/A O43189 N/A
    818603 8h43:C (2.3) BS01 1HI ? N/A O43189 N/A
    818604 8h44:A (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818605 8h44:A (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818606 8h44:B (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818607 8h44:B (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818608 8h44:B (1.8) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818609 8h45:A (1.97) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818610 8h45:A (1.97) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818611 8h45:B (1.97) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818612 8h45:B (1.97) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818613 8h45:B (1.97) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818614 8h46:A (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818615 8h46:A (1.8) BS02 ASN ? GO:0004067 ... A0A6I7U6Y2 N/A
    818616 8h46:B (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818617 8h46:B (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818618 8h46:B (1.8) BS03 ASN ? GO:0004067 ... A0A6I7U6Y2 N/A
    818619 8h47:A (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818620 8h47:B (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818621 8h48:A (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818622 8h48:A (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818623 8h48:A (1.8) BS03 ASN ? GO:0004067 ... A0A6I7U6Y2 N/A
    818624 8h48:B (1.8) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818625 8h48:B (1.8) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818626 8h48:B (1.8) BS03 ASN ? GO:0004067 ... A0A6I7U6Y2 N/A
    818627 8h49:A (2.0) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818628 8h49:B (2.0) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818629 8h49:B (2.0) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818630 8h49:B (2.0) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818631 8h4a:A (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818632 8h4a:A (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818633 8h4a:B (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818634 8h4a:B (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818635 8h4a:B (1.9) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818636 8h4b:A (2.0) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818637 8h4b:A (2.0) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818638 8h4b:A (2.0) BS03 ASN ? GO:0004067 ... A0A6I7U6Y2 N/A
    818639 8h4b:B (2.0) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818640 8h4c:A (1.6) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818641 8h4c:A (1.6) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818642 8h4c:B (1.6) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818643 8h4c:B (1.6) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818644 8h4c:B (1.6) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818645 8h4d:A (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818646 8h4d:A (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818647 8h4d:B (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818648 8h4d:B (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818649 8h4d:B (1.9) BS03 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818650 8h4e:A (2.06) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818651 8h4e:A (2.06) BS02 DSG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818652 8h4e:B (2.06) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818653 8h4e:B (2.06) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818654 8h4e:B (2.06) BS03 DSG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818655 8h4f:A (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818656 8h4f:A (1.9) BS02 DSG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818657 8h4f:B (1.9) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818658 8h4f:B (1.9) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818659 8h4f:B (1.9) BS03 DSG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818660 8h4g:A (1.81) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818661 8h4g:A (1.81) BS02 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818662 8h4g:B (1.81) BS01 MG ? GO:0004067 ... A0A6I7U6Y2 N/A
    818663 8h4h:A (2.3) BS01 PLP ? N/A E3RT21 N/A
    818664 8h4h:N (2.3) BS01 PLP ? N/A E3RT21 N/A
    818665 8h4i:R (3.06) BS01 HXA ? GO:0001818 ... Q5NUL3 37286793
    818666 8h4j:A (2.0) BS01 FMN 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818667 8h4j:A (2.0) BS02 1IE 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818668 8h4j:B (2.0) BS01 FMN 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818669 8h4j:B (2.0) BS02 1IE 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818670 8h4j:C (2.0) BS01 FMN 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818671 8h4j:D (2.0) BS01 FMN 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818672 8h4j:D (2.0) BS02 1IE 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818673 8h4j:E (2.0) BS01 FMN 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818674 8h4j:E (2.0) BS02 1IE 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818675 8h4j:F (2.0) BS01 FMN 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818676 8h4j:F (2.0) BS02 1IE 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818677 8h4j:G (2.0) BS01 FMN 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818678 8h4j:G (2.0) BS02 1IE 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818679 8h4j:H (2.0) BS01 FMN 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818680 8h4j:H (2.0) BS02 1IE 1.6.5.-
    1.7.1.17    		 GO:0000166 ... W8UQZ7 N/A
    818681 8h4k:R (3.1) BS01 WPT ? GO:0001818 ... Q5NUL3 37286793
    818682 8h4l:R (3.07) BS01 HXA ? GO:0001818 ... Q5NUL3 37286793
    818683 8h4m:A (1.68) BS01 GTP 3.6.5.- GO:0003924 ... Q3T9E4 N/A
    818684 8h4p:A (1.47) BS01 BTM 4.2.3.- GO:0016829 ... I1S104 37018048
    818685 8h4p:A (1.47) BS02 MG 4.2.3.- GO:0016829 ... I1S104 37018048
    818686 8h4p:B (1.47) BS01 BTM 4.2.3.- GO:0016829 ... I1S104 37018048
    818687 8h4p:B (1.47) BS02 MG 4.2.3.- GO:0016829 ... I1S104 37018048
    818688 8h4q:A (2.22) BS01 P1T ? N/A E3RT21 N/A
    818689 8h4q:N (2.22) BS01 P1T ? N/A E3RT21 N/A
    818690 8h4r:A (2.75) BS01 1QK 2.5.1.18
    2.7.11.22    		 GO:0000082 ... P08515
    Q00526    		 37104883
    818691 8h4v:A (2.4) BS01 L6N ? N/A E1BHM0 37521780
    818692 8h4v:A (2.4) BS02 CA ? N/A E1BHM0 37521780
    818693 8h4v:A (2.4) BS03 CA ? N/A E1BHM0 37521780
    818694 8h4v:A (2.4) BS04 CA ? N/A E1BHM0 37521780
    818695 8h4v:B (2.4) BS01 L6N ? N/A E1BHM0 37521780
    818696 8h4v:B (2.4) BS02 CA ? N/A E1BHM0 37521780
    818697 8h4v:B (2.4) BS03 CA ? N/A E1BHM0 37521780
    818698 8h4v:B (2.4) BS04 CA ? N/A E1BHM0 37521780
    818699 8h4x:A () BS01 ZN ? N/A N/A N/A
    818700 8h4x:A () BS02 ZN ? N/A N/A N/A
    818701 8h4x:A () BS03 ZN ? N/A N/A N/A
    818702 8h4x:A () BS04 ZN ? N/A N/A N/A
    818703 8h4x:A () BS05 ZN ? N/A N/A N/A
    818704 8h4x:B () BS01 ZN ? N/A N/A N/A
    818705 8h4x:B () BS02 ZN ? N/A N/A N/A
    818706 8h4y:A (2.25) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 37696289
    818707 8h51:A (2.18) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 37696289
    818708 8h52:A (3.1) BS01 NAP N/A N/A N/A 36283333
    818709 8h53:A (2.16) BS01 4AD 6.1.1.22 GO:0000166 ... O43776 38297033
    818710 8h53:A (2.16) BS02 2PN 6.1.1.22 GO:0000166 ... O43776 38297033
    818711 8h53:B (2.16) BS01 4AD 6.1.1.22 GO:0000166 ... O43776 38297033
    818712 8h53:B (2.16) BS02 2PN 6.1.1.22 GO:0000166 ... O43776 38297033
    818713 8h53:C (2.16) BS01 4AD 6.1.1.22 GO:0000166 ... O43776 38297033
    818714 8h53:C (2.16) BS02 2PN 6.1.1.22 GO:0000166 ... O43776 38297033
    818715 8h53:D (2.16) BS01 4AD 6.1.1.22 GO:0000166 ... O43776 38297033
    818716 8h53:D (2.16) BS02 2PN 6.1.1.22 GO:0000166 ... O43776 38297033
    818717 8h57:A (1.55) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 37696289
    818718 8h59:A (2.15) BS01 KR9 2.7.11.24 GO:0000196 ... G4N374 36779710
    818719 8h5a:A (2.803) BS01 7DV ? N/A P67660 37822509
    818720 8h5a:A (2.803) BS02 7DV ? N/A P67660 37822509
    818721 8h5a:B (2.803) BS01 7DV ? N/A P67660 37822509
    818722 8h5a:B (2.803) BS02 7DV ? N/A P67660 37822509
    818723 8h5a:C (2.803) BS01 7DV ? N/A P67660 37822509
    818724 8h5a:C (2.803) BS02 7DV ? N/A P67660 37822509
    818725 8h5a:D (2.803) BS01 7DV ? N/A P67660 37822509
    818726 8h5a:D (2.803) BS02 7DV ? N/A P67660 37822509
    818727 8h5a:D (2.803) BS03 7DV ? N/A P67660 37822509
    818728 8h5a:E (2.803) BS01 7DV ? N/A P67660 37822509
    818729 8h5a:E (2.803) BS02 7DV ? N/A P67660 37822509
    818730 8h5a:E (2.803) BS03 7DV ? N/A P67660 37822509
    818731 8h5a:F (2.803) BS01 7DV ? N/A P67660 37822509
    818732 8h5a:F (2.803) BS02 7DV ? N/A P67660 37822509
    818733 8h5a:G (2.803) BS01 7DV ? N/A P67660 37822509
    818734 8h5a:G (2.803) BS02 7DV ? N/A P67660 37822509
    818735 8h5a:G (2.803) BS03 7DV ? N/A P67660 37822509
    818736 8h5a:H (2.803) BS01 7DV ? N/A P67660 37822509
    818737 8h5a:H (2.803) BS02 7DV ? N/A P67660 37822509
    818738 8h5a:H (2.803) BS03 7DV ? N/A P67660 37822509
    818739 8h5a:I (2.803) BS01 7DV ? N/A P67660 37822509
    818740 8h5a:I (2.803) BS02 7DV ? N/A P67660 37822509
    818741 8h5a:J (2.803) BS01 7DV ? N/A P67660 37822509
    818742 8h5a:J (2.803) BS02 7DV ? N/A P67660 37822509
    818743 8h5a:K (2.803) BS01 7DV ? N/A P67660 37822509
    818744 8h5a:K (2.803) BS02 7DV ? N/A P67660 37822509
    818745 8h5a:L (2.803) BS01 7DV ? N/A P67660 37822509
    818746 8h5a:L (2.803) BS02 7DV ? N/A P67660 37822509
    818747 8h5a:M (2.803) BS01 7DV ? N/A P67660 37822509
    818748 8h5a:M (2.803) BS02 7DV ? N/A P67660 37822509
    818749 8h5a:N (2.803) BS01 7DV ? N/A P67660 37822509
    818750 8h5a:N (2.803) BS02 7DV ? N/A P67660 37822509
    818751 8h5a:O (2.803) BS01 7DV ? N/A P67660 37822509
    818752 8h5a:P (2.803) BS01 7DV ? N/A P67660 37822509
    818753 8h5a:P (2.803) BS02 7DV ? N/A P67660 37822509
    818754 8h5a:P (2.803) BS03 7DV ? N/A P67660 37822509
    818755 8h5c:A (2.9) BS01 ZN 3.4.17.-
    3.4.17.23    		 GO:0006508 ... Q9BYF1 37479708
    818756 8h5d:A (2.5) BS01 UDP 2.4.1.- GO:0008194 ... O31853 N/A
    818757 8h5d:B (2.5) BS01 UDP 2.4.1.- GO:0008194 ... O31853 N/A
    818758 8h5e:A (2.5) BS01 CA ? GO:0006812 ... Q5SMG8 36465111
    818759 8h5f:A (1.79) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 37696289
    818760 8h5m:A (1.89) BS01 MG 3.1.1.101 GO:0005576 ... A0A0K8P6T7 N/A
    818761 8h5p:A (1.67) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 37696289
    818762 8h5y:A (2.7001) BS01 ZN 3.6.4.12 GO:0003677 ... P33919 36614183
    818763 8h5y:A (2.7001) BS02 ADP 3.6.4.12 GO:0003677 ... P33919 36614183
    818764 8h5y:A (2.7001) BS03 MG 3.6.4.12 GO:0003677 ... P33919 36614183
    818765 8h5y:B (2.7001) BS01 ZN 3.6.4.12 GO:0003677 ... P33919 36614183
    818766 8h5y:B (2.7001) BS02 ADP 3.6.4.12 GO:0003677 ... P33919 36614183
    818767 8h5y:B (2.7001) BS03 MG 3.6.4.12 GO:0003677 ... P33919 36614183
    818768 8h5z:A (3.00003) BS01 AGS 3.6.4.12 GO:0003677 ... P33919 36614183
    818769 8h5z:A (3.00003) BS02 ZN 3.6.4.12 GO:0003677 ... P33919 36614183
    818770 8h5z:B (3.00003) BS01 AGS 3.6.4.12 GO:0003677 ... P33919 36614183
    818771 8h5z:B (3.00003) BS02 ZN 3.6.4.12 GO:0003677 ... P33919 36614183
    818772 8h61:B (1.9) BS01 NDP ? GO:0000166 ... G8B6C8 N/A
    818773 8h62:A (1.91) BS01 CA ? N/A P0DJM0 37716701
    818774 8h62:B (1.91) BS01 CA ? GO:0005509 ... P12830 37716701
    818775 8h62:B (1.91) BS02 CA ? GO:0005509 ... P12830 37716701
    818776 8h62:B (1.91) BS03 CA ? GO:0005509 ... P12830 37716701
    818777 8h65:A (3.0) BS01 BCO 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818778 8h65:B (3.0) BS01 BCO 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818779 8h65:C (3.0) BS01 BCO 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818780 8h65:D (3.0) BS01 BCO 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818781 8h65:E (3.0) BS01 BCO 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818782 8h65:F (3.0) BS01 BCO 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818783 8h65:G (3.0) BS01 BCO 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818784 8h65:H (3.0) BS01 BCO 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818785 8h66:A (2.8) BS01 1VU 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818786 8h66:B (2.8) BS01 1VU 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818787 8h66:C (2.8) BS01 1VU 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818788 8h66:D (2.8) BS01 1VU 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818789 8h66:E (2.8) BS01 1VU 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818790 8h66:F (2.8) BS01 1VU 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818791 8h66:G (2.8) BS01 1VU 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818792 8h66:H (2.8) BS01 1VU 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92830 37040526
    818793 8h67:A (3.8) BS01 rna ? GO:0051607 ... A0A068N1Y0 38750051
    818794 8h67:E (3.8) BS01 rna ? N/A A0A068N458 38750051
    818795 8h67:E (3.8) BS02 dna ? N/A A0A068N458 38750051
    818796 8h67:F (3.8) BS01 rna ? N/A A0A068N458 38750051
    818797 8h67:G (3.8) BS01 rna ? N/A A0A068N458 38750051
    818798 8h67:H (3.8) BS01 rna ? N/A A0A068N458 38750051
    818799 8h67:I (3.8) BS01 rna ? N/A A0A068N458 38750051
    818800 8h67:J (3.8) BS01 rna ? N/A A0A068N458 38750051
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).