SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    819201 8h8s:N (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    819202 8h8s:N (1.7) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    819203 8h8s:N (1.7) BS04 CU 7.1.1.9 GO:0004129 ... P00396 36708913
    819204 8h8s:N (1.7) BS05 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    819205 8h8s:N (1.7) BS06 CA 7.1.1.9 GO:0004129 ... P00396 36708913
    819206 8h8s:N (1.7) BS07 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    819207 8h8s:N (1.7) BS08 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    819208 8h8s:O (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 36708913
    819209 8h8s:O (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    819210 8h8s:O (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P68530 36708913
    819211 8h8s:P (1.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    819212 8h8s:P (1.7) BS02 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    819213 8h8s:P (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    819214 8h8s:P (1.7) BS04 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    819215 8h8s:Q (1.7) BS01 DMU ? GO:0006123 ... P00423 36708913
    819216 8h8s:S (1.7) BS01 ZN ? GO:0005740 ... P00428 36708913
    819217 8h8s:T (1.7) BS01 DMU ? GO:0005743 ... P07471 36708913
    819218 8h8s:U (1.7) BS01 DMU ? GO:0005739 ... P00429 36708913
    819219 8h8s:W (1.7) BS01 DMU ? GO:0006123 ... P07470 36708913
    819220 8h8s:W (1.7) BS02 DMU ? GO:0006123 ... P07470 36708913
    819221 8h8s:Y (1.7) BS01 DMU ? GO:0006123 ... P00430 36708913
    819222 8h8s:Z (1.7) BS01 DMU ? GO:0006123 ... P10175 36708913
    819223 8h92:A (2.6) BS01 MG ? N/A A0A6P3ZKP6 N/A
    819224 8h92:B (2.6) BS01 MG ? N/A A0A6P3ZKP6 N/A
    819225 8h97:A (2.194) BS01 CA 3.2.1.81 N/A A0A516RTC5 36746585
    819226 8h97:A (2.194) BS02 CA 3.2.1.81 N/A A0A516RTC5 36746585
    819227 8h98:A (2.5) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819228 8h98:A (2.5) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819229 8h98:B (2.5) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819230 8h98:B (2.5) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819231 8h99:A (1.94) BS01 ATP 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819232 8h99:A (1.94) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819233 8h99:B (1.94) BS01 ATP 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819234 8h99:B (1.94) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819235 8h9a:A (1.9) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819236 8h9a:A (1.9) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819237 8h9b:A (2.23) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819238 8h9b:A (2.23) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819239 8h9c:A (2.15) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819240 8h9c:A (2.15) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    819241 8h9d:A (3.1) BS01 rna N/A N/A N/A 36917574
    819242 8h9e:A (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    819243 8h9e:B (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    819244 8h9e:C (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    819245 8h9e:D (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819246 8h9e:E (2.53) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    819247 8h9e:F (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819248 8h9h:G (2.2) BS01 dna ? N/A O95365 37013936
    819249 8h9h:G (2.2) BS02 dna ? N/A O95365 37013936
    819250 8h9h:G (2.2) BS03 peptide ? N/A O95365 37013936
    819251 8h9h:G (2.2) BS04 ZN ? N/A O95365 37013936
    819252 8h9h:G (2.2) BS05 ZN ? N/A O95365 37013936
    819253 8h9h:G (2.2) BS06 ZN ? N/A O95365 37013936
    819254 8h9i:A (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    819255 8h9i:B (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    819256 8h9i:B (2.77) BS02 MG ? GO:0001937 ... P25705 37244256
    819257 8h9i:C (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    819258 8h9i:D (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819259 8h9i:E (2.77) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    819260 8h9i:F (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819261 8h9i:F (2.77) BS02 MG 7.1.2.2 GO:0001525 ... P06576 37244256
    819262 8h9l:A (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    819263 8h9l:B (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    819264 8h9l:C (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    819265 8h9l:D (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819266 8h9l:D (2.61) BS02 MG 7.1.2.2 GO:0001525 ... P06576 37244256
    819267 8h9l:E (2.61) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    819268 8h9l:F (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819269 8h9p:A (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    819270 8h9p:B (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    819271 8h9p:B (3.02) BS02 MG ? GO:0001937 ... P25705 37244256
    819272 8h9p:B (3.02) BS03 ADP ? GO:0001937 ... P25705 37244256
    819273 8h9p:C (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    819274 8h9p:C (3.02) BS02 MG ? GO:0001937 ... P25705 37244256
    819275 8h9p:D (3.02) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819276 8h9p:E (3.02) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    819277 8h9p:F (3.02) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819278 8h9s:A (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    819279 8h9s:B (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    819280 8h9s:C (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    819281 8h9s:D (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819282 8h9s:E (2.53) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    819283 8h9s:F (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819284 8h9t:A (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    819285 8h9t:B (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    819286 8h9t:B (2.77) BS02 MG ? GO:0001937 ... P25705 37244256
    819287 8h9t:C (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    819288 8h9t:D (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819289 8h9t:E (2.77) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    819290 8h9t:F (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819291 8h9u:A (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    819292 8h9u:B (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    819293 8h9u:C (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    819294 8h9u:D (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819295 8h9u:E (2.61) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    819296 8h9u:F (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819297 8h9v:A (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    819298 8h9v:B (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    819299 8h9v:B (3.02) BS02 MG ? GO:0001937 ... P25705 37244256
    819300 8h9v:B (3.02) BS03 ADP ? GO:0001937 ... P25705 37244256
    819301 8h9v:C (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    819302 8h9v:D (3.02) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819303 8h9v:F (3.02) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    819304 8h9v:F (3.02) BS02 MG 7.1.2.2 GO:0001525 ... P06576 37244256
    819305 8h9w:A (2.7) BS01 1N7 ? GO:0001518 ... A8EVM5 37454189
    819306 8h9z:A (1.42) BS01 CA ? GO:0001786 ... P08758 N/A
    819307 8h9z:A (1.42) BS02 CA ? GO:0001786 ... P08758 N/A
    819308 8h9z:A (1.42) BS03 CA ? GO:0001786 ... P08758 N/A
    819309 8ha0:R (2.62) BS01 CLR ? GO:0004888 ... Q03431 36482086
    819310 8ha0:R (2.62) BS02 CLR ? GO:0004888 ... Q03431 36482086
    819311 8ha0:R (2.62) BS03 CLR ? GO:0004888 ... Q03431 36482086
    819312 8ha0:R (2.62) BS04 CLR ? GO:0004888 ... Q03431 36482086
    819313 8hac:A (2.32) BS01 ADP 3.6.-.- GO:0005524 ... B7G933 38867239
    819314 8hac:A (2.32) BS02 MG 3.6.-.- GO:0005524 ... B7G933 38867239
    819315 8hac:B (2.32) BS01 ADP 3.6.-.- GO:0005524 ... B7G933 38867239
    819316 8hac:B (2.32) BS02 MG 3.6.-.- GO:0005524 ... B7G933 38867239
    819317 8haf:R (3.25) BS01 CLR ? GO:0004888 ... Q03431 36482086
    819318 8haf:R (3.25) BS02 CLR ? GO:0004888 ... Q03431 36482086
    819319 8haf:R (3.25) BS03 CLR ? GO:0004888 ... Q03431 36482086
    819320 8hag:A (3.2) BS01 dna ? GO:0000786 ... P68431 37460559
    819321 8hag:A (3.2) BS02 dna ? GO:0000786 ... P68431 37460559
    819322 8hag:B (3.2) BS01 dna ? GO:0000781 ... P62805 37460559
    819323 8hag:B (3.2) BS02 dna ? GO:0000781 ... P62805 37460559
    819324 8hag:C (3.2) BS01 dna ? GO:0000786 ... P04908 37460559
    819325 8hag:C (3.2) BS02 dna ? GO:0000786 ... P04908 37460559
    819326 8hag:D (3.2) BS01 dna ? GO:0000786 ... P06899 37460559
    819327 8hag:D (3.2) BS02 dna ? GO:0000786 ... P06899 37460559
    819328 8hag:E (3.2) BS01 dna ? GO:0000786 ... P68431 37460559
    819329 8hag:E (3.2) BS02 dna ? GO:0000786 ... P68431 37460559
    819330 8hag:F (3.2) BS01 dna ? GO:0000781 ... P62805 37460559
    819331 8hag:F (3.2) BS02 dna ? GO:0000781 ... P62805 37460559
    819332 8hag:G (3.2) BS01 dna ? GO:0000786 ... P04908 37460559
    819333 8hag:G (3.2) BS02 dna ? GO:0000786 ... P04908 37460559
    819334 8hag:H (3.2) BS01 dna ? GO:0000786 ... P06899 37460559
    819335 8hag:H (3.2) BS02 dna ? GO:0000786 ... P06899 37460559
    819336 8hag:K (3.2) BS01 dna 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 37460559
    819337 8hah:A (3.9) BS01 dna ? GO:0000786 ... P68431 37460559
    819338 8hah:A (3.9) BS02 dna ? GO:0000786 ... P68431 37460559
    819339 8hah:C (3.9) BS01 dna ? GO:0000786 ... P04908 37460559
    819340 8hah:C (3.9) BS02 dna ? GO:0000786 ... P04908 37460559
    819341 8hah:E (3.9) BS01 dna ? GO:0000786 ... P68431 37460559
    819342 8hah:G (3.9) BS01 dna ? GO:0000786 ... P04908 37460559
    819343 8hah:H (3.9) BS01 dna ? GO:0000786 ... P06899 37460559
    819344 8hah:K (3.9) BS01 dna 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 37460559
    819345 8hah:K (3.9) BS02 dna 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 37460559
    819346 8hai:A (4.7) BS01 dna ? GO:0000786 ... P68431 37460559
    819347 8hai:A (4.7) BS02 dna ? GO:0000786 ... P68431 37460559
    819348 8hai:B (4.7) BS01 dna ? GO:0000781 ... P62805 37460559
    819349 8hai:B (4.7) BS02 dna ? GO:0000781 ... P62805 37460559
    819350 8hai:C (4.7) BS01 dna ? GO:0000786 ... P04908 37460559
    819351 8hai:C (4.7) BS02 dna ? GO:0000786 ... P04908 37460559
    819352 8hai:D (4.7) BS01 dna ? GO:0000786 ... P06899 37460559
    819353 8hai:D (4.7) BS02 dna ? GO:0000786 ... P06899 37460559
    819354 8hai:E (4.7) BS01 dna ? GO:0000786 ... P68431 37460559
    819355 8hai:E (4.7) BS02 dna ? GO:0000786 ... P68431 37460559
    819356 8hai:F (4.7) BS01 dna ? GO:0000781 ... P62805 37460559
    819357 8hai:F (4.7) BS02 dna ? GO:0000781 ... P62805 37460559
    819358 8hai:G (4.7) BS01 dna ? GO:0000786 ... P04908 37460559
    819359 8hai:G (4.7) BS02 dna ? GO:0000786 ... P04908 37460559
    819360 8hai:H (4.7) BS01 dna ? GO:0000786 ... P06899 37460559
    819361 8hai:H (4.7) BS02 dna ? GO:0000786 ... P06899 37460559
    819362 8hai:K (4.7) BS01 dna 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 37460559
    819363 8hai:K (4.7) BS02 dna 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 37460559
    819364 8haj:A (4.8) BS01 dna ? GO:0000786 ... P68431 37460559
    819365 8haj:A (4.8) BS02 dna ? GO:0000786 ... P68431 37460559
    819366 8haj:B (4.8) BS01 dna ? GO:0000781 ... P62805 37460559
    819367 8haj:B (4.8) BS02 dna ? GO:0000781 ... P62805 37460559
    819368 8haj:C (4.8) BS01 dna ? GO:0000786 ... P04908 37460559
    819369 8haj:C (4.8) BS02 dna ? GO:0000786 ... P04908 37460559
    819370 8haj:D (4.8) BS01 dna ? GO:0000786 ... P06899 37460559
    819371 8haj:D (4.8) BS02 dna ? GO:0000786 ... P06899 37460559
    819372 8haj:E (4.8) BS01 dna ? GO:0000786 ... P68431 37460559
    819373 8haj:E (4.8) BS02 dna ? GO:0000786 ... P68431 37460559
    819374 8haj:F (4.8) BS01 dna ? GO:0000781 ... P62805 37460559
    819375 8haj:F (4.8) BS02 dna ? GO:0000781 ... P62805 37460559
    819376 8haj:G (4.8) BS01 dna ? GO:0000786 ... P04908 37460559
    819377 8haj:G (4.8) BS02 dna ? GO:0000786 ... P04908 37460559
    819378 8haj:H (4.8) BS01 dna ? GO:0000786 ... P06899 37460559
    819379 8haj:H (4.8) BS02 dna ? GO:0000786 ... P06899 37460559
    819380 8haj:K (4.8) BS01 dna 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 37460559
    819381 8haj:K (4.8) BS02 dna 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 37460559
    819382 8hak:A (4.5) BS01 dna ? GO:0000786 ... P68431 37460559
    819383 8hak:A (4.5) BS02 dna ? GO:0000786 ... P68431 37460559
    819384 8hak:B (4.5) BS01 dna ? GO:0000781 ... P62805 37460559
    819385 8hak:B (4.5) BS02 dna ? GO:0000781 ... P62805 37460559
    819386 8hak:C (4.5) BS01 dna ? GO:0000786 ... P04908 37460559
    819387 8hak:C (4.5) BS02 dna ? GO:0000786 ... P04908 37460559
    819388 8hak:D (4.5) BS01 dna ? GO:0000786 ... P06899 37460559
    819389 8hak:D (4.5) BS02 dna ? GO:0000786 ... P06899 37460559
    819390 8hak:E (4.5) BS01 dna ? GO:0000786 ... P68431 37460559
    819391 8hak:E (4.5) BS02 dna ? GO:0000786 ... P68431 37460559
    819392 8hak:F (4.5) BS01 dna ? GO:0000781 ... P62805 37460559
    819393 8hak:F (4.5) BS02 dna ? GO:0000781 ... P62805 37460559
    819394 8hak:G (4.5) BS01 dna ? GO:0000786 ... P04908 37460559
    819395 8hak:G (4.5) BS02 dna ? GO:0000786 ... P04908 37460559
    819396 8hak:H (4.5) BS01 dna ? GO:0000786 ... P06899 37460559
    819397 8hak:H (4.5) BS02 dna ? GO:0000786 ... P06899 37460559
    819398 8hak:N (4.5) BS01 dna 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 37460559
    819399 8hal:A (4.4) BS01 dna ? GO:0000786 ... P68431 37460559
    819400 8hal:A (4.4) BS02 dna ? GO:0000786 ... P68431 37460559

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).