SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    819201 8gks:A (2.99) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819202 8gks:A (2.99) BS05 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819203 8gks:B (2.99) BS01 Y6U 2.1.2.1 GO:0002082 ... P34897 38324671
    819204 8gks:B (2.99) BS02 Y6U 2.1.2.1 GO:0002082 ... P34897 38324671
    819205 8gks:B (2.99) BS03 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819206 8gks:B (2.99) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819207 8gkt:A (2.64) BS01 PLG 2.1.2.1 GO:0002082 ... P34897 38324671
    819208 8gkt:A (2.64) BS02 Y7L 2.1.2.1 GO:0002082 ... P34897 38324671
    819209 8gkt:A (2.64) BS03 PLG 2.1.2.1 GO:0002082 ... P34897 38324671
    819210 8gkt:A (2.64) BS04 Y7L 2.1.2.1 GO:0002082 ... P34897 38324671
    819211 8gkt:B (2.64) BS01 PLG 2.1.2.1 GO:0002082 ... P34897 38324671
    819212 8gkt:B (2.64) BS02 Y7L 2.1.2.1 GO:0002082 ... P34897 38324671
    819213 8gkt:B (2.64) BS03 PLG 2.1.2.1 GO:0002082 ... P34897 38324671
    819214 8gkt:B (2.64) BS04 Y7L 2.1.2.1 GO:0002082 ... P34897 38324671
    819215 8gku:A (3.06) BS01 ZV1 2.1.2.1 GO:0002082 ... P34897 38324671
    819216 8gku:A (3.06) BS02 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819217 8gku:A (3.06) BS03 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819218 8gku:A (3.06) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819219 8gku:B (3.06) BS01 ZV1 2.1.2.1 GO:0002082 ... P34897 38324671
    819220 8gku:B (3.06) BS02 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819221 8gku:B (3.06) BS03 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819222 8gkw:A (2.38) BS01 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819223 8gkw:A (2.38) BS02 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819224 8gkw:A (2.38) BS03 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    819225 8gkw:A (2.38) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819226 8gkw:B (2.38) BS01 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819227 8gkw:B (2.38) BS02 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    819228 8gkw:B (2.38) BS03 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819229 8gkw:B (2.38) BS04 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819230 8gky:A (2.77) BS01 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    819231 8gky:A (2.77) BS02 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819232 8gky:A (2.77) BS03 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819233 8gky:A (2.77) BS04 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    819234 8gky:A (2.77) BS05 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819235 8gky:A (2.77) BS06 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819236 8gky:B (2.77) BS01 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    819237 8gky:B (2.77) BS02 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819238 8gky:B (2.77) BS03 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819239 8gky:B (2.77) BS04 ZVR 2.1.2.1 GO:0002082 ... P34897 38324671
    819240 8gky:B (2.77) BS05 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819241 8gky:B (2.77) BS06 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819242 8gkz:A (2.75) BS01 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819243 8gkz:A (2.75) BS02 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819244 8gkz:A (2.75) BS03 Y72 2.1.2.1 GO:0002082 ... P34897 38324671
    819245 8gkz:A (2.75) BS04 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819246 8gkz:A (2.75) BS05 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819247 8gkz:B (2.75) BS01 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819248 8gkz:B (2.75) BS02 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819249 8gkz:B (2.75) BS03 Y72 2.1.2.1 GO:0002082 ... P34897 38324671
    819250 8gkz:B (2.75) BS04 GLY 2.1.2.1 GO:0002082 ... P34897 38324671
    819251 8gkz:B (2.75) BS05 PLP 2.1.2.1 GO:0002082 ... P34897 38324671
    819252 8gl6:A (3.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    819253 8gl6:F (3.2) BS01 LMN ? N/A A5FJM7 N/A
    819254 8gl7:A (2.4) BS01 peptide N/A N/A N/A N/A
    819255 8gl7:A (2.4) BS02 STR N/A N/A N/A N/A
    819256 8gl8:A (2.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    819257 8gl8:F (2.2) BS01 LMN ? N/A A5FJM7 N/A
    819258 8gl8:I (2.2) BS01 MAN ? N/A A1E5T9 N/A
    819259 8gl8:I (2.2) BS02 MAN ? N/A A1E5T9 N/A
    819260 8gl8:I (2.2) BS03 MAN ? N/A A1E5T9 N/A
    819261 8gl8:I (2.2) BS04 MAN ? N/A A1E5T9 N/A
    819262 8gl9:A (2.81) BS01 ZQW ? GO:0000307 ... P12004 37531956
    819263 8gl9:A (2.81) BS02 ZQW ? GO:0000307 ... P12004 37531956
    819264 8gl9:A (2.81) BS03 ZQW ? GO:0000307 ... P12004 37531956
    819265 8gl9:B (2.81) BS01 ZQW ? GO:0000307 ... P12004 37531956
    819266 8gl9:B (2.81) BS02 ZQW ? GO:0000307 ... P12004 37531956
    819267 8gl9:B (2.81) BS03 ZQW ? GO:0000307 ... P12004 37531956
    819268 8gla:A (3.77) BS01 ZQZ ? GO:0000307 ... P12004 37531956
    819269 8gla:A (3.77) BS02 ZQZ ? GO:0000307 ... P12004 37531956
    819270 8gla:A (3.77) BS03 ZQZ ? GO:0000307 ... P12004 37531956
    819271 8gla:B (3.77) BS01 ZQZ ? GO:0000307 ... P12004 37531956
    819272 8gla:B (3.77) BS02 ZQZ ? GO:0000307 ... P12004 37531956
    819273 8gla:B (3.77) BS03 ZQZ ? GO:0000307 ... P12004 37531956
    819274 8glb:A (2.1) BS01 PYR 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    819275 8glb:B (2.1) BS01 PYR 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    819276 8glb:C (2.1) BS01 PYR 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    819277 8glb:D (2.1) BS01 PYR 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    819278 8gle:A (1.85) BS01 SGF ? N/A P29016 37725977
    819279 8gle:A (1.85) BS02 CUY ? N/A P29016 37725977
    819280 8glf:A (2.0) BS01 3LY ? N/A P29016 37725977
    819281 8glg:A (1.6) BS01 L9Q ? N/A P29016 37725977
    819282 8glg:A (1.6) BS02 CUY ? N/A P29016 37725977
    819283 8glh:A (1.83) BS01 3IV ? N/A P29016 37725977
    819284 8glh:A (1.83) BS02 3IY ? N/A P29016 37725977
    819285 8gli:A (2.1) BS01 ZR2 ? N/A P29016 37725977
    819286 8glj:A (3.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    819287 8glj:F (3.2) BS01 LMN ? N/A A5FJM7 N/A
    819288 8glk:A (2.8) BS01 LMN ? N/A A0A1M5G5I4 N/A
    819289 8glk:F (2.8) BS01 LMN ? N/A A5FJM7 N/A
    819290 8glm:A (2.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    819291 8glm:F (2.2) BS01 LMN ? N/A A5FJM7 N/A
    819292 8gln:A (2.2) BS01 LMN ? N/A A0A1M5G5I4 N/A
    819293 8gln:F (2.2) BS01 LMN ? N/A A5FJM7 N/A
    819294 8glo:A (1.937) BS01 HEB ? N/A A0A369Z2V2 38814789
    819295 8glp:LA (1.67) BS01 rna N/A GO:0003723 ... N/A 37020024
    819296 8glp:LA (1.67) BS02 rna N/A GO:0003723 ... N/A 37020024
    819297 8glp:LB (1.67) BS01 rna ? GO:0002181 ... P39023 37020024
    819298 8glp:LC (1.67) BS01 rna ? GO:0002181 ... P36578 37020024
    819299 8glp:LC (1.67) BS02 rna ? GO:0002181 ... P36578 37020024
    819300 8glp:LC (1.67) BS03 MG ? GO:0002181 ... P36578 37020024
    819301 8glp:LD (1.67) BS01 rna ? GO:0000027 ... P46777 37020024
    819302 8glp:LD (1.67) BS02 rna ? GO:0000027 ... P46777 37020024
    819303 8glp:LD (1.67) BS03 MG ? GO:0000027 ... P46777 37020024
    819304 8glp:LD (1.67) BS04 MG ? GO:0000027 ... P46777 37020024
    819305 8glp:LE (1.67) BS01 rna ? GO:0002181 ... Q02878 37020024
    819306 8glp:LF (1.67) BS01 rna ? GO:0000463 ... P18124 37020024
    819307 8glp:LF (1.67) BS02 rna ? GO:0000463 ... P18124 37020024
    819308 8glp:LG (1.67) BS01 rna ? GO:0000470 ... P62424 37020024
    819309 8glp:LG (1.67) BS02 rna ? GO:0000470 ... P62424 37020024
    819310 8glp:LH (1.67) BS01 rna ? GO:0002181 ... P32969 37020024
    819311 8glp:LH (1.67) BS02 MG ? GO:0002181 ... P32969 37020024
    819312 8glp:LI (1.67) BS01 rna ? GO:0000122 ... P27635 37020024
    819313 8glp:LI (1.67) BS02 rna ? GO:0000122 ... P27635 37020024
    819314 8glp:LJ (1.67) BS01 rna ? GO:0000027 ... P62913 37020024
    819315 8glp:LJ (1.67) BS02 rna ? GO:0000027 ... P62913 37020024
    819316 8glp:LJ (1.67) BS03 rna ? GO:0000027 ... P62913 37020024
    819317 8glp:LL (1.67) BS01 rna ? GO:0002181 ... P26373 37020024
    819318 8glp:LL (1.67) BS02 rna ? GO:0002181 ... P26373 37020024
    819319 8glp:LL (1.67) BS03 MG ? GO:0002181 ... P26373 37020024
    819320 8glp:LL (1.67) BS04 MG ? GO:0002181 ... P26373 37020024
    819321 8glp:LM (1.67) BS01 rna ? GO:0002181 ... P50914 37020024
    819322 8glp:LN (1.67) BS01 rna ? GO:0002181 ... P61313 37020024
    819323 8glp:LN (1.67) BS02 rna ? GO:0002181 ... P61313 37020024
    819324 8glp:LO (1.67) BS01 rna ? GO:0002181 ... P40429 37020024
    819325 8glp:LO (1.67) BS02 MG ? GO:0002181 ... P40429 37020024
    819326 8glp:LO (1.67) BS03 MG ? GO:0002181 ... P40429 37020024
    819327 8glp:LP (1.67) BS01 rna ? GO:0002181 ... P18621 37020024
    819328 8glp:LP (1.67) BS02 rna ? GO:0002181 ... P18621 37020024
    819329 8glp:LP (1.67) BS03 MG ? GO:0002181 ... P18621 37020024
    819330 8glp:LP (1.67) BS04 MG ? GO:0002181 ... P18621 37020024
    819331 8glp:LQ (1.67) BS01 rna ? GO:0002181 ... Q07020 37020024
    819332 8glp:LQ (1.67) BS02 MG ? GO:0002181 ... Q07020 37020024
    819333 8glp:LR (1.67) BS01 rna ? GO:0002181 ... P84098 37020024
    819334 8glp:LR (1.67) BS02 rna ? GO:0002181 ... P84098 37020024
    819335 8glp:LS (1.67) BS01 rna ? GO:0002181 ... Q02543 37020024
    819336 8glp:LS (1.67) BS02 rna ? GO:0002181 ... Q02543 37020024
    819337 8glp:LS (1.67) BS03 MG ? GO:0002181 ... Q02543 37020024
    819338 8glp:LT (1.67) BS01 rna ? GO:0001650 ... P46778 37020024
    819339 8glp:LT (1.67) BS02 rna ? GO:0001650 ... P46778 37020024
    819340 8glp:LU (1.67) BS01 rna ? GO:0002181 ... P35268 37020024
    819341 8glp:LV (1.67) BS01 rna ? GO:0000122 ... P62829 37020024
    819342 8glp:LW (1.67) BS01 rna ? GO:0002181 ... P83731 37020024
    819343 8glp:LW (1.67) BS02 rna ? GO:0002181 ... P83731 37020024
    819344 8glp:LX (1.67) BS01 rna ? GO:0002181 ... P62750 37020024
    819345 8glp:LX (1.67) BS02 rna ? GO:0002181 ... P62750 37020024
    819346 8glp:LY (1.67) BS01 rna ? GO:0002181 ... P61254 37020024
    819347 8glp:LY (1.67) BS02 rna ? GO:0002181 ... P61254 37020024
    819348 8glp:LY (1.67) BS03 MG ? GO:0002181 ... P61254 37020024
    819349 8glp:LZ (1.67) BS01 rna ? GO:0002181 ... P61353 37020024
    819350 8glp:La (1.67) BS01 rna ? GO:0002181 ... P46776 37020024
    819351 8glp:Lb (1.67) BS01 rna ? GO:0002181 ... P47914 37020024
    819352 8glp:Lc (1.67) BS01 rna ? GO:0002181 ... P62888 37020024
    819353 8glp:Ld (1.67) BS01 rna ? GO:0002181 ... P62899 37020024
    819354 8glp:Ld (1.67) BS02 MG ? GO:0002181 ... P62899 37020024
    819355 8glp:Le (1.67) BS01 rna ? GO:0002181 ... P62910 37020024
    819356 8glp:Lf (1.67) BS01 rna ? GO:0002181 ... P18077 37020024
    819357 8glp:Lg (1.67) BS01 rna ? GO:0002181 ... P49207 37020024
    819358 8glp:Lg (1.67) BS02 ZN ? GO:0002181 ... P49207 37020024
    819359 8glp:Lh (1.67) BS01 rna ? GO:0000463 ... P42766 37020024
    819360 8glp:Lh (1.67) BS02 rna ? GO:0000463 ... P42766 37020024
    819361 8glp:Li (1.67) BS01 rna ? GO:0002181 ... Q9Y3U8 37020024
    819362 8glp:Lj (1.67) BS01 rna ? GO:0000448 ... P61927 37020024
    819363 8glp:Lj (1.67) BS02 rna ? GO:0000448 ... P61927 37020024
    819364 8glp:Lj (1.67) BS03 ZN ? GO:0000448 ... P61927 37020024
    819365 8glp:Lk (1.67) BS01 rna ? GO:0002181 ... P63173 37020024
    819366 8glp:Ll (1.67) BS01 rna ? GO:0002181 ... P62891 37020024
    819367 8glp:Ll (1.67) BS02 rna ? GO:0002181 ... P62891 37020024
    819368 8glp:Lm (1.67) BS01 rna N/A GO:0003735 ... N/A 37020024
    819369 8glp:Lm (1.67) BS02 ZN N/A GO:0003735 ... N/A 37020024
    819370 8glp:Lo (1.67) BS01 rna ? GO:0003735 ... J3KQN4 37020024
    819371 8glp:Lo (1.67) BS02 rna ? GO:0003735 ... J3KQN4 37020024
    819372 8glp:Lo (1.67) BS03 3H3 ? GO:0003735 ... J3KQN4 37020024
    819373 8glp:Lo (1.67) BS04 ZN ? GO:0003735 ... J3KQN4 37020024
    819374 8glp:Lo (1.67) BS05 MG ? GO:0003735 ... J3KQN4 37020024
    819375 8glp:Lp (1.67) BS01 rna ? GO:0002181 ... P61513 37020024
    819376 8glp:Lp (1.67) BS02 ZN ? GO:0002181 ... P61513 37020024
    819377 8glp:Lp (1.67) BS03 MG ? GO:0002181 ... P61513 37020024
    819378 8glp:Lr (1.67) BS01 rna ? GO:0002181 ... P46779 37020024
    819379 8glp:Lr (1.67) BS02 MG ? GO:0002181 ... P46779 37020024
    819380 8glp:SA (1.67) BS01 rna ? GO:0000028 ... P08865 37020024
    819381 8glp:SB (1.67) BS01 rna ? GO:0002181 ... P61247 37020024
    819382 8glp:SC (1.67) BS01 rna ? GO:0002181 ... P15880 37020024
    819383 8glp:SD (1.67) BS01 rna 4.2.99.18 GO:0001228 ... P23396 37020024
    819384 8glp:SE (1.67) BS01 rna ? GO:0002181 ... P62701 37020024
    819385 8glp:SF (1.67) BS01 rna ? GO:0002181 ... P46782 37020024
    819386 8glp:SF (1.67) BS02 rna ? GO:0002181 ... P46782 37020024
    819387 8glp:SF (1.67) BS03 MG ? GO:0002181 ... P46782 37020024
    819388 8glp:SG (1.67) BS01 rna ? GO:0002181 ... P62753 37020024
    819389 8glp:SH (1.67) BS01 rna ? GO:0002181 ... P62081 37020024
    819390 8glp:SI (1.67) BS01 rna ? GO:0002181 ... P62241 37020024
    819391 8glp:SI (1.67) BS02 rna ? GO:0002181 ... P62241 37020024
    819392 8glp:SJ (1.67) BS01 rna ? GO:0002181 ... P46781 37020024
    819393 8glp:SK (1.67) BS01 rna ? GO:0002181 ... P46783 37020024
    819394 8glp:SL (1.67) BS01 rna ? GO:0002181 ... P62280 37020024
    819395 8glp:SM (1.67) BS01 rna ? GO:0002181 ... P25398 37020024
    819396 8glp:SN (1.67) BS01 rna ? GO:0000462 ... P62277 37020024
    819397 8glp:SN (1.67) BS02 rna ? GO:0000462 ... P62277 37020024
    819398 8glp:SO (1.67) BS01 rna ? GO:0000028 ... P62263 37020024
    819399 8glp:SP (1.67) BS01 rna ? GO:0000056 ... P62841 37020024
    819400 8glp:SP (1.67) BS02 rna ? GO:0000056 ... P62841 37020024

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).