SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    819801 8hfp:B (1.82) BS02 ZN ? N/A Q8N8R7 38159574
    819802 8hfp:C (1.82) BS01 ZN 2.1.1.366 GO:0003677 ... Q96T68 38159574
    819803 8hfp:D (1.82) BS01 ZN 2.1.1.366 GO:0003677 ... Q96T68 38159574
    819804 8hfr:As (2.64) BS01 rna ? GO:0000055 ... P0CX43 37258668
    819805 8hfr:B4 (2.64) BS01 rna ? GO:0002181 ... P0CX45 37258668
    819806 8hfr:B4 (2.64) BS02 MG ? GO:0002181 ... P0CX45 37258668
    819807 8hfr:CD (2.64) BS01 rna ? GO:0000027 ... P14126 37258668
    819808 8hfr:CW (2.64) BS01 rna ? GO:0000049 ... Q99257 37258668
    819809 8hfr:DO (2.64) BS01 rna ? GO:0002181 ... P10664 37258668
    819810 8hfr:DO (2.64) BS02 rna ? GO:0002181 ... P10664 37258668
    819811 8hfr:EX (2.64) BS01 rna ? GO:0000049 ... Q99257 37258668
    819812 8hfr:EX (2.64) BS02 rna ? GO:0000049 ... Q99257 37258668
    819813 8hfr:Ez (2.64) BS01 rna ? GO:0000027 ... P26321 37258668
    819814 8hfr:Ez (2.64) BS02 rna ? GO:0000027 ... P26321 37258668
    819815 8hfr:F8 (2.64) BS01 rna ? GO:0000027 ... Q02326 37258668
    819816 8hfr:Gu (2.64) BS01 rna ? GO:0000463 ... P05737 37258668
    819817 8hfr:Gu (2.64) BS02 rna ? GO:0000463 ... P05737 37258668
    819818 8hfr:Hj (2.64) BS01 rna ? GO:0000470 ... P17076 37258668
    819819 8hfr:Hj (2.64) BS02 rna ? GO:0000470 ... P17076 37258668
    819820 8hfr:Ib (2.64) BS01 rna ? GO:0002181 ... P05738 37258668
    819821 8hfr:Jy (2.64) BS01 rna ? GO:0000027 ... P0C0W9 37258668
    819822 8hfr:Jy (2.64) BS02 rna ? GO:0000027 ... P0C0W9 37258668
    819823 8hfr:KM (2.64) BS01 rna ? GO:0000027 ... P0CX53 37258668
    819824 8hfr:LL (2.64) BS01 rna ? GO:0002181 ... Q12690 37258668
    819825 8hfr:LL (2.64) BS02 rna ? GO:0002181 ... Q12690 37258668
    819826 8hfr:MQ (2.64) BS01 rna ? GO:0000027 ... P36105 37258668
    819827 8hfr:No (2.64) BS01 rna ? GO:0002181 ... P05748 37258668
    819828 8hfr:No (2.64) BS02 rna ? GO:0002181 ... P05748 37258668
    819829 8hfr:O6 (2.64) BS01 rna ? GO:0000470 ... P26784 37258668
    819830 8hfr:Pv (2.64) BS01 rna ? GO:0000448 ... P05740 37258668
    819831 8hfr:Pv (2.64) BS02 rna ? GO:0000448 ... P05740 37258668
    819832 8hfr:Qk (2.64) BS01 rna ? GO:0002181 ... P0CX49 37258668
    819833 8hfr:RP (2.64) BS01 rna ? GO:0002181 ... P0CX82 37258668
    819834 8hfr:SZ (2.64) BS01 rna ? GO:0002181 ... P0CX23 37258668
    819835 8hfr:SZ (2.64) BS02 rna ? GO:0002181 ... P0CX23 37258668
    819836 8hfr:Tl (2.64) BS01 rna ? GO:0002181 ... Q02753 37258668
    819837 8hfr:Tl (2.64) BS02 rna ? GO:0002181 ... Q02753 37258668
    819838 8hfr:UF (2.64) BS01 rna ? GO:0002181 ... P05749 37258668
    819839 8hfr:V5 (2.64) BS01 rna ? GO:0002181 ... P0CX41 37258668
    819840 8hfr:Wg (2.64) BS01 rna ? GO:0000027 ... P33201 37258668
    819841 8hfr:Xc (2.64) BS01 rna ? GO:0000027 ... P04456 37258668
    819842 8hfr:Xc (2.64) BS02 rna ? GO:0000027 ... P04456 37258668
    819843 8hfr:YU (2.64) BS01 rna ? GO:0002181 ... P05743 37258668
    819844 8hfr:YU (2.64) BS02 rna ? GO:0002181 ... P05743 37258668
    819845 8hfr:Zq (2.64) BS01 rna ? GO:0002181 ... P0C2H6 37258668
    819846 8hfr:aw (2.64) BS01 rna ? GO:0002181 ... P02406 37258668
    819847 8hfr:b3 (2.64) BS01 rna ? GO:0002181 ... P05747 37258668
    819848 8hfr:cC (2.64) BS01 rna ? GO:0002181 ... P14120 37258668
    819849 8hfr:dG (2.64) BS01 rna ? GO:0002181 ... P0C2H8 37258668
    819850 8hfr:eH (2.64) BS01 rna ? GO:0002181 ... P38061 37258668
    819851 8hfr:f7 (2.64) BS01 rna ? GO:0000027 ... P05744 37258668
    819852 8hfr:g2 (2.64) BS01 rna ? GO:0002181 ... P87262 37258668
    819853 8hfr:h1 (2.64) BS01 rna ? GO:0000463 ... P0CX84 37258668
    819854 8hfr:h1 (2.64) BS02 rna ? GO:0000463 ... P0CX84 37258668
    819855 8hfr:ia (2.64) BS01 rna ? GO:0002181 ... P05745 37258668
    819856 8hfr:jh (2.64) BS01 rna ? GO:0000448 ... P49166 37258668
    819857 8hfr:jh (2.64) BS02 rna ? GO:0000448 ... P49166 37258668
    819858 8hfr:kr (2.64) BS01 rna ? GO:0002181 ... P49167 37258668
    819859 8hfr:li (2.64) BS01 rna ? GO:0002181 ... P04650 37258668
    819860 8hfr:li (2.64) BS02 rna ? GO:0002181 ... P04650 37258668
    819861 8hfr:mS (2.64) BS01 rna ? GO:0002181 ... P0CX27 37258668
    819862 8hfr:nY (2.64) BS01 rna ? GO:0002181 ... P0CX25 37258668
    819863 8hfr:ox (2.64) BS01 rna ? GO:0000055 ... Q08004 37258668
    819864 8hfr:pT (2.64) BS01 rna 3.-.-.- GO:0000055 ... Q03862 37258668
    819865 8hfr:qJ (2.64) BS01 rna ? GO:0003674 ... P47019 37258668
    819866 8hfr:rA (2.64) BS01 rna ? GO:0000054 ... Q02892 37258668
    819867 8hfr:sm (2.64) BS01 rna ? GO:0003674 ... Q08687 37258668
    819868 8hfr:sm (2.64) BS02 rna ? GO:0003674 ... Q08687 37258668
    819869 8hfr:tB (2.64) BS01 rna ? GO:0001671 ... Q07915 37258668
    819870 8hfr:v9 (2.64) BS01 rna ? GO:0000055 ... P53742 37258668
    819871 8hfr:vV (2.64) BS01 rna ? GO:0000055 ... P38861 37258668
    819872 8hfr:xI (2.64) BS01 rna ? GO:0000055 ... P39715 37258668
    819873 8hfr:xd (2.64) BS01 rna ? GO:0000460 ... P40078 37258668
    819874 8hfr:yE (2.64) BS01 rna ? GO:0000054 ... Q12522 37258668
    819875 8hfr:zp (2.64) BS01 rna ? GO:0003674 ... P38202 37258668
    819876 8hfs:D (2.98) BS01 MAN N/A GO:0009401 ... N/A 36840592
    819877 8hfs:F (2.98) BS01 MAN N/A GO:0009401 ... N/A 36840592
    819878 8hfs:Y (2.98) BS01 MAN N/A GO:0009401 ... N/A 36840592
    819879 8hfs:Z (2.98) BS01 MAN N/A GO:0009401 ... N/A 36840592
    819880 8hfv:A (2.1) BS01 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819881 8hfv:A (2.1) BS02 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819882 8hfv:A (2.1) BS03 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819883 8hfv:A (2.1) BS04 0IW 3.4.22.15 GO:0006508 ... P07711 37990007
    819884 8hfv:B (2.1) BS01 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819885 8hfv:B (2.1) BS02 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819886 8hfv:B (2.1) BS03 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819887 8hfv:B (2.1) BS04 0IW 3.4.22.15 GO:0006508 ... P07711 37990007
    819888 8hfv:C (2.1) BS01 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819889 8hfv:C (2.1) BS02 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819890 8hfv:C (2.1) BS03 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819891 8hfv:C (2.1) BS04 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819892 8hfv:C (2.1) BS05 0IW 3.4.22.15 GO:0006508 ... P07711 37990007
    819893 8hfv:D (2.1) BS01 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819894 8hfv:D (2.1) BS02 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819895 8hfv:D (2.1) BS03 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819896 8hfv:D (2.1) BS04 ZN 3.4.22.15 GO:0006508 ... P07711 37990007
    819897 8hfv:D (2.1) BS05 0IW 3.4.22.15 GO:0006508 ... P07711 37990007
    819898 8hfx:E (2.98) BS01 ZN 3.4.-.- GO:0006508 ... A0A6J0Z472 37676003
    819899 8hfy:A (3.21) BS01 ZN 3.4.-.- GO:0004180 ... A0A6J0Z472 37676003
    819900 8hfz:E (2.71) BS01 ZN 3.4.-.- GO:0004180 ... A0A6J0Z472 37676003
    819901 8hg0:A (3.51) BS01 ZN 3.4.-.- GO:0006508 ... A0A6J0Z472 37676003
    819902 8hg1:A (2.8) BS01 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 36520947
    819903 8hg1:A (2.8) BS02 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 36520947
    819904 8hg1:A (2.8) BS03 MG 2.7.7.7 GO:0000166 ... A0A7H0DN44 36520947
    819905 8hg1:A (2.8) BS04 TTP 2.7.7.7 GO:0000166 ... A0A7H0DN44 36520947
    819906 8hg3:S (2.94) BS01 CLA ? GO:0009507 ... Q3B9U7 36951548
    819907 8hg3:S (2.94) BS02 CLA ? GO:0009507 ... Q3B9U7 36951548
    819908 8hg3:S (2.94) BS03 CLA ? GO:0009507 ... Q3B9U7 36951548
    819909 8hg3:S (2.94) BS04 CHL ? GO:0009507 ... Q3B9U7 36951548
    819910 8hg3:S (2.94) BS05 CHL ? GO:0009507 ... Q3B9U7 36951548
    819911 8hg3:S (2.94) BS06 CHL ? GO:0009507 ... Q3B9U7 36951548
    819912 8hg3:S (2.94) BS07 CHL ? GO:0009507 ... Q3B9U7 36951548
    819913 8hg3:S (2.94) BS08 KC2 ? GO:0009507 ... Q3B9U7 36951548
    819914 8hg3:S (2.94) BS09 CLA ? GO:0009507 ... Q3B9U7 36951548
    819915 8hg3:S (2.94) BS10 CLA ? GO:0009507 ... Q3B9U7 36951548
    819916 8hg3:S (2.94) BS11 CLA ? GO:0009507 ... Q3B9U7 36951548
    819917 8hg3:S (2.94) BS12 CLA ? GO:0009507 ... Q3B9U7 36951548
    819918 8hg3:S (2.94) BS13 CLA ? GO:0009507 ... Q3B9U7 36951548
    819919 8hg3:S (2.94) BS14 CHL ? GO:0009507 ... Q3B9U7 36951548
    819920 8hg3:S (2.94) BS15 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819921 8hg3:S (2.94) BS16 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819922 8hg3:S (2.94) BS17 IWJ ? GO:0009507 ... Q3B9U7 36951548
    819923 8hg3:S (2.94) BS18 IWJ ? GO:0009507 ... Q3B9U7 36951548
    819924 8hg3:S (2.94) BS19 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819925 8hg3:S (2.94) BS20 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819926 8hg3:S (2.94) BS21 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819927 8hg3:S (2.94) BS22 CHL ? GO:0009507 ... Q3B9U7 36951548
    819928 8hg3:S (2.94) BS23 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819929 8hg3:T (2.94) BS01 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819930 8hg3:T (2.94) BS02 IWJ ? GO:0009507 ... Q3B9U7 36951548
    819931 8hg3:T (2.94) BS03 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819932 8hg3:T (2.94) BS04 CLA ? GO:0009507 ... Q3B9U7 36951548
    819933 8hg3:T (2.94) BS05 CLA ? GO:0009507 ... Q3B9U7 36951548
    819934 8hg3:T (2.94) BS06 CLA ? GO:0009507 ... Q3B9U7 36951548
    819935 8hg3:T (2.94) BS07 CHL ? GO:0009507 ... Q3B9U7 36951548
    819936 8hg3:T (2.94) BS08 CHL ? GO:0009507 ... Q3B9U7 36951548
    819937 8hg3:T (2.94) BS09 CHL ? GO:0009507 ... Q3B9U7 36951548
    819938 8hg3:T (2.94) BS10 CHL ? GO:0009507 ... Q3B9U7 36951548
    819939 8hg3:T (2.94) BS11 KC2 ? GO:0009507 ... Q3B9U7 36951548
    819940 8hg3:T (2.94) BS12 CLA ? GO:0009507 ... Q3B9U7 36951548
    819941 8hg3:T (2.94) BS13 CLA ? GO:0009507 ... Q3B9U7 36951548
    819942 8hg3:T (2.94) BS14 CLA ? GO:0009507 ... Q3B9U7 36951548
    819943 8hg3:T (2.94) BS15 CLA ? GO:0009507 ... Q3B9U7 36951548
    819944 8hg3:T (2.94) BS16 CLA ? GO:0009507 ... Q3B9U7 36951548
    819945 8hg3:T (2.94) BS17 CHL ? GO:0009507 ... Q3B9U7 36951548
    819946 8hg3:T (2.94) BS18 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819947 8hg3:T (2.94) BS19 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819948 8hg3:T (2.94) BS20 IWJ ? GO:0009507 ... Q3B9U7 36951548
    819949 8hg3:T (2.94) BS21 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819950 8hg3:T (2.94) BS22 CHL ? GO:0009507 ... Q3B9U7 36951548
    819951 8hg3:T (2.94) BS23 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819952 8hg3:U (2.94) BS01 CHL ? GO:0009507 ... Q3B9U7 36951548
    819953 8hg3:U (2.94) BS02 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819954 8hg3:U (2.94) BS03 CHL ? GO:0009507 ... Q3B9U7 36951548
    819955 8hg3:U (2.94) BS04 IWJ ? GO:0009507 ... Q3B9U7 36951548
    819956 8hg3:U (2.94) BS05 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819957 8hg3:U (2.94) BS06 CLA ? GO:0009507 ... Q3B9U7 36951548
    819958 8hg3:U (2.94) BS07 CLA ? GO:0009507 ... Q3B9U7 36951548
    819959 8hg3:U (2.94) BS08 CLA ? GO:0009507 ... Q3B9U7 36951548
    819960 8hg3:U (2.94) BS09 CHL ? GO:0009507 ... Q3B9U7 36951548
    819961 8hg3:U (2.94) BS10 CHL ? GO:0009507 ... Q3B9U7 36951548
    819962 8hg3:U (2.94) BS11 CHL ? GO:0009507 ... Q3B9U7 36951548
    819963 8hg3:U (2.94) BS12 KC2 ? GO:0009507 ... Q3B9U7 36951548
    819964 8hg3:U (2.94) BS13 CLA ? GO:0009507 ... Q3B9U7 36951548
    819965 8hg3:U (2.94) BS14 CLA ? GO:0009507 ... Q3B9U7 36951548
    819966 8hg3:U (2.94) BS15 CLA ? GO:0009507 ... Q3B9U7 36951548
    819967 8hg3:U (2.94) BS16 CLA ? GO:0009507 ... Q3B9U7 36951548
    819968 8hg3:U (2.94) BS17 CLA ? GO:0009507 ... Q3B9U7 36951548
    819969 8hg3:U (2.94) BS18 CHL ? GO:0009507 ... Q3B9U7 36951548
    819970 8hg3:U (2.94) BS19 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819971 8hg3:U (2.94) BS20 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819972 8hg3:U (2.94) BS21 IWJ ? GO:0009507 ... Q3B9U7 36951548
    819973 8hg3:U (2.94) BS22 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819974 8hg5:P (2.9) BS01 CLA ? GO:0009507 ... Q3B9U7 36951548
    819975 8hg5:P (2.9) BS02 CLA ? GO:0009507 ... Q3B9U7 36951548
    819976 8hg5:P (2.9) BS03 CHL ? GO:0009507 ... Q3B9U7 36951548
    819977 8hg5:P (2.9) BS04 CHL ? GO:0009507 ... Q3B9U7 36951548
    819978 8hg5:P (2.9) BS05 CHL ? GO:0009507 ... Q3B9U7 36951548
    819979 8hg5:P (2.9) BS06 CHL ? GO:0009507 ... Q3B9U7 36951548
    819980 8hg5:P (2.9) BS07 KC2 ? GO:0009507 ... Q3B9U7 36951548
    819981 8hg5:P (2.9) BS08 CLA ? GO:0009507 ... Q3B9U7 36951548
    819982 8hg5:P (2.9) BS09 CLA ? GO:0009507 ... Q3B9U7 36951548
    819983 8hg5:P (2.9) BS10 CLA ? GO:0009507 ... Q3B9U7 36951548
    819984 8hg5:P (2.9) BS11 CLA ? GO:0009507 ... Q3B9U7 36951548
    819985 8hg5:P (2.9) BS12 CLA ? GO:0009507 ... Q3B9U7 36951548
    819986 8hg5:P (2.9) BS13 CHL ? GO:0009507 ... Q3B9U7 36951548
    819987 8hg5:P (2.9) BS14 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819988 8hg5:P (2.9) BS15 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819989 8hg5:P (2.9) BS16 IWJ ? GO:0009507 ... Q3B9U7 36951548
    819990 8hg5:P (2.9) BS17 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819991 8hg5:P (2.9) BS18 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819992 8hg5:P (2.9) BS19 IWJ ? GO:0009507 ... Q3B9U7 36951548
    819993 8hg5:P (2.9) BS20 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819994 8hg5:P (2.9) BS21 Q6L ? GO:0009507 ... Q3B9U7 36951548
    819995 8hg5:P (2.9) BS22 CLA ? GO:0009507 ... Q3B9U7 36951548
    819996 8hg5:P (2.9) BS23 CHL ? GO:0009507 ... Q3B9U7 36951548
    819997 8hg5:Q (2.9) BS01 CHL ? GO:0009765 ... A0A090LYE8 36951548
    819998 8hg5:Q (2.9) BS02 Q6L ? GO:0009765 ... A0A090LYE8 36951548
    819999 8hg5:Q (2.9) BS03 CLA ? GO:0009765 ... A0A090LYE8 36951548
    820000 8hg5:Q (2.9) BS04 CLA ? GO:0009765 ... A0A090LYE8 36951548

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).