SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    820201 8hh6:B (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820202 8hh6:B (2.9) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820203 8hh6:C (2.9) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820204 8hh6:D (2.9) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 37429854
    820205 8hh6:D (2.9) BS02 PO4 7.1.2.2 GO:0005515 ... P07677 37429854
    820206 8hh6:E (2.9) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820207 8hh6:F (2.9) BS01 MG 7.1.2.2 GO:0005515 ... P07677 37429854
    820208 8hh6:F (2.9) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820209 8hh7:A (2.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820210 8hh7:B (2.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820211 8hh7:B (2.5) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820212 8hh7:C (2.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820213 8hh7:C (2.5) BS02 ADP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820214 8hh7:D (2.5) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 37429854
    820215 8hh7:D (2.5) BS02 PO4 7.1.2.2 GO:0005515 ... P07677 37429854
    820216 8hh7:E (2.5) BS01 PO4 7.1.2.2 GO:0005515 ... P07677 37429854
    820217 8hh7:F (2.5) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820218 8hh8:A (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820219 8hh8:B (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820220 8hh8:C (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820221 8hh8:D (2.8) BS01 ADP 7.1.2.2 GO:0005515 ... P07677 37429854
    820222 8hh8:D (2.8) BS02 PO4 7.1.2.2 GO:0005515 ... P07677 37429854
    820223 8hh8:E (2.8) BS01 PO4 7.1.2.2 GO:0005515 ... P07677 37429854
    820224 8hh8:F (2.8) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820225 8hh9:A (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820226 8hh9:B (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820227 8hh9:B (3.6) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820228 8hh9:C (3.6) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820229 8hh9:C (3.6) BS02 PO4 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820230 8hh9:D (3.6) BS01 PO4 7.1.2.2 GO:0005515 ... P07677 37429854
    820231 8hh9:D (3.6) BS02 ADP 7.1.2.2 GO:0005515 ... P07677 37429854
    820232 8hh9:F (3.6) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820233 8hh9:F (3.6) BS02 MG 7.1.2.2 GO:0005515 ... P07677 37429854
    820234 8hha:A (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820235 8hha:A (3.4) BS02 MG 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820236 8hha:B (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820237 8hha:B (3.4) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820238 8hha:C (3.4) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820239 8hha:D (3.4) BS01 PO4 7.1.2.2 GO:0005515 ... P07677 37429854
    820240 8hha:D (3.4) BS02 ADP 7.1.2.2 GO:0005515 ... P07677 37429854
    820241 8hha:F (3.4) BS01 MG 7.1.2.2 GO:0005515 ... P07677 37429854
    820242 8hha:F (3.4) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820243 8hhb:A (3.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820244 8hhb:B (3.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820245 8hhb:B (3.5) BS02 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820246 8hhb:C (3.5) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820247 8hhb:D (3.5) BS01 PO4 7.1.2.2 GO:0005515 ... P07677 37429854
    820248 8hhb:D (3.5) BS02 ADP 7.1.2.2 GO:0005515 ... P07677 37429854
    820249 8hhb:F (3.5) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820250 8hhb:F (3.5) BS02 MG 7.1.2.2 GO:0005515 ... P07677 37429854
    820251 8hhc:A (3.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820252 8hhc:B (3.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820253 8hhc:C (3.3) BS01 ATP 7.1.2.2 GO:0005524 ... A0A0M3VGF9 37429854
    820254 8hhc:D (3.3) BS01 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820255 8hhc:F (3.3) BS01 MG 7.1.2.2 GO:0005515 ... P07677 37429854
    820256 8hhc:F (3.3) BS02 ATP 7.1.2.2 GO:0005515 ... P07677 37429854
    820257 8hhl:A (2.87) BS01 rna N/A GO:0003677 ... P0DXB1 37460897
    820258 8hhl:A (2.87) BS02 dna N/A GO:0003677 ... P0DXB1 37460897
    820259 8hhl:A (2.87) BS03 dna N/A GO:0003677 ... P0DXB1 37460897
    820260 8hhl:A (2.87) BS04 MG N/A GO:0003677 ... P0DXB1 37460897
    820261 8hhl:A (2.87) BS05 ZN N/A GO:0003677 ... P0DXB1 37460897
    820262 8hhm:A (3.08) BS01 rna N/A GO:0003677 ... P0DXB1 37460897
    820263 8hhm:A (3.08) BS02 dna N/A GO:0003677 ... P0DXB1 37460897
    820264 8hhm:A (3.08) BS03 dna N/A GO:0003677 ... P0DXB1 37460897
    820265 8hhm:A (3.08) BS04 ZN N/A GO:0003677 ... P0DXB1 37460897
    820266 8hho:A (3.2) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 37682540
    820267 8hhp:A (2.45) BS01 NZA ? GO:0003677 ... P37231 36994595
    820268 8hhp:A (2.45) BS02 LRG ? GO:0003677 ... P37231 36994595
    820269 8hhp:A (2.45) BS03 LRG ? GO:0003677 ... P37231 36994595
    820270 8hhq:A (2.4) BS01 GOA ? GO:0003677 ... P37231 36994595
    820271 8hhq:B (2.4) BS01 GOA ? GO:0003677 ... P37231 36994595
    820272 8hht:A (1.95) BS01 LV0 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0DTC1 36928316
    820273 8hhu:A (2.258) BS01 LVX 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0DTC1 36928316
    820274 8hhv:A (1.6) BS01 CA N/A N/A N/A 37726269
    820275 8hhv:B (1.6) BS01 CA N/A N/A N/A 37726269
    820276 8hhv:C (1.6) BS01 CA N/A N/A N/A 37726269
    820277 8hhv:D (1.6) BS01 CA N/A N/A N/A 37726269
    820278 8hi1:A (3.09) BS01 dna N/A GO:0003676 ... N/A 37663930
    820279 8hi1:A (3.09) BS02 dna N/A GO:0003676 ... N/A 37663930
    820280 8hi1:B (3.09) BS01 dna N/A GO:0003676 ... N/A 37663930
    820281 8hi1:C (3.09) BS01 dna N/A GO:0003676 ... N/A 37663930
    820282 8hi1:C (3.09) BS02 dna N/A GO:0003676 ... N/A 37663930
    820283 8hi1:D (3.09) BS01 dna N/A GO:0003676 ... N/A 37663930
    820284 8hi5:A (2.3) BS01 FK2 ? N/A A7NN59 37278533
    820285 8hi5:A (2.3) BS02 NAP ? N/A A7NN59 37278533
    820286 8hi6:A (2.0) BS01 FK2 ? N/A A7NN59 37278533
    820287 8hi6:A (2.0) BS02 NAP ? N/A A7NN59 37278533
    820288 8hi7:B (3.25) BS01 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    820289 8hi7:B (3.25) BS02 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    820290 8hi8:B (3.49) BS01 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    820291 8hi8:B (3.49) BS02 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    820292 8hi8:B (3.49) BS03 FE ? GO:0046872 ... A0A8T8BZJ9 37652001
    820293 8hi9:A (2.28) BS01 LKR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37259339
    820294 8hi9:B (2.28) BS01 LKR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37259339
    820295 8hib:A (2.45) BS01 peptide ? GO:0003697 ... P81877 37349336
    820296 8hib:B (2.45) BS01 peptide ? GO:0003697 ... P81877 37349336
    820297 8hib:V (2.45) BS01 peptide ? N/A Q86U70 37349336
    820298 8hic:A (1.6) BS01 URE ? GO:0046872 ... Q7V3V9 37380083
    820299 8hic:A (1.6) BS02 CA ? GO:0046872 ... Q7V3V9 37380083
    820300 8hic:A (1.6) BS03 CA ? GO:0046872 ... Q7V3V9 37380083
    820301 8hid:A (2.2) BS01 LLR 1.11.1.6 GO:0000302 ... P04040 37216701
    820302 8hid:A (2.2) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 37216701
    820303 8hid:B (2.2) BS01 LLR 1.11.1.6 GO:0000302 ... P04040 37216701
    820304 8hid:B (2.2) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 37216701
    820305 8hid:C (2.2) BS01 LLR 1.11.1.6 GO:0000302 ... P04040 37216701
    820306 8hid:C (2.2) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 37216701
    820307 8hid:D (2.2) BS01 LLR 1.11.1.6 GO:0000302 ... P04040 37216701
    820308 8hid:D (2.2) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 37216701
    820309 8hig:A (2.329) BS01 dna ? GO:0000156 ... A4FQD5 N/A
    820310 8hig:A (2.329) BS02 dna ? GO:0000156 ... A4FQD5 N/A
    820311 8hig:B (2.329) BS01 dna ? GO:0000156 ... A4FQD5 N/A
    820312 8hig:B (2.329) BS02 dna ? GO:0000156 ... A4FQD5 N/A
    820313 8hih:C (3.66) BS01 dna 2.7.7.6 GO:0000428 ... P9WGY9 37216560
    820314 8hih:C (3.66) BS02 dna 2.7.7.6 GO:0000428 ... P9WGY9 37216560
    820315 8hih:D (3.66) BS01 dna 2.7.7.6 GO:0000287 ... P9WGY7 37216560
    820316 8hih:D (3.66) BS02 dna 2.7.7.6 GO:0000287 ... P9WGY7 37216560
    820317 8hih:D (3.66) BS03 ZN 2.7.7.6 GO:0000287 ... P9WGY7 37216560
    820318 8hih:F (3.66) BS01 dna ? GO:0003677 ... P9WGI1 37216560
    820319 8hih:F (3.66) BS02 dna ? GO:0003677 ... P9WGI1 37216560
    820320 8hih:G (3.66) BS01 dna 2.7.7.6 GO:0000428 ... P9WGZ1 37216560
    820321 8hih:N (3.66) BS01 dna ? GO:0000156 ... O53830 37216560
    820322 8hih:N (3.66) BS02 dna ? GO:0000156 ... O53830 37216560
    820323 8hih:O (3.66) BS01 dna ? GO:0000156 ... O53830 37216560
    820324 8hih:O (3.66) BS02 dna ? GO:0000156 ... O53830 37216560
    820325 8hih:P (3.66) BS01 dna ? GO:0000156 ... O53830 37216560
    820326 8hih:P (3.66) BS02 dna ? GO:0000156 ... O53830 37216560
    820327 8hih:Q (3.66) BS01 dna ? GO:0000156 ... O53830 37216560
    820328 8hih:Q (3.66) BS02 dna ? GO:0000156 ... O53830 37216560
    820329 8hij:A (3.54) BS01 THH ? GO:0005506 ... P0ABE7
    P41440
    36575193
    820330 8hik:A (3.72) BS01 TPP ? GO:0005506 ... P0ABE7
    P41440
    36575193
    820331 8hil:A (3.57) BS01 ZN N/A GO:0003677 ... N/A 36893216
    820332 8hil:A (3.57) BS02 MG N/A GO:0003677 ... N/A 36893216
    820333 8hil:C (3.57) BS01 ZN ? GO:0000428 ... A0A0D3D418 36893216
    820334 8hil:I (3.57) BS01 ZN ? GO:0000428 ... A0A3P6GD79 36893216
    820335 8hil:I (3.57) BS02 ZN ? GO:0000428 ... A0A3P6GD79 36893216
    820336 8hil:J (3.57) BS01 ZN ? GO:0000428 ... A0A0D3AAT3 36893216
    820337 8hil:L (3.57) BS01 ZN ? GO:0001054 ... A0A0D2ZPP3 36893216
    820338 8him:A (2.8) BS01 dna N/A GO:0003677 ... N/A 36893216
    820339 8him:A (2.8) BS02 rna N/A GO:0003677 ... N/A 36893216
    820340 8him:A (2.8) BS03 MG N/A GO:0003677 ... N/A 36893216
    820341 8him:A (2.8) BS04 ZN N/A GO:0003677 ... N/A 36893216
    820342 8him:B (2.8) BS01 dna N/A GO:0003677 ... N/A 36893216
    820343 8him:B (2.8) BS02 dna N/A GO:0003677 ... N/A 36893216
    820344 8him:B (2.8) BS03 rna N/A GO:0003677 ... N/A 36893216
    820345 8him:C (2.8) BS01 ZN ? GO:0000428 ... A0A0D3D418 36893216
    820346 8him:I (2.8) BS01 ZN ? GO:0000428 ... A0A3P6GD79 36893216
    820347 8him:J (2.8) BS01 ZN ? GO:0000428 ... A0A0D3AAT3 36893216
    820348 8him:L (2.8) BS01 ZN ? GO:0001054 ... A0A0D2ZPP3 36893216
    820349 8hin:A (3.3) BS01 peptide ? GO:0000017 ... P31639 38057552
    820350 8hin:A (3.3) BS02 LN9 ? GO:0000017 ... P31639 38057552
    820351 8hio:A (3.73) BS01 rna N/A GO:0003677 ... P0DXB1 37460897
    820352 8hio:A (3.73) BS02 ZN N/A GO:0003677 ... P0DXB1 37460897
    820353 8hio:D (3.73) BS01 rna N/A GO:0003677 ... N/A 37460897
    820354 8hip:A (2.77) BS01 6OU ? GO:0016020 ... Q9GZC8 38664565
    820355 8hip:A (2.77) BS02 6OU ? GO:0016020 ... Q9GZC8 38664565
    820356 8hip:A (2.77) BS03 ZN ? GO:0016020 ... Q9GZC8 38664565
    820357 8hip:B (2.77) BS01 6OU ? GO:0016020 ... Q9GZC8 38664565
    820358 8hip:B (2.77) BS02 6OU ? GO:0016020 ... Q9GZC8 38664565
    820359 8hip:B (2.77) BS03 ZN ? GO:0016020 ... Q9GZC8 38664565
    820360 8hiq:A (3.2) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 37682540
    820361 8hir:A (3.18) BS01 NA ? GO:0006813 ... Q5JUK3 37494189
    820362 8hir:A (3.18) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    820363 8hir:B (3.18) BS01 NA ? GO:0006813 ... Q5JUK3 37494189
    820364 8hir:B (3.18) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    820365 8hir:C (3.18) BS01 NA ? GO:0006813 ... Q5JUK3 37494189
    820366 8hir:C (3.18) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    820367 8hir:D (3.18) BS01 NA ? GO:0006813 ... Q5JUK3 37494189
    820368 8hir:D (3.18) BS02 ZN ? GO:0006813 ... Q5JUK3 37494189
    820369 8hiu:A (2.99) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    820370 8hiu:B (2.99) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    820371 8hiv:A (2.20003) BS01 AKG N/A N/A N/A N/A
    820372 8hiv:A (2.20003) BS02 FE2 N/A N/A N/A N/A
    820373 8hiz:A (3.08) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 37682540
    820374 8hj4:A (3.1) BS01 rna 3.1.-.- GO:0003676 ... C9X1G5 36744495
    820375 8hj4:C (3.1) BS01 rna ? N/A V9H5N5 36744495
    820376 8hj5:F (3.0) BS01 U2U ? GO:0004888 ... P0ABE7
    Q96LB2
    37347749
    820377 8hj7:A (1.85) BS01 BGC N/A N/A Q9XEI3 N/A
    820378 8hj7:A (1.85) BS02 BGC N/A N/A Q9XEI3 N/A
    820379 8hj8:A (1.95) BS01 G2F N/A N/A Q9XEI3 N/A
    820380 8hj8:A (1.95) BS02 SHG N/A N/A Q9XEI3 N/A
    820381 8hj9:A (3.12) BS01 NAP 1.4.1.3 GO:0004352 ... O74024 37682540
    820382 8hja:A (2.38) BS01 C2E ? GO:0000166 ... P74113 36947515
    820383 8hja:A (2.38) BS02 C2E ? GO:0000166 ... P74113 36947515
    820384 8hja:B (2.38) BS01 C2E ? GO:0000166 ... P74113 36947515
    820385 8hja:B (2.38) BS02 C2E ? GO:0000166 ... P74113 36947515
    820386 8hjb:A (2.65) BS01 COA ? GO:0000976 ... A0A0H2ZBS8 36744476
    820387 8hje:A (2.85) BS01 VIS 3.4.19.12 GO:0004843 ... Q96RU2 37075624
    820388 8hjf:A (2.0) BS01 M1K N/A GO:0008194 ... N/A 39080270
    820389 8hjf:A (2.0) BS02 UDP N/A GO:0008194 ... N/A 39080270
    820390 8hjf:B (2.0) BS01 M1K N/A GO:0008194 ... N/A 39080270
    820391 8hjf:B (2.0) BS02 UDP N/A GO:0008194 ... N/A 39080270
    820392 8hjg:A (1.7) BS01 POG N/A GO:0008194 ... N/A 39080270
    820393 8hjg:A (1.7) BS02 M1K N/A GO:0008194 ... N/A 39080270
    820394 8hjg:A (1.7) BS03 UDP N/A GO:0008194 ... N/A 39080270
    820395 8hjg:B (1.7) BS01 M1K N/A GO:0008194 ... N/A 39080270
    820396 8hjg:B (1.7) BS02 UDP N/A GO:0008194 ... N/A 39080270
    820397 8hjh:A (1.76) BS01 POG N/A GO:0008194 ... N/A 39080270
    820398 8hjh:A (1.76) BS02 M0O N/A GO:0008194 ... N/A 39080270
    820399 8hjh:A (1.76) BS03 UDP N/A GO:0008194 ... N/A 39080270
    820400 8hjh:B (1.76) BS01 POG N/A GO:0008194 ... N/A 39080270

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).