SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    820201 8glx:F (3.88) BS01 dna N/A GO:0016887 ... P05846 38834067
    820202 8glx:F (3.88) BS02 ADP N/A GO:0016887 ... P05846 38834067
    820203 8glx:G (3.88) BS01 ATP N/A GO:0016887 ... P05846 38834067
    820204 8glx:X (3.88) BS01 dna N/A N/A P13991 38834067
    820205 8glx:X (3.88) BS02 dna N/A N/A P13991 38834067
    820206 8glx:X (3.88) BS03 ZN N/A N/A P13991 38834067
    820207 8glx:Y (3.88) BS01 dna N/A N/A P13991 38834067
    820208 8glx:Y (3.88) BS02 ZN N/A N/A P13991 38834067
    820209 8gly:A (2.03) BS01 HEM ? GO:0004497 ... Q2IU02 37971151
    820210 8glz:A (2.02) BS01 HEM ? GO:0004497 ... Q2IU02 37971151
    820211 8gm1:A (1.85) BS01 HEM ? GO:0004497 ... Q2IU02 37971151
    820212 8gm1:A (1.85) BS02 ANN ? GO:0004497 ... Q2IU02 37971151
    820213 8gm2:A (2.33) BS01 ANN ? GO:0004497 ... Q2IU02 37971151
    820214 8gm2:A (2.33) BS02 HEM ? GO:0004497 ... Q2IU02 37971151
    820215 8gm3:A (1.727) BS01 HEB ? N/A A0A3A1PTD6 38814789
    820216 8gm3:B (1.727) BS01 HEB ? N/A A0A3A1PTD6 38814789
    820217 8gm4:A (2.12) BS01 ADP 2.7.11.20 GO:0004674 ... O00418 37172726
    820218 8gm4:A (2.12) BS02 EKI 2.7.11.20 GO:0004674 ... O00418 37172726
    820219 8gm4:A (2.12) BS03 ZN 2.7.11.20 GO:0004674 ... O00418 37172726
    820220 8gm4:B (2.12) BS01 ADP ? GO:0000922 ... P0DP23 37172726
    820221 8gm4:B (2.12) BS02 CA ? GO:0000922 ... P0DP23 37172726
    820222 8gm4:B (2.12) BS03 CA ? GO:0000922 ... P0DP23 37172726
    820223 8gm5:A (2.12) BS01 ADP 2.7.11.20 GO:0004674 ... O00418 37172726
    820224 8gm5:A (2.12) BS02 EKI 2.7.11.20 GO:0004674 ... O00418 37172726
    820225 8gm5:A (2.12) BS03 ZN 2.7.11.20 GO:0004674 ... O00418 37172726
    820226 8gm5:B (2.12) BS01 ADP ? GO:0000922 ... P0DP23 37172726
    820227 8gm5:B (2.12) BS02 CA ? GO:0000922 ... P0DP23 37172726
    820228 8gm5:B (2.12) BS03 CA ? GO:0000922 ... P0DP23 37172726
    820229 8gmb:A (3.4) BS01 9AJ 2.7.10.2 GO:0001780 ... P35991 38189455
    820230 8gmc:A (2.5) BS01 YFV 2.7.11.1 GO:0003824 ... Q2M2I8 37362320
    820231 8gmc:B (2.5) BS01 YFV 2.7.11.1 GO:0003824 ... Q2M2I8 37362320
    820232 8gmd:A (2.2) BS01 ZRR 2.7.11.1 GO:0003824 ... Q2M2I8 37362320
    820233 8gmd:B (2.2) BS01 ZRR 2.7.11.1 GO:0003824 ... Q2M2I8 37362320
    820234 8gme:A (4.98) BS01 dna ? GO:0003677 ... P03695 39417586
    820235 8gme:A (4.98) BS02 ZN ? GO:0003677 ... P03695 39417586
    820236 8gme:B (4.98) BS01 ZN ? GO:0003677 ... P03695 39417586
    820237 8gme:C (4.98) BS01 dna 3.6.4.12 GO:0000166 ... P32270 39417586
    820238 8gme:D (4.98) BS01 dna 3.6.4.12 GO:0000166 ... P32270 39417586
    820239 8gmi:A (2.7) BS01 9JT 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820240 8gmi:B (2.7) BS01 FLC 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820241 8gmi:B (2.7) BS02 9JT 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820242 8gmi:C (2.7) BS01 FLC 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820243 8gmi:C (2.7) BS02 9JT 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820244 8gmi:D (2.7) BS01 FLC 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820245 8gmi:D (2.7) BS02 9JT 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820246 8gmi:E (2.7) BS01 FLC 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820247 8gmi:E (2.7) BS02 9JT 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820248 8gmi:F (2.7) BS01 FLC 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820249 8gmi:F (2.7) BS02 9JT 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820250 8gmi:G (2.7) BS01 9JT 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820251 8gmi:H (2.7) BS01 9JT 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820252 8gmj:A (4.4) BS01 ATP N/A GO:0000086 ... P08183 40240353
    820253 8gmj:A (4.4) BS02 ATP N/A GO:0000086 ... P08183 40240353
    820254 8gmk:A (1.81) BS01 PYR 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820255 8gmk:B (1.81) BS01 PYR 2.3.3.16 GO:0005975 ... P9WPD3 37252106
    820256 8gml:A (2.567) BS01 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    820257 8gml:A (2.567) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    820258 8gml:A (2.567) BS03 B7P 2.7.7.7 GO:0003684 ... Q9Y253 N/A
    820259 8gmm:A (1.8) BS01 HEB ? N/A A0ACD6B9P3 38814789
    820260 8gmm:B (1.8) BS01 HEB ? N/A A0ACD6B9P3 38814789
    820261 8gmn:A (2.6) BS01 ZWK 3.4.21.42 GO:0004252 ... P09871 37120845
    820262 8gmn:B (2.6) BS01 ZWK 3.4.21.42 GO:0004252 ... P09871 37120845
    820263 8gmn:C (2.6) BS01 ZWK 3.4.21.42 GO:0004252 ... P09871 37120845
    820264 8gmn:D (2.6) BS01 ZWK 3.4.21.42 GO:0004252 ... P09871 37120845
    820265 8gms:F (3.31) BS01 dna ? GO:0003677 ... A0A485JBB4 36598938
    820266 8gms:F (3.31) BS02 MG ? GO:0003677 ... A0A485JBB4 36598938
    820267 8gms:F (3.31) BS03 AGS ? GO:0003677 ... A0A485JBB4 36598938
    820268 8gms:F (3.31) BS04 AGS ? GO:0003677 ... A0A485JBB4 36598938
    820269 8gms:G (3.31) BS01 dna ? GO:0003677 ... A0A485JBB4 36598938
    820270 8gms:G (3.31) BS02 AGS ? GO:0003677 ... A0A485JBB4 36598938
    820271 8gmt:F (3.31) BS01 dna ? GO:0000150 ... P0A7G6 36598938
    820272 8gmt:F (3.31) BS02 MG ? GO:0000150 ... P0A7G6 36598938
    820273 8gmt:F (3.31) BS03 AGS ? GO:0000150 ... P0A7G6 36598938
    820274 8gmt:F (3.31) BS04 AGS ? GO:0000150 ... P0A7G6 36598938
    820275 8gmt:G (3.31) BS01 dna ? GO:0000150 ... P0A7G6 36598938
    820276 8gmt:G (3.31) BS02 MG ? GO:0000150 ... P0A7G6 36598938
    820277 8gmt:G (3.31) BS03 AGS ? GO:0000150 ... P0A7G6 36598938
    820278 8gmu:F (2.78) BS01 dna ? GO:0000150 ... P0A7G6 36598938
    820279 8gmu:F (2.78) BS02 AGS ? GO:0000150 ... P0A7G6 36598938
    820280 8gmu:F (2.78) BS03 AGS ? GO:0000150 ... P0A7G6 36598938
    820281 8gmu:G (2.78) BS01 dna ? GO:0000150 ... P0A7G6 36598938
    820282 8gmu:G (2.78) BS02 AGS ? GO:0000150 ... P0A7G6 36598938
    820283 8gn0:A (2.15) BS01 OEX 1.10.3.9 GO:0005506 ... P51765 37209822
    820284 8gn0:A (2.15) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 37209822
    820285 8gn0:A (2.15) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820286 8gn0:A (2.15) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820287 8gn0:A (2.15) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820288 8gn0:A (2.15) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    820289 8gn0:A (2.15) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    820290 8gn0:A (2.15) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820291 8gn0:A (2.15) BS09 JOX 1.10.3.9 GO:0005506 ... P51765 37209822
    820292 8gn0:A (2.15) BS10 JOX 1.10.3.9 GO:0005506 ... P51765 37209822
    820293 8gn0:A (2.15) BS11 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    820294 8gn0:A (2.15) BS12 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820295 8gn0:B (2.15) BS01 CLA ? GO:0009521 ... D0VWR1 37209822
    820296 8gn0:B (2.15) BS02 CLA ? GO:0009521 ... D0VWR1 37209822
    820297 8gn0:B (2.15) BS03 CLA ? GO:0009521 ... D0VWR1 37209822
    820298 8gn0:B (2.15) BS04 CLA ? GO:0009521 ... D0VWR1 37209822
    820299 8gn0:B (2.15) BS05 CLA ? GO:0009521 ... D0VWR1 37209822
    820300 8gn0:B (2.15) BS06 CLA ? GO:0009521 ... D0VWR1 37209822
    820301 8gn0:B (2.15) BS07 CLA ? GO:0009521 ... D0VWR1 37209822
    820302 8gn0:B (2.15) BS08 CLA ? GO:0009521 ... D0VWR1 37209822
    820303 8gn0:B (2.15) BS09 CLA ? GO:0009521 ... D0VWR1 37209822
    820304 8gn0:B (2.15) BS10 CLA ? GO:0009521 ... D0VWR1 37209822
    820305 8gn0:B (2.15) BS11 CLA ? GO:0009521 ... D0VWR1 37209822
    820306 8gn0:B (2.15) BS12 CLA ? GO:0009521 ... D0VWR1 37209822
    820307 8gn0:B (2.15) BS13 CLA ? GO:0009521 ... D0VWR1 37209822
    820308 8gn0:B (2.15) BS14 CLA ? GO:0009521 ... D0VWR1 37209822
    820309 8gn0:B (2.15) BS15 CLA ? GO:0009521 ... D0VWR1 37209822
    820310 8gn0:B (2.15) BS16 CLA ? GO:0009521 ... D0VWR1 37209822
    820311 8gn0:C (2.15) BS01 OEX ? GO:0005737 ... D0VWR7 37209822
    820312 8gn0:C (2.15) BS02 CLA ? GO:0005737 ... D0VWR7 37209822
    820313 8gn0:C (2.15) BS03 CLA ? GO:0005737 ... D0VWR7 37209822
    820314 8gn0:C (2.15) BS04 CLA ? GO:0005737 ... D0VWR7 37209822
    820315 8gn0:C (2.15) BS05 CLA ? GO:0005737 ... D0VWR7 37209822
    820316 8gn0:C (2.15) BS06 CLA ? GO:0005737 ... D0VWR7 37209822
    820317 8gn0:C (2.15) BS07 CLA ? GO:0005737 ... D0VWR7 37209822
    820318 8gn0:C (2.15) BS08 CLA ? GO:0005737 ... D0VWR7 37209822
    820319 8gn0:C (2.15) BS09 CLA ? GO:0005737 ... D0VWR7 37209822
    820320 8gn0:C (2.15) BS10 CLA ? GO:0005737 ... D0VWR7 37209822
    820321 8gn0:C (2.15) BS11 CLA ? GO:0005737 ... D0VWR7 37209822
    820322 8gn0:C (2.15) BS12 CLA ? GO:0005737 ... D0VWR7 37209822
    820323 8gn0:C (2.15) BS13 CLA ? GO:0005737 ... D0VWR7 37209822
    820324 8gn0:C (2.15) BS14 CLA ? GO:0005737 ... D0VWR7 37209822
    820325 8gn0:D (2.15) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820326 8gn0:D (2.15) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820327 8gn0:D (2.15) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820328 8gn0:D (2.15) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820329 8gn0:D (2.15) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820330 8gn0:D (2.15) BS06 BCT 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820331 8gn0:D (2.15) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820332 8gn0:D (2.15) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820333 8gn0:D (2.15) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820334 8gn0:E (2.15) BS01 HEM ? GO:0005506 ... P12238 37209822
    820335 8gn0:F (2.15) BS01 HEM ? GO:0005506 ... P12239 37209822
    820336 8gn0:H (2.15) BS01 CLA ? GO:0009523 ... P19052 37209822
    820337 8gn0:H (2.15) BS02 CLA ? GO:0009523 ... P19052 37209822
    820338 8gn0:H (2.15) BS03 CLA ? GO:0009523 ... P19052 37209822
    820339 8gn0:H (2.15) BS04 RRX ? GO:0009523 ... P19052 37209822
    820340 8gn0:I (2.15) BS01 CLA ? GO:0005737 ... P12240 37209822
    820341 8gn0:J (2.15) BS01 MG ? GO:0009523 ... Q7DGD4 37209822
    820342 8gn0:K (2.15) BS01 CLA ? GO:0005737 ... P19054 37209822
    820343 8gn0:K (2.15) BS02 CLA ? GO:0005737 ... P19054 37209822
    820344 8gn0:O (2.15) BS01 CA ? GO:0009654 ... D0VWR2 37209822
    820345 8gn0:V (2.15) BS01 HEC ? GO:0005506 ... P0A387 37209822
    820346 8gn0:Y (2.15) BS01 CLA ? GO:0009523 ... D0VWR3 37209822
    820347 8gn0:Z (2.15) BS01 CLA ? GO:0009523 ... D0VWR5 37209822
    820348 8gn0:a (2.15) BS01 OEX 1.10.3.9 GO:0005506 ... P51765 37209822
    820349 8gn0:a (2.15) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 37209822
    820350 8gn0:a (2.15) BS03 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    820351 8gn0:a (2.15) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820352 8gn0:a (2.15) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820353 8gn0:a (2.15) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    820354 8gn0:a (2.15) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    820355 8gn0:a (2.15) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820356 8gn0:a (2.15) BS09 JOX 1.10.3.9 GO:0005506 ... P51765 37209822
    820357 8gn0:a (2.15) BS10 JOX 1.10.3.9 GO:0005506 ... P51765 37209822
    820358 8gn0:a (2.15) BS11 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820359 8gn0:b (2.15) BS01 CLA ? GO:0009521 ... D0VWR1 37209822
    820360 8gn0:b (2.15) BS02 CLA ? GO:0009521 ... D0VWR1 37209822
    820361 8gn0:b (2.15) BS03 CLA ? GO:0009521 ... D0VWR1 37209822
    820362 8gn0:b (2.15) BS04 CLA ? GO:0009521 ... D0VWR1 37209822
    820363 8gn0:b (2.15) BS05 CLA ? GO:0009521 ... D0VWR1 37209822
    820364 8gn0:b (2.15) BS06 CLA ? GO:0009521 ... D0VWR1 37209822
    820365 8gn0:b (2.15) BS07 CLA ? GO:0009521 ... D0VWR1 37209822
    820366 8gn0:b (2.15) BS08 CLA ? GO:0009521 ... D0VWR1 37209822
    820367 8gn0:b (2.15) BS09 CLA ? GO:0009521 ... D0VWR1 37209822
    820368 8gn0:b (2.15) BS10 CLA ? GO:0009521 ... D0VWR1 37209822
    820369 8gn0:b (2.15) BS11 CLA ? GO:0009521 ... D0VWR1 37209822
    820370 8gn0:b (2.15) BS12 CLA ? GO:0009521 ... D0VWR1 37209822
    820371 8gn0:b (2.15) BS13 CLA ? GO:0009521 ... D0VWR1 37209822
    820372 8gn0:b (2.15) BS14 CLA ? GO:0009521 ... D0VWR1 37209822
    820373 8gn0:b (2.15) BS15 CLA ? GO:0009521 ... D0VWR1 37209822
    820374 8gn0:b (2.15) BS16 CLA ? GO:0009521 ... D0VWR1 37209822
    820375 8gn0:c (2.15) BS01 OEX ? GO:0005737 ... D0VWR7 37209822
    820376 8gn0:c (2.15) BS02 CA ? GO:0005737 ... D0VWR7 37209822
    820377 8gn0:c (2.15) BS03 CLA ? GO:0005737 ... D0VWR7 37209822
    820378 8gn0:c (2.15) BS04 CLA ? GO:0005737 ... D0VWR7 37209822
    820379 8gn0:c (2.15) BS05 CLA ? GO:0005737 ... D0VWR7 37209822
    820380 8gn0:c (2.15) BS06 CLA ? GO:0005737 ... D0VWR7 37209822
    820381 8gn0:c (2.15) BS07 CLA ? GO:0005737 ... D0VWR7 37209822
    820382 8gn0:c (2.15) BS08 CLA ? GO:0005737 ... D0VWR7 37209822
    820383 8gn0:c (2.15) BS09 CLA ? GO:0005737 ... D0VWR7 37209822
    820384 8gn0:c (2.15) BS10 CLA ? GO:0005737 ... D0VWR7 37209822
    820385 8gn0:c (2.15) BS11 CLA ? GO:0005737 ... D0VWR7 37209822
    820386 8gn0:c (2.15) BS12 CLA ? GO:0005737 ... D0VWR7 37209822
    820387 8gn0:c (2.15) BS13 CLA ? GO:0005737 ... D0VWR7 37209822
    820388 8gn0:c (2.15) BS14 CLA ? GO:0005737 ... D0VWR7 37209822
    820389 8gn0:c (2.15) BS15 CLA ? GO:0005737 ... D0VWR7 37209822
    820390 8gn0:d (2.15) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820391 8gn0:d (2.15) BS02 BCT 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820392 8gn0:d (2.15) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820393 8gn0:d (2.15) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820394 8gn0:d (2.15) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820395 8gn0:d (2.15) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820396 8gn0:d (2.15) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820397 8gn0:d (2.15) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820398 8gn0:d (2.15) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820399 8gn0:e (2.15) BS01 HEM ? GO:0005506 ... P12238 37209822
    820400 8gn0:f (2.15) BS01 HEM ? GO:0005506 ... P12239 37209822

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).