SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    820601 8gn2:H (1.95) BS03 CLA ? GO:0009523 ... P19052 37209822
    820602 8gn2:H (1.95) BS04 RRX ? GO:0009523 ... P19052 37209822
    820603 8gn2:I (1.95) BS01 CLA ? GO:0005737 ... P12240 37209822
    820604 8gn2:J (1.95) BS01 MG ? GO:0009523 ... Q7DGD4 37209822
    820605 8gn2:K (1.95) BS01 peptide ? GO:0005737 ... P19054 37209822
    820606 8gn2:K (1.95) BS02 CLA ? GO:0005737 ... P19054 37209822
    820607 8gn2:K (1.95) BS03 CLA ? GO:0005737 ... P19054 37209822
    820608 8gn2:O (1.95) BS01 CA ? GO:0009654 ... D0VWR2 37209822
    820609 8gn2:V (1.95) BS01 HEC ? GO:0005506 ... P0A387 37209822
    820610 8gn2:Z (1.95) BS01 peptide ? GO:0009523 ... D0VWR5 37209822
    820611 8gn2:a (1.95) BS01 OEX 1.10.3.9 GO:0005506 ... P51765 37209822
    820612 8gn2:a (1.95) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 37209822
    820613 8gn2:a (1.95) BS03 BCT 1.10.3.9 GO:0005506 ... P51765 37209822
    820614 8gn2:a (1.95) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820615 8gn2:a (1.95) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820616 8gn2:a (1.95) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820617 8gn2:a (1.95) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    820618 8gn2:a (1.95) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820619 8gn2:a (1.95) BS09 K3C 1.10.3.9 GO:0005506 ... P51765 37209822
    820620 8gn2:a (1.95) BS10 CLA 1.10.3.9 GO:0005506 ... P51765 37209822
    820621 8gn2:a (1.95) BS11 PHO 1.10.3.9 GO:0005506 ... P51765 37209822
    820622 8gn2:b (1.95) BS01 CLA ? GO:0009521 ... D0VWR1 37209822
    820623 8gn2:b (1.95) BS02 CLA ? GO:0009521 ... D0VWR1 37209822
    820624 8gn2:b (1.95) BS03 CLA ? GO:0009521 ... D0VWR1 37209822
    820625 8gn2:b (1.95) BS04 CLA ? GO:0009521 ... D0VWR1 37209822
    820626 8gn2:b (1.95) BS05 CLA ? GO:0009521 ... D0VWR1 37209822
    820627 8gn2:b (1.95) BS06 CLA ? GO:0009521 ... D0VWR1 37209822
    820628 8gn2:b (1.95) BS07 CLA ? GO:0009521 ... D0VWR1 37209822
    820629 8gn2:b (1.95) BS08 CLA ? GO:0009521 ... D0VWR1 37209822
    820630 8gn2:b (1.95) BS09 CLA ? GO:0009521 ... D0VWR1 37209822
    820631 8gn2:b (1.95) BS10 CLA ? GO:0009521 ... D0VWR1 37209822
    820632 8gn2:b (1.95) BS11 CLA ? GO:0009521 ... D0VWR1 37209822
    820633 8gn2:b (1.95) BS12 CLA ? GO:0009521 ... D0VWR1 37209822
    820634 8gn2:b (1.95) BS13 CLA ? GO:0009521 ... D0VWR1 37209822
    820635 8gn2:b (1.95) BS14 CLA ? GO:0009521 ... D0VWR1 37209822
    820636 8gn2:b (1.95) BS15 CLA ? GO:0009521 ... D0VWR1 37209822
    820637 8gn2:b (1.95) BS16 CLA ? GO:0009521 ... D0VWR1 37209822
    820638 8gn2:c (1.95) BS01 OEX ? GO:0005737 ... D0VWR7 37209822
    820639 8gn2:c (1.95) BS02 CA ? GO:0005737 ... D0VWR7 37209822
    820640 8gn2:c (1.95) BS03 CLA ? GO:0005737 ... D0VWR7 37209822
    820641 8gn2:c (1.95) BS04 CLA ? GO:0005737 ... D0VWR7 37209822
    820642 8gn2:c (1.95) BS05 CLA ? GO:0005737 ... D0VWR7 37209822
    820643 8gn2:c (1.95) BS06 CLA ? GO:0005737 ... D0VWR7 37209822
    820644 8gn2:c (1.95) BS07 CLA ? GO:0005737 ... D0VWR7 37209822
    820645 8gn2:c (1.95) BS08 CLA ? GO:0005737 ... D0VWR7 37209822
    820646 8gn2:c (1.95) BS09 CLA ? GO:0005737 ... D0VWR7 37209822
    820647 8gn2:c (1.95) BS10 CLA ? GO:0005737 ... D0VWR7 37209822
    820648 8gn2:c (1.95) BS11 CLA ? GO:0005737 ... D0VWR7 37209822
    820649 8gn2:c (1.95) BS12 CLA ? GO:0005737 ... D0VWR7 37209822
    820650 8gn2:c (1.95) BS13 CLA ? GO:0005737 ... D0VWR7 37209822
    820651 8gn2:c (1.95) BS14 CLA ? GO:0005737 ... D0VWR7 37209822
    820652 8gn2:c (1.95) BS15 CLA ? GO:0005737 ... D0VWR7 37209822
    820653 8gn2:d (1.95) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820654 8gn2:d (1.95) BS02 BCT 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820655 8gn2:d (1.95) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820656 8gn2:d (1.95) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820657 8gn2:d (1.95) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820658 8gn2:d (1.95) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820659 8gn2:d (1.95) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820660 8gn2:d (1.95) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820661 8gn2:d (1.95) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 37209822
    820662 8gn2:e (1.95) BS01 HEM ? GO:0005506 ... P12238 37209822
    820663 8gn2:f (1.95) BS01 HEM ? GO:0005506 ... P12239 37209822
    820664 8gn2:h (1.95) BS01 CLA ? GO:0009523 ... P19052 37209822
    820665 8gn2:h (1.95) BS02 CLA ? GO:0009523 ... P19052 37209822
    820666 8gn2:h (1.95) BS03 CLA ? GO:0009523 ... P19052 37209822
    820667 8gn2:h (1.95) BS04 RRX ? GO:0009523 ... P19052 37209822
    820668 8gn2:i (1.95) BS01 CLA ? GO:0005737 ... P12240 37209822
    820669 8gn2:j (1.95) BS01 MG ? GO:0009523 ... Q7DGD4 37209822
    820670 8gn2:k (1.95) BS01 peptide ? GO:0005737 ... P19054 37209822
    820671 8gn2:k (1.95) BS02 CLA ? GO:0005737 ... P19054 37209822
    820672 8gn2:k (1.95) BS03 CLA ? GO:0005737 ... P19054 37209822
    820673 8gn2:o (1.95) BS01 CA ? GO:0009654 ... D0VWR2 37209822
    820674 8gn2:v (1.95) BS01 HEC ? GO:0005506 ... P0A387 37209822
    820675 8gn2:x (1.95) BS01 CLA ? GO:0009523 ... D0VWR4 37209822
    820676 8gn2:z (1.95) BS01 peptide ? GO:0009523 ... D0VWR5 37209822
    820677 8gn3:A (1.8) BS01 dna ? N/A Q96DT7 36657642
    820678 8gn3:A (1.8) BS02 dna ? N/A Q96DT7 36657642
    820679 8gn3:A (1.8) BS03 dna ? N/A Q96DT7 36657642
    820680 8gn3:A (1.8) BS04 ZN ? N/A Q96DT7 36657642
    820681 8gn3:A (1.8) BS05 ZN ? N/A Q96DT7 36657642
    820682 8gn3:B (1.8) BS01 dna ? N/A Q96DT7 36657642
    820683 8gn3:B (1.8) BS02 dna ? N/A Q96DT7 36657642
    820684 8gn3:B (1.8) BS03 ZN ? N/A Q96DT7 36657642
    820685 8gn3:B (1.8) BS04 ZN ? N/A Q96DT7 36657642
    820686 8gn4:A (1.9) BS01 dna ? N/A Q96DT7 36657642
    820687 8gn4:A (1.9) BS02 dna ? N/A Q96DT7 36657642
    820688 8gn4:A (1.9) BS03 ZN ? N/A Q96DT7 36657642
    820689 8gn4:A (1.9) BS04 ZN ? N/A Q96DT7 36657642
    820690 8gna:A (2.8) BS01 rna ? N/A A0A0B0EGF3 36484100
    820691 8gna:A (2.8) BS02 rna ? N/A A0A0B0EGF3 36484100
    820692 8gna:A (2.8) BS03 ZN ? N/A A0A0B0EGF3 36484100
    820693 8gna:A (2.8) BS04 ZN ? N/A A0A0B0EGF3 36484100
    820694 8gna:A (2.8) BS05 ZN ? N/A A0A0B0EGF3 36484100
    820695 8gna:A (2.8) BS06 ZN ? N/A A0A0B0EGF3 36484100
    820696 8gne:A (2.3) BS01 JQR ? GO:0001609 ... P0ABE7
    P29274
    36894319
    820697 8gne:A (2.3) BS02 CLR ? GO:0001609 ... P0ABE7
    P29274
    36894319
    820698 8gne:A (2.3) BS03 CLR ? GO:0001609 ... P0ABE7
    P29274
    36894319
    820699 8gne:A (2.3) BS04 CLR ? GO:0001609 ... P0ABE7
    P29274
    36894319
    820700 8gng:A (3.2) BS01 JQ9 ? GO:0001609 ... P29274 36894319
    820701 8gng:X (3.2) BS01 JQ9 ? GO:0001609 ... P29274 36894319
    820702 8gni:A (3.74) BS01 NMN 3.2.2.-
    3.2.2.6
    GO:0003690 ... Q6SZW1 36550129
    820703 8gnj:A (3.78) BS01 NMN 3.2.2.-
    3.2.2.6
    GO:0003690 ... Q6SZW1 36550129
    820704 8gnk:A (3.1) BS01 CL ? GO:0003333 ... P23978 37400654
    820705 8gnk:A (3.1) BS02 NA ? GO:0003333 ... P23978 37400654
    820706 8gnk:A (3.1) BS03 ABU ? GO:0003333 ... P23978 37400654
    820707 8gnk:A (3.1) BS04 CLR ? GO:0003333 ... P23978 37400654
    820708 8gnk:A (3.1) BS05 CLR ? GO:0003333 ... P23978 37400654
    820709 8gnk:A (3.1) BS06 CLR ? GO:0003333 ... P23978 37400654
    820710 8gnk:A (3.1) BS07 CLR ? GO:0003333 ... P23978 37400654
    820711 8gnk:A (3.1) BS08 CLR ? GO:0003333 ... P23978 37400654
    820712 8gnn:C (2.119) BS01 peptide 3.1.11.2 GO:0000077 ... O60671 36841485
    820713 8go3:A (3.09) BS01 HEM 7.1.1.3 GO:0004129 ... P0ABI8 N/A
    820714 8go3:A (3.09) BS02 HEO 7.1.1.3 GO:0004129 ... P0ABI8 N/A
    820715 8go3:A (3.09) BS03 CU 7.1.1.3 GO:0004129 ... P0ABI8 N/A
    820716 8go3:A (3.09) BS04 UQ8 7.1.1.3 GO:0004129 ... P0ABI8 N/A
    820717 8go3:B (3.09) BS01 HEO ? GO:0004129 ... P0ABJ1 N/A
    820718 8go8:A (3.41) BS01 peptide ? GO:0001664 ... P29066 37209686
    820719 8go8:B (3.41) BS01 peptide ? GO:0001664 ... P29066 37209686
    820720 8go8:L (3.41) BS01 peptide N/A N/A N/A 37209686
    820721 8go8:M (3.41) BS01 peptide N/A N/A N/A 37209686
    820722 8go9:A (3.35) BS01 peptide ? GO:0000822 ... P32120 38175886
    820723 8go9:A (3.35) BS02 peptide ? GO:0000822 ... P32120 38175886
    820724 8go9:C (3.35) BS01 peptide N/A N/A N/A 38175886
    820725 8go9:E (3.35) BS01 peptide N/A N/A N/A 38175886
    820726 8go9:F (3.35) BS01 peptide ? GO:0000822 ... P32120 38175886
    820727 8go9:F (3.35) BS02 peptide ? GO:0000822 ... P32120 38175886
    820728 8goa:A (2.9) BS01 ZN 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 37165682
    820729 8goa:B (2.9) BS01 ZN 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 37165682
    820730 8goa:C (2.9) BS01 ZN 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 37165682
    820731 8goa:D (2.9) BS01 ZN 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 37165682
    820732 8gob:A (2.6) BS01 ZN 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 37165682
    820733 8gob:A (2.6) BS02 NAD 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 37165682
    820734 8gob:B (2.6) BS01 ZN 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 37165682
    820735 8gob:B (2.6) BS02 NAD 1.1.1.6
    1.1.1.75
    GO:0005829 ... P0A9S5 37165682
    820736 8goc:A (4.18) BS01 peptide ? GO:0000822 ... P32120 37209686
    820737 8goc:B (4.18) BS01 peptide ? GO:0000822 ... P32120 37209686
    820738 8goc:C (4.18) BS01 peptide ? GO:0000822 ... P32120 37209686
    820739 8goc:E (4.18) BS01 peptide N/A N/A N/A 37209686
    820740 8goc:L (4.18) BS01 peptide N/A N/A N/A 37209686
    820741 8goc:N (4.18) BS01 peptide N/A N/A N/A 37209686
    820742 8god:A (2.88) BS01 K3X 3.5.3.15 GO:0004668 ... Q9UM07 36823444
    820743 8goe:A (3.0) BS01 THH ? GO:0005886 ... P41440 36265513
    820744 8gof:A (3.0) BS01 LYA ? GO:0005886 ... P41440 36265513
    820745 8gog:A (2.0) BS01 JSU ? GO:0009374 ... P22629 N/A
    820746 8gog:B (2.0) BS01 JSU ? GO:0009374 ... P22629 N/A
    820747 8gol:A (1.6) BS01 IJC 3.1.1.- N/A G9I933 37468532
    820748 8gol:A (1.6) BS02 IJC 3.1.1.- N/A G9I933 37468532
    820749 8gol:B (1.6) BS01 IJC 3.1.1.- N/A G9I933 37468532
    820750 8gol:B (1.6) BS02 IJC 3.1.1.- N/A G9I933 37468532
    820751 8gol:C (1.6) BS01 IJC 3.1.1.- N/A G9I933 37468532
    820752 8gol:D (1.6) BS01 IJC 3.1.1.- N/A G9I933 37468532
    820753 8gom:A (2.783) BS01 peptide ? N/A A0A140T913 36806685
    820754 8gom:D (2.783) BS01 peptide N/A N/A N/A 36806685
    820755 8gom:E (2.783) BS01 peptide N/A N/A N/A 36806685
    820756 8gon:A (2.601) BS01 peptide ? N/A A0A140T913 36806685
    820757 8gon:D (2.601) BS01 peptide N/A N/A N/A 36806685
    820758 8gon:E (2.601) BS01 peptide N/A N/A N/A 36806685
    820759 8goo:A (4.4) BS01 peptide ? GO:0000822 ... P32120 37209686
    820760 8goo:B (4.4) BS01 peptide ? GO:0000822 ... P32120 37209686
    820761 8goo:C (4.4) BS01 peptide ? GO:0000822 ... P32120 37209686
    820762 8goo:E (4.4) BS01 peptide N/A N/A N/A 37209686
    820763 8goo:L (4.4) BS01 peptide N/A N/A N/A 37209686
    820764 8goo:N (4.4) BS01 peptide N/A N/A N/A 37209686
    820765 8got:A (1.989) BS01 K8U ? GO:0004197 ... A0A1U9IRU2 37253057
    820766 8goy:A (1.784) BS01 JV6 3.1.1.- N/A G9I933 37468532
    820767 8gp3:A (4.8) BS01 peptide ? GO:0001664 ... P29066 37209686
    820768 8gp3:B (4.8) BS01 peptide ? GO:0001664 ... P29066 37209686
    820769 8gpb:A (2.2) BS01 PLP 2.4.1.1 GO:0004645 ... P00489 1900534
    820770 8gpb:A (2.2) BS02 AMP 2.4.1.1 GO:0004645 ... P00489 1900534 MOAD: Kd=250uM
    820771 8gpb:A (2.2) BS03 AMP 2.4.1.1 GO:0004645 ... P00489 1900534 MOAD: Kd=250uM
    820772 8gpc:A (1.4) BS01 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820773 8gpc:A (1.4) BS02 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820774 8gpc:A (1.4) BS03 ZZ7 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820775 8gpc:A (1.4) BS04 ZZ7 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820776 8gpc:B (1.4) BS01 ZZ7 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820777 8gpc:B (1.4) BS02 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820778 8gpc:B (1.4) BS03 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820779 8gpc:B (1.4) BS04 ZZ7 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820780 8gpd:A (1.4) BS01 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820781 8gpd:A (1.4) BS02 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820782 8gpd:A (1.4) BS03 JXF 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820783 8gpd:A (1.4) BS04 JXF 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820784 8gpd:B (1.4) BS01 JXF 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820785 8gpd:B (1.4) BS02 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820786 8gpd:B (1.4) BS03 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820787 8gpd:B (1.4) BS04 JXF 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820788 8gpe:A (1.4) BS01 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820789 8gpe:A (1.4) BS02 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820790 8gpe:A (1.4) BS03 PNK 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820791 8gpe:A (1.4) BS04 PNK 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820792 8gpe:B (1.4) BS01 PNK 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820793 8gpe:B (1.4) BS02 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820794 8gpe:B (1.4) BS03 ZN 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820795 8gpe:B (1.4) BS04 PNK 3.5.2.6 GO:0008800 ... E9NWK5 38336327
    820796 8gpi:A (3.0) BS01 BMA N/A N/A N/A 37542068
    820797 8gpi:A (3.0) BS02 MAN N/A N/A N/A 37542068
    820798 8gpi:A (3.0) BS03 MAN N/A N/A N/A 37542068
    820799 8gpi:A (3.0) BS04 MAN N/A N/A N/A 37542068
    820800 8gpi:D (3.0) BS01 BMA N/A N/A N/A 37542068

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).