SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    820801 8hkr:B (2.4) BS01 SAH ? GO:0005886 ... P9WLL9 38129415
    820802 8hks:A (2.8) BS01 DS9 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9UGN5 N/A
    820803 8hks:B (2.8) BS01 DS9 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9UGN5 N/A
    820804 8hks:C (2.8) BS01 DS9 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9UGN5 N/A
    820805 8hks:D (2.8) BS01 DS9 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9UGN5 N/A
    820806 8hku:AL1P (2.72) BS01 rna ? GO:0000049 ... P35024 37604686
    820807 8hku:AL2P (2.72) BS01 rna ? GO:0002181 ... Q4JB43 37604686
    820808 8hku:AL3P (2.72) BS01 rna ? GO:0003723 ... Q4JB40 37604686
    820809 8hku:AL4P (2.72) BS01 rna ? GO:0003735 ... Q4JB41 37604686
    820810 8hku:AL5P (2.72) BS01 rna ? GO:0000049 ... P41202 37604686
    820811 8hku:AL5P (2.72) BS02 rna ? GO:0000049 ... P41202 37604686
    820812 8hku:AL6P (2.72) BS01 rna ? GO:0002181 ... O05637 37604686
    820813 8hku:ALX0 (2.72) BS01 rna ? GO:0003735 ... P38613 37604686
    820814 8hku:ARF1 (2.72) BS01 rna ? GO:0003747 ... Q4JA21 37604686
    820815 8hku:L10E (2.72) BS01 rna ? GO:0003735 ... Q4JC84 37604686
    820816 8hku:L13P (2.72) BS01 rna ? GO:0003729 ... P39473 37604686
    820817 8hku:L141 (2.72) BS01 rna ? GO:0003723 ... Q4JAJ9 37604686
    820818 8hku:L142 (2.72) BS01 rna ? GO:0003723 ... Q4JAJ9 37604686
    820819 8hku:L14P (2.72) BS01 rna ? GO:0003735 ... Q4JB50 37604686
    820820 8hku:L15E (2.72) BS01 rna ? GO:0003735 ... Q4JB20 37604686
    820821 8hku:L15P (2.72) BS01 rna ? GO:0003735 ... O05643 37604686
    820822 8hku:L18E (2.72) BS01 rna ? GO:0003735 ... P39474 37604686
    820823 8hku:L18P (2.72) BS01 rna ? GO:0000027 ... O05640 37604686
    820824 8hku:L18P (2.72) BS02 rna ? GO:0000027 ... O05640 37604686
    820825 8hku:L19E (2.72) BS01 rna ? GO:0003723 ... O05639 37604686
    820826 8hku:L21E (2.72) BS01 rna ? GO:0003735 ... Q4JB11 37604686
    820827 8hku:L21E (2.72) BS02 rna ? GO:0003735 ... Q4JB11 37604686
    820828 8hku:L22P (2.72) BS01 rna ? GO:0002181 ... Q4JB45 37604686
    820829 8hku:L23P (2.72) BS01 rna ? GO:0003735 ... Q4JB42 37604686
    820830 8hku:L24E (2.72) BS01 rna ? GO:0003735 ... Q4JAV2 37604686
    820831 8hku:L24P (2.72) BS01 rna ? GO:0003723 ... O05633 37604686
    820832 8hku:L29P (2.72) BS01 rna ? GO:0003735 ... Q4JB47 37604686
    820833 8hku:L30E (2.72) BS01 rna ? GO:0003723 ... P11522 37604686
    820834 8hku:L30P (2.72) BS01 rna ? GO:0000463 ... O05642 37604686
    820835 8hku:L30P (2.72) BS02 rna ? GO:0000463 ... O05642 37604686
    820836 8hku:L31E (2.72) BS01 rna ? GO:0003735 ... P38618 37604686
    820837 8hku:L32E (2.72) BS01 rna ? GO:0003735 ... O05638 37604686
    820838 8hku:L34E (2.72) BS01 rna ? GO:0003735 ... O05981 37604686
    820839 8hku:L37A (2.72) BS01 rna ? GO:0003735 ... Q4JB29 37604686
    820840 8hku:L37E (2.72) BS01 rna ? GO:0003735 ... Q4JAZ9 37604686
    820841 8hku:L39E (2.72) BS01 rna ? GO:0003735 ... P13005 37604686
    820842 8hku:L40E (2.72) BS01 rna ? GO:0003735 ... Q4JAP0 37604686
    820843 8hku:L44E (2.72) BS01 rna ? GO:0003735 ... Q4J9B2 37604686
    820844 8hku:L44E (2.72) BS02 rna ? GO:0003735 ... Q4J9B2 37604686
    820845 8hku:L45A (2.72) BS01 rna ? N/A Q4J9G6 37604686
    820846 8hku:L46A (2.72) BS01 rna ? N/A Q4J953 37604686
    820847 8hku:L47A (2.72) BS01 rna ? N/A F2Z6C4 37604686
    820848 8hku:L7A1 (2.72) BS01 rna ? GO:0001682 ... Q4J8P1 37604686
    820849 8hku:L7A2 (2.72) BS01 rna ? GO:0001682 ... Q4J8P1 37604686
    820850 8hkv:AL2P (4.94) BS01 rna ? GO:0002181 ... Q4JB43 37604686
    820851 8hkv:AL3P (4.94) BS01 rna ? GO:0003723 ... Q4JB40 37604686
    820852 8hkv:AL4P (4.94) BS01 rna ? GO:0003735 ... Q4JB41 37604686
    820853 8hkv:AL5P (4.94) BS01 rna ? GO:0000049 ... P41202 37604686
    820854 8hkv:AL5P (4.94) BS02 rna ? GO:0000049 ... P41202 37604686
    820855 8hkv:AL6P (4.94) BS01 rna ? GO:0002181 ... O05637 37604686
    820856 8hkv:ALX0 (4.94) BS01 rna ? GO:0003735 ... P38613 37604686
    820857 8hkv:ALX0 (4.94) BS02 rna ? GO:0003735 ... P38613 37604686
    820858 8hkv:L10E (4.94) BS01 rna ? GO:0003735 ... Q4JC84 37604686
    820859 8hkv:L10E (4.94) BS02 rna ? GO:0003735 ... Q4JC84 37604686
    820860 8hkv:L13P (4.94) BS01 rna ? GO:0003729 ... P39473 37604686
    820861 8hkv:L141 (4.94) BS01 rna ? GO:0003723 ... Q4JAJ9 37604686
    820862 8hkv:L142 (4.94) BS01 rna ? GO:0003723 ... Q4JAJ9 37604686
    820863 8hkv:L14P (4.94) BS01 rna ? GO:0003735 ... Q4JB50 37604686
    820864 8hkv:L15E (4.94) BS01 rna ? GO:0003735 ... Q4JB20 37604686
    820865 8hkv:L15P (4.94) BS01 rna ? GO:0003735 ... O05643 37604686
    820866 8hkv:L18E (4.94) BS01 rna ? GO:0003735 ... P39474 37604686
    820867 8hkv:L18P (4.94) BS01 rna ? GO:0000027 ... O05640 37604686
    820868 8hkv:L18P (4.94) BS02 rna ? GO:0000027 ... O05640 37604686
    820869 8hkv:L19E (4.94) BS01 rna ? GO:0003723 ... O05639 37604686
    820870 8hkv:L21E (4.94) BS01 rna ? GO:0003735 ... Q4JB11 37604686
    820871 8hkv:L21E (4.94) BS02 rna ? GO:0003735 ... Q4JB11 37604686
    820872 8hkv:L22P (4.94) BS01 rna ? GO:0002181 ... Q4JB45 37604686
    820873 8hkv:L23P (4.94) BS01 rna ? GO:0003735 ... Q4JB42 37604686
    820874 8hkv:L24E (4.94) BS01 rna ? GO:0003735 ... Q4JAV2 37604686
    820875 8hkv:L24P (4.94) BS01 rna ? GO:0003723 ... O05633 37604686
    820876 8hkv:L29P (4.94) BS01 rna ? GO:0003735 ... Q4JB47 37604686
    820877 8hkv:L30E (4.94) BS01 rna ? GO:0003723 ... P11522 37604686
    820878 8hkv:L30P (4.94) BS01 rna ? GO:0000463 ... O05642 37604686
    820879 8hkv:L31E (4.94) BS01 rna ? GO:0003735 ... P38618 37604686
    820880 8hkv:L32E (4.94) BS01 rna ? GO:0003735 ... O05638 37604686
    820881 8hkv:L34E (4.94) BS01 rna ? GO:0003735 ... O05981 37604686
    820882 8hkv:L37A (4.94) BS01 rna ? GO:0003735 ... Q4JB29 37604686
    820883 8hkv:L37E (4.94) BS01 rna ? GO:0003735 ... Q4JAZ9 37604686
    820884 8hkv:L39E (4.94) BS01 rna ? GO:0003735 ... P13005 37604686
    820885 8hkv:L40E (4.94) BS01 rna ? GO:0003735 ... Q4JAP0 37604686
    820886 8hkv:L44E (4.94) BS01 rna ? GO:0003735 ... Q4J9B2 37604686
    820887 8hkv:L45A (4.94) BS01 rna ? N/A Q4J9G6 37604686
    820888 8hkv:L46A (4.94) BS01 rna ? N/A Q4J953 37604686
    820889 8hkv:L47A (4.94) BS01 rna ? N/A F2Z6C4 37604686
    820890 8hkv:L7A1 (4.94) BS01 rna ? GO:0001682 ... Q4J8P1 37604686
    820891 8hkv:L7A2 (4.94) BS01 rna ? GO:0001682 ... Q4J8P1 37604686
    820892 8hkw:A (1.9) BS01 peptide ? N/A O00629 36875212
    820893 8hkw:A (1.9) BS02 peptide ? N/A O00629 36875212
    820894 8hkw:B (1.9) BS01 peptide ? N/A O00629 36875212
    820895 8hkw:B (1.9) BS02 peptide ? N/A O00629 36875212
    820896 8hkx:AS2P (3.14) BS01 rna ? GO:0003735 ... P39478 37604686
    820897 8hkx:AS3P (3.14) BS01 rna ? GO:0003676 ... Q4JB46 37604686
    820898 8hkx:AS4E (3.14) BS01 rna ? GO:0003723 ... O05634 37604686
    820899 8hkx:AS4P (3.14) BS01 rna ? GO:0003723 ... P39467 37604686
    820900 8hkx:AS5P (3.14) BS01 rna ? GO:0003723 ... O05641 37604686
    820901 8hkx:AS6E (3.14) BS01 rna ? GO:0003735 ... Q4JAI1 37604686
    820902 8hkx:AS7P (3.14) BS01 rna ? GO:0003723 ... P17198 37604686
    820903 8hkx:AS8E (3.14) BS01 rna ? GO:0003735 ... Q4JAP5 37604686
    820904 8hkx:AS8P (3.14) BS01 rna ? GO:0003735 ... O05636 37604686
    820905 8hkx:AS9P (3.14) BS01 rna ? GO:0000462 ... P39468 37604686
    820906 8hkx:S10P (3.14) BS01 rna ? GO:0000049 ... P17199 37604686
    820907 8hkx:S11P (3.14) BS01 rna ? GO:0003735 ... P39469 37604686
    820908 8hkx:S12P (3.14) BS01 rna ? GO:0003735 ... P11524 37604686
    820909 8hkx:S13P (3.14) BS01 rna ? GO:0003676 ... P39470 37604686
    820910 8hkx:S14P (3.14) BS01 rna ? GO:0002181 ... O05635 37604686
    820911 8hkx:S15P (3.14) BS01 rna ? GO:0003735 ... Q4JAI3 37604686
    820912 8hkx:S17E (3.14) BS01 rna ? GO:0003735 ... Q4JAX5 37604686
    820913 8hkx:S17P (3.14) BS01 rna ? GO:0003735 ... Q4JB49 37604686
    820914 8hkx:S19E (3.14) BS01 rna ? GO:0000028 ... Q4J8U1 37604686
    820915 8hkx:S19P (3.14) BS01 rna ? GO:0003723 ... Q4JB44 37604686
    820916 8hkx:S24E (3.14) BS01 rna ? GO:0003735 ... Q4JAF9 37604686
    820917 8hkx:S27E (3.14) BS01 rna ? GO:0003735 ... Q4J9B1 37604686
    820918 8hkx:S28E (3.14) BS01 rna ? GO:0003735 ... Q4JAV1 37604686
    820919 8hkx:S3AE (3.14) BS01 rna ? GO:0003735 ... Q4JB17 37604686
    820920 8hkx:SL7A (3.14) BS01 rna ? GO:0001682 ... Q4J8P1 37604686
    820921 8hky:AL1P (4.45) BS01 rna ? GO:0000049 ... P35024 37604686
    820922 8hky:AL2P (4.45) BS01 rna ? GO:0002181 ... Q4JB43 37604686
    820923 8hky:AL3P (4.45) BS01 rna ? GO:0003723 ... Q4JB40 37604686
    820924 8hky:AL4P (4.45) BS01 rna ? GO:0003735 ... Q4JB41 37604686
    820925 8hky:AL5P (4.45) BS01 rna ? GO:0000049 ... P41202 37604686
    820926 8hky:AL5P (4.45) BS02 rna ? GO:0000049 ... P41202 37604686
    820927 8hky:AL6P (4.45) BS01 rna ? GO:0002181 ... O05637 37604686
    820928 8hky:ALX0 (4.45) BS01 rna ? GO:0003735 ... P38613 37604686
    820929 8hky:ALX0 (4.45) BS02 rna ? GO:0003735 ... P38613 37604686
    820930 8hky:AS2P (4.45) BS01 rna ? GO:0003735 ... P39478 37604686
    820931 8hky:AS2P (4.45) BS02 UNK ? GO:0003735 ... P39478 37604686
    820932 8hky:AS2P (4.45) BS03 UNK ? GO:0003735 ... P39478 37604686
    820933 8hky:AS3P (4.45) BS01 rna ? GO:0003676 ... Q4JB46 37604686
    820934 8hky:AS4E (4.45) BS01 rna ? GO:0003723 ... O05634 37604686
    820935 8hky:AS4P (4.45) BS01 rna ? GO:0003723 ... P39467 37604686
    820936 8hky:AS5P (4.45) BS01 rna ? GO:0003723 ... O05641 37604686
    820937 8hky:AS5P (4.45) BS02 UNK ? GO:0003723 ... O05641 37604686
    820938 8hky:AS5P (4.45) BS03 UNK ? GO:0003723 ... O05641 37604686
    820939 8hky:AS5P (4.45) BS04 UNK ? GO:0003723 ... O05641 37604686
    820940 8hky:AS6E (4.45) BS01 rna ? GO:0003735 ... Q4JAI1 37604686
    820941 8hky:AS7P (4.45) BS01 rna ? GO:0003723 ... P17198 37604686
    820942 8hky:AS7P (4.45) BS02 rna ? GO:0003723 ... P17198 37604686
    820943 8hky:AS8E (4.45) BS01 rna ? GO:0003735 ... Q4JAP5 37604686
    820944 8hky:AS8P (4.45) BS01 rna ? GO:0003735 ... O05636 37604686
    820945 8hky:AS9P (4.45) BS01 rna ? GO:0000462 ... P39468 37604686
    820946 8hky:L10E (4.45) BS01 rna ? GO:0003735 ... Q4JC84 37604686
    820947 8hky:L10E (4.45) BS02 rna ? GO:0003735 ... Q4JC84 37604686
    820948 8hky:L10E (4.45) BS03 rna ? GO:0003735 ... Q4JC84 37604686
    820949 8hky:L13P (4.45) BS01 rna ? GO:0003729 ... P39473 37604686
    820950 8hky:L141 (4.45) BS01 rna ? GO:0003723 ... Q4JAJ9 37604686
    820951 8hky:L142 (4.45) BS01 rna ? GO:0003723 ... Q4JAJ9 37604686
    820952 8hky:L14P (4.45) BS01 rna ? GO:0003735 ... Q4JB50 37604686
    820953 8hky:L15E (4.45) BS01 rna ? GO:0003735 ... Q4JB20 37604686
    820954 8hky:L15P (4.45) BS01 rna ? GO:0003735 ... O05643 37604686
    820955 8hky:L18E (4.45) BS01 rna ? GO:0003735 ... P39474 37604686
    820956 8hky:L18P (4.45) BS01 rna ? GO:0000027 ... O05640 37604686
    820957 8hky:L18P (4.45) BS02 rna ? GO:0000027 ... O05640 37604686
    820958 8hky:L19E (4.45) BS01 rna ? GO:0003723 ... O05639 37604686
    820959 8hky:L21E (4.45) BS01 rna ? GO:0003735 ... Q4JB11 37604686
    820960 8hky:L21E (4.45) BS02 rna ? GO:0003735 ... Q4JB11 37604686
    820961 8hky:L22P (4.45) BS01 rna ? GO:0002181 ... Q4JB45 37604686
    820962 8hky:L23P (4.45) BS01 rna ? GO:0003735 ... Q4JB42 37604686
    820963 8hky:L24E (4.45) BS01 rna ? GO:0003735 ... Q4JAV2 37604686
    820964 8hky:L24P (4.45) BS01 rna ? GO:0003723 ... O05633 37604686
    820965 8hky:L29P (4.45) BS01 rna ? GO:0003735 ... Q4JB47 37604686
    820966 8hky:L30E (4.45) BS01 rna ? GO:0003723 ... P11522 37604686
    820967 8hky:L30P (4.45) BS01 rna ? GO:0000463 ... O05642 37604686
    820968 8hky:L30P (4.45) BS02 rna ? GO:0000463 ... O05642 37604686
    820969 8hky:L31E (4.45) BS01 rna ? GO:0003735 ... P38618 37604686
    820970 8hky:L32E (4.45) BS01 rna ? GO:0003735 ... O05638 37604686
    820971 8hky:L34E (4.45) BS01 rna ? GO:0003735 ... O05981 37604686
    820972 8hky:L37A (4.45) BS01 rna ? GO:0003735 ... Q4JB29 37604686
    820973 8hky:L37E (4.45) BS01 rna ? GO:0003735 ... Q4JAZ9 37604686
    820974 8hky:L39E (4.45) BS01 rna ? GO:0003735 ... P13005 37604686
    820975 8hky:L40E (4.45) BS01 rna ? GO:0003735 ... Q4JAP0 37604686
    820976 8hky:L44E (4.45) BS01 rna ? GO:0003735 ... Q4J9B2 37604686
    820977 8hky:L45A (4.45) BS01 rna ? N/A Q4J9G6 37604686
    820978 8hky:L46A (4.45) BS01 rna ? N/A Q4J953 37604686
    820979 8hky:L47A (4.45) BS01 rna ? N/A F2Z6C4 37604686
    820980 8hky:L7A1 (4.45) BS01 rna ? GO:0001682 ... Q4J8P1 37604686
    820981 8hky:L7A2 (4.45) BS01 rna ? GO:0001682 ... Q4J8P1 37604686
    820982 8hky:S10P (4.45) BS01 rna ? GO:0000049 ... P17199 37604686
    820983 8hky:S11P (4.45) BS01 rna ? GO:0003735 ... P39469 37604686
    820984 8hky:S12P (4.45) BS01 rna ? GO:0003735 ... P11524 37604686
    820985 8hky:S13P (4.45) BS01 rna ? GO:0003676 ... P39470 37604686
    820986 8hky:S14P (4.45) BS01 rna ? GO:0002181 ... O05635 37604686
    820987 8hky:S15P (4.45) BS01 rna ? GO:0003735 ... Q4JAI3 37604686
    820988 8hky:S17E (4.45) BS01 rna ? GO:0003735 ... Q4JAX5 37604686
    820989 8hky:S17P (4.45) BS01 rna ? GO:0003735 ... Q4JB49 37604686
    820990 8hky:S19E (4.45) BS01 rna ? GO:0000028 ... Q4J8U1 37604686
    820991 8hky:S19P (4.45) BS01 rna ? GO:0003723 ... Q4JB44 37604686
    820992 8hky:S24E (4.45) BS01 rna ? GO:0003735 ... Q4JAF9 37604686
    820993 8hky:S27A (4.45) BS01 rna ? GO:0003735 ... Q4JAG0 37604686
    820994 8hky:S27E (4.45) BS01 rna ? GO:0003735 ... Q4J9B1 37604686
    820995 8hky:S28E (4.45) BS01 rna ? GO:0003735 ... Q4JAV1 37604686
    820996 8hky:S3AE (4.45) BS01 rna ? GO:0003735 ... Q4JB17 37604686
    820997 8hky:SL7A (4.45) BS01 rna ? GO:0001682 ... Q4J8P1 37604686
    820998 8hkz:AL1P (4.78) BS01 rna ? GO:0000049 ... P35024 37604686
    820999 8hkz:AL1P (4.78) BS02 rna ? GO:0000049 ... P35024 37604686
    821000 8hkz:AL2P (4.78) BS01 rna ? GO:0002181 ... Q4JB43 37604686

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).