SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    822001 8gzu:S7 (4.18) BS01 SF4 1.6.5.3 GO:0008137 ... Q951B4 37248254
    822002 8gzu:S8 (4.18) BS01 SF4 ? GO:0003954 ... I7MDW5 37248254
    822003 8gzu:S8 (4.18) BS02 SF4 ? GO:0003954 ... I7MDW5 37248254
    822004 8gzu:SA (4.18) BS01 FAD 1.3.5.1 GO:0000104 ... Q23DI3 37248254
    822005 8gzu:SB (4.18) BS01 FES 1.3.5.1 GO:0005743 ... I7M403 37248254
    822006 8gzu:SB (4.18) BS02 SF4 1.3.5.1 GO:0005743 ... I7M403 37248254
    822007 8gzu:SB (4.18) BS03 F3S 1.3.5.1 GO:0005743 ... I7M403 37248254
    822008 8gzu:V1 (4.18) BS01 SF4 7.1.1.2 GO:0005739 ... Q23KE4 37248254
    822009 8gzu:V1 (4.18) BS02 FMN 7.1.1.2 GO:0005739 ... Q23KE4 37248254
    822010 8gzu:V2 (4.18) BS01 FES ? GO:0003954 ... I7MEP0 37248254
    822011 8gzu:VB (4.18) BS01 ZN ? GO:0005740 ... Q23FF5 37248254
    822012 8gzu:Y5 (4.18) BS01 HEM ? N/A Q951A7 37248254
    822013 8gzu:Z1 (4.18) BS01 peptide N/A N/A N/A 37248254
    822014 8gzu:a9 (4.18) BS01 NDP ? GO:0005739 ... I7MLH2 37248254
    822015 8gzu:b4 (4.18) BS01 ADP N/A N/A N/A 37248254
    822016 8gzu:b8 (4.18) BS01 ADP ? N/A I7M855 37248254
    822017 8gzu:c1 (4.18) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    822018 8gzu:c1 (4.18) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    822019 8gzu:c2 (4.18) BS01 CU 7.1.1.9 GO:0004129 ... Q950Y9 37248254
    822020 8gzu:fs (4.18) BS01 FES ? GO:0005737 ... I7M8P0 37248254
    822021 8gzu:fs (4.18) BS02 FES ? GO:0005737 ... I7M8P0 37248254
    822022 8gzu:fx (4.18) BS01 FES ? GO:0005739 ... Q22W11 37248254
    822023 8gzu:qC (4.18) BS01 HEM 1.10.2.2 GO:0009055 ... Q950Z1 37248254
    822024 8gzu:qC (4.18) BS02 HEM 1.10.2.2 GO:0009055 ... Q950Z1 37248254
    822025 8gzu:qD (4.18) BS01 peptide ? GO:0005739 ... Q24IM5 37248254
    822026 8gzu:qD (4.18) BS02 HEC ? GO:0005739 ... Q24IM5 37248254
    822027 8gzu:qE (4.18) BS01 FES ? GO:0016020 ... I7MIC7 37248254
    822028 8gzu:qc (4.18) BS01 HEM 1.10.2.2 GO:0009055 ... Q950Z1 37248254
    822029 8gzu:qc (4.18) BS02 HEM 1.10.2.2 GO:0009055 ... Q950Z1 37248254
    822030 8gzu:qd (4.18) BS01 peptide ? GO:0005739 ... Q24IM5 37248254
    822031 8gzu:qd (4.18) BS02 HEC ? GO:0005739 ... Q24IM5 37248254
    822032 8gzu:qe (4.18) BS01 FES ? GO:0016020 ... I7MIC7 37248254
    822033 8gzu:s1 (4.18) BS01 SF4 ? GO:0008137 ... Q23KA9 37248254
    822034 8gzu:s1 (4.18) BS02 SF4 ? GO:0008137 ... Q23KA9 37248254
    822035 8gzu:s1 (4.18) BS03 FES ? GO:0008137 ... Q23KA9 37248254
    822036 8gzu:s7 (4.18) BS01 SF4 1.6.5.3 GO:0008137 ... Q951B4 37248254
    822037 8gzu:s8 (4.18) BS01 SF4 ? GO:0003954 ... I7MDW5 37248254
    822038 8gzu:s8 (4.18) BS02 SF4 ? GO:0003954 ... I7MDW5 37248254
    822039 8gzu:sa (4.18) BS01 FAD 1.3.5.1 GO:0000104 ... Q23DI3 37248254
    822040 8gzu:sb (4.18) BS01 FES 1.3.5.1 GO:0005743 ... I7M403 37248254
    822041 8gzu:sb (4.18) BS02 SF4 1.3.5.1 GO:0005743 ... I7M403 37248254
    822042 8gzu:sb (4.18) BS03 F3S 1.3.5.1 GO:0005743 ... I7M403 37248254
    822043 8gzu:v1 (4.18) BS01 SF4 7.1.1.2 GO:0005739 ... Q23KE4 37248254
    822044 8gzu:v1 (4.18) BS02 FMN 7.1.1.2 GO:0005739 ... Q23KE4 37248254
    822045 8gzu:v2 (4.18) BS01 FES ? GO:0003954 ... I7MEP0 37248254
    822046 8gzu:vb (4.18) BS01 ZN ? GO:0005740 ... Q23FF5 37248254
    822047 8gzu:vb (4.18) BS02 ZN ? GO:0005740 ... Q23FF5 37248254
    822048 8gzu:y5 (4.18) BS01 HEM ? N/A Q951A7 37248254
    822049 8gzu:z1 (4.18) BS01 peptide N/A N/A N/A 37248254
    822050 8gzv:A (2.2) BS01 GDP ? GO:0003924 ... A0A0H3GRR0 37429870
    822051 8gzw:A (2.5) BS01 GDP ? GO:0003924 ... A0A0H3GRR0 37429870
    822052 8gzw:C (2.5) BS01 GDP ? GO:0003924 ... A0A0H3GRR0 37429870
    822053 8gzw:E (2.5) BS01 GDP ? GO:0003924 ... A0A0H3GRR0 37429870
    822054 8gzx:A (1.84) BS01 GDP ? GO:0003924 ... P0A9A6 37429870
    822055 8gzy:A (2.6) BS01 GDP ? GO:0003924 ... P0A9A6 37429870
    822056 8gzy:C (2.6) BS01 GDP ? GO:0003924 ... P0A9A6 37429870
    822057 8gzy:E (2.6) BS01 GDP ? GO:0003924 ... P0A9A6 37429870
    822058 8h06:A (2.66) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37479708
    822059 8h09:A (1.81) BS01 1PS ? GO:0006629 ... A0A7Y4B3E8 37558668
    822060 8h09:A (1.81) BS02 1PS ? GO:0006629 ... A0A7Y4B3E8 37558668
    822061 8h09:B (1.81) BS01 1PS ? GO:0006629 ... A0A7Y4B3E8 37558668
    822062 8h09:B (1.81) BS02 1PS ? GO:0006629 ... A0A7Y4B3E8 37558668
    822063 8h09:B (1.81) BS03 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    822064 8h0a:B (1.94) BS01 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    822065 8h0b:B (1.931) BS01 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    822066 8h0c:A (1.98) BS01 ACD ? GO:0006629 ... A0A7Y4B3E8 37558668
    822067 8h0c:A (1.98) BS02 1PS ? GO:0006629 ... A0A7Y4B3E8 37558668
    822068 8h0c:B (1.98) BS01 1PS ? GO:0006629 ... A0A7Y4B3E8 37558668
    822069 8h0c:B (1.98) BS02 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    822070 8h0d:A (2.01) BS01 HXA ? GO:0006629 ... A0A7Y4B3E8 37558668
    822071 8h0d:B (2.01) BS01 1PS ? GO:0006629 ... A0A7Y4B3E8 37558668
    822072 8h0d:B (2.01) BS02 1PS ? GO:0006629 ... A0A7Y4B3E8 37558668
    822073 8h0d:B (2.01) BS03 MG ? GO:0006629 ... A0A7Y4B3E8 37558668
    822074 8h0i:A (2.8) BS01 rna 3.5.4.38 GO:0008270 ... Q9HC16 37419875
    822075 8h0i:A (2.8) BS02 ZN 3.5.4.38 GO:0008270 ... Q9HC16 37419875
    822076 8h0i:A (2.8) BS03 ZN 3.5.4.38 GO:0008270 ... Q9HC16 37419875
    822077 8h0i:B (2.8) BS01 rna 3.5.4.38 GO:0008270 ... Q9HC16 37419875
    822078 8h0i:B (2.8) BS02 ZN 3.5.4.38 GO:0008270 ... Q9HC16 37419875
    822079 8h0i:B (2.8) BS03 ZN 3.5.4.38 GO:0008270 ... Q9HC16 37419875
    822080 8h0i:C (2.8) BS01 rna ? GO:0019058 ... P12504 37419875
    822081 8h0i:E (2.8) BS01 rna ? GO:0019058 ... P12504 37419875
    822082 8h0i:G (2.8) BS01 rna ? GO:0019058 ... P12504 37419875
    822083 8h0i:I (2.8) BS01 rna ? GO:0019058 ... P12504 37419875
    822084 8h0j:A (2.23) BS01 CA ? GO:0001786 ... P08758 39663418
    822085 8h0j:A (2.23) BS02 CA ? GO:0001786 ... P08758 39663418
    822086 8h0j:A (2.23) BS03 CA ? GO:0001786 ... P08758 39663418
    822087 8h0j:A (2.23) BS04 CA ? GO:0001786 ... P08758 39663418
    822088 8h0l:A (1.8) BS01 dna N/A N/A A0AAJ6N6B1 37702119
    822089 8h0l:A (1.8) BS02 dna N/A N/A A0AAJ6N6B1 37702119
    822090 8h0l:A (1.8) BS03 dna N/A N/A A0AAJ6N6B1 37702119
    822091 8h0l:B (1.8) BS01 dna N/A N/A A0AAJ6N6B1 37702119
    822092 8h0l:B (1.8) BS02 dna N/A N/A A0AAJ6N6B1 37702119
    822093 8h0l:B (1.8) BS03 MG N/A N/A A0AAJ6N6B1 37702119
    822094 8h0m:A (1.702) BS01 FAD ? N/A A0A024AX32 36869636
    822095 8h0m:A (1.702) BS02 2EH ? N/A A0A024AX32 36869636
    822096 8h0o:A (2.479) BS01 PZA ? GO:0003677 ... P02768 N/A
    822097 8h0o:A (2.479) BS02 PZA ? GO:0003677 ... P02768 N/A
    822098 8h0p:R (3.15) BS01 peptide ? GO:0004930 ... P28336 N/A
    822099 8h0q:R (3.3) BS01 peptide ? GO:0004930 ... P30550 N/A
    822100 8h0q:R (3.3) BS02 CLR ? GO:0004930 ... P30550 N/A
    822101 8h0q:R (3.3) BS03 CLR ? GO:0004930 ... P30550 N/A
    822102 8h0s:A (2.9) BS01 rna 2.1.1.61 GO:0004808 ... O34614 36762482
    822103 8h0s:A (2.9) BS02 SAM 2.1.1.61 GO:0004808 ... O34614 36762482
    822104 8h0s:B (2.9) BS01 SAM 2.1.1.61 GO:0004808 ... O34614 36762482
    822105 8h0s:C (2.9) BS01 rna 2.1.1.61 GO:0004808 ... O34614 36762482
    822106 8h0s:C (2.9) BS02 SAM 2.1.1.61 GO:0004808 ... O34614 36762482
    822107 8h0s:D (2.9) BS01 SAM 2.1.1.61 GO:0004808 ... O34614 36762482
    822108 8h0t:A (1.17) BS01 SAH 2.1.1.61 GO:0004808 ... O34614 36762482
    822109 8h0v:A (3.8) BS01 rna 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822110 8h0v:A (3.8) BS02 dna 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822111 8h0v:A (3.8) BS03 dna 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822112 8h0v:A (3.8) BS04 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822113 8h0v:A (3.8) BS05 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822114 8h0v:A (3.8) BS06 MG 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822115 8h0v:B (3.8) BS01 rna 2.7.7.6 GO:0001172 ... C4QZQ7 36435862
    822116 8h0v:B (3.8) BS02 dna 2.7.7.6 GO:0001172 ... C4QZQ7 36435862
    822117 8h0v:B (3.8) BS03 ZN 2.7.7.6 GO:0001172 ... C4QZQ7 36435862
    822118 8h0v:C (3.8) BS01 ZN ? GO:0000428 ... C4R7L2 36435862
    822119 8h0v:E (3.8) BS01 dna ? GO:0001172 ... C4R3P8 36435862
    822120 8h0v:I (3.8) BS01 ZN ? GO:0001193 ... F2QPE6 36435862
    822121 8h0v:I (3.8) BS02 ZN ? GO:0001193 ... F2QPE6 36435862
    822122 8h0v:J (3.8) BS01 ZN ? GO:0003677 ... C4R009 36435862
    822123 8h0v:L (3.8) BS01 ZN ? GO:0003677 ... F2QMI1 36435862
    822124 8h0v:a (3.8) BS01 dna ? GO:0000786 ... P68431 36435862
    822125 8h0v:a (3.8) BS02 dna ? GO:0000786 ... P68431 36435862
    822126 8h0v:b (3.8) BS01 dna ? GO:0000781 ... P62805 36435862
    822127 8h0v:b (3.8) BS02 dna ? GO:0000781 ... P62805 36435862
    822128 8h0v:c (3.8) BS01 dna ? GO:0000786 ... P04908 36435862
    822129 8h0v:c (3.8) BS02 dna ? GO:0000786 ... P04908 36435862
    822130 8h0v:d (3.8) BS01 dna ? GO:0000786 ... P06899 36435862
    822131 8h0v:d (3.8) BS02 dna ? GO:0000786 ... P06899 36435862
    822132 8h0v:e (3.8) BS01 dna ? GO:0000786 ... P68431 36435862
    822133 8h0v:e (3.8) BS02 dna ? GO:0000786 ... P68431 36435862
    822134 8h0v:f (3.8) BS01 dna ? GO:0000781 ... P62805 36435862
    822135 8h0v:f (3.8) BS02 dna ? GO:0000781 ... P62805 36435862
    822136 8h0v:g (3.8) BS01 dna ? GO:0000786 ... P04908 36435862
    822137 8h0v:g (3.8) BS02 dna ? GO:0000786 ... P04908 36435862
    822138 8h0v:h (3.8) BS01 dna ? GO:0000786 ... P06899 36435862
    822139 8h0v:h (3.8) BS02 dna ? GO:0000786 ... P06899 36435862
    822140 8h0v:u (3.8) BS01 dna ? GO:0000785 ... P16403 36435862
    822141 8h0w:A (4.6) BS01 rna 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822142 8h0w:A (4.6) BS02 dna 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822143 8h0w:A (4.6) BS03 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822144 8h0w:A (4.6) BS04 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822145 8h0w:A (4.6) BS05 MG 2.7.7.6 GO:0000785 ... C4R4Y0 36435862
    822146 8h0w:B (4.6) BS01 rna 2.7.7.6 GO:0001172 ... C4QZQ7 36435862
    822147 8h0w:B (4.6) BS02 dna 2.7.7.6 GO:0001172 ... C4QZQ7 36435862
    822148 8h0w:B (4.6) BS03 ZN 2.7.7.6 GO:0001172 ... C4QZQ7 36435862
    822149 8h0w:C (4.6) BS01 ZN ? GO:0000428 ... C4R7L2 36435862
    822150 8h0w:E (4.6) BS01 dna ? GO:0001172 ... C4R3P8 36435862
    822151 8h0w:I (4.6) BS01 ZN ? GO:0001193 ... F2QPE6 36435862
    822152 8h0w:I (4.6) BS02 ZN ? GO:0001193 ... F2QPE6 36435862
    822153 8h0w:J (4.6) BS01 ZN ? GO:0003677 ... C4R009 36435862
    822154 8h0w:L (4.6) BS01 ZN ? GO:0003677 ... F2QMI1 36435862
    822155 8h0w:a (4.6) BS01 dna ? GO:0000786 ... P68431 36435862
    822156 8h0w:a (4.6) BS02 dna ? GO:0000786 ... P68431 36435862
    822157 8h0w:b (4.6) BS01 dna ? GO:0000781 ... P62805 36435862
    822158 8h0w:b (4.6) BS02 dna ? GO:0000781 ... P62805 36435862
    822159 8h0w:c (4.6) BS01 dna ? GO:0000786 ... P04908 36435862
    822160 8h0w:c (4.6) BS02 dna ? GO:0000786 ... P04908 36435862
    822161 8h0w:d (4.6) BS01 dna ? GO:0000786 ... P06899 36435862
    822162 8h0w:d (4.6) BS02 dna ? GO:0000786 ... P06899 36435862
    822163 8h0w:e (4.6) BS01 dna ? GO:0000786 ... P68431 36435862
    822164 8h0w:e (4.6) BS02 dna ? GO:0000786 ... P68431 36435862
    822165 8h0w:f (4.6) BS01 dna ? GO:0000781 ... P62805 36435862
    822166 8h0w:f (4.6) BS02 dna ? GO:0000781 ... P62805 36435862
    822167 8h0w:g (4.6) BS01 dna ? GO:0000786 ... P04908 36435862
    822168 8h0w:g (4.6) BS02 dna ? GO:0000786 ... P04908 36435862
    822169 8h0w:h (4.6) BS01 dna ? GO:0000786 ... P06899 36435862
    822170 8h0w:h (4.6) BS02 dna ? GO:0000786 ... P06899 36435862
    822171 8h0w:u (4.6) BS01 dna ? GO:0000785 ... P16403 36435862
    822172 8h0x:A (2.57) BS01 EIC ? GO:0005515 ... P59594 37402591
    822173 8h0x:A (2.57) BS02 BLA ? GO:0005515 ... P59594 37402591
    822174 8h0x:B (2.57) BS01 EIC ? GO:0005515 ... P59594 37402591
    822175 8h0x:B (2.57) BS02 BLA ? GO:0005515 ... P59594 37402591
    822176 8h0x:C (2.57) BS01 EIC ? GO:0005515 ... P59594 37402591
    822177 8h0x:C (2.57) BS02 BLA ? GO:0005515 ... P59594 37402591
    822178 8h0y:A (2.85) BS01 EIC ? GO:0005515 ... P59594 37402591
    822179 8h0y:A (2.85) BS02 BLA ? GO:0005515 ... P59594 37402591
    822180 8h0y:B (2.85) BS01 EIC ? GO:0005515 ... P59594 37402591
    822181 8h0y:B (2.85) BS02 BLA ? GO:0005515 ... P59594 37402591
    822182 8h0y:C (2.85) BS01 EIC ? GO:0005515 ... P59594 37402591
    822183 8h0y:C (2.85) BS02 BLA ? GO:0005515 ... P59594 37402591
    822184 8h0z:A (2.99) BS01 EIC ? GO:0005515 ... P59594 37402591
    822185 8h0z:A (2.99) BS02 BLA ? GO:0005515 ... P59594 37402591
    822186 8h0z:B (2.99) BS01 BLA ? GO:0005515 ... P59594 37402591
    822187 8h0z:B (2.99) BS02 EIC ? GO:0005515 ... P59594 37402591
    822188 8h0z:C (2.99) BS01 EIC ? GO:0005515 ... P59594 37402591
    822189 8h0z:C (2.99) BS02 BLA ? GO:0005515 ... P59594 37402591
    822190 8h10:A (2.99) BS01 BLA ? GO:0005515 ... P59594 37402591
    822191 8h10:A (2.99) BS02 EIC ? GO:0005515 ... P59594 37402591
    822192 8h10:B (2.99) BS01 EIC ? GO:0005515 ... P59594 37402591
    822193 8h10:B (2.99) BS02 BLA ? GO:0005515 ... P59594 37402591
    822194 8h10:C (2.99) BS01 EIC ? GO:0005515 ... P59594 37402591
    822195 8h10:C (2.99) BS02 BLA ? GO:0005515 ... P59594 37402591
    822196 8h14:A (3.39) BS01 EIC ? GO:0005515 ... P59594 37402591
    822197 8h14:B (3.39) BS01 EIC ? GO:0005515 ... P59594 37402591
    822198 8h14:C (3.39) BS01 EIC ? GO:0005515 ... P59594 37402591
    822199 8h17:A (2.15) BS01 IMD ? GO:0019825 ... Q8DHH0 37076076
    822200 8h17:A (2.15) BS02 HEM ? GO:0019825 ... Q8DHH0 37076076

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).