SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    822001 8hpy:B (5.87) BS01 CA ? GO:0004222 ... Q9P0K1 N/A
    822002 8hpy:B (5.87) BS02 CA ? GO:0004222 ... Q9P0K1 N/A
    822003 8hpy:B (5.87) BS03 CA ? GO:0004222 ... Q9P0K1 N/A
    822004 8hpy:D (5.87) BS01 CA ? GO:0005102 ... O95970 N/A
    822005 8hpy:E (5.87) BS01 CA ? GO:0005102 ... O95970 N/A
    822006 8hq0:A () BS01 CA N/A N/A N/A N/A
    822007 8hq0:A () BS02 CA N/A N/A N/A N/A
    822008 8hq0:A () BS03 CA N/A N/A N/A N/A
    822009 8hq0:B () BS01 CA N/A N/A N/A N/A
    822010 8hq0:B () BS02 CA N/A N/A N/A N/A
    822011 8hq0:B () BS03 CA N/A N/A N/A N/A
    822012 8hq0:C () BS01 CA N/A N/A N/A N/A
    822013 8hq0:C () BS02 CA N/A N/A N/A N/A
    822014 8hq0:C () BS03 CA N/A N/A N/A N/A
    822015 8hq0:D () BS01 CA N/A N/A N/A N/A
    822016 8hq0:E () BS01 CA N/A N/A N/A N/A
    822017 8hq0:F () BS01 CA N/A N/A N/A N/A
    822018 8hq1:A (4.17) BS01 CA ? GO:0004222 ... Q9P0K1 N/A
    822019 8hq1:A (4.17) BS02 CA ? GO:0004222 ... Q9P0K1 N/A
    822020 8hq1:A (4.17) BS03 CA ? GO:0004222 ... Q9P0K1 N/A
    822021 8hq1:B (4.17) BS01 CA ? GO:0004222 ... Q9P0K1 N/A
    822022 8hq1:B (4.17) BS02 CA ? GO:0004222 ... Q9P0K1 N/A
    822023 8hq1:B (4.17) BS03 CA ? GO:0004222 ... Q9P0K1 N/A
    822024 8hq1:C (4.17) BS01 CA ? GO:0004222 ... Q9P0K1 N/A
    822025 8hq1:C (4.17) BS02 CA ? GO:0004222 ... Q9P0K1 N/A
    822026 8hq1:C (4.17) BS03 CA ? GO:0004222 ... Q9P0K1 N/A
    822027 8hq1:D (4.17) BS01 CA ? GO:0005102 ... O95970 N/A
    822028 8hq1:E (4.17) BS01 CA ? GO:0005102 ... O95970 N/A
    822029 8hq1:F (4.17) BS01 CA ? GO:0005102 ... O95970 N/A
    822030 8hq2:A (2.93) BS01 CA ? GO:0004222 ... Q9P0K1 N/A
    822031 8hq2:A (2.93) BS02 CA ? GO:0004222 ... Q9P0K1 N/A
    822032 8hq2:A (2.93) BS03 CA ? GO:0004222 ... Q9P0K1 N/A
    822033 8hq2:B (2.93) BS01 CA ? GO:0004222 ... Q9P0K1 N/A
    822034 8hq2:B (2.93) BS02 CA ? GO:0004222 ... Q9P0K1 N/A
    822035 8hq2:B (2.93) BS03 CA ? GO:0004222 ... Q9P0K1 N/A
    822036 8hq2:D (2.93) BS01 CA ? GO:0005102 ... O95970 N/A
    822037 8hq2:E (2.93) BS01 CA ? GO:0005102 ... O95970 N/A
    822038 8hq3:A (2.1) BS01 MG 3.6.5.- GO:0000054 ... P62826 37595020
    822039 8hq3:A (2.1) BS02 GTP 3.6.5.- GO:0000054 ... P62826 37595020
    822040 8hq3:C (2.1) BS01 MI8 ? GO:0000055 ... P30822 37595020
    822041 8hq4:A (2.12) BS01 MG 3.6.5.- GO:0000054 ... P62826 N/A
    822042 8hq4:A (2.12) BS02 GTP 3.6.5.- GO:0000054 ... P62826 N/A
    822043 8hq4:C (2.12) BS01 M9R ? GO:0000055 ... P30822 N/A
    822044 8hq5:A (2.25) BS01 MG 3.6.5.- GO:0000054 ... P62826 N/A
    822045 8hq5:A (2.25) BS02 GTP 3.6.5.- GO:0000054 ... P62826 N/A
    822046 8hq5:C (2.25) BS01 MBI ? GO:0000055 ... P30822 N/A
    822047 8hq6:A (2.03) BS01 MG 3.6.5.- GO:0000054 ... P62826 37595020
    822048 8hq6:A (2.03) BS02 GTP 3.6.5.- GO:0000054 ... P62826 37595020
    822049 8hq6:C (2.03) BS01 GLU ? GO:0000055 ... P30822 37595020
    822050 8hq6:C (2.03) BS02 MFF ? GO:0000055 ... P30822 37595020
    822051 8hq8:A (2.6) BS01 0IE N/A GO:0009765 ... N/A 37633266
    822052 8hq8:A (2.6) BS02 0IE N/A GO:0009765 ... N/A 37633266
    822053 8hq8:A (2.6) BS03 CHL N/A GO:0009765 ... N/A 37633266
    822054 8hq8:A (2.6) BS04 CHL N/A GO:0009765 ... N/A 37633266
    822055 8hq8:A (2.6) BS05 CLA N/A GO:0009765 ... N/A 37633266
    822056 8hq8:A (2.6) BS06 CLA N/A GO:0009765 ... N/A 37633266
    822057 8hq8:A (2.6) BS07 CHL N/A GO:0009765 ... N/A 37633266
    822058 8hq8:A (2.6) BS08 CHL N/A GO:0009765 ... N/A 37633266
    822059 8hq8:A (2.6) BS09 CHL N/A GO:0009765 ... N/A 37633266
    822060 8hq8:A (2.6) BS10 CHL N/A GO:0009765 ... N/A 37633266
    822061 8hq8:A (2.6) BS11 CHL N/A GO:0009765 ... N/A 37633266
    822062 8hq8:A (2.6) BS12 CLA N/A GO:0009765 ... N/A 37633266
    822063 8hq8:A (2.6) BS13 CLA N/A GO:0009765 ... N/A 37633266
    822064 8hq8:A (2.6) BS14 CLA N/A GO:0009765 ... N/A 37633266
    822065 8hq8:A (2.6) BS15 CLA N/A GO:0009765 ... N/A 37633266
    822066 8hq8:A (2.6) BS16 CHL N/A GO:0009765 ... N/A 37633266
    822067 8hq8:A (2.6) BS17 0UR N/A GO:0009765 ... N/A 37633266
    822068 8hq8:A (2.6) BS18 0UR N/A GO:0009765 ... N/A 37633266
    822069 8hq8:A (2.6) BS19 CHL N/A GO:0009765 ... N/A 37633266
    822070 8hq8:A (2.6) BS20 CHL N/A GO:0009765 ... N/A 37633266
    822071 8hq8:A (2.6) BS21 CHL N/A GO:0009765 ... N/A 37633266
    822072 8hq8:B (2.6) BS01 CHL N/A GO:0009765 ... N/A 37633266
    822073 8hq8:B (2.6) BS02 0IE N/A GO:0009765 ... N/A 37633266
    822074 8hq8:B (2.6) BS03 0UR N/A GO:0009765 ... N/A 37633266
    822075 8hq8:B (2.6) BS04 CHL N/A GO:0009765 ... N/A 37633266
    822076 8hq8:B (2.6) BS05 CHL N/A GO:0009765 ... N/A 37633266
    822077 8hq8:B (2.6) BS06 CLA N/A GO:0009765 ... N/A 37633266
    822078 8hq8:B (2.6) BS07 CLA N/A GO:0009765 ... N/A 37633266
    822079 8hq8:B (2.6) BS08 CHL N/A GO:0009765 ... N/A 37633266
    822080 8hq8:B (2.6) BS09 CHL N/A GO:0009765 ... N/A 37633266
    822081 8hq8:B (2.6) BS10 CHL N/A GO:0009765 ... N/A 37633266
    822082 8hq8:B (2.6) BS11 CHL N/A GO:0009765 ... N/A 37633266
    822083 8hq8:B (2.6) BS12 CHL N/A GO:0009765 ... N/A 37633266
    822084 8hq8:B (2.6) BS13 CLA N/A GO:0009765 ... N/A 37633266
    822085 8hq8:B (2.6) BS14 CLA N/A GO:0009765 ... N/A 37633266
    822086 8hq8:B (2.6) BS15 CLA N/A GO:0009765 ... N/A 37633266
    822087 8hq8:B (2.6) BS16 CLA N/A GO:0009765 ... N/A 37633266
    822088 8hq8:B (2.6) BS17 CHL N/A GO:0009765 ... N/A 37633266
    822089 8hq8:B (2.6) BS18 0UR N/A GO:0009765 ... N/A 37633266
    822090 8hq8:B (2.6) BS19 0IE N/A GO:0009765 ... N/A 37633266
    822091 8hq8:C (2.6) BS01 0IE N/A GO:0009765 ... N/A 37633266
    822092 8hq8:C (2.6) BS02 CHL N/A GO:0009765 ... N/A 37633266
    822093 8hq8:C (2.6) BS03 CHL N/A GO:0009765 ... N/A 37633266
    822094 8hq8:C (2.6) BS04 CHL N/A GO:0009765 ... N/A 37633266
    822095 8hq8:C (2.6) BS05 0IE N/A GO:0009765 ... N/A 37633266
    822096 8hq8:C (2.6) BS06 0IE N/A GO:0009765 ... N/A 37633266
    822097 8hq8:C (2.6) BS07 CHL N/A GO:0009765 ... N/A 37633266
    822098 8hq8:C (2.6) BS08 CHL N/A GO:0009765 ... N/A 37633266
    822099 8hq8:C (2.6) BS09 CLA N/A GO:0009765 ... N/A 37633266
    822100 8hq8:C (2.6) BS10 CLA N/A GO:0009765 ... N/A 37633266
    822101 8hq8:C (2.6) BS11 CHL N/A GO:0009765 ... N/A 37633266
    822102 8hq8:C (2.6) BS12 CHL N/A GO:0009765 ... N/A 37633266
    822103 8hq8:C (2.6) BS13 CHL N/A GO:0009765 ... N/A 37633266
    822104 8hq8:C (2.6) BS14 CHL N/A GO:0009765 ... N/A 37633266
    822105 8hq8:C (2.6) BS15 CHL N/A GO:0009765 ... N/A 37633266
    822106 8hq8:C (2.6) BS16 CLA N/A GO:0009765 ... N/A 37633266
    822107 8hq8:C (2.6) BS17 CLA N/A GO:0009765 ... N/A 37633266
    822108 8hq8:C (2.6) BS18 CLA N/A GO:0009765 ... N/A 37633266
    822109 8hq8:C (2.6) BS19 CLA N/A GO:0009765 ... N/A 37633266
    822110 8hq8:C (2.6) BS20 CHL N/A GO:0009765 ... N/A 37633266
    822111 8hq8:C (2.6) BS21 0UR N/A GO:0009765 ... N/A 37633266
    822112 8hq8:D (2.6) BS01 0IE N/A GO:0009765 ... N/A 37633266
    822113 8hq8:D (2.6) BS02 0IE N/A GO:0009765 ... N/A 37633266
    822114 8hq8:D (2.6) BS03 CHL N/A GO:0009765 ... N/A 37633266
    822115 8hq8:D (2.6) BS04 CHL N/A GO:0009765 ... N/A 37633266
    822116 8hq8:D (2.6) BS05 CLA N/A GO:0009765 ... N/A 37633266
    822117 8hq8:D (2.6) BS06 CLA N/A GO:0009765 ... N/A 37633266
    822118 8hq8:D (2.6) BS07 CHL N/A GO:0009765 ... N/A 37633266
    822119 8hq8:D (2.6) BS08 CHL N/A GO:0009765 ... N/A 37633266
    822120 8hq8:D (2.6) BS09 CHL N/A GO:0009765 ... N/A 37633266
    822121 8hq8:D (2.6) BS10 CHL N/A GO:0009765 ... N/A 37633266
    822122 8hq8:D (2.6) BS11 CHL N/A GO:0009765 ... N/A 37633266
    822123 8hq8:D (2.6) BS12 CLA N/A GO:0009765 ... N/A 37633266
    822124 8hq8:D (2.6) BS13 CLA N/A GO:0009765 ... N/A 37633266
    822125 8hq8:D (2.6) BS14 CLA N/A GO:0009765 ... N/A 37633266
    822126 8hq8:D (2.6) BS15 CLA N/A GO:0009765 ... N/A 37633266
    822127 8hq8:D (2.6) BS16 CHL N/A GO:0009765 ... N/A 37633266
    822128 8hq8:D (2.6) BS17 0UR N/A GO:0009765 ... N/A 37633266
    822129 8hq8:D (2.6) BS18 CHL N/A GO:0009765 ... N/A 37633266
    822130 8hq8:D (2.6) BS19 CHL N/A GO:0009765 ... N/A 37633266
    822131 8hq8:D (2.6) BS20 0IE N/A GO:0009765 ... N/A 37633266
    822132 8hq8:D (2.6) BS21 CHL N/A GO:0009765 ... N/A 37633266
    822133 8hq8:E (2.6) BS01 0IE N/A GO:0009765 ... N/A 37633266
    822134 8hq8:E (2.6) BS02 CHL N/A GO:0009765 ... N/A 37633266
    822135 8hq8:E (2.6) BS03 0IE N/A GO:0009765 ... N/A 37633266
    822136 8hq8:E (2.6) BS04 0IE N/A GO:0009765 ... N/A 37633266
    822137 8hq8:E (2.6) BS05 CHL N/A GO:0009765 ... N/A 37633266
    822138 8hq8:E (2.6) BS06 CHL N/A GO:0009765 ... N/A 37633266
    822139 8hq8:E (2.6) BS07 CLA N/A GO:0009765 ... N/A 37633266
    822140 8hq8:E (2.6) BS08 CLA N/A GO:0009765 ... N/A 37633266
    822141 8hq8:E (2.6) BS09 CHL N/A GO:0009765 ... N/A 37633266
    822142 8hq8:E (2.6) BS10 CHL N/A GO:0009765 ... N/A 37633266
    822143 8hq8:E (2.6) BS11 CHL N/A GO:0009765 ... N/A 37633266
    822144 8hq8:E (2.6) BS12 CHL N/A GO:0009765 ... N/A 37633266
    822145 8hq8:E (2.6) BS13 CHL N/A GO:0009765 ... N/A 37633266
    822146 8hq8:E (2.6) BS14 CLA N/A GO:0009765 ... N/A 37633266
    822147 8hq8:E (2.6) BS15 CLA N/A GO:0009765 ... N/A 37633266
    822148 8hq8:E (2.6) BS16 CLA N/A GO:0009765 ... N/A 37633266
    822149 8hq8:E (2.6) BS17 CLA N/A GO:0009765 ... N/A 37633266
    822150 8hq8:E (2.6) BS18 CHL N/A GO:0009765 ... N/A 37633266
    822151 8hq8:E (2.6) BS19 0UR N/A GO:0009765 ... N/A 37633266
    822152 8hq8:E (2.6) BS20 CHL N/A GO:0009765 ... N/A 37633266
    822153 8hq8:E (2.6) BS21 CHL N/A GO:0009765 ... N/A 37633266
    822154 8hq8:F (2.6) BS01 CHL N/A GO:0009765 ... N/A 37633266
    822155 8hq8:F (2.6) BS02 CHL N/A GO:0009765 ... N/A 37633266
    822156 8hq8:F (2.6) BS03 0IE N/A GO:0009765 ... N/A 37633266
    822157 8hq8:F (2.6) BS04 0IE N/A GO:0009765 ... N/A 37633266
    822158 8hq8:F (2.6) BS05 0IE N/A GO:0009765 ... N/A 37633266
    822159 8hq8:F (2.6) BS06 CHL N/A GO:0009765 ... N/A 37633266
    822160 8hq8:F (2.6) BS07 CHL N/A GO:0009765 ... N/A 37633266
    822161 8hq8:F (2.6) BS08 CLA N/A GO:0009765 ... N/A 37633266
    822162 8hq8:F (2.6) BS09 CLA N/A GO:0009765 ... N/A 37633266
    822163 8hq8:F (2.6) BS10 CHL N/A GO:0009765 ... N/A 37633266
    822164 8hq8:F (2.6) BS11 CHL N/A GO:0009765 ... N/A 37633266
    822165 8hq8:F (2.6) BS12 CHL N/A GO:0009765 ... N/A 37633266
    822166 8hq8:F (2.6) BS13 CHL N/A GO:0009765 ... N/A 37633266
    822167 8hq8:F (2.6) BS14 CHL N/A GO:0009765 ... N/A 37633266
    822168 8hq8:F (2.6) BS15 CLA N/A GO:0009765 ... N/A 37633266
    822169 8hq8:F (2.6) BS16 CLA N/A GO:0009765 ... N/A 37633266
    822170 8hq8:F (2.6) BS17 CLA N/A GO:0009765 ... N/A 37633266
    822171 8hq8:F (2.6) BS18 CLA N/A GO:0009765 ... N/A 37633266
    822172 8hq8:F (2.6) BS19 CHL N/A GO:0009765 ... N/A 37633266
    822173 8hq8:F (2.6) BS20 0UR N/A GO:0009765 ... N/A 37633266
    822174 8hq9:D (2.7) BS01 MG ? GO:0015914 ... P64604 38347327
    822175 8hqf:A (1.51) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822176 8hqf:B (1.51) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822177 8hqg:A (1.88) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822178 8hqg:B (1.88) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822179 8hqh:A (1.58) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822180 8hqh:B (1.58) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822181 8hqi:A (1.55) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822182 8hqi:B (1.55) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822183 8hqj:A (1.74) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822184 8hqj:B (1.74) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37357528
    822185 8hqm:R (2.95) BS01 140 ? GO:0000082 ... P0ABE7
    Q9UNW8
    37770763
    822186 8hqn:R (3.0) BS01 9HO ? GO:0000082 ... P0ABE7
    Q9UNW8
    37770763
    822187 8hqq:A (1.86) BS01 BGC ? GO:0042597 ... Q4FMK2 39261732
    822188 8hqr:A (1.32) BS01 ARG ? GO:0030313 ... Q4FLC2 39261732
    822189 8hqr:B (1.32) BS01 ARG ? GO:0030313 ... Q4FLC2 39261732
    822190 8hqt:A (1.8) BS01 peptide ? N/A P41811 37360012
    822191 8hqv:A (1.398) BS01 peptide ? N/A P41811 37360012
    822192 8hqx:A (1.538) BS01 peptide ? N/A P41811 37360012
    822193 8hqy:A (3.05) BS01 dna ? GO:0000786 ... Q71DI3 38177667
    822194 8hqy:A (3.05) BS02 dna ? GO:0000786 ... Q71DI3 38177667
    822195 8hqy:B (3.05) BS01 dna ? GO:0003677 ... P62805 38177667
    822196 8hqy:B (3.05) BS02 dna ? GO:0003677 ... P62805 38177667
    822197 8hqy:C (3.05) BS01 peptide ? GO:0000786 ... P04908 38177667
    822198 8hqy:C (3.05) BS02 dna ? GO:0000786 ... P04908 38177667
    822199 8hqy:C (3.05) BS03 dna ? GO:0000786 ... P04908 38177667
    822200 8hqy:D (3.05) BS01 peptide ? GO:0000786 ... O60814 38177667

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).