SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    822201 8h18:A (1.499) BS01 MG N/A GO:0003676 ... N/A 37663930
    822202 8h1b:A (1.55) BS01 rna 2.1.1.61 GO:0004808 ... Q2FXG9 36762482
    822203 8h1b:A (1.55) BS02 SAM 2.1.1.61 GO:0004808 ... Q2FXG9 36762482
    822204 8h1b:B (1.55) BS01 rna 2.1.1.61 GO:0004808 ... Q2FXG9 36762482
    822205 8h1b:B (1.55) BS02 SAM 2.1.1.61 GO:0004808 ... Q2FXG9 36762482
    822206 8h1c:A (4.5) BS01 rna 6.1.1.14 GO:0000166 ... Q0DFB6 36912079
    822207 8h1c:B (4.5) BS01 rna 6.1.1.14 GO:0000166 ... Q0DFB6 36912079
    822208 8h1e:A (1.22) BS01 MN ? GO:0005524 ... O67518 37487639
    822209 8h1e:A (1.22) BS02 MN ? GO:0005524 ... O67518 37487639
    822210 8h1e:A (1.22) BS03 MN ? GO:0005524 ... O67518 37487639
    822211 8h1f:A (1.22) BS01 ZN ? GO:0005524 ... O67518 37487639
    822212 8h1f:A (1.22) BS02 ZN ? GO:0005524 ... O67518 37487639
    822213 8h1g:A (1.43) BS01 CD ? GO:0005524 ... O67518 37487639
    822214 8h1g:A (1.43) BS02 CD ? GO:0005524 ... O67518 37487639
    822215 8h1i:A (2.1) BS01 CA ? GO:0001897 ... W6EBY7 N/A
    822216 8h1j:A (3.1) BS01 dna 3.1.21.- N/A Q7DF80 37020030
    822217 8h1j:A (3.1) BS02 rna 3.1.21.- N/A Q7DF80 37020030
    822218 8h1j:A (3.1) BS03 dna 3.1.21.- N/A Q7DF80 37020030
    822219 8h1j:A (3.1) BS04 ZN 3.1.21.- N/A Q7DF80 37020030
    822220 8h1l:B (2.33) BS01 SOR ? GO:0005975 ... A0A7U4E834 37314406
    822221 8h1l:C (2.33) BS01 SOR ? GO:0005975 ... A0A7U4E834 37314406
    822222 8h1n:A (2.67) BS01 SOR ? GO:0005975 ... A0A7U4E834 37314406
    822223 8h1o:A (2.67) BS01 GDP ? GO:0003924 ... W9BCK7 37429870
    822224 8h1q:A (1.5) BS01 PLS 2.3.1.50 GO:0004758 ... A7BFV6 37030501
    822225 8h1r:A (2.98) BS01 peptide ? GO:0009279 ... Q9I5U2 N/A
    822226 8h1r:A (2.98) BS02 PCJ ? GO:0009279 ... Q9I5U2 N/A
    822227 8h1r:D (2.98) BS01 peptide ? GO:0009279 ... Q9I5U2 N/A
    822228 8h1r:D (2.98) BS02 PCJ ? GO:0009279 ... Q9I5U2 N/A
    822229 8h1t:A (3.0) BS01 dna ? GO:0000786 ... P68431 36991118
    822230 8h1t:A (3.0) BS02 dna ? GO:0000786 ... P68431 36991118
    822231 8h1t:B (3.0) BS01 dna ? GO:0000781 ... P62805 36991118
    822232 8h1t:B (3.0) BS02 dna ? GO:0000781 ... P62805 36991118
    822233 8h1t:C (3.0) BS01 dna ? GO:0000786 ... P20671 36991118
    822234 8h1t:C (3.0) BS02 dna ? GO:0000786 ... P20671 36991118
    822235 8h1t:D (3.0) BS01 dna ? GO:0000786 ... Q16778 36991118
    822236 8h1t:D (3.0) BS02 dna ? GO:0000786 ... Q16778 36991118
    822237 8h1t:E (3.0) BS01 dna ? GO:0000786 ... P68431 36991118
    822238 8h1t:E (3.0) BS02 dna ? GO:0000786 ... P68431 36991118
    822239 8h1t:F (3.0) BS01 dna ? GO:0000781 ... P62805 36991118
    822240 8h1t:F (3.0) BS02 dna ? GO:0000781 ... P62805 36991118
    822241 8h1t:G (3.0) BS01 dna ? GO:0000786 ... P20671 36991118
    822242 8h1t:G (3.0) BS02 dna ? GO:0000786 ... P20671 36991118
    822243 8h1t:H (3.0) BS01 dna ? GO:0000786 ... Q16778 36991118
    822244 8h1t:H (3.0) BS02 dna ? GO:0000786 ... Q16778 36991118
    822245 8h1t:K (3.0) BS01 dna ? GO:0000785 ... P10412 36991118
    822246 8h1t:K (3.0) BS02 dna ? GO:0000785 ... P10412 36991118
    822247 8h1t:L (3.0) BS01 dna 3.4.19.12 GO:0000278 ... Q92560 36991118
    822248 8h1t:L (3.0) BS02 dna 3.4.19.12 GO:0000278 ... Q92560 36991118
    822249 8h1y:A (1.55) BS01 KPU 2.3.1.50 GO:0004758 ... A7BFV6 37030501
    822250 8h20:A (1.45) BS01 PLG 2.3.1.50 GO:0004758 ... A7BFV6 37030501
    822251 8h21:A (1.54) BS01 PDA 2.3.1.50 GO:0004758 ... A7BFV6 37030501
    822252 8h26:A (1.5) BS01 SAH 2.1.1.61 GO:0004808 ... Q2FXG9 N/A
    822253 8h26:B (1.5) BS01 SAH 2.1.1.61 GO:0004808 ... Q2FXG9 N/A
    822254 8h26:C (1.5) BS01 SAH 2.1.1.61 GO:0004808 ... Q2FXG9 N/A
    822255 8h26:D (1.5) BS01 SAH 2.1.1.61 GO:0004808 ... Q2FXG9 N/A
    822256 8h27:B (2.04) BS01 SAM 2.1.1.61 GO:0004808 ... Q2FXG9 36762482
    822257 8h28:A (2.06) BS01 HEC ? GO:0005506 ... A0A2Z6I6U9 37758155
    822258 8h28:B (2.06) BS01 HEC ? GO:0005506 ... A0A2Z6I6U9 37758155
    822259 8h29:A (1.45) BS01 2BO 2.3.1.50 GO:0004758 ... A7BFV6 37030501
    822260 8h2a:A (2.5) BS01 NAD 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822261 8h2a:A (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822262 8h2a:A (2.5) BS03 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822263 8h2a:B (2.5) BS01 NAD 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822264 8h2a:B (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822265 8h2a:B (2.5) BS03 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822266 8h2a:C (2.5) BS01 NAD 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822267 8h2a:C (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822268 8h2a:C (2.5) BS03 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822269 8h2a:D (2.5) BS01 NAD 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822270 8h2a:D (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822271 8h2a:D (2.5) BS03 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822272 8h2a:E (2.5) BS01 NAD 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822273 8h2a:E (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822274 8h2a:E (2.5) BS03 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822275 8h2a:F (2.5) BS01 NAD 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822276 8h2a:F (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822277 8h2a:F (2.5) BS03 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822278 8h2a:G (2.5) BS01 NAD 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822279 8h2a:G (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822280 8h2a:G (2.5) BS03 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822281 8h2a:H (2.5) BS01 NAD 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822282 8h2a:H (2.5) BS02 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822283 8h2a:H (2.5) BS03 ZN 1.1.1.1 GO:0004022 ... T2KM87 N/A
    822284 8h2b:A (2.1) BS01 NAD 1.1.1.1 GO:0004022 ... G0L712 N/A
    822285 8h2b:A (2.1) BS02 ZN 1.1.1.1 GO:0004022 ... G0L712 N/A
    822286 8h2b:A (2.1) BS03 ZN 1.1.1.1 GO:0004022 ... G0L712 N/A
    822287 8h2b:B (2.1) BS01 NAD 1.1.1.1 GO:0004022 ... G0L712 N/A
    822288 8h2b:B (2.1) BS02 ZN 1.1.1.1 GO:0004022 ... G0L712 N/A
    822289 8h2b:B (2.1) BS03 ZN 1.1.1.1 GO:0004022 ... G0L712 N/A
    822290 8h2b:C (2.1) BS01 NAD 1.1.1.1 GO:0004022 ... G0L712 N/A
    822291 8h2b:C (2.1) BS02 ZN 1.1.1.1 GO:0004022 ... G0L712 N/A
    822292 8h2b:C (2.1) BS03 ZN 1.1.1.1 GO:0004022 ... G0L712 N/A
    822293 8h2b:D (2.1) BS01 NAD 1.1.1.1 GO:0004022 ... G0L712 N/A
    822294 8h2b:D (2.1) BS02 ZN 1.1.1.1 GO:0004022 ... G0L712 N/A
    822295 8h2b:D (2.1) BS03 ZN 1.1.1.1 GO:0004022 ... G0L712 N/A
    822296 8h2c:A (2.9) BS01 MN 2.5.1.97 GO:0016051 ... Q0P8U0 36283338
    822297 8h2c:B (2.9) BS01 MN 2.5.1.97 GO:0016051 ... Q0P8U0 36283338
    822298 8h2c:C (2.9) BS01 MN 2.5.1.97 GO:0016051 ... Q0P8U0 36283338
    822299 8h2c:D (2.9) BS01 MN 2.5.1.97 GO:0016051 ... Q0P8U0 36283338
    822300 8h2f:A (1.448) BS01 TMP N/A GO:0003676 ... N/A 37663930
    822301 8h2f:A (1.448) BS02 MG N/A GO:0003676 ... N/A 37663930
    822302 8h2g:A (3.01) BS01 NIO ? GO:0001781 ... P0ABE7
    Q8TDS4
    N/A
    822303 8h2h:D (3.2) BS01 rna 2.7.7.49
    3.1.-.-
    GO:0003964 ... P0A3U0 36344519
    822304 8h2h:D (3.2) BS02 rna 2.7.7.49
    3.1.-.-
    GO:0003964 ... P0A3U0 36344519
    822305 8h2i:cX (3.8) BS01 peptide ? GO:0005198 ... Q89346 36309542
    822306 8h2i:cZ (3.8) BS01 peptide ? GO:0005198 ... Q89346 36309542
    822307 8h2i:da (3.8) BS01 peptide ? N/A Q89353 36309542
    822308 8h2i:db (3.8) BS01 peptide ? N/A Q89349 36309542
    822309 8h2i:dd (3.8) BS01 peptide ? GO:0005198 ... Q89346 36309542
    822310 8h2i:de (3.8) BS01 peptide ? GO:0005198 ... Q89345 36309542
    822311 8h2i:dg (3.8) BS01 peptide ? N/A Q89353 36309542
    822312 8h2i:dh (3.8) BS01 peptide ? N/A Q89349 36309542
    822313 8h2i:dk (3.8) BS01 peptide ? GO:0005198 ... Q89346 36309542
    822314 8h2i:dk (3.8) BS02 peptide ? GO:0005198 ... Q89346 36309542
    822315 8h2i:dl (3.8) BS01 peptide ? GO:0005198 ... Q89346 36309542
    822316 8h2j:A (2.4) BS01 4BW ? GO:0000166 ... A0A1C8HPQ3 36750095
    822317 8h2j:B (2.4) BS01 4BW ? GO:0000166 ... A0A1C8HPQ3 36750095
    822318 8h2j:C (2.4) BS01 4BW ? GO:0000166 ... A0A1C8HPQ3 36750095
    822319 8h2j:D (2.4) BS01 4BW ? GO:0000166 ... A0A1C8HPQ3 36750095
    822320 8h2j:E (2.4) BS01 4BW ? GO:0000166 ... A0A1C8HPQ3 36750095
    822321 8h2j:F (2.4) BS01 4BW ? GO:0000166 ... A0A1C8HPQ3 36750095
    822322 8h2n:A (4.41) BS01 MG ? N/A A7XXD0 38182597
    822323 8h2n:B (4.41) BS01 MG ? N/A A7XXD0 38182597
    822324 8h2n:C (4.41) BS01 MG ? N/A A7XXD0 38182597
    822325 8h2n:D (4.41) BS01 MG ? N/A A7XXD0 38182597
    822326 8h2t:B (2.59) BS01 FES ? GO:0005506 ... C5CSP6 37459330
    822327 8h2t:B (2.59) BS02 IAC ? GO:0005506 ... C5CSP6 37459330
    822328 8h2t:B (2.59) BS03 FE ? GO:0005506 ... C5CSP6 37459330
    822329 8h2t:D (2.59) BS01 FES ? GO:0005506 ... C5CSP6 37459330
    822330 8h2t:D (2.59) BS02 IAC ? GO:0005506 ... C5CSP6 37459330
    822331 8h2t:D (2.59) BS03 FE ? GO:0005506 ... C5CSP6 37459330
    822332 8h2t:G (2.59) BS01 FES ? GO:0005506 ... C5CSP6 37459330
    822333 8h2t:G (2.59) BS02 IAC ? GO:0005506 ... C5CSP6 37459330
    822334 8h2t:G (2.59) BS03 FE ? GO:0005506 ... C5CSP6 37459330
    822335 8h2u:0 (3.4) BS01 CLA ? GO:0009416 ... Q05093 37270022
    822336 8h2u:0 (3.4) BS02 CLA ? GO:0009416 ... Q05093 37270022
    822337 8h2u:0 (3.4) BS03 CLA ? GO:0009416 ... Q05093 37270022
    822338 8h2u:0 (3.4) BS04 CLA ? GO:0009416 ... Q05093 37270022
    822339 8h2u:0 (3.4) BS05 CLA ? GO:0009416 ... Q05093 37270022
    822340 8h2u:0 (3.4) BS06 CLA ? GO:0009416 ... Q05093 37270022
    822341 8h2u:0 (3.4) BS07 CLA ? GO:0009416 ... Q05093 37270022
    822342 8h2u:0 (3.4) BS08 CLA ? GO:0009416 ... Q05093 37270022
    822343 8h2u:0 (3.4) BS09 CLA ? GO:0009416 ... Q05093 37270022
    822344 8h2u:0 (3.4) BS10 CHL ? GO:0009416 ... Q05093 37270022
    822345 8h2u:0 (3.4) BS11 CHL ? GO:0009416 ... Q05093 37270022
    822346 8h2u:0 (3.4) BS12 CLA ? GO:0009416 ... Q05093 37270022
    822347 8h2u:0 (3.4) BS13 CHL ? GO:0009416 ... Q05093 37270022
    822348 8h2u:1 (3.4) BS01 CLA ? GO:0009416 ... Q05093 37270022
    822349 8h2u:1 (3.4) BS02 CLA ? GO:0009416 ... Q05093 37270022
    822350 8h2u:1 (3.4) BS03 CLA ? GO:0009416 ... Q05093 37270022
    822351 8h2u:1 (3.4) BS04 CLA ? GO:0009416 ... Q05093 37270022
    822352 8h2u:1 (3.4) BS05 CLA ? GO:0009416 ... Q05093 37270022
    822353 8h2u:1 (3.4) BS06 CLA ? GO:0009416 ... Q05093 37270022
    822354 8h2u:1 (3.4) BS07 CLA ? GO:0009416 ... Q05093 37270022
    822355 8h2u:1 (3.4) BS08 CLA ? GO:0009416 ... Q05093 37270022
    822356 8h2u:1 (3.4) BS09 CHL ? GO:0009416 ... Q05093 37270022
    822357 8h2u:1 (3.4) BS10 CHL ? GO:0009416 ... Q05093 37270022
    822358 8h2u:1 (3.4) BS11 CLA ? GO:0009416 ... Q05093 37270022
    822359 8h2u:1 (3.4) BS12 CHL ? GO:0009416 ... Q05093 37270022
    822360 8h2u:1 (3.4) BS13 CLA ? GO:0009416 ... Q05093 37270022
    822361 8h2u:3 (3.4) BS01 CLA N/A GO:0009765 ... N/A 37270022
    822362 8h2u:3 (3.4) BS02 CLA N/A GO:0009765 ... N/A 37270022
    822363 8h2u:3 (3.4) BS03 CHL N/A GO:0009765 ... N/A 37270022
    822364 8h2u:3 (3.4) BS04 CLA N/A GO:0009765 ... N/A 37270022
    822365 8h2u:3 (3.4) BS05 CLA N/A GO:0009765 ... N/A 37270022
    822366 8h2u:3 (3.4) BS06 CLA N/A GO:0009765 ... N/A 37270022
    822367 8h2u:3 (3.4) BS07 CLA N/A GO:0009765 ... N/A 37270022
    822368 8h2u:3 (3.4) BS08 CLA N/A GO:0009765 ... N/A 37270022
    822369 8h2u:3 (3.4) BS09 CLA N/A GO:0009765 ... N/A 37270022
    822370 8h2u:3 (3.4) BS10 CLA N/A GO:0009765 ... N/A 37270022
    822371 8h2u:3 (3.4) BS11 CLA N/A GO:0009765 ... N/A 37270022
    822372 8h2u:3 (3.4) BS12 CLA N/A GO:0009765 ... N/A 37270022
    822373 8h2u:3 (3.4) BS13 CHL N/A GO:0009765 ... N/A 37270022
    822374 8h2u:3 (3.4) BS14 CLA N/A GO:0009765 ... N/A 37270022
    822375 8h2u:3 (3.4) BS15 CLA N/A GO:0009765 ... N/A 37270022
    822376 8h2u:4 (3.4) BS01 CLA ? GO:0009416 ... Q75VZ0 37270022
    822377 8h2u:4 (3.4) BS02 CLA ? GO:0009416 ... Q75VZ0 37270022
    822378 8h2u:4 (3.4) BS03 CLA ? GO:0009416 ... Q75VZ0 37270022
    822379 8h2u:4 (3.4) BS04 CLA ? GO:0009416 ... Q75VZ0 37270022
    822380 8h2u:4 (3.4) BS05 CLA ? GO:0009416 ... Q75VZ0 37270022
    822381 8h2u:4 (3.4) BS06 CLA ? GO:0009416 ... Q75VZ0 37270022
    822382 8h2u:4 (3.4) BS07 CLA ? GO:0009416 ... Q75VZ0 37270022
    822383 8h2u:4 (3.4) BS08 CLA ? GO:0009416 ... Q75VZ0 37270022
    822384 8h2u:4 (3.4) BS09 CLA ? GO:0009416 ... Q75VZ0 37270022
    822385 8h2u:4 (3.4) BS10 CHL ? GO:0009416 ... Q75VZ0 37270022
    822386 8h2u:4 (3.4) BS11 CHL ? GO:0009416 ... Q75VZ0 37270022
    822387 8h2u:4 (3.4) BS12 CLA ? GO:0009416 ... Q75VZ0 37270022
    822388 8h2u:4 (3.4) BS13 CHL ? GO:0009416 ... Q75VZ0 37270022
    822389 8h2u:4 (3.4) BS14 CHL ? GO:0009416 ... Q75VZ0 37270022
    822390 8h2u:4 (3.4) BS15 CLA ? GO:0009416 ... Q75VZ0 37270022
    822391 8h2u:5 (3.4) BS01 CLA ? GO:0009416 ... Q75VY8 37270022
    822392 8h2u:5 (3.4) BS02 CLA ? GO:0009416 ... Q75VY8 37270022
    822393 8h2u:5 (3.4) BS03 CLA ? GO:0009416 ... Q75VY8 37270022
    822394 8h2u:5 (3.4) BS04 CLA ? GO:0009416 ... Q75VY8 37270022
    822395 8h2u:5 (3.4) BS05 CLA ? GO:0009416 ... Q75VY8 37270022
    822396 8h2u:5 (3.4) BS06 CLA ? GO:0009416 ... Q75VY8 37270022
    822397 8h2u:5 (3.4) BS07 CLA ? GO:0009416 ... Q75VY8 37270022
    822398 8h2u:5 (3.4) BS08 CLA ? GO:0009416 ... Q75VY8 37270022
    822399 8h2u:5 (3.4) BS09 CLA ? GO:0009416 ... Q75VY8 37270022
    822400 8h2u:5 (3.4) BS10 CLA ? GO:0009416 ... Q75VY8 37270022

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).