SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    822201 8hqy:D (3.05) BS02 dna ? GO:0000786 ... O60814 38177667
    822202 8hqy:D (3.05) BS03 dna ? GO:0000786 ... O60814 38177667
    822203 8hqy:E (3.05) BS01 dna ? GO:0000786 ... Q71DI3 38177667
    822204 8hqy:E (3.05) BS02 dna ? GO:0000786 ... Q71DI3 38177667
    822205 8hqy:F (3.05) BS01 dna ? GO:0003677 ... P62805 38177667
    822206 8hqy:F (3.05) BS02 dna ? GO:0003677 ... P62805 38177667
    822207 8hqy:G (3.05) BS01 dna ? GO:0000786 ... P04908 38177667
    822208 8hqy:G (3.05) BS02 dna ? GO:0000786 ... P04908 38177667
    822209 8hqy:H (3.05) BS01 dna ? GO:0000786 ... O60814 38177667
    822210 8hqy:H (3.05) BS02 dna ? GO:0000786 ... O60814 38177667
    822211 8hqy:U (3.05) BS01 peptide ? N/A P0CG47 38177667
    822212 8hr0:A (3.34) BS01 ZN ? GO:0000139 ... Q15436 37360012
    822213 8hr0:B (3.34) BS01 peptide ? GO:0006886 ... O95486 37360012
    822214 8hr0:B (3.34) BS02 ZN ? GO:0006886 ... O95486 37360012
    822215 8hr1:A (3.02) BS01 dna ? GO:0000786 ... Q71DI3 38177667
    822216 8hr1:A (3.02) BS02 dna ? GO:0000786 ... Q71DI3 38177667
    822217 8hr1:B (3.02) BS01 dna ? GO:0003677 ... P62805 38177667
    822218 8hr1:B (3.02) BS02 dna ? GO:0003677 ... P62805 38177667
    822219 8hr1:C (3.02) BS01 peptide ? GO:0000786 ... P04908 38177667
    822220 8hr1:C (3.02) BS02 dna ? GO:0000786 ... P04908 38177667
    822221 8hr1:C (3.02) BS03 dna ? GO:0000786 ... P04908 38177667
    822222 8hr1:D (3.02) BS01 peptide ? GO:0000786 ... O60814 38177667
    822223 8hr1:D (3.02) BS02 dna ? GO:0000786 ... O60814 38177667
    822224 8hr1:D (3.02) BS03 dna ? GO:0000786 ... O60814 38177667
    822225 8hr1:E (3.02) BS01 dna ? GO:0000786 ... Q71DI3 38177667
    822226 8hr1:E (3.02) BS02 dna ? GO:0000786 ... Q71DI3 38177667
    822227 8hr1:F (3.02) BS01 dna ? GO:0003677 ... P62805 38177667
    822228 8hr1:F (3.02) BS02 dna ? GO:0003677 ... P62805 38177667
    822229 8hr1:G (3.02) BS01 dna ? GO:0000786 ... P04908 38177667
    822230 8hr1:G (3.02) BS02 dna ? GO:0000786 ... P04908 38177667
    822231 8hr1:H (3.02) BS01 dna ? GO:0000786 ... O60814 38177667
    822232 8hr1:H (3.02) BS02 dna ? GO:0000786 ... O60814 38177667
    822233 8hr5:A (3.73) BS01 rna N/A N/A N/A N/A
    822234 8hr5:A (3.73) BS02 dna N/A N/A N/A N/A
    822235 8hr5:A (3.73) BS03 dna N/A N/A N/A N/A
    822236 8hr6:A (3.52) BS01 NAD 1.4.1.9 GO:0000166 ... A0A9X5N1L9 36946691
    822237 8hr6:B (3.52) BS01 NAD 1.4.1.9 GO:0000166 ... A0A9X5N1L9 36946691
    822238 8hr8:A (3.3) BS01 ATP N/A N/A N/A 36764292
    822239 8hr8:C (3.3) BS01 ATP N/A N/A N/A 36764292
    822240 8hr8:F (3.3) BS01 ATP N/A N/A N/A 36764292
    822241 8hr8:G (3.3) BS01 ATP N/A N/A N/A 36764292
    822242 8hr8:H (3.3) BS01 ATP N/A N/A N/A 36764292
    822243 8hr9:A (3.03) BS01 ATP N/A N/A N/A 36764292
    822244 8hr9:C (3.03) BS01 ATP N/A N/A N/A 36764292
    822245 8hr9:F (3.03) BS01 ATP N/A N/A N/A 36764292
    822246 8hr9:G (3.03) BS01 ATP N/A N/A N/A 36764292
    822247 8hr9:H (3.03) BS01 ATP N/A N/A N/A 36764292
    822248 8hr9:I (3.03) BS01 ATP N/A N/A N/A 36764292
    822249 8hr9:J (3.03) BS01 ATP N/A N/A N/A 36764292
    822250 8hr9:M (3.03) BS01 ATP N/A N/A N/A 36764292
    822251 8hr9:N (3.03) BS01 ATP N/A N/A N/A 36764292
    822252 8hr9:O (3.03) BS01 ATP N/A N/A N/A 36764292
    822253 8hra:A (3.76) BS01 rna N/A N/A N/A 36764292
    822254 8hra:B (3.76) BS01 rna N/A N/A N/A 36764292
    822255 8hra:B (3.76) BS02 ATP N/A N/A N/A 36764292
    822256 8hra:C (3.76) BS01 rna N/A N/A N/A 36764292
    822257 8hra:D (3.76) BS01 rna N/A N/A N/A 36764292
    822258 8hra:E (3.76) BS01 rna N/A N/A N/A 36764292
    822259 8hra:E (3.76) BS02 ATP N/A N/A N/A 36764292
    822260 8hra:G (3.76) BS01 ATP N/A N/A N/A 36764292
    822261 8hra:H (3.76) BS01 rna N/A N/A N/A 36764292
    822262 8hra:H (3.76) BS02 ATP N/A N/A N/A 36764292
    822263 8hrb:A (3.78) BS01 rna N/A N/A N/A 36764292
    822264 8hrb:B (3.78) BS01 rna N/A N/A N/A 36764292
    822265 8hrb:B (3.78) BS02 ATP N/A N/A N/A 36764292
    822266 8hrb:C (3.78) BS01 rna N/A N/A N/A 36764292
    822267 8hrb:D (3.78) BS01 rna N/A N/A N/A 36764292
    822268 8hrb:E (3.78) BS01 rna N/A N/A N/A 36764292
    822269 8hrb:E (3.78) BS02 ATP N/A N/A N/A 36764292
    822270 8hrb:F (3.78) BS01 rna N/A N/A N/A 36764292
    822271 8hrb:G (3.78) BS01 ATP N/A N/A N/A 36764292
    822272 8hrb:H (3.78) BS01 rna N/A N/A N/A 36764292
    822273 8hrb:H (3.78) BS02 ATP N/A N/A N/A 36764292
    822274 8hrb:K (3.78) BS01 rna N/A N/A N/A 36764292
    822275 8hrb:K (3.78) BS02 ATP N/A N/A N/A 36764292
    822276 8hrb:L (3.78) BS01 rna N/A N/A N/A 36764292
    822277 8hrb:M (3.78) BS01 rna N/A N/A N/A 36764292
    822278 8hrb:P (3.78) BS01 rna N/A N/A N/A 36764292
    822279 8hrb:P (3.78) BS02 ATP N/A N/A N/A 36764292
    822280 8hrb:Q (3.78) BS01 ATP N/A N/A N/A 36764292
    822281 8hrb:R (3.78) BS01 rna N/A N/A N/A 36764292
    822282 8hrb:R (3.78) BS02 ATP N/A N/A N/A 36764292
    822283 8hrf:A (2.5) BS01 CA ? GO:0004553 ... A0A9Q3UC14 N/A
    822284 8hrf:B (2.5) BS01 CA ? GO:0004553 ... A0A9Q3UC14 N/A
    822285 8hrf:B (2.5) BS02 CA ? GO:0004553 ... A0A9Q3UC14 N/A
    822286 8hrh:A (2.07) BS01 ASP N/A N/A N/A 37547453
    822287 8hrh:A (2.07) BS02 ARG N/A N/A N/A 37547453
    822288 8hrh:B (2.07) BS01 ARG N/A N/A N/A 37547453
    822289 8hrh:B (2.07) BS02 PRO N/A N/A N/A 37547453
    822290 8hro:A (2.59) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822291 8hro:B (2.59) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822292 8hrp:A (1.99) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822293 8hrp:A (1.99) BS02 G3H 1.2.1.12 GO:0000166 ... Q01651 37935620
    822294 8hrp:B (1.99) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822295 8hrp:B (1.99) BS02 G3H 1.2.1.12 GO:0000166 ... Q01651 37935620
    822296 8hrp:C (1.99) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822297 8hrp:C (1.99) BS02 G3H 1.2.1.12 GO:0000166 ... Q01651 37935620
    822298 8hrp:D (1.99) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822299 8hrp:D (1.99) BS02 G3H 1.2.1.12 GO:0000166 ... Q01651 37935620
    822300 8hrp:E (1.99) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822301 8hrp:E (1.99) BS02 G3H 1.2.1.12 GO:0000166 ... Q01651 37935620
    822302 8hrp:F (1.99) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822303 8hrp:F (1.99) BS02 G3H 1.2.1.12 GO:0000166 ... Q01651 37935620
    822304 8hrp:G (1.99) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822305 8hrp:G (1.99) BS02 G3H 1.2.1.12 GO:0000166 ... Q01651 37935620
    822306 8hrp:H (1.99) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822307 8hrp:H (1.99) BS02 G3H 1.2.1.12 GO:0000166 ... Q01651 37935620
    822308 8hrq:A (2.09) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822309 8hrq:B (2.09) BS01 NAD 1.2.1.12 GO:0000166 ... Q01651 37935620
    822310 8hrr:A (2.0) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822311 8hrr:B (2.0) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822312 8hrs:A (2.0) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822313 8hrs:B (2.0) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822314 8hrs:C (2.0) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822315 8hrs:D (2.0) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822316 8hrt:A (1.99) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822317 8hrt:B (1.99) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822318 8hrt:C (1.99) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822319 8hrt:D (1.99) BS01 NAP 1.2.1.12 GO:0000166 ... Q01651 37935620
    822320 8hrv:A (2.0) BS01 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822321 8hrv:A (2.0) BS02 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822322 8hrv:A (2.0) BS03 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822323 8hrv:B (2.0) BS01 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822324 8hrv:B (2.0) BS02 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822325 8hrv:B (2.0) BS03 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822326 8hrv:C (2.0) BS01 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822327 8hrv:C (2.0) BS02 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822328 8hrv:C (2.0) BS03 DUP 3.6.1.23 GO:0000287 ... O25536 N/A
    822329 8hrz:A (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822330 8hrz:B (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822331 8hrz:C (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822332 8hrz:D (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822333 8hrz:E (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822334 8hrz:F (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822335 8hrz:G (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822336 8hrz:H (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822337 8hrz:I (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822338 8hrz:J (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822339 8hrz:K (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822340 8hrz:L (2.7) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    822341 8hs0:A (1.42) BS01 FES 4.2.1.9 GO:0003824 ... Q9LIR4 39494391
    822342 8hs0:A (1.42) BS02 MG 4.2.1.9 GO:0003824 ... Q9LIR4 39494391
    822343 8hs4:A (2.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822344 8hs4:B (2.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822345 8hs5:A (2.3) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822346 8hs5:B (2.3) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822347 8hs7:A (2.0) BS01 EDT ? GO:0005789 ... P40075 N/A
    822348 8hsa:A (3.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822349 8hsa:B (3.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822350 8hsa:C (3.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822351 8hsa:D (3.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822352 8hsa:E (3.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822353 8hsa:F (3.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822354 8hsa:G (3.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822355 8hsa:H (3.0) BS01 NAD 1.1.1.159 GO:0016491 ... Q8YIN7 N/A
    822356 8hsg:I (3.2) BS01 dna 2.7.7.6 GO:0000428 ... Q8RQE9 36753546
    822357 8hsg:I (3.2) BS02 rna 2.7.7.6 GO:0000428 ... Q8RQE9 36753546
    822358 8hsg:I (3.2) BS03 dna 2.7.7.6 GO:0000428 ... Q8RQE9 36753546
    822359 8hsg:J (3.2) BS01 dna 2.7.7.6 GO:0000287 ... Q8RQE8 36753546
    822360 8hsg:J (3.2) BS02 rna 2.7.7.6 GO:0000287 ... Q8RQE8 36753546
    822361 8hsg:J (3.2) BS03 dna 2.7.7.6 GO:0000287 ... Q8RQE8 36753546
    822362 8hsg:J (3.2) BS04 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 36753546
    822363 8hsg:J (3.2) BS05 MG 2.7.7.6 GO:0000287 ... Q8RQE8 36753546
    822364 8hsh:J (3.4) BS01 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 36753546
    822365 8hsh:J (3.4) BS02 MG 2.7.7.6 GO:0000287 ... Q8RQE8 36753546
    822366 8hsi:A (3.1) BS01 L9Q ? GO:0016020 ... Q8NBN3 38992057
    822367 8hsi:A (3.1) BS02 CLR ? GO:0016020 ... Q8NBN3 38992057
    822368 8hsi:A (3.1) BS03 CLR ? GO:0016020 ... Q8NBN3 38992057
    822369 8hsj:A (3.6) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822370 8hsj:A (3.6) BS02 MG 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822371 8hsj:A (3.6) BS03 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822372 8hsj:B (3.6) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822373 8hsj:B (3.6) BS02 MG 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822374 8hsj:B (3.6) BS03 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822375 8hsj:C (3.6) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822376 8hsj:C (3.6) BS02 MG 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822377 8hsj:C (3.6) BS03 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822378 8hsj:D (3.6) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822379 8hsj:D (3.6) BS02 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822380 8hsj:E (3.6) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822381 8hsj:E (3.6) BS02 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822382 8hsj:F (3.6) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822383 8hsj:F (3.6) BS02 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822384 8hsk:B (1.64) BS01 peptide ? GO:0005179 ... P01308 N/A
    822385 8hsl:A (5.8) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822386 8hsl:A (5.8) BS02 MG 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822387 8hsl:A (5.8) BS03 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822388 8hsl:B (5.8) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822389 8hsl:B (5.8) BS02 MG 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822390 8hsl:B (5.8) BS03 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822391 8hsl:C (5.8) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822392 8hsl:C (5.8) BS02 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822393 8hsl:D (5.8) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822394 8hsl:D (5.8) BS02 MG 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822395 8hsl:D (5.8) BS03 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822396 8hsl:E (5.8) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822397 8hsl:E (5.8) BS02 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822398 8hsl:F (5.8) BS01 ADP 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822399 8hsl:F (5.8) BS02 BEF 3.6.4.- GO:0003723 ... Q5SJE9 36753546
    822400 8hsl:J (5.8) BS01 ZN 2.7.7.6 GO:0000287 ... Q8RQE8 36753546

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).