SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    822801 8htu:U (2.87) BS15 CHL ? GO:0009416 ... A9RT62 37474782
    822802 8htu:V (2.87) BS01 CLA ? GO:0009416 ... A9RT62 37474782
    822803 8htu:V (2.87) BS02 CHL ? GO:0009416 ... A9RT62 37474782
    822804 8htu:V (2.87) BS03 CLA ? GO:0009416 ... A9RT62 37474782
    822805 8htu:V (2.87) BS04 CLA ? GO:0009416 ... A9RT62 37474782
    822806 8htu:V (2.87) BS05 CLA ? GO:0009416 ... A9RT62 37474782
    822807 8htu:V (2.87) BS06 CHL ? GO:0009416 ... A9RT62 37474782
    822808 8htu:V (2.87) BS07 CHL ? GO:0009416 ... A9RT62 37474782
    822809 8htu:V (2.87) BS08 CHL ? GO:0009416 ... A9RT62 37474782
    822810 8htu:V (2.87) BS09 CHL ? GO:0009416 ... A9RT62 37474782
    822811 8htu:V (2.87) BS10 CHL ? GO:0009416 ... A9RT62 37474782
    822812 8htu:V (2.87) BS11 CLA ? GO:0009416 ... A9RT62 37474782
    822813 8htu:V (2.87) BS12 CLA ? GO:0009416 ... A9RT62 37474782
    822814 8htu:V (2.87) BS13 CLA ? GO:0009416 ... A9RT62 37474782
    822815 8htu:V (2.87) BS14 CLA ? GO:0009416 ... A9RT62 37474782
    822816 8htu:V (2.87) BS15 CLA ? GO:0009416 ... A9RT62 37474782
    822817 8htu:V (2.87) BS16 CHL ? GO:0009416 ... A9RT62 37474782
    822818 8htu:W (2.87) BS01 CHL ? GO:0009416 ... A9RT62 37474782
    822819 8htu:W (2.87) BS02 CLA ? GO:0009416 ... A9RT62 37474782
    822820 8htu:W (2.87) BS03 CHL ? GO:0009416 ... A9RT62 37474782
    822821 8htu:W (2.87) BS04 CLA ? GO:0009416 ... A9RT62 37474782
    822822 8htu:W (2.87) BS05 CLA ? GO:0009416 ... A9RT62 37474782
    822823 8htu:W (2.87) BS06 CLA ? GO:0009416 ... A9RT62 37474782
    822824 8htu:W (2.87) BS07 CHL ? GO:0009416 ... A9RT62 37474782
    822825 8htu:W (2.87) BS08 CHL ? GO:0009416 ... A9RT62 37474782
    822826 8htu:W (2.87) BS09 CHL ? GO:0009416 ... A9RT62 37474782
    822827 8htu:W (2.87) BS10 CHL ? GO:0009416 ... A9RT62 37474782
    822828 8htu:W (2.87) BS11 CHL ? GO:0009416 ... A9RT62 37474782
    822829 8htu:W (2.87) BS12 CLA ? GO:0009416 ... A9RT62 37474782
    822830 8htu:W (2.87) BS13 CLA ? GO:0009416 ... A9RT62 37474782
    822831 8htu:W (2.87) BS14 CLA ? GO:0009416 ... A9RT62 37474782
    822832 8htu:W (2.87) BS15 CLA ? GO:0009416 ... A9RT62 37474782
    822833 8htu:W (2.87) BS16 CLA ? GO:0009416 ... A9RT62 37474782
    822834 8htv:A (2.04) BS01 UZF 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37594952
    822835 8htx:A (2.8) BS01 dna ? GO:0003677 ... Q8N9N5 37086783
    822836 8htx:A (2.8) BS02 dna ? GO:0003677 ... Q8N9N5 37086783
    822837 8htx:A (2.8) BS03 dna ? GO:0003677 ... Q8N9N5 37086783
    822838 8htx:B (2.8) BS01 dna ? GO:0003677 ... Q8N9N5 37086783
    822839 8htx:B (2.8) BS02 dna ? GO:0003677 ... Q8N9N5 37086783
    822840 8htz:0 (2.4) BS01 rna ? GO:0000027 ... P0A7N9 38538915
    822841 8htz:1 (2.4) BS01 rna ? GO:0002181 ... P0A7P5 38538915
    822842 8htz:2 (2.4) BS01 rna ? GO:0002181 ... P0A7Q1 38538915
    822843 8htz:3 (2.4) BS01 rna ? GO:0002181 ... P0A7Q6 38538915
    822844 8htz:4 (2.4) BS01 rna ? GO:0002181 ... P0A7M9 38538915
    822845 8htz:B (2.4) BS01 rna ? GO:0000028 ... P0A7V0 38538915
    822846 8htz:C (2.4) BS01 rna ? GO:0000028 ... P0A7V3 38538915
    822847 8htz:D (2.4) BS01 rna ? GO:0000028 ... P0A7V8 38538915
    822848 8htz:E (2.4) BS01 rna ? GO:0000028 ... P0A7W1 38538915
    822849 8htz:F (2.4) BS01 rna ? GO:0002181 ... P02358 38538915
    822850 8htz:G (2.4) BS01 rna ? GO:0000028 ... P02359 38538915
    822851 8htz:H (2.4) BS01 rna ? GO:0000028 ... P0A7W7 38538915
    822852 8htz:I (2.4) BS01 rna ? GO:0000049 ... P0A7X3 38538915
    822853 8htz:I (2.4) BS02 rna ? GO:0000049 ... P0A7X3 38538915
    822854 8htz:J (2.4) BS01 rna ? GO:0000049 ... P0A7R5 38538915
    822855 8htz:K (2.4) BS01 rna ? GO:0002181 ... P0A7R9 38538915
    822856 8htz:L (2.4) BS01 rna ? GO:0000049 ... P0A7S3 38538915
    822857 8htz:L (2.4) BS02 rna ? GO:0000049 ... P0A7S3 38538915
    822858 8htz:M (2.4) BS01 rna ? GO:0000049 ... P0A7S9 38538915
    822859 8htz:M (2.4) BS02 rna ? GO:0000049 ... P0A7S9 38538915
    822860 8htz:N (2.4) BS01 rna ? GO:0000028 ... P0AG59 38538915
    822861 8htz:O (2.4) BS01 rna ? GO:0000028 ... P0ADZ4 38538915
    822862 8htz:O (2.4) BS02 rna ? GO:0000028 ... P0ADZ4 38538915
    822863 8htz:P (2.4) BS01 rna ? GO:0000028 ... P0A7T3 38538915
    822864 8htz:Q (2.4) BS01 rna ? GO:0000028 ... P0AG63 38538915
    822865 8htz:R (2.4) BS01 rna ? GO:0002181 ... P0A7T7 38538915
    822866 8htz:S (2.4) BS01 rna ? GO:0000028 ... P0A7U3 38538915
    822867 8htz:T (2.4) BS01 rna ? GO:0000028 ... P0A7U7 38538915
    822868 8htz:U (2.4) BS01 rna ? GO:0000028 ... P68679 38538915
    822869 8htz:c (2.4) BS01 rna ? GO:0000027 ... P60422 38538915
    822870 8htz:c (2.4) BS02 rna ? GO:0000027 ... P60422 38538915
    822871 8htz:d (2.4) BS01 rna ? GO:0000027 ... P60438 38538915
    822872 8htz:e (2.4) BS01 rna ? GO:0001070 ... P60723 38538915
    822873 8htz:f (2.4) BS01 rna ? GO:0000027 ... P62399 38538915
    822874 8htz:f (2.4) BS02 rna ? GO:0000027 ... P62399 38538915
    822875 8htz:f (2.4) BS03 rna ? GO:0000027 ... P62399 38538915
    822876 8htz:g (2.4) BS01 rna ? GO:0000027 ... P0AG55 38538915
    822877 8htz:h (2.4) BS01 rna ? GO:0002181 ... P0A7R1 38538915
    822878 8htz:i (2.4) BS01 rna ? GO:0002181 ... P0AA10 38538915
    822879 8htz:j (2.4) BS01 rna ? GO:0002181 ... P0ADY3 38538915
    822880 8htz:j (2.4) BS02 rna ? GO:0002181 ... P0ADY3 38538915
    822881 8htz:k (2.4) BS01 rna ? GO:0002181 ... P02413 38538915
    822882 8htz:l (2.4) BS01 rna ? GO:0000027 ... P0ADY7 38538915
    822883 8htz:l (2.4) BS02 rna ? GO:0000027 ... P0ADY7 38538915
    822884 8htz:l (2.4) BS03 rna ? GO:0000027 ... P0ADY7 38538915
    822885 8htz:m (2.4) BS01 rna ? GO:0000027 ... P0AG44 38538915
    822886 8htz:n (2.4) BS01 rna ? GO:0002181 ... P0C018 38538915
    822887 8htz:n (2.4) BS02 rna ? GO:0002181 ... P0C018 38538915
    822888 8htz:o (2.4) BS01 rna ? GO:0000027 ... P0A7K6 38538915
    822889 8htz:o (2.4) BS02 rna ? GO:0000027 ... P0A7K6 38538915
    822890 8htz:p (2.4) BS01 rna ? GO:0000027 ... P0A7L3 38538915
    822891 8htz:q (2.4) BS01 rna ? GO:0002181 ... P0AG48 38538915
    822892 8htz:r (2.4) BS01 rna ? GO:0002181 ... P61175 38538915
    822893 8htz:s (2.4) BS01 rna ? GO:0000027 ... P0ADZ0 38538915
    822894 8htz:t (2.4) BS01 rna ? GO:0000027 ... P60624 38538915
    822895 8htz:u (2.4) BS01 rna ? GO:0000027 ... P68919 38538915
    822896 8htz:v (2.4) BS01 rna ? GO:0000027 ... P0A7L8 38538915
    822897 8htz:v (2.4) BS02 rna ? GO:0000027 ... P0A7L8 38538915
    822898 8htz:w (2.4) BS01 rna ? GO:0000027 ... P0A7M2 38538915
    822899 8htz:x (2.4) BS01 rna ? GO:0000027 ... P0A7M6 38538915
    822900 8htz:y (2.4) BS01 rna ? GO:0000027 ... P0AG51 38538915
    822901 8htz:y (2.4) BS02 rna ? GO:0000027 ... P0AG51 38538915
    822902 8htz:z (2.4) BS01 rna ? GO:0000027 ... P0A7N4 38538915
    822903 8hu1:0 (2.69) BS01 rna ? GO:0000027 ... P0A7N9 38538915
    822904 8hu1:1 (2.69) BS01 rna ? GO:0002181 ... P0A7P5 38538915
    822905 8hu1:2 (2.69) BS01 rna ? GO:0002181 ... P0A7Q1 38538915
    822906 8hu1:3 (2.69) BS01 rna ? GO:0002181 ... P0A7Q6 38538915
    822907 8hu1:4 (2.69) BS01 rna ? GO:0002181 ... P0A7M9 38538915
    822908 8hu1:B (2.69) BS01 rna ? GO:0000028 ... P0A7V0 38538915
    822909 8hu1:C (2.69) BS01 rna ? GO:0000028 ... P0A7V3 38538915
    822910 8hu1:D (2.69) BS01 rna ? GO:0000028 ... P0A7V8 38538915
    822911 8hu1:E (2.69) BS01 rna ? GO:0000028 ... P0A7W1 38538915
    822912 8hu1:F (2.69) BS01 rna ? GO:0002181 ... P02358 38538915
    822913 8hu1:G (2.69) BS01 rna ? GO:0000028 ... P02359 38538915
    822914 8hu1:G (2.69) BS02 rna ? GO:0000028 ... P02359 38538915
    822915 8hu1:H (2.69) BS01 rna ? GO:0000028 ... P0A7W7 38538915
    822916 8hu1:I (2.69) BS01 rna ? GO:0000049 ... P0A7X3 38538915
    822917 8hu1:I (2.69) BS02 rna ? GO:0000049 ... P0A7X3 38538915
    822918 8hu1:J (2.69) BS01 rna ? GO:0000049 ... P0A7R5 38538915
    822919 8hu1:K (2.69) BS01 rna ? GO:0002181 ... P0A7R9 38538915
    822920 8hu1:L (2.69) BS01 rna ? GO:0000049 ... P0A7S3 38538915
    822921 8hu1:M (2.69) BS01 rna ? GO:0000049 ... P0A7S9 38538915
    822922 8hu1:M (2.69) BS02 rna ? GO:0000049 ... P0A7S9 38538915
    822923 8hu1:N (2.69) BS01 rna ? GO:0000028 ... P0AG59 38538915
    822924 8hu1:O (2.69) BS01 rna ? GO:0000028 ... P0ADZ4 38538915
    822925 8hu1:O (2.69) BS02 rna ? GO:0000028 ... P0ADZ4 38538915
    822926 8hu1:P (2.69) BS01 rna ? GO:0000028 ... P0A7T3 38538915
    822927 8hu1:Q (2.69) BS01 rna ? GO:0000028 ... P0AG63 38538915
    822928 8hu1:R (2.69) BS01 rna ? GO:0002181 ... P0A7T7 38538915
    822929 8hu1:S (2.69) BS01 rna ? GO:0000028 ... P0A7U3 38538915
    822930 8hu1:T (2.69) BS01 rna ? GO:0000028 ... P0A7U7 38538915
    822931 8hu1:U (2.69) BS01 rna ? GO:0000028 ... P68679 38538915
    822932 8hu1:c (2.69) BS01 rna ? GO:0000027 ... P60422 38538915
    822933 8hu1:d (2.69) BS01 rna ? GO:0000027 ... P60438 38538915
    822934 8hu1:e (2.69) BS01 rna ? GO:0001070 ... P60723 38538915
    822935 8hu1:f (2.69) BS01 rna ? GO:0000027 ... P62399 38538915
    822936 8hu1:f (2.69) BS02 rna ? GO:0000027 ... P62399 38538915
    822937 8hu1:f (2.69) BS03 rna ? GO:0000027 ... P62399 38538915
    822938 8hu1:g (2.69) BS01 rna ? GO:0000027 ... P0AG55 38538915
    822939 8hu1:h (2.69) BS01 rna ? GO:0002181 ... P0A7R1 38538915
    822940 8hu1:i (2.69) BS01 rna ? GO:0002181 ... P0AA10 38538915
    822941 8hu1:j (2.69) BS01 rna ? GO:0002181 ... P0ADY3 38538915
    822942 8hu1:j (2.69) BS02 rna ? GO:0002181 ... P0ADY3 38538915
    822943 8hu1:k (2.69) BS01 rna ? GO:0002181 ... P02413 38538915
    822944 8hu1:l (2.69) BS01 rna ? GO:0000027 ... P0ADY7 38538915
    822945 8hu1:l (2.69) BS02 rna ? GO:0000027 ... P0ADY7 38538915
    822946 8hu1:l (2.69) BS03 rna ? GO:0000027 ... P0ADY7 38538915
    822947 8hu1:m (2.69) BS01 rna ? GO:0000027 ... P0AG44 38538915
    822948 8hu1:n (2.69) BS01 rna ? GO:0002181 ... P0C018 38538915
    822949 8hu1:n (2.69) BS02 rna ? GO:0002181 ... P0C018 38538915
    822950 8hu1:o (2.69) BS01 rna ? GO:0000027 ... P0A7K6 38538915
    822951 8hu1:o (2.69) BS02 rna ? GO:0000027 ... P0A7K6 38538915
    822952 8hu1:p (2.69) BS01 rna ? GO:0000027 ... P0A7L3 38538915
    822953 8hu1:q (2.69) BS01 rna ? GO:0002181 ... P0AG48 38538915
    822954 8hu1:r (2.69) BS01 rna ? GO:0002181 ... P61175 38538915
    822955 8hu1:s (2.69) BS01 rna ? GO:0000027 ... P0ADZ0 38538915
    822956 8hu1:t (2.69) BS01 rna ? GO:0000027 ... P60624 38538915
    822957 8hu1:u (2.69) BS01 rna ? GO:0000027 ... P68919 38538915
    822958 8hu1:v (2.69) BS01 rna ? GO:0000027 ... P0A7L8 38538915
    822959 8hu1:v (2.69) BS02 rna ? GO:0000027 ... P0A7L8 38538915
    822960 8hu1:w (2.69) BS01 rna ? GO:0000027 ... P0A7M2 38538915
    822961 8hu1:x (2.69) BS01 rna ? GO:0000027 ... P0A7M6 38538915
    822962 8hu1:y (2.69) BS01 rna ? GO:0000027 ... P0AG51 38538915
    822963 8hu1:z (2.69) BS01 rna ? GO:0000027 ... P0A7N4 38538915
    822964 8hu2:A (1.6) BS01 M8R ? N/A Q9JI92 N/A
    822965 8hu6:A (2.33) BS01 ZN 3.5.4.6 GO:0003876 ... Q01433 36563792
    822966 8hu6:B (2.33) BS01 ZN 3.5.4.6 GO:0003876 ... Q01433 36563792
    822967 8hu6:C (2.33) BS01 ZN 3.5.4.6 GO:0003876 ... Q01433 36563792
    822968 8hu6:D (2.33) BS01 ZN 3.5.4.6 GO:0003876 ... Q01433 36563792
    822969 8hu6:D (2.33) BS02 AMP 3.5.4.6 GO:0003876 ... Q01433 36563792
    822970 8hua:A (2.12) BS01 CU 7.1.1.9 GO:0004129 ... Q5SJ79 37032973
    822971 8hua:A (2.12) BS02 HEM 7.1.1.9 GO:0004129 ... Q5SJ79 37032973
    822972 8hua:A (2.12) BS03 HAS 7.1.1.9 GO:0004129 ... Q5SJ79 37032973
    822973 8hua:B (2.12) BS01 CUA 7.1.1.9 GO:0004129 ... Q5SJ80 37032973
    822974 8hub:A (3.25) BS01 ZN 3.5.4.6 GO:0003876 ... Q01433 36563792
    822975 8hub:B (3.25) BS01 ZN 3.5.4.6 GO:0003876 ... Q01433 36563792
    822976 8hub:B (3.25) BS02 N4X 3.5.4.6 GO:0003876 ... Q01433 36563792
    822977 8hub:C (3.25) BS01 ZN 3.5.4.6 GO:0003876 ... Q01433 36563792
    822978 8hub:C (3.25) BS02 N4X 3.5.4.6 GO:0003876 ... Q01433 36563792
    822979 8hub:D (3.25) BS01 ZN 3.5.4.6 GO:0003876 ... Q01433 36563792
    822980 8hub:D (3.25) BS02 N4X 3.5.4.6 GO:0003876 ... Q01433 36563792
    822981 8hud:A (3.43) BS01 rna 3.1.-.- GO:0003676 ... A5Z395 38061052
    822982 8hud:A (3.43) BS02 dna 3.1.-.- GO:0003676 ... A5Z395 38061052
    822983 8hud:A (3.43) BS03 dna 3.1.-.- GO:0003676 ... A5Z395 38061052
    822984 8hue:A (1.48) BS01 GU4 N/A GO:0008083 ... P09038 39236042
    822985 8hue:B (1.48) BS01 GU4 N/A GO:0008083 ... P09038 39236042
    822986 8hue:B (1.48) BS02 YYJ N/A GO:0008083 ... P09038 39236042
    822987 8hue:C (1.48) BS01 YYJ N/A GO:0008083 ... P09038 39236042
    822988 8huf:A (2.29) BS01 MG 3.6.5.- GO:0000054 ... P62826 38105606
    822989 8huf:A (2.29) BS02 GTP 3.6.5.- GO:0000054 ... P62826 38105606
    822990 8huf:C (2.29) BS01 N5X ? GO:0000055 ... P30822 38105606
    822991 8hug:A (2.15) BS01 MG 3.6.5.- GO:0000054 ... P62826 38105606
    822992 8hug:A (2.15) BS02 GTP 3.6.5.- GO:0000054 ... P62826 38105606
    822993 8hug:C (2.15) BS01 N59 ? GO:0000055 ... P30822 38105606
    822994 8huh:A (2.8) BS01 GTP 3.6.5.- GO:0000226 ... P81947 N/A
    822995 8huh:A (2.8) BS02 CA 3.6.5.- GO:0000226 ... P81947 N/A
    822996 8huh:A (2.8) BS03 MXV 3.6.5.- GO:0000226 ... P81947 N/A
    822997 8huh:B (2.8) BS01 GDP ? GO:0000226 ... Q6B856 N/A
    822998 8huh:B (2.8) BS02 MXV ? GO:0000226 ... Q6B856 N/A
    822999 8huh:C (2.8) BS01 GTP 3.6.5.- GO:0000226 ... P81947 N/A
    823000 8huh:C (2.8) BS02 CA 3.6.5.- GO:0000226 ... P81947 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).