SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4107 4108 4109 4110 4111 4112 4113 4114 4115 4116 4117 4118 4119 4120 4121 4122 4123 4124 4125 4126 4127 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    823201 8h7n:A (1.99) BS01 WYW N/A N/A N/A 37428097
    823202 8h7o:A (1.55) BS01 CA 3.4.21.62 GO:0004252 ... N/A N/A
    823203 8h7p:A (1.82) BS01 peptide 3.4.21.62 GO:0004252 ... N/A N/A
    823204 8h7p:A (1.82) BS02 CA 3.4.21.62 GO:0004252 ... N/A N/A
    823205 8h7q:A (3.8) BS01 rna ? N/A A0ACD6B8S2 N/A
    823206 8h7q:A (3.8) BS02 dna ? N/A A0ACD6B8S2 N/A
    823207 8h7q:B (3.8) BS01 rna ? N/A A0ACD6B8S1 N/A
    823208 8h7q:C (3.8) BS01 rna ? N/A A0ACD6B8S1 N/A
    823209 8h7q:C (3.8) BS02 dna ? N/A A0ACD6B8S1 N/A
    823210 8h7q:E (3.8) BS01 rna ? N/A A0ACD6B8S1 N/A
    823211 8h7q:E (3.8) BS02 dna ? N/A A0ACD6B8S1 N/A
    823212 8h7q:F (3.8) BS01 rna ? N/A A0ACD6B8S1 N/A
    823213 8h7q:F (3.8) BS02 dna ? N/A A0ACD6B8S1 N/A
    823214 8h7q:G (3.8) BS01 rna ? N/A A0ACD6B8S1 N/A
    823215 8h7q:G (3.8) BS02 dna ? N/A A0ACD6B8S1 N/A
    823216 8h7q:H (3.8) BS01 rna ? N/A A0ACD6B8S1 N/A
    823217 8h7q:H (3.8) BS02 dna ? N/A A0ACD6B8S1 N/A
    823218 8h7q:I (3.8) BS01 rna ? N/A A0ACD6B8S1 N/A
    823219 8h7q:I (3.8) BS02 dna ? N/A A0ACD6B8S1 N/A
    823220 8h7q:K (3.8) BS01 dna ? N/A A0ACD6B8S0 N/A
    823221 8h7q:K (3.8) BS02 dna ? N/A A0ACD6B8S0 N/A
    823222 8h7q:N (3.8) BS01 dna ? N/A A0ACD6B8S0 N/A
    823223 8h7q:O (3.8) BS01 dna ? N/A A0ACD6B8S0 N/A
    823224 8h7r:A (2.0) BS01 WZ0 N/A N/A N/A 37428097
    823225 8h7v:A (1.97) BS01 AKG ? GO:0005506 ... S5TUM1 36974966
    823226 8h7v:A (1.97) BS02 FE ? GO:0005506 ... S5TUM1 36974966
    823227 8h7v:B (1.97) BS01 AKG ? GO:0005506 ... S5TUM1 36974966
    823228 8h7v:B (1.97) BS02 FE ? GO:0005506 ... S5TUM1 36974966
    823229 8h7w:A (1.6) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37696289
    823230 8h7x:A (3.404) BS01 6GY 2.7.10.1 GO:0004672 ... P00533 38396251
    823231 8h7y:A (2.14) BS01 FE ? GO:0005506 ... S5TUM1 36974966
    823232 8h7y:A (2.14) BS02 AKG ? GO:0005506 ... S5TUM1 36974966
    823233 8h7y:A (2.14) BS03 PRO ? GO:0005506 ... S5TUM1 36974966
    823234 8h7y:B (2.14) BS01 FE ? GO:0005506 ... S5TUM1 36974966
    823235 8h7y:B (2.14) BS02 AKG ? GO:0005506 ... S5TUM1 36974966
    823236 8h7y:B (2.14) BS03 PRO ? GO:0005506 ... S5TUM1 36974966
    823237 8h81:A (1.84) BS01 HYP ? GO:0005506 ... S5TUM1 36974966
    823238 8h82:A (1.93) BS01 4WI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37696289
    823239 8h85:A (2.38) BS01 HY3 ? GO:0005506 ... S5TUM1 36974966
    823240 8h86:A (2.56) BS01 RET N/A GO:0016020 ... N/A 37652010
    823241 8h87:A (2.53) BS01 RET N/A GO:0016020 ... N/A 37652010
    823242 8h8e:B (3.81) BS01 rna ? GO:0005886 ... Q0V9Z3 38942816
    823243 8h8e:C (3.81) BS01 rna ? GO:0005886 ... Q0V9Z3 38942816
    823244 8h8e:D (3.81) BS01 rna ? GO:0005886 ... Q0V9Z3 38942816
    823245 8h8e:E (3.81) BS01 rna ? GO:0005886 ... Q0V9Z3 38942816
    823246 8h8e:F (3.81) BS01 rna ? GO:0005886 ... Q0V9Z3 38942816
    823247 8h8i:A (2.03) BS01 KZO N/A N/A N/A 37749089
    823248 8h8j:C (3.2) BS01 WYB ? GO:0002548 ... Q9HC97 36543774
    823249 8h8j:C (3.2) BS02 CLR ? GO:0002548 ... Q9HC97 36543774
    823250 8h8j:C (3.2) BS03 CLR ? GO:0002548 ... Q9HC97 36543774
    823251 8h8q:H (2.5) BS01 peptide N/A N/A N/A 40120343
    823252 8h8q:L (2.5) BS01 peptide N/A N/A N/A 40120343
    823253 8h8r:A (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    823254 8h8r:A (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    823255 8h8r:A (1.7) BS03 CU 7.1.1.9 GO:0004129 ... P00396 36708913
    823256 8h8r:A (1.7) BS04 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    823257 8h8r:A (1.7) BS05 CA 7.1.1.9 GO:0004129 ... P00396 36708913
    823258 8h8r:A (1.7) BS06 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823259 8h8r:A (1.7) BS07 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823260 8h8r:A (1.7) BS08 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823261 8h8r:B (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 36708913
    823262 8h8r:B (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    823263 8h8r:B (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P68530 36708913
    823264 8h8r:B (1.7) BS04 DMU 7.1.1.9 GO:0004129 ... P68530 36708913
    823265 8h8r:C (1.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823266 8h8r:C (1.7) BS02 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823267 8h8r:C (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823268 8h8r:C (1.7) BS04 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823269 8h8r:C (1.7) BS05 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823270 8h8r:D (1.7) BS01 DMU ? GO:0006123 ... P00423 36708913
    823271 8h8r:F (1.7) BS01 ZN ? GO:0005740 ... P00428 36708913
    823272 8h8r:H (1.7) BS01 DMU ? GO:0005739 ... P00429 36708913
    823273 8h8r:J (1.7) BS01 DMU ? GO:0006123 ... P07470 36708913
    823274 8h8r:J (1.7) BS02 DMU ? GO:0006123 ... P07470 36708913
    823275 8h8r:L (1.7) BS01 DMU ? GO:0006123 ... P00430 36708913
    823276 8h8r:M (1.7) BS01 DMU ? GO:0006123 ... P10175 36708913
    823277 8h8r:M (1.7) BS02 DMU ? GO:0006123 ... P10175 36708913
    823278 8h8r:N (1.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823279 8h8r:N (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    823280 8h8r:N (1.7) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    823281 8h8r:N (1.7) BS04 CU 7.1.1.9 GO:0004129 ... P00396 36708913
    823282 8h8r:N (1.7) BS05 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    823283 8h8r:N (1.7) BS06 CA 7.1.1.9 GO:0004129 ... P00396 36708913
    823284 8h8r:N (1.7) BS07 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823285 8h8r:N (1.7) BS08 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823286 8h8r:O (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 36708913
    823287 8h8r:O (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    823288 8h8r:O (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P68530 36708913
    823289 8h8r:P (1.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823290 8h8r:P (1.7) BS02 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823291 8h8r:P (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823292 8h8r:P (1.7) BS04 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823293 8h8r:Q (1.7) BS01 DMU ? GO:0006123 ... P00423 36708913
    823294 8h8r:S (1.7) BS01 ZN ? GO:0005740 ... P00428 36708913
    823295 8h8r:U (1.7) BS01 DMU ? GO:0005739 ... P00429 36708913
    823296 8h8r:W (1.7) BS01 DMU ? GO:0006123 ... P07470 36708913
    823297 8h8r:W (1.7) BS02 DMU ? GO:0006123 ... P07470 36708913
    823298 8h8r:Z (1.7) BS01 DMU ? GO:0006123 ... P10175 36708913
    823299 8h8r:Z (1.7) BS02 DMU ? GO:0006123 ... P10175 36708913
    823300 8h8s:A (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    823301 8h8s:A (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    823302 8h8s:A (1.7) BS03 CU 7.1.1.9 GO:0004129 ... P00396 36708913
    823303 8h8s:A (1.7) BS04 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    823304 8h8s:A (1.7) BS05 CA 7.1.1.9 GO:0004129 ... P00396 36708913
    823305 8h8s:A (1.7) BS06 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823306 8h8s:A (1.7) BS07 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823307 8h8s:A (1.7) BS08 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823308 8h8s:B (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 36708913
    823309 8h8s:B (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    823310 8h8s:B (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P68530 36708913
    823311 8h8s:B (1.7) BS04 DMU 7.1.1.9 GO:0004129 ... P68530 36708913
    823312 8h8s:C (1.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823313 8h8s:C (1.7) BS02 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823314 8h8s:C (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823315 8h8s:C (1.7) BS04 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823316 8h8s:C (1.7) BS05 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823317 8h8s:D (1.7) BS01 DMU ? GO:0006123 ... P00423 36708913
    823318 8h8s:F (1.7) BS01 ZN ? GO:0005740 ... P00428 36708913
    823319 8h8s:G (1.7) BS01 DMU ? GO:0005743 ... P07471 36708913
    823320 8h8s:H (1.7) BS01 DMU ? GO:0005739 ... P00429 36708913
    823321 8h8s:J (1.7) BS01 DMU ? GO:0006123 ... P07470 36708913
    823322 8h8s:J (1.7) BS02 DMU ? GO:0006123 ... P07470 36708913
    823323 8h8s:L (1.7) BS01 DMU ? GO:0006123 ... P00430 36708913
    823324 8h8s:M (1.7) BS01 DMU ? GO:0006123 ... P10175 36708913
    823325 8h8s:M (1.7) BS02 DMU ? GO:0006123 ... P10175 36708913
    823326 8h8s:N (1.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823327 8h8s:N (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    823328 8h8s:N (1.7) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    823329 8h8s:N (1.7) BS04 CU 7.1.1.9 GO:0004129 ... P00396 36708913
    823330 8h8s:N (1.7) BS05 MG 7.1.1.9 GO:0004129 ... P00396 36708913
    823331 8h8s:N (1.7) BS06 CA 7.1.1.9 GO:0004129 ... P00396 36708913
    823332 8h8s:N (1.7) BS07 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823333 8h8s:N (1.7) BS08 DMU 7.1.1.9 GO:0004129 ... P00396 36708913
    823334 8h8s:O (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 36708913
    823335 8h8s:O (1.7) BS02 CUA 7.1.1.9 GO:0004129 ... P68530 36708913
    823336 8h8s:O (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P68530 36708913
    823337 8h8s:P (1.7) BS01 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823338 8h8s:P (1.7) BS02 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823339 8h8s:P (1.7) BS03 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823340 8h8s:P (1.7) BS04 DMU 7.1.1.9 GO:0004129 ... P00415 36708913
    823341 8h8s:Q (1.7) BS01 DMU ? GO:0006123 ... P00423 36708913
    823342 8h8s:S (1.7) BS01 ZN ? GO:0005740 ... P00428 36708913
    823343 8h8s:T (1.7) BS01 DMU ? GO:0005743 ... P07471 36708913
    823344 8h8s:U (1.7) BS01 DMU ? GO:0005739 ... P00429 36708913
    823345 8h8s:W (1.7) BS01 DMU ? GO:0006123 ... P07470 36708913
    823346 8h8s:W (1.7) BS02 DMU ? GO:0006123 ... P07470 36708913
    823347 8h8s:Y (1.7) BS01 DMU ? GO:0006123 ... P00430 36708913
    823348 8h8s:Z (1.7) BS01 DMU ? GO:0006123 ... P10175 36708913
    823349 8h92:A (2.6) BS01 MG ? GO:0016462 ... A0A6P3ZKP6 N/A
    823350 8h92:B (2.6) BS01 MG ? GO:0016462 ... A0A6P3ZKP6 N/A
    823351 8h97:A (2.194) BS01 CA 3.2.1.81 N/A A0A516RTC5 36746585
    823352 8h97:A (2.194) BS02 CA 3.2.1.81 N/A A0A516RTC5 36746585
    823353 8h98:A (2.5) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823354 8h98:A (2.5) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823355 8h98:B (2.5) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823356 8h98:B (2.5) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823357 8h99:A (1.94) BS01 ATP 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823358 8h99:A (1.94) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823359 8h99:B (1.94) BS01 ATP 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823360 8h99:B (1.94) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823361 8h9a:A (1.9) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823362 8h9a:A (1.9) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823363 8h9b:A (2.23) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823364 8h9b:A (2.23) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823365 8h9c:A (2.15) BS01 X5V 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823366 8h9c:A (2.15) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 36707692
    823367 8h9d:A (3.1) BS01 rna N/A N/A N/A 36917574
    823368 8h9e:A (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    823369 8h9e:B (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    823370 8h9e:C (2.53) BS01 ATP ? GO:0001937 ... P25705 37244256
    823371 8h9e:D (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    823372 8h9e:E (2.53) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    823373 8h9e:F (2.53) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    823374 8h9h:G (2.2) BS01 dna ? N/A O95365 37013936
    823375 8h9h:G (2.2) BS02 dna ? N/A O95365 37013936
    823376 8h9h:G (2.2) BS03 peptide ? N/A O95365 37013936
    823377 8h9h:G (2.2) BS04 ZN ? N/A O95365 37013936
    823378 8h9h:G (2.2) BS05 ZN ? N/A O95365 37013936
    823379 8h9h:G (2.2) BS06 ZN ? N/A O95365 37013936
    823380 8h9i:A (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    823381 8h9i:B (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    823382 8h9i:B (2.77) BS02 MG ? GO:0001937 ... P25705 37244256
    823383 8h9i:C (2.77) BS01 ATP ? GO:0001937 ... P25705 37244256
    823384 8h9i:D (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    823385 8h9i:E (2.77) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    823386 8h9i:F (2.77) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    823387 8h9i:F (2.77) BS02 MG 7.1.2.2 GO:0001525 ... P06576 37244256
    823388 8h9l:A (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    823389 8h9l:B (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    823390 8h9l:C (2.61) BS01 ATP ? GO:0001937 ... P25705 37244256
    823391 8h9l:D (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    823392 8h9l:D (2.61) BS02 MG 7.1.2.2 GO:0001525 ... P06576 37244256
    823393 8h9l:E (2.61) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 37244256
    823394 8h9l:F (2.61) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 37244256
    823395 8h9p:A (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    823396 8h9p:B (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    823397 8h9p:B (3.02) BS02 MG ? GO:0001937 ... P25705 37244256
    823398 8h9p:B (3.02) BS03 ADP ? GO:0001937 ... P25705 37244256
    823399 8h9p:C (3.02) BS01 ATP ? GO:0001937 ... P25705 37244256
    823400 8h9p:C (3.02) BS02 MG ? GO:0001937 ... P25705 37244256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).