SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    823601 8hay:A (2.74) BS01 KYL N/A GO:0006508 ... N/A 37535747
    823602 8hay:B (2.74) BS01 KYL N/A GO:0006508 ... N/A 37535747
    823603 8hay:C (2.74) BS01 KYL N/A GO:0006508 ... N/A 37535747
    823604 8hb0:A (2.9) BS01 peptide ? GO:0000017 ... P31639 38057552
    823605 8hb0:A (2.9) BS02 KZ3 ? GO:0000017 ... P31639 38057552
    823606 8hb0:A (2.9) BS03 NA ? GO:0000017 ... P31639 38057552
    823607 8hb2:A (3.06) BS01 MN 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823608 8hb2:B (3.06) BS01 MN 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823609 8hb2:B (3.06) BS02 AKG 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823610 8hb2:C (3.06) BS01 MN 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823611 8hb2:C (3.06) BS02 AKG 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823612 8hb2:D (3.06) BS01 MN 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823613 8hb5:A (2.6) BS01 CA ? N/A E1BHM0 37521780
    823614 8hb5:A (2.6) BS02 CA ? N/A E1BHM0 37521780
    823615 8hb5:A (2.6) BS03 CA ? N/A E1BHM0 37521780
    823616 8hb5:A (2.6) BS04 L6N ? N/A E1BHM0 37521780
    823617 8hb9:AAA (2.8) BS01 R1R 1.1.1.42 GO:0000287 ... O75874 37209613
    823618 8hb9:AAA (2.8) BS02 NDP 1.1.1.42 GO:0000287 ... O75874 37209613
    823619 8hb9:BBB (2.8) BS01 R1R 1.1.1.42 GO:0000287 ... O75874 37209613
    823620 8hb9:BBB (2.8) BS02 NDP 1.1.1.42 GO:0000287 ... O75874 37209613
    823621 8hb9:CCC (2.8) BS01 R1R 1.1.1.42 GO:0000287 ... O75874 37209613
    823622 8hb9:CCC (2.8) BS02 NDP 1.1.1.42 GO:0000287 ... O75874 37209613
    823623 8hb9:DDD (2.8) BS01 R1R 1.1.1.42 GO:0000287 ... O75874 37209613
    823624 8hb9:DDD (2.8) BS02 NDP 1.1.1.42 GO:0000287 ... O75874 37209613
    823625 8hbb:A (3.09) BS01 MN 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823626 8hbb:B (3.09) BS01 MN 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823627 8hbb:C (3.09) BS01 MN 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823628 8hbb:D (3.09) BS01 MN 1.14.11.51 GO:0005515 ... Q8MNT9 38255759
    823629 8hbd:R (2.99) BS01 peptide 1.13.12.13 GO:0000122 ... P24530 36882417
    823630 8hbe:B (3.2) BS01 HEM 4.6.1.2 GO:0004016 ... Q02153 36972843
    823631 8hbf:A (3.1) BS01 G2P 4.6.1.2 GO:0004383 ... Q02108 36972843
    823632 8hbf:A (3.1) BS02 MG 4.6.1.2 GO:0004383 ... Q02108 36972843
    823633 8hbf:A (3.1) BS03 MG 4.6.1.2 GO:0004383 ... Q02108 36972843
    823634 8hbf:A (3.1) BS04 GZO 4.6.1.2 GO:0004383 ... Q02108 36972843
    823635 8hbf:B (3.1) BS01 G2P 4.6.1.2 GO:0004016 ... Q02153 36972843
    823636 8hbf:B (3.1) BS02 HEM 4.6.1.2 GO:0004016 ... Q02153 36972843
    823637 8hbf:B (3.1) BS03 GZO 4.6.1.2 GO:0004016 ... Q02153 36972843
    823638 8hbh:A (3.1) BS01 MG 4.6.1.2 GO:0004383 ... Q02108 36972843
    823639 8hbh:A (3.1) BS02 MG 4.6.1.2 GO:0004383 ... Q02108 36972843
    823640 8hbh:A (3.1) BS03 G2P 4.6.1.2 GO:0004383 ... Q02108 36972843
    823641 8hbh:B (3.1) BS01 G2P 4.6.1.2 GO:0004016 ... Q02153 36972843
    823642 8hbh:B (3.1) BS02 HEM 4.6.1.2 GO:0004016 ... Q02153 36972843
    823643 8hbk:A (1.8) BS01 7YY 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37696289
    823644 8hbm:A (3.3) BS01 dna ? GO:0003700 ... P19793 37287811
    823645 8hbm:A (3.3) BS02 dna ? GO:0003700 ... P19793 37287811
    823646 8hbm:A (3.3) BS03 ZN ? GO:0003700 ... P19793 37287811
    823647 8hbm:A (3.3) BS04 ZN ? GO:0003700 ... P19793 37287811
    823648 8hbm:B (3.3) BS01 dna ? GO:0003700 ... Q96RI1 37287811
    823649 8hbm:B (3.3) BS02 dna ? GO:0003700 ... Q96RI1 37287811
    823650 8hbm:B (3.3) BS03 ZN ? GO:0003700 ... Q96RI1 37287811
    823651 8hbm:B (3.3) BS04 ZN ? GO:0003700 ... Q96RI1 37287811
    823652 8hbm:E (3.3) BS01 dna ? GO:0003700 ... P19793 37287811
    823653 8hbm:E (3.3) BS02 dna ? GO:0003700 ... P19793 37287811
    823654 8hbm:E (3.3) BS03 ZN ? GO:0003700 ... P19793 37287811
    823655 8hbm:E (3.3) BS04 ZN ? GO:0003700 ... P19793 37287811
    823656 8hbm:F (3.3) BS01 dna ? GO:0003700 ... Q96RI1 37287811
    823657 8hbm:F (3.3) BS02 dna ? GO:0003700 ... Q96RI1 37287811
    823658 8hbm:F (3.3) BS03 ZN ? GO:0003700 ... Q96RI1 37287811
    823659 8hbm:F (3.3) BS04 ZN ? GO:0003700 ... Q96RI1 37287811
    823660 8hbt:A (1.96) BS01 KZO N/A N/A N/A 37749089
    823661 8hbw:A (2.57) BS01 ATP ? GO:0002024 ... P25874 37336486
    823662 8hc0:A (2.9) BS01 peptide ? N/A Q5T601 36716818
    823663 8hc0:A (2.9) BS02 MAN ? N/A Q5T601 36716818
    823664 8hcc:A (2.0) BS01 AMP 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823665 8hcc:A (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823666 8hcc:B (2.0) BS01 AMP 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823667 8hcc:B (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823668 8hcc:C (2.0) BS01 AMP 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823669 8hcc:C (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823670 8hcc:D (2.0) BS01 AMP 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823671 8hcc:D (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823672 8hcd:B (2.0) BS01 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823673 8hcd:B (2.0) BS02 DCM 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823674 8hcd:C (2.0) BS01 DGP 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823675 8hcd:C (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823676 8hcd:D (2.0) BS01 DCM 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823677 8hcd:D (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823678 8hcd:E (2.0) BS01 DCM 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823679 8hcd:E (2.0) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823680 8hcd:E (2.0) BS03 CO 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823681 8hce:B (1.501) BS01 C5P 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823682 8hcf:B (1.6) BS01 U5P 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823683 8hcg:A (1.799) BS01 D5M 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823684 8hcg:A (1.799) BS02 MG 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823685 8hch:A (2.0) BS01 URI 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823686 8hch:B (2.0) BS01 URI 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823687 8hch:C (2.0) BS01 URI 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823688 8hch:D (2.0) BS01 URI 3.1.11.2 GO:0003676 ... Q91XB0 37870446
    823689 8hcj:A (2.566) BS01 CA 3.2.1.37 GO:0004553 ... F0S5E9 39708861
    823690 8hcj:B (2.566) BS01 CA 3.2.1.37 GO:0004553 ... F0S5E9 39708861
    823691 8hcj:C (2.566) BS01 CA 3.2.1.37 GO:0004553 ... F0S5E9 39708861
    823692 8hcj:D (2.566) BS01 CA 3.2.1.37 GO:0004553 ... F0S5E9 39708861
    823693 8hcj:E (2.566) BS01 CA 3.2.1.37 GO:0004553 ... F0S5E9 39708861
    823694 8hcj:F (2.566) BS01 CA 3.2.1.37 GO:0004553 ... F0S5E9 39708861
    823695 8hcj:G (2.566) BS01 CA 3.2.1.37 GO:0004553 ... F0S5E9 39708861
    823696 8hcj:H (2.566) BS01 CA 3.2.1.37 GO:0004553 ... F0S5E9 39708861
    823697 8hck:A (2.0) BS01 P1Z ? N/A O00560 36834839
    823698 8hcl:A (1.99) BS01 dna ? GO:0000976 ... A8E5I1 39058321
    823699 8hcl:A (1.99) BS02 dna ? GO:0000976 ... A8E5I1 39058321
    823700 8hcl:B (1.99) BS01 dna ? GO:0000976 ... A8E5I1 39058321
    823701 8hcl:B (1.99) BS02 dna ? GO:0000976 ... A8E5I1 39058321
    823702 8hcm:A (2.59) BS01 dna ? GO:0000976 ... Q1RLP9 39058321
    823703 8hcm:A (2.59) BS02 dna ? GO:0000976 ... Q1RLP9 39058321
    823704 8hcq:R (3.01) BS01 peptide 1.13.12.13 GO:0004930 ... Q9GV45 36882417
    823705 8hcr:A (4.5) BS01 FES ? GO:0004497 ... P9WH23 37158740
    823706 8hcr:B (4.5) BS01 HEM 7.1.1.8 GO:0005886 ... P9WP37 37158740
    823707 8hcr:B (4.5) BS02 HEM 7.1.1.8 GO:0005886 ... P9WP37 37158740
    823708 8hcr:C (4.5) BS01 HEC 7.1.1.8 GO:0004129 ... P9WP35 37158740
    823709 8hcr:C (4.5) BS02 HEC 7.1.1.8 GO:0004129 ... P9WP35 37158740
    823710 8hcr:F (4.5) BS01 HEA 7.1.1.9 GO:0004129 ... P9WP71 37158740
    823711 8hcr:F (4.5) BS02 HEA 7.1.1.9 GO:0004129 ... P9WP71 37158740
    823712 8hcr:M (4.5) BS01 FES ? GO:0004497 ... P9WH23 37158740
    823713 8hcr:N (4.5) BS01 HEM 7.1.1.8 GO:0005886 ... P9WP37 37158740
    823714 8hcr:N (4.5) BS02 HEM 7.1.1.8 GO:0005886 ... P9WP37 37158740
    823715 8hcr:O (4.5) BS01 HEC 7.1.1.8 GO:0004129 ... P9WP35 37158740
    823716 8hcr:O (4.5) BS02 HEC 7.1.1.8 GO:0004129 ... P9WP35 37158740
    823717 8hcr:R (4.5) BS01 HEA 7.1.1.9 GO:0004129 ... P9WP71 37158740
    823718 8hcr:R (4.5) BS02 HEA 7.1.1.9 GO:0004129 ... P9WP71 37158740
    823719 8hct:A (2.26) BS01 FE 1.16.3.1 GO:0004322 ... A0A8F4Y4C2 36904538
    823720 8hct:A (2.26) BS02 FE 1.16.3.1 GO:0004322 ... A0A8F4Y4C2 36904538
    823721 8hct:A (2.26) BS03 CU 1.16.3.1 GO:0004322 ... A0A8F4Y4C2 36904538
    823722 8hcx:C (3.5) BS01 peptide 1.13.12.13 GO:0004930 ... Q9GV45 36882417
    823723 8hd0:A (3.11) BS01 ATP ? GO:0000917 ... P0A9R7 N/A
    823724 8hd0:A (3.11) BS02 ATP ? GO:0000917 ... P0A9R7 N/A
    823725 8hd0:B (3.11) BS01 ATP ? GO:0000917 ... P0A9R7 N/A
    823726 8hd0:B (3.11) BS02 ATP ? GO:0000917 ... P0A9R7 N/A
    823727 8hd2:A (1.6) BS01 SAH ? N/A A0A0M2USF2 36614187
    823728 8hd3:A (2.29) BS01 XAW ? GO:0004879 ... Q96RI1 N/A
    823729 8hd3:B (2.29) BS01 XAW ? GO:0004879 ... Q96RI1 N/A
    823730 8hd4:A (2.68) BS01 1TF 6.2.1.57 GO:0006633 ... P9WQ47 36896429
    823731 8hd8:A (2.4) BS01 CA 3.4.21.122 GO:0016020 ... O15393 37990007
    823732 8hd8:B (2.4) BS01 CA 3.4.21.122 GO:0016020 ... O15393 37990007
    823733 8hd8:C (2.4) BS01 GBS 3.4.21.122 GO:0004252 ... O15393 37990007
    823734 8hd8:D (2.4) BS01 GBS 3.4.21.122 GO:0004252 ... O15393 37990007
    823735 8hdd:A (3.0) BS01 FAD 1.1.5.9 GO:0016614 ... Q8GQE7 36473944
    823736 8hdd:A (3.0) BS02 F3S 1.1.5.9 GO:0016614 ... Q8GQE7 36473944
    823737 8hdd:B (3.0) BS01 HEM ? GO:0005506 ... Q71JE9 36473944
    823738 8hdf:A (2.24) BS01 PLM 6.2.1.57 GO:0006633 ... P9WQ47 36896429
    823739 8hdf:A (2.24) BS02 ANP 6.2.1.57 GO:0006633 ... P9WQ47 36896429
    823740 8hdg:A (1.73) BS01 NUT ? GO:0005634 ... O15151 N/A
    823741 8hdg:A (1.73) BS02 O4B ? GO:0005634 ... O15151 N/A
    823742 8hdg:B (1.73) BS01 NUT ? GO:0005634 ... O15151 N/A
    823743 8hdg:C (1.73) BS01 NUT ? GO:0005634 ... O15151 N/A
    823744 8hdg:C (1.73) BS02 NUT ? GO:0005634 ... O15151 N/A
    823745 8hdg:D (1.73) BS01 NUT ? GO:0005634 ... O15151 N/A
    823746 8hdg:D (1.73) BS02 O4B ? GO:0005634 ... O15151 N/A
    823747 8hdg:D (1.73) BS03 O4B ? GO:0005634 ... O15151 N/A
    823748 8hdh:A (3.1) BS01 peptide ? GO:0000017 ... P31639 38057552
    823749 8hdh:A (3.1) BS02 L3R ? GO:0000017 ... P31639 38057552
    823750 8hdh:A (3.1) BS03 NA ? GO:0000017 ... P31639 38057552
    823751 8hdj:B (1.85) BS01 peptide ? N/A A3DC27 37418529
    823752 8hdj:D (1.85) BS01 peptide ? N/A A3DC27 37418529
    823753 8hdj:F (1.85) BS01 peptide ? N/A A3DC27 37418529
    823754 8hdj:H (1.85) BS01 peptide ? N/A A3DC27 37418529
    823755 8hdo:R (2.87) BS01 CLR ? GO:0001609 ... P29275 36575181
    823756 8hdo:R (2.87) BS02 CLR ? GO:0001609 ... P29275 36575181
    823757 8hdo:R (2.87) BS03 CLR ? GO:0001609 ... P29275 36575181
    823758 8hdo:R (2.87) BS04 CLR ? GO:0001609 ... P29275 36575181
    823759 8hdo:R (2.87) BS05 CLR ? GO:0001609 ... P29275 36575181
    823760 8hdo:R (2.87) BS06 CLR ? GO:0001609 ... P29275 36575181
    823761 8hdo:R (2.87) BS07 CLR ? GO:0001609 ... P29275 36575181
    823762 8hdo:R (2.87) BS08 I5D ? GO:0001609 ... P29275 36575181
    823763 8hdp:R (3.2) BS01 ADN ? GO:0001609 ... P29275 36575181
    823764 8hdp:R (3.2) BS02 CLR ? GO:0001609 ... P29275 36575181
    823765 8hdp:R (3.2) BS03 CLR ? GO:0001609 ... P29275 36575181
    823766 8hdp:R (3.2) BS04 CLR ? GO:0001609 ... P29275 36575181
    823767 8hdp:R (3.2) BS05 CLR ? GO:0001609 ... P29275 36575181
    823768 8he0:A (1.8) BS01 peptide ? N/A P52293 36806083
    823769 8he1:A (1.61) BS01 ZN 3.5.1.41 GO:0005975 ... A0A2S4W2W0 37385996
    823770 8he1:A (1.61) BS02 BHO 3.5.1.41 GO:0005975 ... A0A2S4W2W0 37385996
    823771 8he2:A (1.61) BS01 LMI 3.5.1.41 GO:0005975 ... A0A2S4W2W0 37385996
    823772 8he2:A (1.61) BS02 ZN 3.5.1.41 GO:0005975 ... A0A2S4W2W0 37385996
    823773 8he3:A (1.9) BS01 peptide ? N/A P52293 36806083
    823774 8he4:A (1.93) BS01 ZN 3.5.1.41 GO:0005975 ... A0A2S4W2W0 37385996
    823775 8he4:A (1.93) BS02 8GK 3.5.1.41 GO:0005975 ... A0A2S4W2W0 37385996
    823776 8he5:A (6.95) BS01 dna 2.7.7.6 GO:0000785 ... C4R4Y0 37120012
    823777 8he5:A (6.95) BS02 rna 2.7.7.6 GO:0000785 ... C4R4Y0 37120012
    823778 8he5:A (6.95) BS03 dna 2.7.7.6 GO:0000785 ... C4R4Y0 37120012
    823779 8he5:A (6.95) BS04 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 37120012
    823780 8he5:A (6.95) BS05 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 37120012
    823781 8he5:A (6.95) BS06 MG 2.7.7.6 GO:0000785 ... C4R4Y0 37120012
    823782 8he5:B (6.95) BS01 rna 2.7.7.6 GO:0001172 ... C4QZQ7 37120012
    823783 8he5:B (6.95) BS02 dna 2.7.7.6 GO:0001172 ... C4QZQ7 37120012
    823784 8he5:B (6.95) BS03 ZN 2.7.7.6 GO:0001172 ... C4QZQ7 37120012
    823785 8he5:C (6.95) BS01 ZN ? GO:0000428 ... C4R7L2 37120012
    823786 8he5:E (6.95) BS01 dna ? GO:0001172 ... C4R3P8 37120012
    823787 8he5:I (6.95) BS01 ZN ? GO:0001172 ... C4QY79 37120012
    823788 8he5:I (6.95) BS02 ZN ? GO:0001172 ... C4QY79 37120012
    823789 8he5:J (6.95) BS01 ZN ? GO:0003677 ... C4R009 37120012
    823790 8he5:L (6.95) BS01 ZN ? GO:0003677 ... F2QMI1 37120012
    823791 8he5:M (6.95) BS01 dna ? GO:0000993 ... C4QZ45 37120012
    823792 8he5:M (6.95) BS02 ZN ? GO:0000993 ... C4QZ45 37120012
    823793 8he5:O (6.95) BS01 dna ? GO:0000785 ... C4R198 37120012
    823794 8he5:O (6.95) BS02 dna ? GO:0000785 ... C4R198 37120012
    823795 8he5:a (6.95) BS01 dna ? GO:0000786 ... P68431 37120012
    823796 8he5:a (6.95) BS02 dna ? GO:0000786 ... P68431 37120012
    823797 8he5:b (6.95) BS01 dna ? GO:0000781 ... P62805 37120012
    823798 8he5:b (6.95) BS02 dna ? GO:0000781 ... P62805 37120012
    823799 8he5:c (6.95) BS01 dna ? GO:0000786 ... P04908 37120012
    823800 8he5:c (6.95) BS02 dna ? GO:0000786 ... P04908 37120012

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).