SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    824201 8i10:B (3.96) BS01 peptide ? GO:0000822 ... P32120 37209686
    824202 8i10:C (3.96) BS01 peptide ? GO:0000822 ... P32120 37209686
    824203 8i10:E (3.96) BS01 peptide N/A N/A N/A 37209686
    824204 8i11:A (1.855) BS01 FMN 2.7.11.1 N/A A0A1Y1HNG4 39344087
    824205 8i15:A (2.19) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    824206 8i15:A (2.19) BS02 O7C 1.13.11.27 GO:0003868 ... P93836 N/A
    824207 8i16:A (2.24) BS01 ZN ? GO:0003677 ... A0A7C2YU39 37729124
    824208 8i16:A (2.24) BS02 ZN ? GO:0003677 ... A0A7C2YU39 37729124
    824209 8i17:B (1.98) BS01 peptide ? GO:0000786 ... P06899 36801613
    824210 8i17:B (1.98) BS02 peptide ? GO:0000786 ... P06899 36801613
    824211 8i17:E (1.98) BS01 peptide ? GO:0000786 ... P06899 36801613
    824212 8i17:E (1.98) BS02 peptide ? GO:0000786 ... P06899 36801613
    824213 8i17:H (1.98) BS01 peptide ? GO:0000786 ... P06899 36801613
    824214 8i18:A (1.1) BS01 8DG 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824215 8i18:B (1.1) BS01 8DG 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824216 8i19:A (1.48) BS01 8DG 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824217 8i19:B (1.48) BS01 8DG 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824218 8i1a:A (1.4) BS01 8DG 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824219 8i1a:B (1.4) BS01 8DG 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824220 8i1d:A (1.2) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824221 8i1d:B (1.2) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824222 8i1e:A (1.1) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824223 8i1e:B (1.1) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824224 8i1f:A (1.05) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824225 8i1f:B (1.05) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824226 8i1g:A (1.18) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824227 8i1i:A (1.2) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824228 8i1i:B (1.2) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824229 8i1j:A (1.08) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824230 8i1j:B (1.08) BS01 6U4 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 36914375
    824231 8i1m:A (1.699) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O43252 37207644
    824232 8i1m:A (1.699) BS02 ADX 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O43252 37207644
    824233 8i1n:A (2.8) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824234 8i1n:B (2.8) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824235 8i1n:B (2.8) BS02 ADX 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824236 8i1n:C (2.8) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824237 8i1n:C (2.8) BS02 ADX 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824238 8i1n:D (2.8) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824239 8i1o:A (2.4) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824240 8i1o:A (2.4) BS02 ADX 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824241 8i1o:B (2.4) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824242 8i1o:B (2.4) BS02 ADX 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824243 8i1o:C (2.4) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824244 8i1o:C (2.4) BS02 ADX 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824245 8i1o:D (2.4) BS01 ADP 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824246 8i1o:D (2.4) BS02 ADX 2.7.1.25
    2.7.7.4    		 GO:0000103 ... O95340 37207644
    824247 8i1u:A (3.24) BS01 ADP ? GO:0000242 ... P17987 38307855
    824248 8i1u:A (3.24) BS02 AF3 ? GO:0000242 ... P17987 38307855
    824249 8i1u:B (3.24) BS01 ADP ? GO:0002199 ... P78371 38307855
    824250 8i1u:B (3.24) BS02 MG ? GO:0002199 ... P78371 38307855
    824251 8i1u:B (3.24) BS03 AF3 ? GO:0002199 ... P78371 38307855
    824252 8i1u:C (3.24) BS01 ADP ? GO:0002199 ... P49368 38307855
    824253 8i1u:C (3.24) BS02 AF3 ? GO:0002199 ... P49368 38307855
    824254 8i1u:D (3.24) BS01 ADP ? GO:0002199 ... P50991 38307855
    824255 8i1u:D (3.24) BS02 AF3 ? GO:0002199 ... P50991 38307855
    824256 8i1u:E (3.24) BS01 ADP ? GO:0003730 ... P48643 38307855
    824257 8i1u:E (3.24) BS02 AF3 ? GO:0003730 ... P48643 38307855
    824258 8i1u:F (3.24) BS01 ADP ? GO:0003723 ... P40227 38307855
    824259 8i1u:F (3.24) BS02 AF3 ? GO:0003723 ... P40227 38307855
    824260 8i1u:G (3.24) BS01 ADP ? GO:0005515 ... Q99832 38307855
    824261 8i1u:G (3.24) BS02 AF3 ? GO:0005515 ... Q99832 38307855
    824262 8i1u:H (3.24) BS01 ADP ? GO:0002199 ... P50990 38307855
    824263 8i1u:H (3.24) BS02 AF3 ? GO:0002199 ... P50990 38307855
    824264 8i1u:I (3.24) BS01 ADP ? GO:0000242 ... P17987 38307855
    824265 8i1u:I (3.24) BS02 AF3 ? GO:0000242 ... P17987 38307855
    824266 8i1u:J (3.24) BS01 ADP ? GO:0002199 ... P78371 38307855
    824267 8i1u:J (3.24) BS02 AF3 ? GO:0002199 ... P78371 38307855
    824268 8i1u:K (3.24) BS01 ADP ? GO:0002199 ... P49368 38307855
    824269 8i1u:K (3.24) BS02 AF3 ? GO:0002199 ... P49368 38307855
    824270 8i1u:L (3.24) BS01 ADP ? GO:0002199 ... P50991 38307855
    824271 8i1u:L (3.24) BS02 AF3 ? GO:0002199 ... P50991 38307855
    824272 8i1u:M (3.24) BS01 ADP ? GO:0003730 ... P48643 38307855
    824273 8i1u:M (3.24) BS02 AF3 ? GO:0003730 ... P48643 38307855
    824274 8i1u:N (3.24) BS01 ADP ? GO:0003723 ... P40227 38307855
    824275 8i1u:N (3.24) BS02 AF3 ? GO:0003723 ... P40227 38307855
    824276 8i1u:O (3.24) BS01 ADP ? GO:0005515 ... Q99832 38307855
    824277 8i1u:O (3.24) BS02 AF3 ? GO:0005515 ... Q99832 38307855
    824278 8i1u:P (3.24) BS01 ADP ? GO:0002199 ... P50990 38307855
    824279 8i1w:B (1.8) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824280 8i1y:A (1.78) BS01 O7L 6.1.1.2 GO:0000166 ... P00954 37070195
    824281 8i1y:B (1.78) BS01 O7L 6.1.1.2 GO:0000166 ... P00954 37070195
    824282 8i1y:B (1.78) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824283 8i1z:A (1.8) BS01 O7R 6.1.1.2 GO:0000166 ... P00954 37070195
    824284 8i1z:B (1.8) BS01 O7R 6.1.1.2 GO:0000166 ... P00954 37070195
    824285 8i1z:B (1.8) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824286 8i22:A (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    824287 8i22:B (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    824288 8i22:C (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    824289 8i22:D (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    824290 8i22:E (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    824291 8i22:F (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    824292 8i23:C (3.03) BS01 dna 2.7.7.6 GO:0000428 ... A3DIZ4 37833284
    824293 8i23:D (3.03) BS01 dna 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824294 8i23:D (3.03) BS02 dna 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824295 8i23:D (3.03) BS03 ZN 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824296 8i23:D (3.03) BS04 ZN 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824297 8i23:D (3.03) BS05 MG 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824298 8i23:F (3.03) BS01 dna ? GO:0003677 ... A3DBH0 37833284
    824299 8i23:F (3.03) BS02 dna ? GO:0003677 ... A3DBH0 37833284
    824300 8i24:C (3.36) BS01 dna 2.7.7.6 GO:0000428 ... A3DIZ4 37833284
    824301 8i24:C (3.36) BS02 dna 2.7.7.6 GO:0000428 ... A3DIZ4 37833284
    824302 8i24:D (3.36) BS01 dna 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824303 8i24:D (3.36) BS02 dna 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824304 8i24:D (3.36) BS03 ZN 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824305 8i24:D (3.36) BS04 ZN 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824306 8i24:D (3.36) BS05 MG 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    824307 8i24:F (3.36) BS01 dna ? GO:0003677 ... A3DH98 37833284
    824308 8i24:F (3.36) BS02 dna ? GO:0003677 ... A3DH98 37833284
    824309 8i27:A (1.95) BS01 O8C 6.1.1.2 GO:0000166 ... P00954 37070195
    824310 8i27:B (1.95) BS01 O8C 6.1.1.2 GO:0000166 ... P00954 37070195
    824311 8i27:B (1.95) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824312 8i29:A (2.72) BS01 CO 1.1.1.- GO:0000166 ... Q8R612 N/A
    824313 8i29:A (2.72) BS02 NAD 1.1.1.- GO:0000166 ... Q8R612 N/A
    824314 8i2a:A (2.35) BS01 5OB 6.1.1.2 GO:0000166 ... P00954 37070195
    824315 8i2a:B (2.35) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824316 8i2a:B (2.35) BS02 5OB 6.1.1.2 GO:0000166 ... P00954 37070195
    824317 8i2b:A (2.2) BS01 O5L 2.3.1.-
    2.3.1.286
    2.4.2.-    		 GO:0070403 ... Q8N6T7 N/A
    824318 8i2b:A (2.2) BS02 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-    		 GO:0070403 ... Q8N6T7 N/A
    824319 8i2b:A (2.2) BS03 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-    		 GO:0070403 ... Q8N6T7 N/A
    824320 8i2b:B (2.2) BS01 O5L 2.3.1.-
    2.3.1.286
    2.4.2.-    		 GO:0070403 ... Q8N6T7 N/A
    824321 8i2b:B (2.2) BS02 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-    		 GO:0070403 ... Q8N6T7 N/A
    824322 8i2b:B (2.2) BS03 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-    		 GO:0070403 ... Q8N6T7 N/A
    824323 8i2c:A (2.07) BS01 O8U 6.1.1.2 GO:0000166 ... P00954 37070195
    824324 8i2c:B (2.07) BS01 O8U 6.1.1.2 GO:0000166 ... P00954 37070195
    824325 8i2c:B (2.07) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824326 8i2g:R (2.8) BS01 CLR ? GO:0004930 ... P23945 36720854
    824327 8i2g:R (2.8) BS02 CLR ? GO:0004930 ... P23945 36720854
    824328 8i2g:R (2.8) BS03 CLR ? GO:0004930 ... P23945 36720854
    824329 8i2g:R (2.8) BS04 CLR ? GO:0004930 ... P23945 36720854
    824330 8i2g:R (2.8) BS05 CLR ? GO:0004930 ... P23945 36720854
    824331 8i2g:R (2.8) BS06 CLR ? GO:0004930 ... P23945 36720854
    824332 8i2g:R (2.8) BS07 CLR ? GO:0004930 ... P23945 36720854
    824333 8i2g:R (2.8) BS08 CLR ? GO:0004930 ... P23945 36720854
    824334 8i2g:R (2.8) BS09 O6F ? GO:0004930 ... P23945 36720854
    824335 8i2j:A (2.65) BS01 O9F 6.1.1.2 GO:0000166 ... P00954 37070195
    824336 8i2j:B (2.65) BS01 O9F 6.1.1.2 GO:0000166 ... P00954 37070195
    824337 8i2j:B (2.65) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824338 8i2l:A (1.95) BS01 CLW 6.1.1.2 GO:0000166 ... P00954 37070195
    824339 8i2l:B (1.95) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824340 8i2l:B (1.95) BS02 CLW 6.1.1.2 GO:0000166 ... P00954 37070195
    824341 8i2m:A (2.1) BS01 3JD 6.1.1.2 GO:0000166 ... P00954 37070195
    824342 8i2m:B (2.1) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    824343 8i2n:A (2.29) BS01 O4U 2.7.11.1 GO:0004672 ... Q13546 38261830
    824344 8i2n:B (2.29) BS01 O4U 2.7.11.1 GO:0004672 ... Q13546 38261830
    824345 8i2p:A (1.797) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    824346 8i2p:A (1.797) BS02 OAY 1.13.11.27 GO:0003868 ... P93836 N/A
    824347 8i2r:A (1.36) BS01 FRU 2.4.1.10 GO:0009758 ... B2IF78 37280168
    824348 8i2r:A (1.36) BS02 BDF 2.4.1.10 GO:0009758 ... B2IF78 37280168
    824349 8i2r:A (1.36) BS03 BDF 2.4.1.10 GO:0009758 ... B2IF78 37280168
    824350 8i2s:A (1.592) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    824351 8i2s:A (1.592) BS02 T4I 1.13.11.27 GO:0003868 ... P93836 N/A
    824352 8i2u:A (1.989) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    824353 8i2u:A (1.989) BS02 T5I 1.13.11.27 GO:0003868 ... P93836 N/A
    824354 8i2z:A (2.3) BS01 RET ? GO:0005216 ... A0A977XLG0 36859551
    824355 8i2z:A (2.3) BS02 K3I ? GO:0005216 ... A0A977XLG0 36859551
    824356 8i30:A (2.0) BS01 OF9 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 37517202
    824357 8i34:A (2.44) BS01 O1U ? N/A A0AA52HX42 37517696
    824358 8i34:A (2.44) BS02 AXT ? N/A A0AA52HX42 37517696
    824359 8i34:B (2.44) BS01 O1U ? GO:0005509 ... A0AA52HX50 37517696
    824360 8i34:B (2.44) BS02 AXT ? GO:0005509 ... A0AA52HX50 37517696
    824361 8i34:C (2.44) BS01 O1U ? N/A A0AA52HX42 37517696
    824362 8i34:C (2.44) BS02 AXT ? N/A A0AA52HX42 37517696
    824363 8i34:D (2.44) BS01 O1U ? GO:0005509 ... A0AA52HX50 37517696
    824364 8i34:D (2.44) BS02 AXT ? GO:0005509 ... A0AA52HX50 37517696
    824365 8i34:E (2.44) BS01 O1U ? N/A A0AA52HX42 37517696
    824366 8i34:E (2.44) BS02 AXT ? N/A A0AA52HX42 37517696
    824367 8i34:F (2.44) BS01 O1U ? GO:0005509 ... A0AA52HX50 37517696
    824368 8i34:F (2.44) BS02 AXT ? GO:0005509 ... A0AA52HX50 37517696
    824369 8i34:G (2.44) BS01 O1U ? N/A A0AA52HX42 37517696
    824370 8i34:G (2.44) BS02 AXT ? N/A A0AA52HX42 37517696
    824371 8i34:H (2.44) BS01 O1U ? GO:0005509 ... A0AA52HX50 37517696
    824372 8i34:H (2.44) BS02 AXT ? GO:0005509 ... A0AA52HX50 37517696
    824373 8i36:A (1.887) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    824374 8i36:A (1.887) BS02 T2I 1.13.11.27 GO:0003868 ... P93836 N/A
    824375 8i39:A (2.85) BS01 A8S ? GO:0005524 ... Q84TH5 37666961
    824376 8i39:B (2.85) BS01 A8S ? GO:0005524 ... Q84TH5 37666961
    824377 8i3a:A (3.04) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    824378 8i3a:A (3.04) BS02 MG ? GO:0005524 ... Q84TH5 37666961
    824379 8i3a:A (3.04) BS03 ATP ? GO:0005524 ... Q84TH5 37666961
    824380 8i3a:B (3.04) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    824381 8i3a:B (3.04) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    824382 8i3a:B (3.04) BS03 MG ? GO:0005524 ... Q84TH5 37666961
    824383 8i3b:A (3.08) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    824384 8i3b:A (3.08) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    824385 8i3b:B (3.08) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    824386 8i3b:B (3.08) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    824387 8i3c:A (2.85) BS01 Y01 ? GO:0005524 ... Q84TH5 37666961
    824388 8i3c:A (2.85) BS02 Y01 ? GO:0005524 ... Q84TH5 37666961
    824389 8i3c:B (2.85) BS01 Y01 ? GO:0005524 ... Q84TH5 37666961
    824390 8i3c:B (2.85) BS02 Y01 ? GO:0005524 ... Q84TH5 37666961
    824391 8i3f:B (1.62) BS01 peptide ? N/A Q04779 37236927
    824392 8i3f:B (1.62) BS02 ZN ? N/A Q04779 37236927
    824393 8i3f:B (1.62) BS03 ZN ? N/A Q04779 37236927
    824394 8i3i:A (2.68) BS01 ANP ? GO:0016877 ... Q00IB3 39794554
    824395 8i3i:B (2.68) BS01 ANP ? GO:0016877 ... Q00IB3 39794554
    824396 8i3i:C (2.68) BS01 ANP ? GO:0016877 ... Q00IB3 39794554
    824397 8i3i:D (2.68) BS01 ANP ? GO:0016877 ... Q00IB3 39794554
    824398 8i3n:A (1.73) BS01 ZN 3.5.4.1 GO:0003824 ... Q12178 N/A
    824399 8i3n:B (1.73) BS01 ZN 3.5.4.1 GO:0003824 ... Q12178 N/A
    824400 8i3n:C (1.73) BS01 ZN 3.5.4.1 GO:0003824 ... Q12178 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).