SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    825601 8i9r:LG (3.1) BS02 rna ? GO:0003723 ... G0SAJ9 37129998
    825602 8i9r:LJ (3.1) BS01 rna ? GO:0003735 ... G0SHQ2 37129998
    825603 8i9r:LL (3.1) BS01 rna ? GO:0003723 ... G0S992 37129998
    825604 8i9r:LL (3.1) BS02 rna ? GO:0003723 ... G0S992 37129998
    825605 8i9r:LM (3.1) BS01 rna ? GO:0003723 ... G0S1R0 37129998
    825606 8i9r:LN (3.1) BS01 rna ? GO:0002181 ... G0RZ88 37129998
    825607 8i9r:LN (3.1) BS02 rna ? GO:0002181 ... G0RZ88 37129998
    825608 8i9r:LO (3.1) BS01 rna ? GO:0003729 ... G0SH61 37129998
    825609 8i9r:LP (3.1) BS01 rna ? GO:0002181 ... G0SGY1 37129998
    825610 8i9r:LP (3.1) BS02 rna ? GO:0002181 ... G0SGY1 37129998
    825611 8i9r:LQ (3.1) BS01 rna ? GO:0003723 ... G0S9B5 37129998
    825612 8i9r:LS (3.1) BS01 rna ? GO:0003735 ... G0SCE2 37129998
    825613 8i9r:LT (3.1) BS01 rna ? GO:0003735 ... G0S0Z3 37129998
    825614 8i9r:LV (3.1) BS01 rna ? GO:0003735 ... G0SI44 37129998
    825615 8i9r:LY (3.1) BS01 rna ? GO:0003723 ... G0RYN9 37129998
    825616 8i9r:LY (3.1) BS02 rna ? GO:0003723 ... G0RYN9 37129998
    825617 8i9r:Le (3.1) BS01 rna ? GO:0003735 ... G0S6V4 37129998
    825618 8i9r:Lf (3.1) BS01 rna ? GO:0003735 ... G0SCL3 37129998
    825619 8i9r:Lh (3.1) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37129998
    825620 8i9r:Lh (3.1) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37129998
    825621 8i9r:Li (3.1) BS01 rna ? GO:0003735 ... G0SBN1 37129998
    825622 8i9r:Lj (3.1) BS01 rna ? GO:0003723 ... G0S101 37129998
    825623 8i9r:Lj (3.1) BS02 rna ? GO:0003723 ... G0S101 37129998
    825624 8i9r:Lj (3.1) BS03 ZN ? GO:0003723 ... G0S101 37129998
    825625 8i9r:Lq (3.1) BS01 rna ? GO:0003723 ... G0S4Z9 37129998
    825626 8i9t:CA (3.6) BS01 rna ? GO:0000027 ... G0RXZ3 37129998
    825627 8i9t:CB (3.6) BS01 rna ? N/A G0S7X0 37129998
    825628 8i9t:CC (3.6) BS01 rna ? GO:0000463 ... G0SCK6 37129998
    825629 8i9t:CE (3.6) BS01 rna 3.6.4.13 GO:0003676 ... G0RYU9 37129998
    825630 8i9t:CF (3.6) BS01 rna ? GO:0000027 ... G0S616 37129998
    825631 8i9t:CG (3.6) BS01 rna ? GO:0003723 ... G0S435 37129998
    825632 8i9t:CH (3.6) BS01 rna ? GO:0005525 ... G0S8F1 37129998
    825633 8i9t:CH (3.6) BS02 GTP ? GO:0005525 ... G0S8F1 37129998
    825634 8i9t:CI (3.6) BS01 rna ? GO:0003676 ... G0S1H0 37129998
    825635 8i9t:CJ (3.6) BS01 rna ? GO:0000463 ... G0SHX6 37129998
    825636 8i9t:CK (3.6) BS01 rna ? GO:0005634 ... G0S081 37129998
    825637 8i9t:CL (3.6) BS01 rna ? GO:0005525 ... G0SEW3 37129998
    825638 8i9t:CM (3.6) BS01 rna ? GO:0000463 ... G0SFL0 37129998
    825639 8i9t:CM (3.6) BS02 rna ? GO:0000463 ... G0SFL0 37129998
    825640 8i9t:CN (3.6) BS01 rna ? GO:0000054 ... G0S683 37129998
    825641 8i9t:CO (3.6) BS01 rna ? GO:0030687 ... G0SHK0 37129998
    825642 8i9t:CP (3.6) BS01 rna ? GO:0000470 ... G0SHQ0 37129998
    825643 8i9t:CQ (3.6) BS01 rna ? GO:0003735 ... G0S497 37129998
    825644 8i9t:CR (3.6) BS01 rna ? GO:0005730 ... G0S832 37129998
    825645 8i9t:CR (3.6) BS02 rna ? GO:0005730 ... G0S832 37129998
    825646 8i9t:CU (3.6) BS01 rna ? GO:0005634 ... G0SGC2 37129998
    825647 8i9t:CX (3.6) BS01 rna ? GO:0003729 ... G0SGJ0 37129998
    825648 8i9t:Cb (3.6) BS01 rna 3.6.4.13 GO:0003676 ... G0S5S8 37129998
    825649 8i9t:Cc (3.6) BS01 rna ? GO:0005634 ... G0S4M2 37129998
    825650 8i9t:Cd (3.6) BS01 rna ? GO:0000460 ... G0S4S2 37129998
    825651 8i9t:Ce (3.6) BS01 rna ? GO:0000460 ... G0SFD6 37129998
    825652 8i9t:Cf (3.6) BS01 rna ? GO:0003677 ... G0S2I7 37129998
    825653 8i9t:Cg (3.6) BS01 rna ? GO:0000027 ... G0S732 37129998
    825654 8i9t:Ch (3.6) BS01 rna ? GO:0000460 ... G0S5P7 37129998
    825655 8i9t:Cz (3.6) BS01 rna ? GO:0005634 ... G0SCP3 37129998
    825656 8i9t:LB (3.6) BS01 rna ? GO:0003723 ... G0RXW1 37129998
    825657 8i9t:LC (3.6) BS01 rna ? GO:0003735 ... G0SFC3 37129998
    825658 8i9t:LC (3.6) BS02 rna ? GO:0003735 ... G0SFC3 37129998
    825659 8i9t:LE (3.6) BS01 rna ? GO:0000027 ... G0S0D6 37129998
    825660 8i9t:LF (3.6) BS01 rna ? GO:0000463 ... G0SFL0 37129998
    825661 8i9t:LG (3.6) BS01 rna ? GO:0003723 ... G0SAJ9 37129998
    825662 8i9t:LG (3.6) BS02 rna ? GO:0003723 ... G0SAJ9 37129998
    825663 8i9t:LG (3.6) BS03 rna ? GO:0003723 ... G0SAJ9 37129998
    825664 8i9t:LH (3.6) BS01 rna ? GO:0003735 ... G0S0E5 37129998
    825665 8i9t:LK (3.6) BS01 rna ? GO:0003735 ... G0SGH8 37129998
    825666 8i9t:LL (3.6) BS01 rna ? GO:0003723 ... G0S992 37129998
    825667 8i9t:LL (3.6) BS02 rna ? GO:0003723 ... G0S992 37129998
    825668 8i9t:LM (3.6) BS01 rna ? GO:0003723 ... G0S1R0 37129998
    825669 8i9t:LN (3.6) BS01 rna ? GO:0002181 ... G0RZ88 37129998
    825670 8i9t:LN (3.6) BS02 rna ? GO:0002181 ... G0RZ88 37129998
    825671 8i9t:LO (3.6) BS01 rna ? GO:0003729 ... G0SH61 37129998
    825672 8i9t:LP (3.6) BS01 rna ? GO:0002181 ... G0SGY1 37129998
    825673 8i9t:LP (3.6) BS02 rna ? GO:0002181 ... G0SGY1 37129998
    825674 8i9t:LQ (3.6) BS01 rna ? GO:0003723 ... G0S9B5 37129998
    825675 8i9t:LS (3.6) BS01 rna ? GO:0003735 ... G0SCE2 37129998
    825676 8i9t:LT (3.6) BS01 rna ? GO:0003735 ... G0S0Z3 37129998
    825677 8i9t:LV (3.6) BS01 rna ? GO:0003735 ... G0SI44 37129998
    825678 8i9t:LY (3.6) BS01 rna ? GO:0003723 ... G0RYN9 37129998
    825679 8i9t:LY (3.6) BS02 rna ? GO:0003723 ... G0RYN9 37129998
    825680 8i9t:Le (3.6) BS01 rna ? GO:0003735 ... G0S6V4 37129998
    825681 8i9t:Lf (3.6) BS01 rna ? GO:0003735 ... G0SCL3 37129998
    825682 8i9t:Lh (3.6) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37129998
    825683 8i9t:Lh (3.6) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37129998
    825684 8i9t:Li (3.6) BS01 rna ? GO:0003735 ... G0SBN1 37129998
    825685 8i9t:Lj (3.6) BS01 rna ? GO:0003723 ... G0S101 37129998
    825686 8i9t:Lj (3.6) BS02 rna ? GO:0003723 ... G0S101 37129998
    825687 8i9t:Lj (3.6) BS03 ZN ? GO:0003723 ... G0S101 37129998
    825688 8i9t:Lq (3.6) BS01 rna ? GO:0003723 ... G0S4Z9 37129998
    825689 8i9u:A (3.1) BS01 ADP ? GO:0000242 ... P17987 38307855
    825690 8i9u:C (3.1) BS01 ADP ? GO:0002199 ... P49368 38307855
    825691 8i9u:D (3.1) BS01 ADP ? GO:0002199 ... P50991 38307855
    825692 8i9u:F (3.1) BS01 ADP ? GO:0003723 ... P40227 38307855
    825693 8i9u:H (3.1) BS01 ADP ? GO:0002199 ... P50990 38307855
    825694 8i9u:I (3.1) BS01 ADP ? GO:0000242 ... P17987 38307855
    825695 8i9u:K (3.1) BS01 ADP ? GO:0002199 ... P49368 38307855
    825696 8i9u:L (3.1) BS01 ADP ? GO:0002199 ... P50991 38307855
    825697 8i9u:N (3.1) BS01 ADP ? GO:0003723 ... P40227 38307855
    825698 8i9u:P (3.1) BS01 ADP ? GO:0002199 ... P50990 38307855
    825699 8i9v:CA (3.1) BS01 rna ? GO:0000027 ... G0RXZ3 37129998
    825700 8i9v:CB (3.1) BS01 rna ? N/A G0S7X0 37129998
    825701 8i9v:CC (3.1) BS01 rna ? GO:0000463 ... G0SCK6 37129998
    825702 8i9v:CE (3.1) BS01 rna 3.6.4.13 GO:0003676 ... G0RYU9 37129998
    825703 8i9v:CF (3.1) BS01 rna ? GO:0000027 ... G0S616 37129998
    825704 8i9v:CG (3.1) BS01 rna ? GO:0003723 ... G0S435 37129998
    825705 8i9v:CH (3.1) BS01 rna ? GO:0005525 ... G0S8F1 37129998
    825706 8i9v:CH (3.1) BS02 GTP ? GO:0005525 ... G0S8F1 37129998
    825707 8i9v:CI (3.1) BS01 rna ? GO:0003676 ... G0S1H0 37129998
    825708 8i9v:CJ (3.1) BS01 rna ? GO:0000463 ... G0SHX6 37129998
    825709 8i9v:CJ (3.1) BS02 rna ? GO:0000463 ... G0SHX6 37129998
    825710 8i9v:CK (3.1) BS01 rna ? GO:0005634 ... G0S081 37129998
    825711 8i9v:CL (3.1) BS01 rna ? GO:0005525 ... G0SEW3 37129998
    825712 8i9v:CM (3.1) BS01 rna ? GO:0000463 ... G0SFL0 37129998
    825713 8i9v:CN (3.1) BS01 rna ? GO:0000054 ... G0S683 37129998
    825714 8i9v:CO (3.1) BS01 rna ? GO:0030687 ... G0SHK0 37129998
    825715 8i9v:CP (3.1) BS01 rna ? GO:0000470 ... G0SHQ0 37129998
    825716 8i9v:CQ (3.1) BS01 rna ? GO:0003735 ... G0S497 37129998
    825717 8i9v:CQ (3.1) BS02 ZN ? GO:0003735 ... G0S497 37129998
    825718 8i9v:CR (3.1) BS01 rna ? GO:0005730 ... G0S832 37129998
    825719 8i9v:CR (3.1) BS02 rna ? GO:0005730 ... G0S832 37129998
    825720 8i9v:CU (3.1) BS01 rna ? GO:0005634 ... G0SGC2 37129998
    825721 8i9v:CX (3.1) BS01 rna ? GO:0003729 ... G0SGJ0 37129998
    825722 8i9v:Cb (3.1) BS01 rna 3.6.4.13 GO:0003676 ... G0S5S8 37129998
    825723 8i9v:Cc (3.1) BS01 rna ? GO:0005634 ... G0S4M2 37129998
    825724 8i9v:Cd (3.1) BS01 rna ? GO:0000460 ... G0S4S2 37129998
    825725 8i9v:Cd (3.1) BS02 rna ? GO:0000460 ... G0S4S2 37129998
    825726 8i9v:Ce (3.1) BS01 rna ? GO:0000460 ... G0SFD6 37129998
    825727 8i9v:Cf (3.1) BS01 rna ? GO:0003677 ... G0S2I7 37129998
    825728 8i9v:Cz (3.1) BS01 rna ? GO:0005634 ... G0SCP3 37129998
    825729 8i9v:LB (3.1) BS01 rna ? GO:0003723 ... G0RXW1 37129998
    825730 8i9v:LC (3.1) BS01 rna ? GO:0003735 ... G0SFC3 37129998
    825731 8i9v:LC (3.1) BS02 rna ? GO:0003735 ... G0SFC3 37129998
    825732 8i9v:LE (3.1) BS01 rna ? GO:0000027 ... G0S0D6 37129998
    825733 8i9v:LF (3.1) BS01 rna ? GO:0000463 ... G0SFL0 37129998
    825734 8i9v:LG (3.1) BS01 rna ? GO:0003723 ... G0SAJ9 37129998
    825735 8i9v:LG (3.1) BS02 rna ? GO:0003723 ... G0SAJ9 37129998
    825736 8i9v:LG (3.1) BS03 rna ? GO:0003723 ... G0SAJ9 37129998
    825737 8i9v:LH (3.1) BS01 rna ? GO:0003735 ... G0S0E5 37129998
    825738 8i9v:LK (3.1) BS01 rna ? GO:0003735 ... G0SGH8 37129998
    825739 8i9v:LL (3.1) BS01 rna ? GO:0003723 ... G0S992 37129998
    825740 8i9v:LL (3.1) BS02 rna ? GO:0003723 ... G0S992 37129998
    825741 8i9v:LM (3.1) BS01 rna ? GO:0003723 ... G0S1R0 37129998
    825742 8i9v:LN (3.1) BS01 rna ? GO:0002181 ... G0RZ88 37129998
    825743 8i9v:LN (3.1) BS02 rna ? GO:0002181 ... G0RZ88 37129998
    825744 8i9v:LO (3.1) BS01 rna ? GO:0003729 ... G0SH61 37129998
    825745 8i9v:LP (3.1) BS01 rna ? GO:0002181 ... G0SGY1 37129998
    825746 8i9v:LP (3.1) BS02 rna ? GO:0002181 ... G0SGY1 37129998
    825747 8i9v:LQ (3.1) BS01 rna ? GO:0003723 ... G0S9B5 37129998
    825748 8i9v:LS (3.1) BS01 rna ? GO:0003735 ... G0SCE2 37129998
    825749 8i9v:LT (3.1) BS01 rna ? GO:0003735 ... G0S0Z3 37129998
    825750 8i9v:LV (3.1) BS01 rna ? GO:0003735 ... G0SI44 37129998
    825751 8i9v:LY (3.1) BS01 rna ? GO:0003723 ... G0RYN9 37129998
    825752 8i9v:LY (3.1) BS02 rna ? GO:0003723 ... G0RYN9 37129998
    825753 8i9v:Ld (3.1) BS01 rna ? GO:0002181 ... G0SD68 37129998
    825754 8i9v:Le (3.1) BS01 rna ? GO:0003735 ... G0S6V4 37129998
    825755 8i9v:Lf (3.1) BS01 rna ? GO:0003735 ... G0SCL3 37129998
    825756 8i9v:Lh (3.1) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37129998
    825757 8i9v:Lh (3.1) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37129998
    825758 8i9v:Li (3.1) BS01 rna ? GO:0003735 ... G0SBN1 37129998
    825759 8i9v:Lj (3.1) BS01 rna ? GO:0003723 ... G0S101 37129998
    825760 8i9v:Lj (3.1) BS02 rna ? GO:0003723 ... G0S101 37129998
    825761 8i9v:Lj (3.1) BS03 ZN ? GO:0003723 ... G0S101 37129998
    825762 8i9v:Lq (3.1) BS01 rna ? GO:0003723 ... G0S4Z9 37129998
    825763 8i9w:CA (3.1) BS01 rna ? GO:0000027 ... G0RXZ3 37129998
    825764 8i9w:CB (3.1) BS01 rna ? N/A G0S7X0 37129998
    825765 8i9w:CC (3.1) BS01 rna ? GO:0000463 ... G0SCK6 37129998
    825766 8i9w:CE (3.1) BS01 rna 3.6.4.13 GO:0003676 ... G0RYU9 37129998
    825767 8i9w:CF (3.1) BS01 rna ? GO:0000027 ... G0S616 37129998
    825768 8i9w:CG (3.1) BS01 rna ? GO:0003723 ... G0S435 37129998
    825769 8i9w:CH (3.1) BS01 rna ? GO:0005525 ... G0S8F1 37129998
    825770 8i9w:CH (3.1) BS02 GTP ? GO:0005525 ... G0S8F1 37129998
    825771 8i9w:CI (3.1) BS01 rna ? GO:0003676 ... G0S1H0 37129998
    825772 8i9w:CJ (3.1) BS01 rna ? GO:0000463 ... G0SHX6 37129998
    825773 8i9w:CJ (3.1) BS02 rna ? GO:0000463 ... G0SHX6 37129998
    825774 8i9w:CK (3.1) BS01 rna ? GO:0005634 ... G0S081 37129998
    825775 8i9w:CL (3.1) BS01 rna ? GO:0005525 ... G0SEW3 37129998
    825776 8i9w:CM (3.1) BS01 rna ? GO:0000463 ... G0SFL0 37129998
    825777 8i9w:CN (3.1) BS01 rna ? GO:0000054 ... G0S683 37129998
    825778 8i9w:CO (3.1) BS01 rna ? GO:0030687 ... G0SHK0 37129998
    825779 8i9w:CP (3.1) BS01 rna ? GO:0000470 ... G0SHQ0 37129998
    825780 8i9w:CQ (3.1) BS01 rna ? GO:0003735 ... G0S497 37129998
    825781 8i9w:CQ (3.1) BS02 ZN ? GO:0003735 ... G0S497 37129998
    825782 8i9w:CR (3.1) BS01 rna ? GO:0005730 ... G0S832 37129998
    825783 8i9w:CR (3.1) BS02 rna ? GO:0005730 ... G0S832 37129998
    825784 8i9w:CS (3.1) BS01 rna ? GO:0000463 ... G0SGD8 37129998
    825785 8i9w:CU (3.1) BS01 rna ? GO:0005634 ... G0SGC2 37129998
    825786 8i9w:CV (3.1) BS01 rna ? GO:0003735 ... G0SHJ6 37129998
    825787 8i9w:CX (3.1) BS01 rna ? GO:0003729 ... G0SGJ0 37129998
    825788 8i9w:Cb (3.1) BS01 rna 3.6.4.13 GO:0003676 ... G0S5S8 37129998
    825789 8i9w:Cz (3.1) BS01 rna ? GO:0005634 ... G0SCP3 37129998
    825790 8i9w:LB (3.1) BS01 rna ? GO:0003723 ... G0RXW1 37129998
    825791 8i9w:LC (3.1) BS01 rna ? GO:0003735 ... G0SFC3 37129998
    825792 8i9w:LC (3.1) BS02 rna ? GO:0003735 ... G0SFC3 37129998
    825793 8i9w:LE (3.1) BS01 rna ? GO:0000027 ... G0S0D6 37129998
    825794 8i9w:LF (3.1) BS01 rna ? GO:0000463 ... G0SFL0 37129998
    825795 8i9w:LG (3.1) BS01 rna ? GO:0003723 ... G0SAJ9 37129998
    825796 8i9w:LG (3.1) BS02 rna ? GO:0003723 ... G0SAJ9 37129998
    825797 8i9w:LH (3.1) BS01 rna ? GO:0003735 ... G0S0E5 37129998
    825798 8i9w:LK (3.1) BS01 rna ? GO:0003735 ... G0SGH8 37129998
    825799 8i9w:LL (3.1) BS01 rna ? GO:0003723 ... G0S992 37129998
    825800 8i9w:LM (3.1) BS01 rna ? GO:0003723 ... G0S1R0 37129998

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).