SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    82401 2f3y:A (1.45) BS04 CA ? GO:0000922 ... P0DP23 16338416
    82402 2f3y:A (1.45) BS05 CA ? GO:0000922 ... P0DP23 16338416
    82403 2f3z:A (1.6) BS01 peptide ? GO:0000922 ... P0DP23 16338416
    82404 2f3z:A (1.6) BS02 CA ? GO:0000922 ... P0DP23 16338416
    82405 2f3z:A (1.6) BS03 CA ? GO:0000922 ... P0DP23 16338416
    82406 2f3z:A (1.6) BS04 CA ? GO:0000922 ... P0DP23 16338416
    82407 2f3z:A (1.6) BS05 CA ? GO:0000922 ... P0DP23 16338416
    82408 2f43:A (3.0) BS01 ATP 3.6.3.14 GO:0001937 ... P15999 16531409
    82409 2f43:B (3.0) BS01 VO4 7.1.2.2 GO:0001889 ... P10719 16531409
    82410 2f43:B (3.0) BS02 MG 7.1.2.2 GO:0001889 ... P10719 16531409
    82411 2f43:B (3.0) BS03 ADP 7.1.2.2 GO:0001889 ... P10719 16531409
    82412 2f44:A (2.4) BS01 ZN ? N/A Q9JLU4 16439662
    82413 2f44:B (2.4) BS01 ZN ? N/A Q9JLU4 16439662
    82414 2f44:C (2.4) BS01 ZN ? N/A Q9JLU4 16439662
    82415 2f48:A (2.11) BS01 FBP 2.7.1.90 GO:0003872 ... P70826 N/A
    82416 2f48:B (2.11) BS01 FBP 2.7.1.90 GO:0003872 ... P70826 N/A
    82417 2f48:B (2.11) BS02 AF3 2.7.1.90 GO:0003872 ... P70826 N/A
    82418 2f49:A (1.9) BS01 peptide 2.7.11.24 GO:0000749 ... P16892 16424299
    82419 2f49:A (1.9) BS02 MG 2.7.11.24 GO:0000749 ... P16892 16424299
    82420 2f49:B (1.9) BS01 MG 2.7.11.24 GO:0000749 ... P16892 16424299
    82421 2f4a:A (1.95) BS01 TOU 3.2.1.17 GO:0003796 ... P00698 16600702
    82422 2f4a:A (1.95) BS02 TOU 3.2.1.17 GO:0003796 ... P00698 16600702
    82423 2f4b:A (2.07) BS01 EHA ? GO:0003677 ... P37231 16451087 MOAD: ic50=50nM
    BindingDB: IC50=50nM, EC50=70nM
    82424 2f4f:A (1.8) BS01 MN ? GO:0003677 ... Q97Y68 16340015
    82425 2f4f:B (1.8) BS01 MN ? GO:0003677 ... Q97Y68 16340015
    82426 2f4g:A (1.654) BS01 BRJ 3.2.1.17 GO:0003796 ... P00698 16600702
    82427 2f4j:A (1.91) BS01 VX6 2.7.10.2 GO:0004672 ... P00519 16424036 BindingDB: IC50=420nM, Kd=9.4nM, Ki=42nM
    82428 2f4l:A (2.5) BS01 ZN ? GO:0016811 ... Q9WXX3 N/A
    82429 2f4l:A (2.5) BS02 ZN ? GO:0016811 ... Q9WXX3 N/A
    82430 2f4l:B (2.5) BS01 ZN ? GO:0016811 ... Q9WXX3 N/A
    82431 2f4l:B (2.5) BS02 ZN ? GO:0016811 ... Q9WXX3 N/A
    82432 2f4l:C (2.5) BS01 ZN ? GO:0016811 ... Q9WXX3 N/A
    82433 2f4l:C (2.5) BS02 ZN ? GO:0016811 ... Q9WXX3 N/A
    82434 2f4l:D (2.5) BS01 ZN ? GO:0016811 ... Q9WXX3 N/A
    82435 2f4l:D (2.5) BS02 ZN ? GO:0016811 ... Q9WXX3 N/A
    82436 2f4m:A (1.85) BS01 ZN 3.5.1.52 N/A Q9JI78 16500903
    82437 2f4o:A (2.26) BS01 peptide 3.5.1.52 N/A Q9JI78 16500903
    82438 2f4o:A (2.26) BS02 ZN 3.5.1.52 N/A Q9JI78 16500903
    82439 2f4o:A (2.26) BS03 ZN 3.5.1.52 N/A Q9JI78 16500903
    82440 2f4v:B (3.8) BS01 rna ? GO:0003735 ... P80371 16492561
    82441 2f4v:C (3.8) BS01 rna ? GO:0003676 ... P80372 16492561
    82442 2f4v:D (3.8) BS01 rna ? GO:0003723 ... P80373 16492561
    82443 2f4v:D (3.8) BS02 ZN ? GO:0003723 ... P80373 16492561
    82444 2f4v:D (3.8) BS03 MG ? GO:0003723 ... P80373 16492561
    82445 2f4v:E (3.8) BS01 rna ? GO:0003723 ... Q5SHQ5 16492561
    82446 2f4v:F (3.8) BS01 rna ? GO:0003735 ... Q5SLP8 16492561
    82447 2f4v:G (3.8) BS01 rna ? GO:0000049 ... P17291 16492561
    82448 2f4v:H (3.8) BS01 rna ? GO:0003735 ... P0DOY9 16492561
    82449 2f4v:I (3.8) BS01 rna ? GO:0003723 ... P80374 16492561
    82450 2f4v:J (3.8) BS01 rna ? GO:0000049 ... Q5SHN7 16492561
    82451 2f4v:K (3.8) BS01 rna ? GO:0003735 ... P80376 16492561
    82452 2f4v:L (3.8) BS01 rna ? GO:0000049 ... Q5SHN3 16492561
    82453 2f4v:M (3.8) BS01 rna ? GO:0000049 ... P80377 16492561
    82454 2f4v:N (3.8) BS01 rna ? GO:0003735 ... P0DOY6 16492561
    82455 2f4v:N (3.8) BS02 ZN ? GO:0003735 ... P0DOY6 16492561
    82456 2f4v:O (3.8) BS01 rna ? GO:0003735 ... Q5SJ76 16492561
    82457 2f4v:P (3.8) BS01 rna ? GO:0003735 ... Q5SJH3 16492561
    82458 2f4v:Q (3.8) BS01 rna ? GO:0003735 ... P0DOY7 16492561
    82459 2f4v:R (3.8) BS01 rna ? GO:0003735 ... Q5SLQ0 16492561
    82460 2f4v:S (3.8) BS01 rna ? GO:0000028 ... Q5SHP2 16492561
    82461 2f4v:T (3.8) BS01 rna ? GO:0003723 ... P80380 16492561
    82462 2f4y:C (2.15) BS01 ZN 3.1.27.- GO:0003723 ... P00648 16600702
    82463 2f53:A (2.1) BS01 peptide ? N/A P04439 16600963
    82464 2f53:D (2.1) BS01 peptide ? N/A P01848 16600963
    82465 2f53:E (2.1) BS01 peptide N/A N/A N/A 16600963
    82466 2f54:A (2.7) BS01 peptide ? N/A P04439 16600963
    82467 2f54:D (2.7) BS01 peptide ? N/A P01848 16600963
    82468 2f54:E (2.7) BS01 peptide ? N/A P01850 16600963
    82469 2f54:F (2.7) BS01 peptide ? N/A P04439 16600963
    82470 2f54:K (2.7) BS01 peptide ? N/A P01848 16600963
    82471 2f54:L (2.7) BS01 peptide ? N/A P01850 16600963
    82472 2f55:A (3.3) BS01 rna 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... O92972 16306038
    82473 2f55:B (3.3) BS01 rna 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... O92972 16306038
    82474 2f55:C (3.3) BS01 rna 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0004386 ... O92972 16306038
    82475 2f56:A (1.955) BS01 URE 3.1.27.- GO:0003723 ... P00648 16600702
    82476 2f56:A (1.955) BS02 URE 3.1.27.- GO:0003723 ... P00648 16600702
    82477 2f56:B (1.955) BS01 URE 3.1.27.- GO:0003723 ... P00648 16600702
    82478 2f56:B (1.955) BS02 URE 3.1.27.- GO:0003723 ... P00648 16600702
    82479 2f57:B (1.8) BS01 23D 2.7.11.1 GO:0004672 ... Q9P286 17292838
    82480 2f58:H (2.8) BS01 peptide N/A GO:0003823 ... P18532 10368281
    82481 2f58:L (2.8) BS01 peptide ? GO:0005576 ... P01666 10368281
    82482 2f59:A (2.3) BS01 CA 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82483 2f59:A (2.3) BS02 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82484 2f59:A (2.3) BS03 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82485 2f59:B (2.3) BS01 CA 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82486 2f59:B (2.3) BS02 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82487 2f59:B (2.3) BS03 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82488 2f59:C (2.3) BS01 CA 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82489 2f59:C (2.3) BS02 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82490 2f59:C (2.3) BS03 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82491 2f59:D (2.3) BS01 CA 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82492 2f59:D (2.3) BS02 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82493 2f59:D (2.3) BS03 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82494 2f59:E (2.3) BS01 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82495 2f59:E (2.3) BS02 INI 2.5.1.78 GO:0000906 ... Q57DY1 17854827
    82496 2f5b:H (2.0) BS01 peptide N/A N/A N/A 19740978
    82497 2f5b:L (2.0) BS01 peptide N/A N/A N/A 19740978
    82498 2f5c:A (2.4) BS01 MN ? GO:0003677 ... P54512 16533030
    82499 2f5c:A (2.4) BS02 MN ? GO:0003677 ... P54512 16533030
    82500 2f5d:A (1.9) BS01 MN ? GO:0003677 ... P54512 16533030
    82501 2f5d:A (1.9) BS02 MN ? GO:0003677 ... P54512 16533030
    82502 2f5d:B (1.9) BS01 MN ? GO:0003677 ... P54512 16533030
    82503 2f5d:B (1.9) BS02 MN ? GO:0003677 ... P54512 16533030
    82504 2f5e:A (2.2) BS01 MN ? GO:0003677 ... P54512 16533030
    82505 2f5e:A (2.2) BS02 MN ? GO:0003677 ... P54512 16533030
    82506 2f5e:B (2.2) BS01 MN ? GO:0003677 ... P54512 16533030
    82507 2f5e:B (2.2) BS02 MN ? GO:0003677 ... P54512 16533030
    82508 2f5f:A (2.4) BS01 MN ? GO:0003677 ... P54512 16533030
    82509 2f5f:A (2.4) BS02 MN ? GO:0003677 ... P54512 16533030
    82510 2f5f:B (2.4) BS01 MN ? GO:0003677 ... P54512 16533030
    82511 2f5f:B (2.4) BS02 MN ? GO:0003677 ... P54512 16533030
    82512 2f5m:B (1.95) BS01 BRJ 3.1.27.- GO:0003723 ... P00648 16600702
    82513 2f5m:C (1.95) BS01 BRJ 3.1.27.- GO:0003723 ... P00648 16600702
    82514 2f5n:A (2.0) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82515 2f5n:A (2.0) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82516 2f5n:A (2.0) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82517 2f5o:A (2.05) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82518 2f5o:A (2.05) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82519 2f5o:A (2.05) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82520 2f5p:A (2.0) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82521 2f5p:A (2.0) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82522 2f5p:A (2.0) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82523 2f5q:A (2.35) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82524 2f5q:A (2.35) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82525 2f5q:A (2.35) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82526 2f5s:A (2.35) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82527 2f5s:A (2.35) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82528 2f5s:A (2.35) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P84131 16497933
    82529 2f5t:X (1.45) BS01 GLC ? N/A Q7LYW4 16473881
    82530 2f5t:X (1.45) BS02 GLC ? N/A Q7LYW4 16473881
    82531 2f5v:A (1.41) BS01 KBG 1.1.3.10 GO:0016614 ... Q8J136 16716069
    82532 2f5v:A (1.41) BS02 FAD 1.1.3.10 GO:0016614 ... Q8J136 16716069
    82533 2f5w:C (2.001) BS01 TOU 3.1.27.- GO:0003723 ... P00648 16600702
    82534 2f5x:A (1.72) BS01 ASP ? N/A Q7VTS1 16403514
    82535 2f5x:B (1.72) BS01 ASP ? N/A Q7VTS1 16403514
    82536 2f5x:C (1.72) BS01 ASP ? N/A Q7VTS1 16403514
    82537 2f5z:A (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82538 2f5z:B (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82539 2f5z:C (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82540 2f5z:D (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82541 2f5z:E (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82542 2f5z:F (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82543 2f5z:G (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82544 2f5z:H (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82545 2f5z:I (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82546 2f5z:J (2.18) BS01 FAD 1.8.1.4 GO:0001669 ... P09622 16442803
    82547 2f62:A (1.5) BS01 12M 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82548 2f62:A (1.5) BS02 12M 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82549 2f62:B (1.5) BS01 12M 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82550 2f62:B (1.5) BS02 12M 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82551 2f64:A (1.6) BS01 12Q 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82552 2f64:A (1.6) BS02 12Q 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82553 2f64:B (1.6) BS01 12Q 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82554 2f64:B (1.6) BS02 12Q 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82555 2f67:A (1.6) BS01 12B 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82556 2f67:A (1.6) BS02 12B 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82557 2f67:B (1.6) BS01 12B 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82558 2f67:B (1.6) BS02 12B 2.4.2.6 GO:0005634 ... Q57VC7 17004709
    82559 2f69:A (1.3) BS01 peptide 2.1.1.364 GO:0005694 ... Q8WTS6 16415881
    82560 2f69:A (1.3) BS02 SAH 2.1.1.364 GO:0005694 ... Q8WTS6 16415881
    82561 2f6a:B (3.29) BS01 peptide ? GO:0005518 ... Q53654 16362049
    82562 2f6a:D (3.29) BS01 peptide ? GO:0005518 ... Q53654 16362049
    82563 2f6a:H (3.29) BS01 peptide ? N/A Q805R9 16362049
    82564 2f6a:I (3.29) BS01 peptide ? N/A Q805R9 16362049
    82565 2f6c:A (1.84) BS01 FAD 1.1.3.10 GO:0016614 ... Q8J136 16716069
    82566 2f6d:A (1.6) BS01 GLC 3.2.1.3 GO:0000324 ... P08017 16649993
    82567 2f6d:A (1.6) BS02 GLC 3.2.1.3 GO:0000324 ... P08017 16649993
    82568 2f6d:A (1.6) BS03 AC1 3.2.1.3 GO:0000324 ... P08017 16649993
    82569 2f6d:A (1.6) BS04 GLC 3.2.1.3 GO:0000324 ... P08017 16649993
    82570 2f6d:A (1.6) BS05 AC1 3.2.1.3 GO:0000324 ... P08017 16649993
    82571 2f6j:A (2.0) BS01 peptide ? GO:0006357 ... Q12830 16728978
    82572 2f6j:A (2.0) BS02 ZN ? GO:0006357 ... Q12830 16728978
    82573 2f6j:A (2.0) BS03 ZN ? GO:0006357 ... Q12830 16728978
    82574 2f6j:B (2.0) BS01 ZN ? GO:0006357 ... Q12830 16728978
    82575 2f6j:B (2.0) BS02 ZN ? GO:0006357 ... Q12830 16728978
    82576 2f6j:C (2.0) BS01 ZN ? GO:0006357 ... Q12830 16728978
    82577 2f6j:C (2.0) BS02 ZN ? GO:0006357 ... Q12830 16728978
    82578 2f6k:A (2.5) BS01 MN 4.1.1.52 GO:0005737 ... F9US96 N/A
    82579 2f6k:B (2.5) BS01 MN 4.1.1.52 GO:0005737 ... F9US96 N/A
    82580 2f6n:A (2.0) BS01 ZN ? GO:0006357 ... Q12830 16728978
    82581 2f6n:A (2.0) BS02 ZN ? GO:0006357 ... Q12830 16728978
    82582 2f6n:B (2.0) BS01 ZN ? GO:0006357 ... Q12830 16728978
    82583 2f6n:B (2.0) BS02 ZN ? GO:0006357 ... Q12830 16728978
    82584 2f6r:A (1.7) BS01 ACO 2.7.1.24
    2.7.7.3
    GO:0004140 ... Q9DBL7 N/A
    82585 2f6s:A (2.5) BS01 ZN 2.7.7.108 GO:0051302 ... O25774 N/A
    82586 2f6s:B (2.5) BS01 ZN 2.7.7.108 GO:0051302 ... O25774 N/A
    82587 2f6t:A (1.7) BS01 1C2 3.1.3.48 GO:0004725 ... P18031 16386905 MOAD: Ki=24uM
    82588 2f6v:A (1.7) BS01 SK2 3.1.3.48 GO:0004725 ... P18031 16386905 MOAD: ic50=37uM
    82589 2f6w:A (2.2) BS01 UN3 3.1.3.48 GO:0004725 ... P18031 16386905
    82590 2f6x:A (2.0) BS01 1GP 2.5.1.41 GO:0000287 ... O29844 16377641
    82591 2f6x:B (2.0) BS01 1GP 2.5.1.41 GO:0000287 ... O29844 16377641
    82592 2f6y:A (2.15) BS01 ENT 3.1.3.48 GO:0004725 ... P18031 16386905 MOAD: ic50=134.8uM
    82593 2f6z:A (1.7) BS01 UN5 3.1.3.48 GO:0004725 ... P18031 16386905 MOAD: ic50=4.8uM
    BindingDB: IC50=4800nM
    82594 2f70:A (2.12) BS01 UN6 3.1.3.48 GO:0004725 ... P18031 16386905 MOAD: ic50=33.5uM
    82595 2f71:A (1.55) BS01 UN7 3.1.3.48 GO:0004725 ... P18031 16386905 MOAD: ic50=2.5uM
    82596 2f74:A (2.7) BS01 peptide ? N/A P01899 16375919
    82597 2f74:D (2.7) BS01 peptide ? N/A P01899 16375919
    82598 2f7a:B (1.9) BS01 CCU ? N/A O68014 17291527 MOAD: Kd=0.12mM
    82599 2f7c:A (2.162) BS01 CCU ? N/A P07774 17291527
    82600 2f7d:A (1.9) BS01 NOQ 3.4.22.38 GO:0006508 ... P43236 16451072

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).