SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    826201 8iam:D (3.1) BS01 Z1T ? GO:0003674 ... Q06144 38285738
    826202 8iam:F (3.1) BS01 PLP 2.3.1.50 GO:0004758 ... P40970 38285738
    826203 8iam:F (3.1) BS02 Z1T 2.3.1.50 GO:0004758 ... P40970 38285738
    826204 8iam:H (3.1) BS01 Z1T ? GO:0003674 ... Q06144 38285738
    826205 8ian:A (2.08) BS01 CA N/A N/A N/A 38647782
    826206 8ian:B (2.08) BS01 CA N/A N/A N/A 38647782
    826207 8iao:AC (4.2) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826208 8iao:AC (4.2) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826209 8iao:AC (4.2) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826210 8iao:AC (4.2) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826211 8iao:AD (4.2) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826212 8iao:Aa (4.2) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    826213 8iao:Ab (4.2) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    826214 8iao:Ac (4.2) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826215 8iao:Ac (4.2) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826216 8iao:Ac (4.2) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826217 8iao:Ac (4.2) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826218 8iao:Ad (4.2) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826219 8iao:B (4.2) BS01 SF4 N/A GO:0003954 ... Q9DC70 39395414
    826220 8iao:B (4.2) BS02 UQ1 N/A GO:0003954 ... Q9DC70 39395414
    826221 8iao:B (4.2) BS03 UQ9 N/A GO:0003954 ... Q9DC70 39395414
    826222 8iao:D (4.2) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    826223 8iao:D (4.2) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    826224 8iao:E (4.2) BS01 peptide N/A GO:0005739 ... Q9D6J6 39395414
    826225 8iao:E (4.2) BS02 FES N/A GO:0005739 ... Q9D6J6 39395414
    826226 8iao:F (4.2) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    826227 8iao:F (4.2) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    826228 8iao:F (4.2) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    826229 8iao:G (4.2) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826230 8iao:G (4.2) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826231 8iao:G (4.2) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    826232 8iao:H (4.2) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    826233 8iao:I (4.2) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826234 8iao:I (4.2) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826235 8iao:O (4.2) BS01 ADP N/A GO:0005739 ... Q99LC3 39395414
    826236 8iao:P (4.2) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    826237 8iao:R (4.2) BS01 ZN N/A GO:0001822 ... P52503 39395414
    826238 8iao:W (4.2) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    826239 8iao:n (4.2) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    826240 8iap:B (3.2) BS01 SF4 N/A GO:0003954 ... Q9DC70 39395414
    826241 8iap:B (3.2) BS02 UQ1 N/A GO:0003954 ... Q9DC70 39395414
    826242 8iap:B (3.2) BS03 UQ9 N/A GO:0003954 ... Q9DC70 39395414
    826243 8iap:D (3.2) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    826244 8iap:D (3.2) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    826245 8iap:E (3.2) BS01 peptide N/A GO:0005739 ... Q9D6J6 39395414
    826246 8iap:E (3.2) BS02 FES N/A GO:0005739 ... Q9D6J6 39395414
    826247 8iap:F (3.2) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    826248 8iap:F (3.2) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    826249 8iap:F (3.2) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    826250 8iap:G (3.2) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826251 8iap:G (3.2) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826252 8iap:G (3.2) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    826253 8iap:H (3.2) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    826254 8iap:I (3.2) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826255 8iap:I (3.2) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826256 8iap:P (3.2) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    826257 8iap:R (3.2) BS01 ZN N/A GO:0001822 ... P52503 39395414
    826258 8iap:W (3.2) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    826259 8iaq:M (3.4) BS01 peptide N/A GO:0001666 ... P03911 39395414
    826260 8iaq:N (3.4) BS01 peptide N/A GO:0005739 ... P03893 39395414
    826261 8iaq:O (3.4) BS01 ADP N/A GO:0005739 ... Q99LC3 39395414
    826262 8iaq:d (3.4) BS01 peptide N/A GO:0005737 ... Q9CQ54 39395414
    826263 8iaq:e (3.4) BS01 peptide N/A GO:0003674 ... Q99LY9 39395414
    826264 8iaq:h (3.4) BS01 peptide N/A GO:0003674 ... Q9CQH3 39395414
    826265 8iaq:n (3.4) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    826266 8iar:AC (3.4) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826267 8iar:AC (3.4) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826268 8iar:AC (3.4) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826269 8iar:AC (3.4) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826270 8iar:AD (3.4) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826271 8iar:Aa (3.4) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    826272 8iar:Ab (3.4) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    826273 8iar:Ac (3.4) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826274 8iar:Ac (3.4) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826275 8iar:Ac (3.4) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826276 8iar:Ac (3.4) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826277 8iar:Ad (3.4) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826278 8iat:A (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826279 8iat:A (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826280 8iat:A (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826281 8iat:B (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826282 8iat:B (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826283 8iat:B (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826284 8iat:C (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826285 8iat:C (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826286 8iat:C (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826287 8iat:D (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826288 8iat:D (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826289 8iat:D (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826290 8iau:A (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826291 8iau:A (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826292 8iau:A (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826293 8iau:B (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826294 8iau:B (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826295 8iau:B (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826296 8iau:C (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826297 8iau:C (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826298 8iau:C (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826299 8iau:D (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826300 8iau:D (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826301 8iau:D (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826302 8iau:E (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826303 8iau:F (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826304 8iau:F (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826305 8iau:F (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826306 8iau:G (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826307 8iau:G (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826308 8iau:G (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826309 8iau:H (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826310 8iau:H (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826311 8iau:H (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826312 8iav:A (2.59) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826313 8iav:B (2.59) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826314 8iav:C (2.59) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826315 8iav:D (2.59) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826316 8iaw:A (2.89) BS01 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826317 8iaw:A (2.89) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826318 8iaw:B (2.89) BS01 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826319 8iaw:B (2.89) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826320 8iax:A (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826321 8iax:A (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826322 8iax:A (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826323 8iax:B (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826324 8iax:B (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826325 8iax:B (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826326 8iax:C (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826327 8iax:C (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826328 8iax:C (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826329 8iax:D (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826330 8iax:D (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826331 8iax:D (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826332 8iax:E (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826333 8iax:E (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826334 8iax:E (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826335 8iax:F (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826336 8iax:F (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826337 8iax:F (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826338 8iax:G (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826339 8iax:G (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826340 8iax:G (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826341 8iax:H (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826342 8iax:H (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826343 8iax:H (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    826344 8iaz:A (3.0) BS01 rna N/A N/A N/A 38575718
    826345 8iaz:A (3.0) BS02 dna N/A N/A N/A 38575718
    826346 8iaz:A (3.0) BS03 dna N/A N/A N/A 38575718
    826347 8iaz:A (3.0) BS04 ZN N/A N/A N/A 38575718
    826348 8ib1:A (1.95) BS01 peptide N/A N/A N/A 37556494
    826349 8ib1:B (1.95) BS01 peptide N/A N/A N/A 37556494
    826350 8ib2:B (3.8) BS01 ADP 3.6.4.- GO:0000786 ... Q6QAQ1 37044097
    826351 8ib2:C (3.8) BS01 ADP 3.6.4.- GO:0000786 ... Q6QAQ1 37044097
    826352 8ib2:D (3.8) BS01 ADP 3.6.4.- GO:0000786 ... Q6QAQ1 37044097
    826353 8ib2:E (3.8) BS01 ADP 3.6.4.- GO:0000786 ... Q6QAQ1 37044097
    826354 8ib2:F (3.8) BS01 ADP 3.6.4.- GO:0000786 ... Q6QAQ1 37044097
    826355 8ib4:AC (4.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826356 8ib4:AC (4.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826357 8ib4:AC (4.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826358 8ib4:AC (4.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826359 8ib4:AD (4.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826360 8ib4:Ac (4.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826361 8ib4:Ac (4.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826362 8ib4:Ac (4.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826363 8ib4:Ac (4.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826364 8ib4:Ad (4.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826365 8ib4:B (4.3) BS01 SF4 N/A GO:0003954 ... Q9DC70 39395414
    826366 8ib4:B (4.3) BS02 UQ1 N/A GO:0003954 ... Q9DC70 39395414
    826367 8ib4:B (4.3) BS03 UQ9 N/A GO:0003954 ... Q9DC70 39395414
    826368 8ib4:D (4.3) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    826369 8ib4:D (4.3) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    826370 8ib4:E (4.3) BS01 peptide N/A GO:0005739 ... Q9D6J6 39395414
    826371 8ib4:E (4.3) BS02 FES N/A GO:0005739 ... Q9D6J6 39395414
    826372 8ib4:F (4.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    826373 8ib4:F (4.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    826374 8ib4:F (4.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    826375 8ib4:G (4.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826376 8ib4:G (4.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826377 8ib4:G (4.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    826378 8ib4:H (4.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    826379 8ib4:I (4.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826380 8ib4:I (4.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826381 8ib4:O (4.3) BS01 ADP N/A GO:0005739 ... Q99LC3 39395414
    826382 8ib4:P (4.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    826383 8ib4:R (4.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    826384 8ib4:W (4.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    826385 8ib4:n (4.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    826386 8ib5:B (3.3) BS01 SF4 N/A GO:0003954 ... Q9DC70 39395414
    826387 8ib5:B (3.3) BS02 UQ1 N/A GO:0003954 ... Q9DC70 39395414
    826388 8ib5:B (3.3) BS03 UQ9 N/A GO:0003954 ... Q9DC70 39395414
    826389 8ib5:D (3.3) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    826390 8ib5:D (3.3) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    826391 8ib5:E (3.3) BS01 peptide N/A GO:0005739 ... Q9D6J6 39395414
    826392 8ib5:E (3.3) BS02 FES N/A GO:0005739 ... Q9D6J6 39395414
    826393 8ib5:F (3.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    826394 8ib5:F (3.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    826395 8ib5:F (3.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    826396 8ib5:G (3.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826397 8ib5:G (3.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826398 8ib5:G (3.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    826399 8ib5:H (3.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    826400 8ib5:I (3.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).