SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    826401 8ib5:I (3.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826402 8ib5:P (3.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    826403 8ib5:R (3.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    826404 8ib5:W (3.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    826405 8ib6:M (3.3) BS01 peptide N/A GO:0001666 ... P03911 39395414
    826406 8ib6:N (3.3) BS01 peptide N/A GO:0005739 ... P03893 39395414
    826407 8ib6:O (3.3) BS01 ADP N/A GO:0005739 ... Q99LC3 39395414
    826408 8ib6:d (3.3) BS01 peptide N/A GO:0005737 ... Q9CQ54 39395414
    826409 8ib6:e (3.3) BS01 peptide N/A GO:0003674 ... Q99LY9 39395414
    826410 8ib6:h (3.3) BS01 peptide N/A GO:0003674 ... Q9CQH3 39395414
    826411 8ib6:n (3.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    826412 8ib7:AC (3.4) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826413 8ib7:AC (3.4) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826414 8ib7:AC (3.4) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826415 8ib7:AC (3.4) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826416 8ib7:AD (3.4) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826417 8ib7:Ac (3.4) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826418 8ib7:Ac (3.4) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826419 8ib7:Ac (3.4) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826420 8ib7:Ac (3.4) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826421 8ib7:Ad (3.4) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826422 8ib9:AC (4.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826423 8ib9:AC (4.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826424 8ib9:AC (4.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826425 8ib9:AC (4.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826426 8ib9:AD (4.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826427 8ib9:Ac (4.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826428 8ib9:Ac (4.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826429 8ib9:Ac (4.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826430 8ib9:Ac (4.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826431 8ib9:Ad (4.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826432 8ib9:B (4.3) BS01 SF4 N/A GO:0003954 ... Q9DC70 39395414
    826433 8ib9:B (4.3) BS02 UQ1 N/A GO:0003954 ... Q9DC70 39395414
    826434 8ib9:D (4.3) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    826435 8ib9:D (4.3) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    826436 8ib9:E (4.3) BS01 peptide N/A GO:0005739 ... Q9D6J6 39395414
    826437 8ib9:E (4.3) BS02 FES N/A GO:0005739 ... Q9D6J6 39395414
    826438 8ib9:F (4.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    826439 8ib9:F (4.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    826440 8ib9:F (4.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    826441 8ib9:G (4.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826442 8ib9:G (4.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826443 8ib9:G (4.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    826444 8ib9:H (4.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    826445 8ib9:I (4.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826446 8ib9:I (4.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826447 8ib9:O (4.3) BS01 ADP N/A GO:0005739 ... Q99LC3 39395414
    826448 8ib9:P (4.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    826449 8ib9:R (4.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    826450 8ib9:W (4.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    826451 8ib9:n (4.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    826452 8iba:B (3.2) BS01 SF4 N/A GO:0003954 ... Q9DC70 39395414
    826453 8iba:B (3.2) BS02 UQ1 N/A GO:0003954 ... Q9DC70 39395414
    826454 8iba:D (3.2) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    826455 8iba:D (3.2) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    826456 8iba:E (3.2) BS01 peptide N/A GO:0005739 ... Q9D6J6 39395414
    826457 8iba:E (3.2) BS02 FES N/A GO:0005739 ... Q9D6J6 39395414
    826458 8iba:F (3.2) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    826459 8iba:F (3.2) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    826460 8iba:F (3.2) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    826461 8iba:G (3.2) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826462 8iba:G (3.2) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826463 8iba:G (3.2) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    826464 8iba:H (3.2) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    826465 8iba:I (3.2) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826466 8iba:I (3.2) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826467 8iba:P (3.2) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    826468 8iba:R (3.2) BS01 ZN N/A GO:0001822 ... P52503 39395414
    826469 8iba:W (3.2) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    826470 8ibb:M (3.3) BS01 peptide N/A GO:0001666 ... P03911 39395414
    826471 8ibb:N (3.3) BS01 peptide N/A GO:0005739 ... P03893 39395414
    826472 8ibb:O (3.3) BS01 ADP N/A GO:0005739 ... Q99LC3 39395414
    826473 8ibb:d (3.3) BS01 peptide N/A GO:0005737 ... Q9CQ54 39395414
    826474 8ibb:e (3.3) BS01 peptide N/A GO:0003674 ... Q99LY9 39395414
    826475 8ibb:h (3.3) BS01 peptide N/A GO:0003674 ... Q9CQH3 39395414
    826476 8ibb:n (3.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    826477 8ibc:AC (3.6) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826478 8ibc:AC (3.6) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826479 8ibc:AC (3.6) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826480 8ibc:AC (3.6) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826481 8ibc:AD (3.6) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826482 8ibc:Ac (3.6) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826483 8ibc:Ac (3.6) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826484 8ibc:Ac (3.6) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826485 8ibc:Ac (3.6) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826486 8ibc:Ad (3.6) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826487 8ibd:AA (4.2) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    826488 8ibd:AB (4.2) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    826489 8ibd:AC (4.2) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826490 8ibd:AC (4.2) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826491 8ibd:AC (4.2) BS03 UQ6 N/A GO:0001666 ... P00158 39395414
    826492 8ibd:AD (4.2) BS01 peptide N/A GO:0005515 ... Q9D0M3 39395414
    826493 8ibd:AD (4.2) BS02 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826494 8ibd:AE (4.2) BS01 peptide N/A GO:0005515 ... Q9CR68 39395414
    826495 8ibd:AE (4.2) BS02 peptide N/A GO:0005515 ... Q9CR68 39395414
    826496 8ibd:Aa (4.2) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    826497 8ibd:Ab (4.2) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    826498 8ibd:Ac (4.2) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826499 8ibd:Ac (4.2) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826500 8ibd:Ac (4.2) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826501 8ibd:Ac (4.2) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826502 8ibd:Ad (4.2) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826503 8ibd:B (4.2) BS01 SF4 N/A GO:0003954 ... Q9DC70 39395414
    826504 8ibd:B (4.2) BS02 UQ1 N/A GO:0003954 ... Q9DC70 39395414
    826505 8ibd:E (4.2) BS01 peptide N/A GO:0005739 ... Q9D6J6 39395414
    826506 8ibd:E (4.2) BS02 FES N/A GO:0005739 ... Q9D6J6 39395414
    826507 8ibd:F (4.2) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    826508 8ibd:F (4.2) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    826509 8ibd:F (4.2) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    826510 8ibd:G (4.2) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826511 8ibd:G (4.2) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826512 8ibd:G (4.2) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    826513 8ibd:H (4.2) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    826514 8ibd:I (4.2) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826515 8ibd:I (4.2) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826516 8ibd:O (4.2) BS01 ADP N/A GO:0005739 ... Q99LC3 39395414
    826517 8ibd:P (4.2) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    826518 8ibd:R (4.2) BS01 ZN N/A GO:0001822 ... P52503 39395414
    826519 8ibd:W (4.2) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    826520 8ibd:n (4.2) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    826521 8ibe:B (3.3) BS01 SF4 N/A GO:0003954 ... Q9DC70 39395414
    826522 8ibe:B (3.3) BS02 UQ1 N/A GO:0003954 ... Q9DC70 39395414
    826523 8ibe:E (3.3) BS01 peptide N/A GO:0005739 ... Q9D6J6 39395414
    826524 8ibe:E (3.3) BS02 FES N/A GO:0005739 ... Q9D6J6 39395414
    826525 8ibe:F (3.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    826526 8ibe:F (3.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    826527 8ibe:F (3.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    826528 8ibe:G (3.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826529 8ibe:G (3.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    826530 8ibe:G (3.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    826531 8ibe:H (3.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    826532 8ibe:I (3.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826533 8ibe:I (3.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    826534 8ibe:P (3.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    826535 8ibe:R (3.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    826536 8ibe:W (3.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    826537 8ibf:M (3.3) BS01 peptide N/A GO:0001666 ... P03911 39395414
    826538 8ibf:N (3.3) BS01 peptide N/A GO:0005739 ... P03893 39395414
    826539 8ibf:O (3.3) BS01 ADP N/A GO:0005739 ... Q99LC3 39395414
    826540 8ibf:d (3.3) BS01 peptide N/A GO:0005737 ... Q9CQ54 39395414
    826541 8ibf:e (3.3) BS01 peptide N/A GO:0003674 ... Q99LY9 39395414
    826542 8ibf:h (3.3) BS01 peptide N/A GO:0003674 ... Q9CQH3 39395414
    826543 8ibf:n (3.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    826544 8ibg:AA (3.8) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    826545 8ibg:AB (3.8) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    826546 8ibg:AC (3.8) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826547 8ibg:AC (3.8) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826548 8ibg:AC (3.8) BS03 UQ6 N/A GO:0001666 ... P00158 39395414
    826549 8ibg:AD (3.8) BS01 peptide N/A GO:0005515 ... Q9D0M3 39395414
    826550 8ibg:AD (3.8) BS02 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826551 8ibg:AE (3.8) BS01 peptide N/A GO:0005515 ... Q9CR68 39395414
    826552 8ibg:AE (3.8) BS02 peptide N/A GO:0005515 ... Q9CR68 39395414
    826553 8ibg:Aa (3.8) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    826554 8ibg:Ab (3.8) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    826555 8ibg:Ac (3.8) BS01 HEM N/A GO:0001666 ... P00158 39395414
    826556 8ibg:Ac (3.8) BS02 HEM N/A GO:0001666 ... P00158 39395414
    826557 8ibg:Ac (3.8) BS03 U10 N/A GO:0001666 ... P00158 39395414
    826558 8ibg:Ac (3.8) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    826559 8ibg:Ad (3.8) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    826560 8ibk:A (1.69) BS01 GLC ? GO:0004556 ... A0A2Z5WH92 37049872
    826561 8ibk:A (1.69) BS02 GLC ? GO:0004556 ... A0A2Z5WH92 37049872
    826562 8ibk:A (1.69) BS03 GLC ? GO:0004556 ... A0A2Z5WH92 37049872
    826563 8ibk:A (1.69) BS04 CA ? GO:0004556 ... A0A2Z5WH92 37049872
    826564 8ibk:A (1.69) BS05 CA ? GO:0004556 ... A0A2Z5WH92 37049872
    826565 8ibl:A (2.6) BS01 CA 3.1.1.74 N/A W0TJ64 N/A
    826566 8ibl:B (2.6) BS01 CA 3.1.1.74 N/A W0TJ64 N/A
    826567 8ibm:A (2.2) BS01 CA 3.1.1.74 N/A W0TJ64 N/A
    826568 8ibm:B (2.2) BS01 CA 3.1.1.74 N/A W0TJ64 N/A
    826569 8ibn:A (3.03) BS01 G2P ? GO:0000917 ... W9BCK7 37429870
    826570 8ibn:B (3.03) BS01 G2P ? GO:0000917 ... W9BCK7 37429870
    826571 8ibn:C (3.03) BS01 G2P ? GO:0000917 ... W9BCK7 37429870
    826572 8ibn:D (3.03) BS01 G2P ? GO:0000917 ... W9BCK7 37429870
    826573 8ibo:A (1.83) BS01 peptide ? N/A P9WPC9 37683752
    826574 8ibp:A (1.45) BS01 peptide ? N/A P9WPC9 37683752
    826575 8ibq:A (1.45) BS01 OWO ? N/A O60885 37382379
    826576 8ibs:A (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826577 8ibs:B (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826578 8ibs:C (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826579 8ibs:D (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826580 8ibs:E (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826581 8ibs:F (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826582 8ibt:A (2.2) BS01 GAL 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826583 8ibt:B (2.2) BS01 GAL 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826584 8ibt:B (2.2) BS02 GAL 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    826585 8ibu:R (3.51) BS01 ERY ? GO:0004930 ... O43193
    P0ABE7
    36921049
    826586 8ibv:R (3.19) BS01 peptide ? GO:0004930 ... O43193
    P0ABE7
    36921049
    826587 8ibw:C (3.6) BS01 dna ? GO:0003964 ... V9H052 37301196
    826588 8ibw:C (3.6) BS02 dna ? GO:0003964 ... V9H052 37301196
    826589 8ibw:C (3.6) BS03 rna ? GO:0003964 ... V9H052 37301196
    826590 8ibw:C (3.6) BS04 ZN ? GO:0003964 ... V9H052 37301196
    826591 8ibw:C (3.6) BS05 ZN ? GO:0003964 ... V9H052 37301196
    826592 8ibx:C (3.74) BS01 dna ? GO:0003964 ... V9H052 37301196
    826593 8ibx:C (3.74) BS02 dna ? GO:0003964 ... V9H052 37301196
    826594 8ibx:C (3.74) BS03 rna ? GO:0003964 ... V9H052 37301196
    826595 8ibx:C (3.74) BS04 ZN ? GO:0003964 ... V9H052 37301196
    826596 8ibx:C (3.74) BS05 ZN ? GO:0003964 ... V9H052 37301196
    826597 8iby:C (3.47) BS01 rna ? GO:0003964 ... V9H052 37301196
    826598 8iby:C (3.47) BS02 ZN ? GO:0003964 ... V9H052 37301196
    826599 8ibz:C (3.04) BS01 rna ? GO:0003964 ... V9H052 37301196
    826600 8ibz:C (3.04) BS02 ZN ? GO:0003964 ... V9H052 37301196

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).