SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    827001 8ie3:P (3.3) BS01 rna ? GO:0002181 ... P62891 37491604
    827002 8ie3:P (3.3) BS02 rna ? GO:0002181 ... P62891 37491604
    827003 8ie3:Q (3.3) BS01 rna ? GO:0001824 ... P26373 37491604
    827004 8ie3:Q (3.3) BS02 rna ? GO:0001824 ... P26373 37491604
    827005 8ie3:R (3.3) BS01 rna ? GO:0000460 ... O95478 37491604
    827006 8ie3:S (3.3) BS01 rna ? GO:0002181 ... P50914 37491604
    827007 8ie3:T (3.3) BS01 rna ? GO:0000027 ... P62913 37491604
    827008 8ie3:T (3.3) BS02 rna ? GO:0000027 ... P62913 37491604
    827009 8ie3:U (3.3) BS01 rna ? GO:0002181 ... P61313 37491604
    827010 8ie3:U (3.3) BS02 rna ? GO:0002181 ... P61313 37491604
    827011 8ie3:V (3.3) BS01 rna ? GO:0002181 ... P40429 37491604
    827012 8ie3:X (3.3) BS01 rna ? GO:0002181 ... P61513 37491604
    827013 8ie3:Y (3.3) BS01 rna ? GO:0002181 ... P18621 37491604
    827014 8ie3:Y (3.3) BS02 rna ? GO:0002181 ... P18621 37491604
    827015 8ie3:Z (3.3) BS01 rna ? GO:0002181 ... Q07020 37491604
    827016 8ie3:a (3.3) BS01 rna ? GO:0002181 ... P84098 37491604
    827017 8ie3:b (3.3) BS01 rna ? GO:0002181 ... Q02543 37491604
    827018 8ie3:b (3.3) BS02 rna ? GO:0002181 ... Q02543 37491604
    827019 8ie3:c (3.3) BS01 rna ? GO:0002181 ... P46778 37491604
    827020 8ie3:c (3.3) BS02 rna ? GO:0002181 ... P46778 37491604
    827021 8ie3:d (3.3) BS01 rna ? GO:0002181 ... P35268 37491604
    827022 8ie3:e (3.3) BS01 rna ? GO:0000122 ... P62829 37491604
    827023 8ie3:g (3.3) BS01 rna ? GO:0002181 ... P62750 37491604
    827024 8ie3:g (3.3) BS02 rna ? GO:0002181 ... P62750 37491604
    827025 8ie3:h (3.3) BS01 rna ? GO:0002181 ... P61254 37491604
    827026 8ie3:h (3.3) BS02 rna ? GO:0002181 ... P61254 37491604
    827027 8ie3:i (3.3) BS01 rna ? GO:0002181 ... P61353 37491604
    827028 8ie3:j (3.3) BS01 rna ? GO:0002181 ... P62899 37491604
    827029 8ie3:k (3.3) BS01 rna ? GO:0002181 ... P62910 37491604
    827030 8ie3:l (3.3) BS01 rna ? GO:0002181 ... P46779 37491604
    827031 8ie3:m (3.3) BS01 rna ? GO:0002181 ... P62917 37491604
    827032 8ie3:n (3.3) BS01 rna ? GO:0000049 ... P18077 37491604
    827033 8ie3:o (3.3) BS01 rna ? GO:0002181 ... Q02878 37491604
    827034 8ie3:p (3.3) BS01 rna ? GO:0000463 ... P18124 37491604
    827035 8ie3:p (3.3) BS02 rna ? GO:0000463 ... P18124 37491604
    827036 8ie3:r (3.3) BS01 rna ? GO:0000027 ... P46777 37491604
    827037 8ie3:r (3.3) BS02 rna ? GO:0000027 ... P46777 37491604
    827038 8ie3:z (3.3) BS01 rna ? GO:0001099 ... Q9BRT6 37491604
    827039 8ie5:A (1.803) BS01 EZE 2.7.11.1 GO:0004672 ... P53355 37171222
    827040 8ie6:A (1.701) BS01 8KZ 2.7.11.1 GO:0004672 ... P53355 37171222
    827041 8ie7:A (1.849) BS01 3RL 2.7.11.1 GO:0004672 ... P53355 37171222
    827042 8ie8:A (1.75) BS01 P5O 2.7.11.1 GO:0004672 ... P53355 37171222
    827043 8ieg:A (3.44) BS01 ZN 2.3.2.27 GO:0004842 ... Q07457 37633270
    827044 8ieg:A (3.44) BS02 ZN 2.3.2.27 GO:0004842 ... Q07457 37633270
    827045 8ieg:B (3.44) BS01 ZN 2.3.2.27 GO:0004842 ... Q07457 37633270
    827046 8ieg:B (3.44) BS02 ZN 2.3.2.27 GO:0004842 ... Q07457 37633270
    827047 8ieg:C (3.44) BS01 dna ? GO:0000786 ... P04908 37633270
    827048 8ieg:C (3.44) BS02 dna ? GO:0000786 ... P04908 37633270
    827049 8ieg:D (3.44) BS01 dna ? GO:0000786 ... O60814 37633270
    827050 8ieg:D (3.44) BS02 dna ? GO:0000786 ... O60814 37633270
    827051 8ieg:E (3.44) BS01 dna ? GO:0000786 ... P68431 37633270
    827052 8ieg:E (3.44) BS02 dna ? GO:0000786 ... P68431 37633270
    827053 8ieg:F (3.44) BS01 dna ? GO:0003677 ... P62805 37633270
    827054 8ieg:F (3.44) BS02 dna ? GO:0003677 ... P62805 37633270
    827055 8ieg:G (3.44) BS01 dna ? GO:0000786 ... P04908 37633270
    827056 8ieg:G (3.44) BS02 dna ? GO:0000786 ... P04908 37633270
    827057 8ieg:H (3.44) BS01 dna ? GO:0000786 ... O60814 37633270
    827058 8ieg:H (3.44) BS02 dna ? GO:0000786 ... O60814 37633270
    827059 8ieg:K (3.44) BS01 dna ? GO:0000786 ... P68431 37633270
    827060 8ieg:K (3.44) BS02 dna ? GO:0000786 ... P68431 37633270
    827061 8ieg:L (3.44) BS01 dna ? GO:0003677 ... P62805 37633270
    827062 8ieg:L (3.44) BS02 dna ? GO:0003677 ... P62805 37633270
    827063 8iej:A (3.12) BS01 ZN 2.3.2.27 GO:0004842 ... O75150 37633270
    827064 8iej:A (3.12) BS02 ZN 2.3.2.27 GO:0004842 ... O75150 37633270
    827065 8iej:C (3.12) BS01 dna ? GO:0000786 ... P04908 37633270
    827066 8iej:C (3.12) BS02 dna ? GO:0000786 ... P04908 37633270
    827067 8iej:D (3.12) BS01 dna ? GO:0000786 ... O60814 37633270
    827068 8iej:D (3.12) BS02 dna ? GO:0000786 ... O60814 37633270
    827069 8iej:E (3.12) BS01 dna ? GO:0000786 ... P68431 37633270
    827070 8iej:E (3.12) BS02 dna ? GO:0000786 ... P68431 37633270
    827071 8iej:F (3.12) BS01 dna ? GO:0003677 ... P62805 37633270
    827072 8iej:F (3.12) BS02 dna ? GO:0003677 ... P62805 37633270
    827073 8iej:G (3.12) BS01 dna ? GO:0000786 ... P04908 37633270
    827074 8iej:G (3.12) BS02 dna ? GO:0000786 ... P04908 37633270
    827075 8iej:H (3.12) BS01 dna ? GO:0000786 ... O60814 37633270
    827076 8iej:K (3.12) BS01 dna ? GO:0000786 ... P68431 37633270
    827077 8iej:K (3.12) BS02 dna ? GO:0000786 ... P68431 37633270
    827078 8iej:L (3.12) BS01 dna ? GO:0003677 ... P62805 37633270
    827079 8iej:L (3.12) BS02 dna ? GO:0003677 ... P62805 37633270
    827080 8iej:M (3.12) BS01 ZN 2.3.2.27 GO:0004842 ... Q5VTR2 37633270
    827081 8iej:M (3.12) BS02 ZN 2.3.2.27 GO:0004842 ... Q5VTR2 37633270
    827082 8iek:P (3.2) BS01 ATP 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827083 8iem:P (3.35) BS01 MG 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827084 8iem:P (3.35) BS02 BEF 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827085 8ien:P (3.25) BS01 MG 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827086 8ien:P (3.25) BS02 ALF 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827087 8ieo:P (3.78) BS01 ALF 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827088 8ieo:P (3.78) BS02 MG 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827089 8ies:P (3.73) BS01 ALF 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827090 8ies:P (3.73) BS02 MG 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827091 8ies:P (3.73) BS03 ADP 7.6.2.- GO:0000166 ... Q9NQ11 37031211
    827092 8iew:A (3.1) BS01 rna N/A N/A N/A N/A
    827093 8iew:A (3.1) BS02 dna N/A N/A N/A N/A
    827094 8iew:A (3.1) BS03 dna N/A N/A N/A N/A
    827095 8iex:A (-1.00) BS01 ZN ? GO:0003700 ... Q9SV15 36868077
    827096 8iey:A (2.0) BS01 FE 2.3.1.234 GO:0002949 ... O66986 39510188
    827097 8if1:A () BS01 peptide ? N/A N/A N/A
    827098 8if1:C () BS01 peptide ? N/A N/A N/A
    827099 8if1:G () BS01 peptide ? N/A N/A N/A
    827100 8if2:A (2.78) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37169744
    827101 8if2:B (2.78) BS01 MAN ? N/A P0DTC2 37169744
    827102 8if3:A (3.23) BS01 8X9 ? N/A P54289 36933823
    827103 8if7:A (2.2) BS01 P1T ? GO:0044272 ... A6YEH3 37405487
    827104 8if8:B (3.1) BS01 CA 2.4.2.46 GO:0005886 ... P9WN03 37252995
    827105 8if8:C (3.1) BS01 CA 2.4.2.46 GO:0005886 ... P9WN03 37252995
    827106 8ifb:0 (2.43) BS01 rna ? GO:0000027 ... P0A7N9 38227611
    827107 8ifb:1 (2.43) BS01 rna ? GO:0002181 ... P0A7P5 38227611
    827108 8ifb:2 (2.43) BS01 rna ? GO:0002181 ... P0A7Q1 38227611
    827109 8ifb:3 (2.43) BS01 rna ? GO:0002181 ... P0A7Q6 38227611
    827110 8ifb:3 (2.43) BS02 ZN ? GO:0002181 ... P0A7Q6 38227611
    827111 8ifb:4 (2.43) BS01 rna ? GO:0002181 ... P0A7M9 38227611
    827112 8ifb:4 (2.43) BS02 rna ? GO:0002181 ... P0A7M9 38227611
    827113 8ifb:4 (2.43) BS03 ZN ? GO:0002181 ... P0A7M9 38227611
    827114 8ifb:B (2.43) BS01 rna ? GO:0000028 ... P0A7V0 38227611
    827115 8ifb:C (2.43) BS01 rna ? GO:0000028 ... P0A7V3 38227611
    827116 8ifb:C (2.43) BS02 MG ? GO:0000028 ... P0A7V3 38227611
    827117 8ifb:D (2.43) BS01 rna ? GO:0000028 ... P0A7V8 38227611
    827118 8ifb:E (2.43) BS01 rna ? GO:0000028 ... P0A7W1 38227611
    827119 8ifb:F (2.43) BS01 rna ? GO:0002181 ... P02358 38227611
    827120 8ifb:G (2.43) BS01 rna ? GO:0000028 ... P02359 38227611
    827121 8ifb:H (2.43) BS01 rna ? GO:0000028 ... P0A7W7 38227611
    827122 8ifb:I (2.43) BS01 rna ? GO:0000049 ... P0A7X3 38227611
    827123 8ifb:I (2.43) BS02 rna ? GO:0000049 ... P0A7X3 38227611
    827124 8ifb:J (2.43) BS01 rna ? GO:0000049 ... P0A7R5 38227611
    827125 8ifb:K (2.43) BS01 rna ? GO:0002181 ... P0A7R9 38227611
    827126 8ifb:L (2.43) BS01 rna ? GO:0000049 ... P0A7S3 38227611
    827127 8ifb:M (2.43) BS01 rna ? GO:0000049 ... P0A7S9 38227611
    827128 8ifb:M (2.43) BS02 MG ? GO:0000049 ... P0A7S9 38227611
    827129 8ifb:N (2.43) BS01 rna ? GO:0000028 ... P0AG59 38227611
    827130 8ifb:O (2.43) BS01 rna ? GO:0000028 ... P0ADZ4 38227611
    827131 8ifb:O (2.43) BS02 rna ? GO:0000028 ... P0ADZ4 38227611
    827132 8ifb:P (2.43) BS01 rna ? GO:0000028 ... P0A7T3 38227611
    827133 8ifb:Q (2.43) BS01 rna ? GO:0000028 ... P0AG63 38227611
    827134 8ifb:R (2.43) BS01 rna ? GO:0002181 ... P0A7T7 38227611
    827135 8ifb:S (2.43) BS01 rna ? GO:0000028 ... P0A7U3 38227611
    827136 8ifb:T (2.43) BS01 rna ? GO:0000028 ... P0A7U7 38227611
    827137 8ifb:U (2.43) BS01 rna ? GO:0000028 ... P68679 38227611
    827138 8ifb:c (2.43) BS01 rna ? GO:0000027 ... P60422 38227611
    827139 8ifb:c (2.43) BS02 MG ? GO:0000027 ... P60422 38227611
    827140 8ifb:c (2.43) BS03 MG ? GO:0000027 ... P60422 38227611
    827141 8ifb:d (2.43) BS01 rna ? GO:0000027 ... P60438 38227611
    827142 8ifb:d (2.43) BS02 MG ? GO:0000027 ... P60438 38227611
    827143 8ifb:d (2.43) BS03 MG ? GO:0000027 ... P60438 38227611
    827144 8ifb:d (2.43) BS04 MG ? GO:0000027 ... P60438 38227611
    827145 8ifb:d (2.43) BS05 MG ? GO:0000027 ... P60438 38227611
    827146 8ifb:e (2.43) BS01 rna ? GO:0001070 ... P60723 38227611
    827147 8ifb:f (2.43) BS01 rna ? GO:0000027 ... P62399 38227611
    827148 8ifb:f (2.43) BS02 rna ? GO:0000027 ... P62399 38227611
    827149 8ifb:f (2.43) BS03 rna ? GO:0000027 ... P62399 38227611
    827150 8ifb:g (2.43) BS01 rna ? GO:0000027 ... P0AG55 38227611
    827151 8ifb:h (2.43) BS01 rna ? GO:0002181 ... P0A7R1 38227611
    827152 8ifb:i (2.43) BS01 rna ? GO:0002181 ... P0AA10 38227611
    827153 8ifb:j (2.43) BS01 rna ? GO:0002181 ... P0ADY3 38227611
    827154 8ifb:j (2.43) BS02 rna ? GO:0002181 ... P0ADY3 38227611
    827155 8ifb:k (2.43) BS01 rna ? GO:0002181 ... P02413 38227611
    827156 8ifb:l (2.43) BS01 rna ? GO:0000027 ... P0ADY7 38227611
    827157 8ifb:l (2.43) BS02 rna ? GO:0000027 ... P0ADY7 38227611
    827158 8ifb:l (2.43) BS03 rna ? GO:0000027 ... P0ADY7 38227611
    827159 8ifb:l (2.43) BS04 MG ? GO:0000027 ... P0ADY7 38227611
    827160 8ifb:m (2.43) BS01 rna ? GO:0000027 ... P0AG44 38227611
    827161 8ifb:n (2.43) BS01 rna ? GO:0002181 ... P0C018 38227611
    827162 8ifb:n (2.43) BS02 rna ? GO:0002181 ... P0C018 38227611
    827163 8ifb:o (2.43) BS01 rna ? GO:0000027 ... P0A7K6 38227611
    827164 8ifb:o (2.43) BS02 rna ? GO:0000027 ... P0A7K6 38227611
    827165 8ifb:p (2.43) BS01 rna ? GO:0000027 ... P0A7L3 38227611
    827166 8ifb:q (2.43) BS01 rna ? GO:0002181 ... P0AG48 38227611
    827167 8ifb:r (2.43) BS01 rna ? GO:0002181 ... P61175 38227611
    827168 8ifb:s (2.43) BS01 rna ? GO:0000027 ... P0ADZ0 38227611
    827169 8ifb:t (2.43) BS01 rna ? GO:0000027 ... P60624 38227611
    827170 8ifb:u (2.43) BS01 rna ? GO:0000027 ... P68919 38227611
    827171 8ifb:v (2.43) BS01 rna ? GO:0000027 ... P0A7L8 38227611
    827172 8ifb:v (2.43) BS02 rna ? GO:0000027 ... P0A7L8 38227611
    827173 8ifb:w (2.43) BS01 rna ? GO:0000027 ... P0A7M2 38227611
    827174 8ifb:x (2.43) BS01 rna ? GO:0000027 ... P0A7M6 38227611
    827175 8ifb:y (2.43) BS01 rna ? GO:0000027 ... P0AG51 38227611
    827176 8ifb:y (2.43) BS02 rna ? GO:0000027 ... P0AG51 38227611
    827177 8ifb:z (2.43) BS01 rna ? GO:0000027 ... P0A7N4 38227611
    827178 8ifb:z (2.43) BS02 MG ? GO:0000027 ... P0A7N4 38227611
    827179 8ifc:0 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 38227611
    827180 8ifc:1 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 38227611
    827181 8ifc:2 (2.9) BS01 rna ? GO:0002181 ... P0A7Q1 38227611
    827182 8ifc:3 (2.9) BS01 rna ? GO:0002181 ... P0A7Q6 38227611
    827183 8ifc:3 (2.9) BS02 ZN ? GO:0002181 ... P0A7Q6 38227611
    827184 8ifc:4 (2.9) BS01 rna ? GO:0002181 ... P0A7M9 38227611
    827185 8ifc:4 (2.9) BS02 rna ? GO:0002181 ... P0A7M9 38227611
    827186 8ifc:4 (2.9) BS03 MG ? GO:0002181 ... P0A7M9 38227611
    827187 8ifc:B (2.9) BS01 rna ? GO:0000028 ... P0A7V0 38227611
    827188 8ifc:C (2.9) BS01 rna ? GO:0000028 ... P0A7V3 38227611
    827189 8ifc:D (2.9) BS01 rna ? GO:0000028 ... P0A7V8 38227611
    827190 8ifc:E (2.9) BS01 rna ? GO:0000028 ... P0A7W1 38227611
    827191 8ifc:F (2.9) BS01 rna ? GO:0002181 ... P02358 38227611
    827192 8ifc:G (2.9) BS01 rna ? GO:0000028 ... P02359 38227611
    827193 8ifc:H (2.9) BS01 rna ? GO:0000028 ... P0A7W7 38227611
    827194 8ifc:I (2.9) BS01 rna ? GO:0000049 ... P0A7X3 38227611
    827195 8ifc:I (2.9) BS02 rna ? GO:0000049 ... P0A7X3 38227611
    827196 8ifc:J (2.9) BS01 rna ? GO:0000049 ... P0A7R5 38227611
    827197 8ifc:K (2.9) BS01 rna ? GO:0002181 ... P0A7R9 38227611
    827198 8ifc:L (2.9) BS01 rna ? GO:0000049 ... P0A7S3 38227611
    827199 8ifc:M (2.9) BS01 rna ? GO:0000049 ... P0A7S9 38227611
    827200 8ifc:M (2.9) BS02 rna ? GO:0000049 ... P0A7S9 38227611

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).