SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    828001 8ikh:R (3.3) BS01 Q2L ? GO:0004930 ... P21554 38830102
    828002 8ikm:A (1.92) BS01 ZN N/A GO:0004842 ... O60260 39221915
    828003 8ikm:A (1.92) BS02 ZN N/A GO:0004842 ... O60260 39221915
    828004 8ikm:A (1.92) BS03 ZN N/A GO:0004842 ... O60260 39221915
    828005 8ikm:A (1.92) BS04 ZN N/A GO:0004842 ... O60260 39221915
    828006 8ikm:A (1.92) BS05 ZN N/A GO:0004842 ... O60260 39221915
    828007 8ikm:A (1.92) BS06 ZN N/A GO:0004842 ... O60260 39221915
    828008 8ikt:A (2.6) BS01 ZN N/A GO:0004842 ... O60260 39221915
    828009 8ikt:A (2.6) BS02 ZN N/A GO:0004842 ... O60260 39221915
    828010 8ikt:A (2.6) BS03 ZN N/A GO:0004842 ... O60260 39221915
    828011 8ikt:A (2.6) BS04 ZN N/A GO:0004842 ... O60260 39221915
    828012 8ikt:A (2.6) BS05 ZN N/A GO:0004842 ... O60260 39221915
    828013 8ikt:A (2.6) BS06 ZN N/A GO:0004842 ... O60260 39221915
    828014 8ikt:B (2.6) BS01 3CN N/A N/A P62987 39221915
    828015 8ikv:A (2.35) BS01 ZN N/A GO:0004842 ... O60260 39221915
    828016 8ikv:A (2.35) BS02 ZN N/A GO:0004842 ... O60260 39221915
    828017 8ikv:A (2.35) BS03 ZN N/A GO:0004842 ... O60260 39221915
    828018 8ikv:A (2.35) BS04 ZN N/A GO:0004842 ... O60260 39221915
    828019 8ikv:A (2.35) BS05 ZN N/A GO:0004842 ... O60260 39221915
    828020 8ikv:A (2.35) BS06 ZN N/A GO:0004842 ... O60260 39221915
    828021 8ikv:A (2.35) BS07 ZN N/A GO:0004842 ... O60260 39221915
    828022 8ikv:A (2.35) BS08 ZN N/A GO:0004842 ... O60260 39221915
    828023 8ikv:C (2.35) BS01 ZN N/A GO:0004842 ... O60260 39221915
    828024 8ikv:C (2.35) BS02 ZN N/A GO:0004842 ... O60260 39221915
    828025 8ikv:C (2.35) BS03 ZN N/A GO:0004842 ... O60260 39221915
    828026 8ikv:C (2.35) BS04 ZN N/A GO:0004842 ... O60260 39221915
    828027 8ikv:C (2.35) BS05 ZN N/A GO:0004842 ... O60260 39221915
    828028 8ikv:C (2.35) BS06 ZN N/A GO:0004842 ... O60260 39221915
    828029 8ikv:C (2.35) BS07 ZN N/A GO:0004842 ... O60260 39221915
    828030 8ikv:C (2.35) BS08 ZN N/A GO:0004842 ... O60260 39221915
    828031 8ikx:A (1.5) BS01 MAN ? GO:0004553 ... Q9LYJ5 38359129
    828032 8ikz:A (1.75) BS01 MG 4.2.1.9 GO:0003824 ... Q9LIR4 39494391
    828033 8ikz:A (1.75) BS02 FES 4.2.1.9 GO:0003824 ... Q9LIR4 39494391
    828034 8il4:A (3.355) BS01 FAD ? GO:0000166 ... A0A5C3NW19 N/A
    828035 8il4:B (3.355) BS01 FAD ? GO:0000166 ... A0A5C3NW19 N/A
    828036 8il4:C (3.355) BS01 FAD ? GO:0000166 ... A0A5C3NW19 N/A
    828037 8il4:D (3.355) BS01 FAD ? GO:0000166 ... A0A5C3NW19 N/A
    828038 8il5:A (2.50006) BS01 FAD 1.1.3.13 GO:0000166 ... A0A977TIR6 N/A
    828039 8il5:B (2.50006) BS01 FAD 1.1.3.13 GO:0000166 ... A0A977TIR6 N/A
    828040 8il8:A (1.769) BS01 FE2 4.1.2.- GO:0005856 ... A0A0A2N3A3 N/A
    828041 8il8:B (1.769) BS01 FE2 4.1.2.- GO:0005856 ... A0A0A2N3A3 N/A
    828042 8il8:C (1.769) BS01 FE2 4.1.2.- GO:0005856 ... A0A0A2N3A3 N/A
    828043 8il8:D (1.769) BS01 FE2 4.1.2.- GO:0005856 ... A0A0A2N3A3 N/A
    828044 8il9:A (2.16) BS01 FMN 2.7.11.1 N/A A0A1Y1HNG4 39344087
    828045 8ila:A (2.79) BS01 GDP ? GO:0016757 ... A9Y8T1 37272735
    828046 8ila:A (2.79) BS02 Q3L ? GO:0016757 ... A9Y8T1 37272735
    828047 8ila:B (2.79) BS01 GDP ? GO:0016757 ... A9Y8T1 37272735
    828048 8ila:B (2.79) BS02 Q3L ? GO:0016757 ... A9Y8T1 37272735
    828049 8ila:C (2.79) BS01 GDP ? GO:0016757 ... A9Y8T1 37272735
    828050 8ila:C (2.79) BS02 Q3L ? GO:0016757 ... A9Y8T1 37272735
    828051 8ila:D (2.79) BS01 GDP ? GO:0016757 ... A9Y8T1 37272735
    828052 8ila:D (2.79) BS02 Q3L ? GO:0016757 ... A9Y8T1 37272735
    828053 8ild:A (2.25) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828054 8ild:A (2.25) BS02 GTP 2.7.7.7 GO:0003677 ... P42494 37958741
    828055 8ild:A (2.25) BS03 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828056 8ild:B (2.25) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828057 8ild:B (2.25) BS02 GTP 2.7.7.7 GO:0003677 ... P42494 37958741
    828058 8ild:B (2.25) BS03 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828059 8ile:A (3.0) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828060 8ile:A (3.0) BS02 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828061 8ile:A (3.0) BS03 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828062 8ile:A (3.0) BS04 7Q6 2.7.7.7 GO:0003677 ... P42494 37958741
    828063 8ile:B (3.0) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828064 8ile:B (3.0) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828065 8ile:B (3.0) BS03 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828066 8ile:B (3.0) BS04 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828067 8ile:B (3.0) BS05 7Q6 2.7.7.7 GO:0003677 ... P42494 37958741
    828068 8ilf:A (2.3) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828069 8ilf:A (2.3) BS02 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828070 8ilf:A (2.3) BS03 7Q6 2.7.7.7 GO:0003677 ... P42494 37958741
    828071 8ilf:B (2.3) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828072 8ilf:B (2.3) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828073 8ilf:B (2.3) BS03 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828074 8ilf:B (2.3) BS04 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828075 8ilf:B (2.3) BS05 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828076 8ilf:B (2.3) BS06 7Q6 2.7.7.7 GO:0003677 ... P42494 37958741
    828077 8ilg:A (1.805) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828078 8ilg:A (1.805) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828079 8ilg:A (1.805) BS03 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828080 8ilg:B (1.805) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828081 8ilg:B (1.805) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828082 8ilg:B (1.805) BS03 MN 2.7.7.7 GO:0003677 ... P42494 37958741
    828083 8ilh:A (2.1) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828084 8ilh:A (2.1) BS02 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828085 8ilh:A (2.1) BS03 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828086 8ilh:A (2.1) BS04 GMS 2.7.7.7 GO:0003677 ... P42494 37958741
    828087 8ilh:B (2.1) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828088 8ilh:B (2.1) BS02 8EB 2.7.7.7 GO:0003677 ... P42494 37958741
    828089 8ilh:B (2.1) BS03 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828090 8ilh:B (2.1) BS04 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828091 8ilh:C (2.1) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828092 8ilh:C (2.1) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828093 8ilh:C (2.1) BS03 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828094 8ilh:C (2.1) BS04 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828095 8ilh:C (2.1) BS05 GMS 2.7.7.7 GO:0003677 ... P42494 37958741
    828096 8ilh:D (2.1) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828097 8ilh:D (2.1) BS02 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828098 8ilh:D (2.1) BS03 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828099 8ilh:D (2.1) BS04 GMS 2.7.7.7 GO:0003677 ... P42494 37958741
    828100 8ili:A (1.9) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828101 8ili:A (1.9) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828102 8ili:A (1.9) BS03 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828103 8ili:A (1.9) BS04 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828104 8ili:B (1.9) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828105 8ili:B (1.9) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828106 8ili:B (1.9) BS03 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828107 8ili:B (1.9) BS04 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828108 8ili:C (1.9) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828109 8ili:C (1.9) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828110 8ili:C (1.9) BS03 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828111 8ili:C (1.9) BS04 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828112 8ili:D (1.9) BS01 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828113 8ili:D (1.9) BS02 dna 2.7.7.7 GO:0003677 ... P42494 37958741
    828114 8ili:D (1.9) BS03 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828115 8ili:D (1.9) BS04 MG 2.7.7.7 GO:0003677 ... P42494 37958741
    828116 8ill:B (2.2) BS01 GLC N/A GO:0006091 ... N/A 38036853
    828117 8ilr:A (3.05) BS01 7TZ 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37585458
    828118 8ils:A (3.1) BS01 7U5 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37585458
    828119 8ilu:A (1.8) BS01 Q1L ? GO:0030246 ... P16110 38394996
    828120 8ilu:B (1.8) BS01 Q1L ? GO:0030246 ... P16110 38394996
    828121 8ilv:A (3.19) BS01 L2V 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37585458
    828122 8ilw:C (2.712) BS01 dna ? GO:0000981 ... Q8TE12 N/A
    828123 8ilw:C (2.712) BS02 dna ? GO:0000981 ... Q8TE12 N/A
    828124 8im2:A (2.81) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828125 8im2:A (2.81) BS02 NTD 1.13.11.27 GO:0000139 ... P32754 37794595
    828126 8im2:B (2.81) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828127 8im2:B (2.81) BS02 NTD 1.13.11.27 GO:0000139 ... P32754 37794595
    828128 8im2:C (2.81) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828129 8im2:C (2.81) BS02 NTD 1.13.11.27 GO:0000139 ... P32754 37794595
    828130 8im2:D (2.81) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828131 8im2:D (2.81) BS02 NTD 1.13.11.27 GO:0000139 ... P32754 37794595
    828132 8im2:E (2.81) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828133 8im2:E (2.81) BS02 NTD 1.13.11.27 GO:0000139 ... P32754 37794595
    828134 8im2:F (2.81) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828135 8im2:F (2.81) BS02 NTD 1.13.11.27 GO:0000139 ... P32754 37794595
    828136 8im3:A (2.78) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828137 8im3:A (2.78) BS02 92U 1.13.11.27 GO:0000139 ... P32754 37794595
    828138 8im3:B (2.78) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828139 8im3:B (2.78) BS02 92U 1.13.11.27 GO:0000139 ... P32754 37794595
    828140 8im3:C (2.78) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828141 8im3:C (2.78) BS02 92U 1.13.11.27 GO:0000139 ... P32754 37794595
    828142 8im3:D (2.78) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828143 8im3:D (2.78) BS02 92U 1.13.11.27 GO:0000139 ... P32754 37794595
    828144 8im3:E (2.78) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828145 8im3:E (2.78) BS02 92U 1.13.11.27 GO:0000139 ... P32754 37794595
    828146 8im3:F (2.78) BS01 CO 1.13.11.27 GO:0000139 ... P32754 37794595
    828147 8im3:F (2.78) BS02 92U 1.13.11.27 GO:0000139 ... P32754 37794595
    828148 8im5:A (-1.00) BS01 ZN 2.3.2.31 N/A Q9WUB0 37595872
    828149 8im6:A (2.01) BS01 80I 2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6X1 36965419
    828150 8im6:B (2.01) BS01 80I 2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6X1 36965419
    828151 8im7:C (3.4) BS01 CLR ? GO:0000139 ... Q96BI3 37759382
    828152 8im7:C (3.4) BS02 CLR ? GO:0000139 ... Q96BI3 37759382
    828153 8im8:A (2.7) BS01 CA 3.2.1.1 GO:0004556 ... P25718 37241718
    828154 8im8:A (2.7) BS02 CA 3.2.1.1 GO:0004556 ... P25718 37241718
    828155 8im8:B (2.7) BS01 CA 3.2.1.1 GO:0004556 ... P25718 37241718
    828156 8im8:B (2.7) BS02 CA 3.2.1.1 GO:0004556 ... P25718 37241718
    828157 8im8:C (2.7) BS01 CA 3.2.1.1 GO:0004556 ... P25718 37241718
    828158 8im8:C (2.7) BS02 CA 3.2.1.1 GO:0004556 ... P25718 37241718
    828159 8im8:D (2.7) BS01 CA 3.2.1.1 GO:0004556 ... P25718 37241718
    828160 8im8:D (2.7) BS02 CA 3.2.1.1 GO:0004556 ... P25718 37241718
    828161 8imd:A (1.45) BS01 CU N/A GO:0005507 ... N/A 37442237
    828162 8imd:A (1.45) BS02 ZN N/A GO:0005507 ... N/A 37442237
    828163 8imd:B (1.45) BS01 CU N/A GO:0005507 ... N/A 37442237
    828164 8imd:B (1.45) BS02 ZN N/A GO:0005507 ... N/A 37442237
    828165 8ime:A (2.63) BS01 0XE 2.7.7.86 N/A Q8N884 37666112
    828166 8ime:A (2.63) BS02 ZN 2.7.7.86 N/A Q8N884 37666112
    828167 8ime:B (2.63) BS01 0XE 2.7.7.86 N/A Q8N884 37666112
    828168 8ime:B (2.63) BS02 ZN 2.7.7.86 N/A Q8N884 37666112
    828169 8imf:A (2.4) BS01 ZN 2.7.7.86 N/A Q8N884 37666112
    828170 8imf:B (2.4) BS01 3WL 2.7.7.86 N/A Q8N884 37666112
    828171 8imf:B (2.4) BS02 ZN 2.7.7.86 N/A Q8N884 37666112
    828172 8img:A (1.8) BS01 ZN 2.7.7.86 N/A Q8N884 37666112
    828173 8img:B (1.8) BS01 7XZ 2.7.7.86 N/A Q8N884 37666112
    828174 8img:B (1.8) BS02 ZN 2.7.7.86 N/A Q8N884 37666112
    828175 8imu:A (1.93) BS01 FES 4.2.1.9 GO:0003824 ... Q9LIR4 39494391
    828176 8imu:B (1.93) BS01 FES 4.2.1.9 GO:0003824 ... Q9LIR4 39494391
    828177 8imx:G (2.85) BS01 MG ? GO:0003923 ... O43292 37684232
    828178 8imx:G (2.85) BS02 Y01 ? GO:0003923 ... O43292 37684232
    828179 8imx:G (2.85) BS03 6OU ? GO:0003923 ... O43292 37684232
    828180 8imx:G (2.85) BS04 6OU ? GO:0003923 ... O43292 37684232
    828181 8imx:G (2.85) BS05 Y01 ? GO:0003923 ... O43292 37684232
    828182 8imx:G (2.85) BS06 Y01 ? GO:0003923 ... O43292 37684232
    828183 8imx:G (2.85) BS07 Y01 ? GO:0003923 ... O43292 37684232
    828184 8imx:G (2.85) BS08 AJP ? GO:0003923 ... O43292 37684232
    828185 8imx:G (2.85) BS09 80Y ? GO:0003923 ... O43292 37684232
    828186 8imx:K (2.85) BS01 peptide 3.-.-.- GO:0003923 ... Q92643 37684232
    828187 8imx:K (2.85) BS02 peptide 3.-.-.- GO:0003923 ... Q92643 37684232
    828188 8imx:K (2.85) BS03 CA 3.-.-.- GO:0003923 ... Q92643 37684232
    828189 8imx:S (2.85) BS01 peptide ? GO:0005515 ... Q96S52 37684232
    828190 8imx:S (2.85) BS02 LBN ? GO:0005515 ... Q96S52 37684232
    828191 8imx:S (2.85) BS03 80T ? GO:0005515 ... Q96S52 37684232
    828192 8imx:T (2.85) BS01 peptide ? GO:0006091 ... Q969N2
    Q9U6Y3
    37684232
    828193 8imx:T (2.85) BS02 81Q ? GO:0006091 ... Q969N2
    Q9U6Y3
    37684232
    828194 8imx:U (2.85) BS01 6OU ? GO:0005515 ... Q9H490 37684232
    828195 8imx:U (2.85) BS02 80T ? GO:0005515 ... Q9H490 37684232
    828196 8imx:U (2.85) BS03 Y01 ? GO:0005515 ... Q9H490 37684232
    828197 8imx:U (2.85) BS04 Y01 ? GO:0005515 ... Q9H490 37684232
    828198 8imx:U (2.85) BS05 Y01 ? GO:0005515 ... Q9H490 37684232
    828199 8imx:U (2.85) BS06 Y01 ? GO:0005515 ... Q9H490 37684232
    828200 8imx:U (2.85) BS07 81Q ? GO:0005515 ... Q9H490 37684232

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).