SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    828401 8i1u:N (3.24) BS02 AF3 ? GO:0003723 ... P40227 38307855
    828402 8i1u:O (3.24) BS01 ADP ? GO:0005515 ... Q99832 38307855
    828403 8i1u:O (3.24) BS02 AF3 ? GO:0005515 ... Q99832 38307855
    828404 8i1u:P (3.24) BS01 ADP ? GO:0002199 ... P50990 38307855
    828405 8i1w:B (1.8) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828406 8i1y:A (1.78) BS01 O7L 6.1.1.2 GO:0000166 ... P00954 37070195
    828407 8i1y:B (1.78) BS01 O7L 6.1.1.2 GO:0000166 ... P00954 37070195
    828408 8i1y:B (1.78) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828409 8i1z:A (1.8) BS01 O7R 6.1.1.2 GO:0000166 ... P00954 37070195
    828410 8i1z:B (1.8) BS01 O7R 6.1.1.2 GO:0000166 ... P00954 37070195
    828411 8i1z:B (1.8) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828412 8i22:A (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    828413 8i22:B (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    828414 8i22:C (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    828415 8i22:D (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    828416 8i22:E (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    828417 8i22:F (2.15) BS01 OBK ? GO:0016877 ... Q00IB3 N/A
    828418 8i23:C (3.03) BS01 dna 2.7.7.6 GO:0003677 ... A3DIZ4 37833284
    828419 8i23:D (3.03) BS01 dna 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828420 8i23:D (3.03) BS02 dna 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828421 8i23:D (3.03) BS03 ZN 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828422 8i23:D (3.03) BS04 ZN 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828423 8i23:D (3.03) BS05 MG 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828424 8i23:F (3.03) BS01 dna ? GO:0003677 ... A3DBH0 37833284
    828425 8i23:F (3.03) BS02 dna ? GO:0003677 ... A3DBH0 37833284
    828426 8i24:C (3.36) BS01 dna 2.7.7.6 GO:0003677 ... A3DIZ4 37833284
    828427 8i24:C (3.36) BS02 dna 2.7.7.6 GO:0003677 ... A3DIZ4 37833284
    828428 8i24:D (3.36) BS01 dna 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828429 8i24:D (3.36) BS02 dna 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828430 8i24:D (3.36) BS03 ZN 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828431 8i24:D (3.36) BS04 ZN 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828432 8i24:D (3.36) BS05 MG 2.7.7.6 GO:0000287 ... A3DIZ5 37833284
    828433 8i24:F (3.36) BS01 dna ? GO:0003677 ... A3DH98 37833284
    828434 8i24:F (3.36) BS02 dna ? GO:0003677 ... A3DH98 37833284
    828435 8i27:A (1.95) BS01 O8C 6.1.1.2 GO:0000166 ... P00954 37070195
    828436 8i27:B (1.95) BS01 O8C 6.1.1.2 GO:0000166 ... P00954 37070195
    828437 8i27:B (1.95) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828438 8i29:A (2.72) BS01 CO 1.1.1.- GO:0005829 ... Q8R612 N/A
    828439 8i29:A (2.72) BS02 NAD 1.1.1.- GO:0005829 ... Q8R612 N/A
    828440 8i2a:A (2.35) BS01 5OB 6.1.1.2 GO:0000166 ... P00954 37070195
    828441 8i2a:B (2.35) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828442 8i2a:B (2.35) BS02 5OB 6.1.1.2 GO:0000166 ... P00954 37070195
    828443 8i2b:A (2.2) BS01 O5L 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 38487000
    828444 8i2b:A (2.2) BS02 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 38487000
    828445 8i2b:A (2.2) BS03 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 38487000
    828446 8i2b:B (2.2) BS01 O5L 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 38487000
    828447 8i2b:B (2.2) BS02 AR6 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 38487000
    828448 8i2b:B (2.2) BS03 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 38487000
    828449 8i2c:A (2.07) BS01 O8U 6.1.1.2 GO:0000166 ... P00954 37070195
    828450 8i2c:B (2.07) BS01 O8U 6.1.1.2 GO:0000166 ... P00954 37070195
    828451 8i2c:B (2.07) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828452 8i2g:R (2.8) BS01 CLR ? GO:0004930 ... P23945 36720854
    828453 8i2g:R (2.8) BS02 CLR ? GO:0004930 ... P23945 36720854
    828454 8i2g:R (2.8) BS03 CLR ? GO:0004930 ... P23945 36720854
    828455 8i2g:R (2.8) BS04 CLR ? GO:0004930 ... P23945 36720854
    828456 8i2g:R (2.8) BS05 CLR ? GO:0004930 ... P23945 36720854
    828457 8i2g:R (2.8) BS06 CLR ? GO:0004930 ... P23945 36720854
    828458 8i2g:R (2.8) BS07 CLR ? GO:0004930 ... P23945 36720854
    828459 8i2g:R (2.8) BS08 CLR ? GO:0004930 ... P23945 36720854
    828460 8i2g:R (2.8) BS09 O6F ? GO:0004930 ... P23945 36720854
    828461 8i2j:A (2.65) BS01 O9F 6.1.1.2 GO:0000166 ... P00954 37070195
    828462 8i2j:B (2.65) BS01 O9F 6.1.1.2 GO:0000166 ... P00954 37070195
    828463 8i2j:B (2.65) BS02 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828464 8i2l:A (1.95) BS01 CLW 6.1.1.2 GO:0000166 ... P00954 37070195
    828465 8i2l:B (1.95) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828466 8i2l:B (1.95) BS02 CLW 6.1.1.2 GO:0000166 ... P00954 37070195
    828467 8i2m:A (2.1) BS01 3JD 6.1.1.2 GO:0000166 ... P00954 37070195
    828468 8i2m:B (2.1) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828469 8i2n:A (2.29) BS01 O4U 2.7.11.1 GO:0004672 ... Q13546 38261830
    828470 8i2n:B (2.29) BS01 O4U 2.7.11.1 GO:0004672 ... Q13546 38261830
    828471 8i2p:A (1.797) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    828472 8i2p:A (1.797) BS02 OAY 1.13.11.27 GO:0003868 ... P93836 N/A
    828473 8i2r:A (1.36) BS01 FRU 2.4.1.10 GO:0009758 ... B2IF78 37280168
    828474 8i2r:A (1.36) BS02 BDF 2.4.1.10 GO:0009758 ... B2IF78 37280168
    828475 8i2r:A (1.36) BS03 BDF 2.4.1.10 GO:0009758 ... B2IF78 37280168
    828476 8i2s:A (1.592) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    828477 8i2s:A (1.592) BS02 T4I 1.13.11.27 GO:0003868 ... P93836 N/A
    828478 8i2u:A (1.989) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    828479 8i2u:A (1.989) BS02 T5I 1.13.11.27 GO:0003868 ... P93836 N/A
    828480 8i2z:A (2.3) BS01 RET ? GO:0005216 ... A0A977XLG0 36859551
    828481 8i2z:A (2.3) BS02 K3I ? GO:0005216 ... A0A977XLG0 36859551
    828482 8i30:A (2.0) BS01 OF9 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37517202
    828483 8i34:A (2.44) BS01 O1U ? N/A A0AA52HX42 37517696
    828484 8i34:A (2.44) BS02 AXT ? N/A A0AA52HX42 37517696
    828485 8i34:B (2.44) BS01 O1U ? GO:0005509 ... A0AA52HX50 37517696
    828486 8i34:B (2.44) BS02 AXT ? GO:0005509 ... A0AA52HX50 37517696
    828487 8i34:C (2.44) BS01 O1U ? N/A A0AA52HX42 37517696
    828488 8i34:C (2.44) BS02 AXT ? N/A A0AA52HX42 37517696
    828489 8i34:D (2.44) BS01 O1U ? GO:0005509 ... A0AA52HX50 37517696
    828490 8i34:D (2.44) BS02 AXT ? GO:0005509 ... A0AA52HX50 37517696
    828491 8i34:E (2.44) BS01 O1U ? N/A A0AA52HX42 37517696
    828492 8i34:E (2.44) BS02 AXT ? N/A A0AA52HX42 37517696
    828493 8i34:F (2.44) BS01 O1U ? GO:0005509 ... A0AA52HX50 37517696
    828494 8i34:F (2.44) BS02 AXT ? GO:0005509 ... A0AA52HX50 37517696
    828495 8i34:G (2.44) BS01 O1U ? N/A A0AA52HX42 37517696
    828496 8i34:G (2.44) BS02 AXT ? N/A A0AA52HX42 37517696
    828497 8i34:H (2.44) BS01 O1U ? GO:0005509 ... A0AA52HX50 37517696
    828498 8i34:H (2.44) BS02 AXT ? GO:0005509 ... A0AA52HX50 37517696
    828499 8i36:A (1.887) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    828500 8i36:A (1.887) BS02 T2I 1.13.11.27 GO:0003868 ... P93836 N/A
    828501 8i39:A (2.85) BS01 A8S ? GO:0005524 ... Q84TH5 37666961
    828502 8i39:B (2.85) BS01 A8S ? GO:0005524 ... Q84TH5 37666961
    828503 8i3a:A (3.04) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    828504 8i3a:A (3.04) BS02 MG ? GO:0005524 ... Q84TH5 37666961
    828505 8i3a:A (3.04) BS03 ATP ? GO:0005524 ... Q84TH5 37666961
    828506 8i3a:B (3.04) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    828507 8i3a:B (3.04) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    828508 8i3a:B (3.04) BS03 MG ? GO:0005524 ... Q84TH5 37666961
    828509 8i3b:A (3.08) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    828510 8i3b:A (3.08) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    828511 8i3b:B (3.08) BS01 ATP ? GO:0005524 ... Q84TH5 37666961
    828512 8i3b:B (3.08) BS02 ATP ? GO:0005524 ... Q84TH5 37666961
    828513 8i3c:A (2.85) BS01 Y01 ? GO:0005524 ... Q84TH5 37666961
    828514 8i3c:A (2.85) BS02 Y01 ? GO:0005524 ... Q84TH5 37666961
    828515 8i3c:B (2.85) BS01 Y01 ? GO:0005524 ... Q84TH5 37666961
    828516 8i3c:B (2.85) BS02 Y01 ? GO:0005524 ... Q84TH5 37666961
    828517 8i3f:B (1.62) BS01 peptide ? N/A Q04779 37236927
    828518 8i3f:B (1.62) BS02 ZN ? N/A Q04779 37236927
    828519 8i3f:B (1.62) BS03 ZN ? N/A Q04779 37236927
    828520 8i3i:A (2.68) BS01 ANP ? GO:0016877 ... Q00IB3 39794554
    828521 8i3i:B (2.68) BS01 ANP ? GO:0016877 ... Q00IB3 39794554
    828522 8i3i:C (2.68) BS01 ANP ? GO:0016877 ... Q00IB3 39794554
    828523 8i3i:D (2.68) BS01 ANP ? GO:0016877 ... Q00IB3 39794554
    828524 8i3n:A (1.73) BS01 ZN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828525 8i3n:B (1.73) BS01 ZN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828526 8i3n:C (1.73) BS01 ZN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828527 8i3n:D (1.73) BS01 ZN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828528 8i3o:A (2.0) BS01 MN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828529 8i3o:B (2.0) BS01 MN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828530 8i3o:C (2.0) BS01 MN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828531 8i3o:D (2.0) BS01 MN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828532 8i3p:A (1.3) BS01 OS0 3.5.4.1 GO:0004131 ... Q12178 N/A
    828533 8i3p:A (1.3) BS02 ZN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828534 8i3p:B (1.3) BS01 OS0 3.5.4.1 GO:0004131 ... Q12178 N/A
    828535 8i3p:B (1.3) BS02 ZN 3.5.4.1 GO:0004131 ... Q12178 N/A
    828536 8i3q:A (3.1) BS01 rna ? N/A A0ACD6B9V5 37729124
    828537 8i3q:A (3.1) BS02 ZN ? N/A A0ACD6B9V5 37729124
    828538 8i3v:A (2.85) BS01 68P N/A GO:0003779 ... P23975 39048818
    828539 8i3x:A (1.78) BS01 ZN ? GO:0004842 ... B8AY66 N/A
    828540 8i3x:A (1.78) BS02 ZN ? GO:0004842 ... B8AY66 N/A
    828541 8i3x:B (1.78) BS01 ZN ? GO:0004842 ... B8AY66 N/A
    828542 8i3x:B (1.78) BS02 ZN ? GO:0004842 ... B8AY66 N/A
    828543 8i3y:A (2.4) BS01 SCA 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828544 8i3y:A (2.4) BS02 CA 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828545 8i3y:B (2.4) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828546 8i3y:C (2.4) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828547 8i3y:D (2.4) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828548 8i40:A (2.79) BS01 COA 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828549 8i40:A (2.79) BS02 ACT 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828550 8i40:C (2.79) BS01 COA 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828551 8i40:D (2.79) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 41556494
    828552 8i49:A (2.41) BS01 ATP ? GO:0016877 ... Q00IB3 39794554
    828553 8i49:B (2.41) BS01 ATP ? GO:0016877 ... Q00IB3 39794554
    828554 8i49:C (2.41) BS01 ATP ? GO:0016877 ... Q00IB3 39794554
    828555 8i49:D (2.41) BS01 ATP ? GO:0016877 ... Q00IB3 39794554
    828556 8i49:E (2.41) BS01 ATP ? GO:0016877 ... Q00IB3 39794554
    828557 8i49:F (2.41) BS01 ATP ? GO:0016877 ... Q00IB3 39794554
    828558 8i4a:A (3.4) BS01 H9F 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 N/A
    828559 8i4c:A (3.08) BS01 PUC 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 N/A
    828560 8i4d:A (1.06) BS01 MAN 4.2.2.- N/A A0A8J0PCK3 38382672
    828561 8i4d:A (1.06) BS02 MAN 4.2.2.- N/A A0A8J0PCK3 38382672
    828562 8i4d:A (1.06) BS03 RAM 4.2.2.- N/A A0A8J0PCK3 38382672
    828563 8i4d:A (1.06) BS04 ACT 4.2.2.- N/A A0A8J0PCK3 38382672
    828564 8i4d:A (1.06) BS05 CA 4.2.2.- N/A A0A8J0PCK3 38382672
    828565 8i4i:A (2.2) BS01 TRP 6.1.1.2 GO:0000166 ... P00954 37070195
    828566 8i4i:B (2.2) BS01 TYM 6.1.1.2 GO:0000166 ... P00954 37070195
    828567 8i4o:A (3.1) BS01 peptide N/A GO:0006091 ... N/A 38034956
    828568 8i4o:C (3.1) BS01 peptide N/A GO:0006091 ... N/A 38034956
    828569 8i4o:E (3.1) BS01 peptide N/A GO:0006091 ... N/A 38034956
    828570 8i4o:G (3.1) BS01 peptide N/A GO:0006091 ... N/A 38034956
    828571 8i4o:I (3.1) BS01 peptide N/A GO:0006091 ... N/A 38034956
    828572 8i4o:K (3.1) BS01 peptide N/A GO:0006091 ... N/A 38034956
    828573 8i4p:A (1.9) BS01 FAD 6.2.1.5 GO:0003995 ... A0A4D5XMK4 N/A
    828574 8i4q:A (1.9) BS01 NAP 1.1.1.44 GO:0004616 ... Q8NQI2 37417004
    828575 8i4q:B (1.9) BS01 NAP 1.1.1.44 GO:0004616 ... Q8NQI2 37417004
    828576 8i4r:A (2.51) BS01 FAD 6.2.1.5 GO:0003995 ... A0A4D5XMK4 N/A
    828577 8i4r:A (2.51) BS02 ACO 6.2.1.5 GO:0003995 ... A0A4D5XMK4 N/A
    828578 8i4s:A (2.2) BS01 OU3 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37257212
    828579 8i4y:A (3.84) BS01 ONF 2.3.1.41 GO:0004312 ... A0A2N9BJK0 36899013
    828580 8i4y:B (3.84) BS01 ONF 2.3.1.41 GO:0004312 ... A0A2N9BJK0 36899013
    828581 8i4z:A (3.97) BS01 ONF 2.3.1.41 GO:0004312 ... A0A2N9BJK0 36899013
    828582 8i51:A (2.76) BS01 AMP ? GO:0016877 ... Q00IB3 39794554
    828583 8i51:A (2.76) BS02 OP3 ? GO:0016877 ... Q00IB3 39794554
    828584 8i51:B (2.76) BS01 AMP ? GO:0016877 ... Q00IB3 39794554
    828585 8i51:B (2.76) BS02 OP3 ? GO:0016877 ... Q00IB3 39794554
    828586 8i51:C (2.76) BS01 AMP ? GO:0016877 ... Q00IB3 39794554
    828587 8i51:C (2.76) BS02 OP3 ? GO:0016877 ... Q00IB3 39794554
    828588 8i51:D (2.76) BS01 AMP ? GO:0016877 ... Q00IB3 39794554
    828589 8i51:D (2.76) BS02 OP3 ? GO:0016877 ... Q00IB3 39794554
    828590 8i51:E (2.76) BS01 AMP ? GO:0016877 ... Q00IB3 39794554
    828591 8i51:E (2.76) BS02 OP3 ? GO:0016877 ... Q00IB3 39794554
    828592 8i51:F (2.76) BS01 AMP ? GO:0016877 ... Q00IB3 39794554
    828593 8i51:F (2.76) BS02 OP3 ? GO:0016877 ... Q00IB3 39794554
    828594 8i52:A (1.58) BS01 ZN 3.5.2.6 GO:0008800 ... Q9K2N0 N/A
    828595 8i52:A (1.58) BS02 ZN 3.5.2.6 GO:0008800 ... Q9K2N0 N/A
    828596 8i52:D (1.58) BS01 ZN 3.5.2.6 GO:0008800 ... Q9K2N0 N/A
    828597 8i52:D (1.58) BS02 ZN 3.5.2.6 GO:0008800 ... Q9K2N0 N/A
    828598 8i52:D (1.58) BS03 OR6 3.5.2.6 GO:0008800 ... Q9K2N0 N/A
    828599 8i54:A (3.95) BS01 rna N/A N/A A0ACD6BAZ4 36917574
    828600 8i54:A (3.95) BS02 dna N/A N/A A0ACD6BAZ4 36917574

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).