SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    828601 8io9:L (2.36) BS03 ANP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828602 8io9:L (2.36) BS04 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828603 8io9:L (2.36) BS05 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828604 8ioa:A (2.63) BS01 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828605 8ioa:A (2.63) BS02 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828606 8ioa:A (2.63) BS03 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828607 8ioa:B (2.63) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828608 8ioa:B (2.63) BS02 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828609 8ioa:B (2.63) BS03 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828610 8ioc:R (2.86) BS01 peptide ? GO:0002027 ... P03435
    P41968
    37524700
    828611 8ioc:R (2.86) BS02 CA ? GO:0002027 ... P03435
    P41968
    37524700
    828612 8iod:R (2.59) BS01 peptide ? GO:0004930 ... P03435
    P33032
    37524700
    828613 8iod:R (2.59) BS02 CA ? GO:0004930 ... P03435
    P33032
    37524700
    828614 8ioe:A (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828615 8ioe:A (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828616 8ioe:B (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828617 8ioe:B (2.86) BS02 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828618 8ioe:B (2.86) BS03 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828619 8ioe:C (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828620 8ioe:C (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828621 8ioe:D (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828622 8ioe:D (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828623 8ioe:E (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828624 8ioe:E (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828625 8ioe:F (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828626 8ioe:F (2.86) BS02 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828627 8ioe:F (2.86) BS03 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828628 8ioe:G (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828629 8ioe:G (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828630 8ioe:H (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828631 8ioe:H (2.86) BS02 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828632 8ioe:H (2.86) BS03 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828633 8ioe:I (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828634 8ioe:I (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828635 8ioe:J (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828636 8ioe:J (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828637 8ioe:K (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828638 8ioe:K (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828639 8ioe:L (2.86) BS01 TPP 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828640 8ioe:L (2.86) BS02 MG 4.1.2.- GO:0005975 ... Q31LF9 37349485
    828641 8iof:A (2.33) BS01 87I 4.1.99.11 GO:0003824 ... A0A0F0CL90 N/A
    828642 8iof:B (2.33) BS01 87I 4.1.99.11 GO:0003824 ... A0A0F0CL90 N/A
    828643 8iof:C (2.33) BS01 87I 4.1.99.11 GO:0003824 ... A0A0F0CL90 N/A
    828644 8iof:D (2.33) BS01 87I 4.1.99.11 GO:0003824 ... A0A0F0CL90 N/A
    828645 8iog:A (2.88) BS01 HEM ? GO:0005739 ... P24964 N/A
    828646 8iog:A (2.88) BS02 HEM ? GO:0005739 ... P24964 N/A
    828647 8iog:B (2.88) BS01 HEC ? GO:0005739 ... A0A287AZF9 N/A
    828648 8iog:C (2.88) BS01 FES 7.1.1.8 GO:0008121 ... F1RNZ1 N/A
    828649 8iog:a (2.88) BS01 HEM ? GO:0005739 ... P24964 N/A
    828650 8iog:a (2.88) BS02 HEM ? GO:0005739 ... P24964 N/A
    828651 8iog:b (2.88) BS01 HEC ? GO:0005739 ... A0A287AZF9 N/A
    828652 8iog:c (2.88) BS01 FES 7.1.1.8 GO:0008121 ... F1RNZ1 N/A
    828653 8iok:A (1.991) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    828654 8iok:A (1.991) BS02 SYI 1.13.11.27 GO:0003868 ... P93836 N/A
    828655 8ioo:A (2.0) BS01 MG ? GO:0003676 ... Q9RW43 38804263
    828656 8ioo:A (2.0) BS02 MG ? GO:0003676 ... Q9RW43 38804263
    828657 8ioo:B (2.0) BS01 MG ? GO:0003676 ... Q9RW43 38804263
    828658 8ioo:B (2.0) BS02 MG ? GO:0003676 ... Q9RW43 38804263
    828659 8ioo:C (2.0) BS01 MG ? GO:0003676 ... Q9RW43 38804263
    828660 8ioo:C (2.0) BS02 MG ? GO:0003676 ... Q9RW43 38804263
    828661 8iou:D (3.18) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37193706
    828662 8iov:A (3.29) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37193706
    828663 8iow:I (3.2) BS01 peptide ? GO:0004896 ... P08887 38393945
    828664 8iox:A (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828665 8iox:A (2.95) BS02 GLC ? GO:0003824 ... P40120 37735577
    828666 8iox:C (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828667 8iox:D (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828668 8iox:E (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828669 8iox:E (2.95) BS02 GLC ? GO:0003824 ... P40120 37735577
    828670 8iox:F (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828671 8iox:G (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828672 8iox:G (2.95) BS02 GLC ? GO:0003824 ... P40120 37735577
    828673 8iox:H (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828674 8iox:I (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828675 8iox:J (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828676 8iox:K (2.95) BS01 GLC ? GO:0003824 ... P40120 37735577
    828677 8ioy:A (4.0) BS01 ANP 7.2.2.8 GO:0000139 ... P35670 37074913
    828678 8ip0:A (3.6) BS01 rna ? GO:0051607 ... A0A068N1Y0 38750051
    828679 8ip0:B (3.6) BS01 rna ? N/A A0A068N458 38750051
    828680 8ip0:B (3.6) BS02 dna ? N/A A0A068N458 38750051
    828681 8ip0:C (3.6) BS01 rna ? N/A A0A068N458 38750051
    828682 8ip0:C (3.6) BS02 dna ? N/A A0A068N458 38750051
    828683 8ip0:D (3.6) BS01 rna ? N/A A0A068N458 38750051
    828684 8ip0:D (3.6) BS02 dna ? N/A A0A068N458 38750051
    828685 8ip0:H (3.6) BS01 rna ? N/A A0A068N458 38750051
    828686 8ip0:H (3.6) BS02 dna ? N/A A0A068N458 38750051
    828687 8ip0:I (3.6) BS01 rna ? N/A A0A068N458 38750051
    828688 8ip0:I (3.6) BS02 dna ? N/A A0A068N458 38750051
    828689 8ip0:J (3.6) BS01 dna ? N/A A0A068N831 38750051
    828690 8ip0:J (3.6) BS02 dna ? N/A A0A068N831 38750051
    828691 8ip0:K (3.6) BS01 dna ? N/A A0A068N831 38750051
    828692 8ip0:L (3.6) BS01 dna ? N/A A0A068N831 38750051
    828693 8ip0:N (3.6) BS01 rna ? N/A A0A068N458 38750051
    828694 8ip0:N (3.6) BS02 dna ? N/A A0A068N458 38750051
    828695 8ip0:O (3.6) BS01 rna ? N/A A0A068N458 38750051
    828696 8ip1:A (2.06) BS01 BGC ? GO:0003824 ... P40120 37735577
    828697 8ip1:A (2.06) BS02 BGC ? GO:0003824 ... P40120 37735577
    828698 8ip1:A (2.06) BS03 BGC ? GO:0003824 ... P40120 37735577
    828699 8ip1:A (2.06) BS04 BGC ? GO:0003824 ... P40120 37735577
    828700 8ip1:A (2.06) BS05 BGC ? GO:0003824 ... P40120 37735577
    828701 8ip1:A (2.06) BS06 BGC ? GO:0003824 ... P40120 37735577
    828702 8ip1:A (2.06) BS07 BGC ? GO:0003824 ... P40120 37735577
    828703 8ip1:B (2.06) BS01 BGC ? GO:0003824 ... P40120 37735577
    828704 8ip1:B (2.06) BS02 BGC ? GO:0003824 ... P40120 37735577
    828705 8ip1:B (2.06) BS03 BGC ? GO:0003824 ... P40120 37735577
    828706 8ip1:B (2.06) BS04 BGC ? GO:0003824 ... P40120 37735577
    828707 8ip1:B (2.06) BS05 BGC ? GO:0003824 ... P40120 37735577
    828708 8ip1:B (2.06) BS06 BGC ? GO:0003824 ... P40120 37735577
    828709 8ip1:B (2.06) BS07 BGC ? GO:0003824 ... P40120 37735577
    828710 8ip1:B (2.06) BS08 BGC ? GO:0003824 ... P40120 37735577
    828711 8ip2:A (1.81) BS01 BGC ? GO:0003824 ... P33136 37735577
    828712 8ip2:A (1.81) BS02 BGC ? GO:0003824 ... P33136 37735577
    828713 8ip2:A (1.81) BS03 BGC ? GO:0003824 ... P33136 37735577
    828714 8ip2:A (1.81) BS04 BGC ? GO:0003824 ... P33136 37735577
    828715 8ip2:A (1.81) BS05 BGC ? GO:0003824 ... P33136 37735577
    828716 8ip2:A (1.81) BS06 BGC ? GO:0003824 ... P33136 37735577
    828717 8ip2:A (1.81) BS07 BGC ? GO:0003824 ... P33136 37735577
    828718 8ip2:A (1.81) BS08 BGC ? GO:0003824 ... P33136 37735577
    828719 8ip2:A (1.81) BS09 BGC ? GO:0003824 ... P33136 37735577
    828720 8ip8:AA (2.9) BS01 rna ? GO:0000470 ... A0A3B6RED0 38267667
    828721 8ip8:AA (2.9) BS02 rna ? GO:0000470 ... A0A3B6RED0 38267667
    828722 8ip8:AB (2.9) BS01 rna ? GO:0002181 ... Q5I7L5 38267667
    828723 8ip8:BA (2.9) BS01 rna ? GO:0003735 ... F4YWL9 38267667
    828724 8ip8:BA (2.9) BS02 rna ? GO:0003735 ... F4YWL9 38267667
    828725 8ip8:BB (2.9) BS01 rna ? GO:0000463 ... Q8L805 38267667
    828726 8ip8:BB (2.9) BS02 rna ? GO:0000463 ... Q8L805 38267667
    828727 8ip8:CA (2.9) BS01 rna ? GO:0003735 ... A0A341XZK6 38267667
    828728 8ip8:CB (2.9) BS01 rna ? GO:0000463 ... A0A3B6DM38 38267667
    828729 8ip8:CB (2.9) BS02 rna ? GO:0000463 ... A0A3B6DM38 38267667
    828730 8ip8:DA (2.9) BS01 rna ? GO:0002181 ... W5ECL2 38267667
    828731 8ip8:DA (2.9) BS02 rna ? GO:0002181 ... W5ECL2 38267667
    828732 8ip8:DA (2.9) BS03 MG ? GO:0002181 ... W5ECL2 38267667
    828733 8ip8:DB (2.9) BS01 rna ? GO:0003723 ... Q7X748 38267667
    828734 8ip8:DB (2.9) BS02 MG ? GO:0003723 ... Q7X748 38267667
    828735 8ip8:EA (2.9) BS01 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828736 8ip8:EA (2.9) BS02 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828737 8ip8:EA (2.9) BS03 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828738 8ip8:EB (2.9) BS01 rna ? GO:0003723 ... A0A3B5ZXX7 38267667
    828739 8ip8:EB (2.9) BS02 rna ? GO:0003723 ... A0A3B5ZXX7 38267667
    828740 8ip8:FA (2.9) BS01 rna ? GO:0003735 ... A0A3B6TBF6 38267667
    828741 8ip8:FB (2.9) BS01 rna ? GO:0003729 ... Q5I7L1 38267667
    828742 8ip8:GA (2.9) BS01 rna ? GO:0003735 ... Q5I7K4 38267667
    828743 8ip8:GB (2.9) BS01 rna ? GO:0003735 ... D8L9P6 38267667
    828744 8ip8:GB (2.9) BS02 ZN ? GO:0003735 ... D8L9P6 38267667
    828745 8ip8:HA (2.9) BS01 rna ? GO:0002181 ... W5FEX7 38267667
    828746 8ip8:HA (2.9) BS02 rna ? GO:0002181 ... W5FEX7 38267667
    828747 8ip8:HB (2.9) BS01 rna ? GO:0003735 ... A0A3B6HUM3 38267667
    828748 8ip8:HB (2.9) BS02 rna ? GO:0003735 ... A0A3B6HUM3 38267667
    828749 8ip8:IA (2.9) BS01 rna ? GO:0003735 ... A0A3B6DCS5 38267667
    828750 8ip8:JA (2.9) BS01 rna ? GO:0003723 ... A0A3B6ATQ1 38267667
    828751 8ip8:JB (2.9) BS01 rna ? GO:0003729 ... A0A1D5XNC2 38267667
    828752 8ip8:KA (2.9) BS01 rna ? GO:0000027 ... A0A3B6DD91 38267667
    828753 8ip8:KA (2.9) BS02 rna ? GO:0000027 ... A0A3B6DD91 38267667
    828754 8ip8:KB (2.9) BS01 rna ? GO:0003723 ... A0A3B6NJZ9 38267667
    828755 8ip8:KB (2.9) BS02 rna ? GO:0003723 ... A0A3B6NJZ9 38267667
    828756 8ip8:LA (2.9) BS01 rna ? GO:0003723 ... A0A3B6DA12 38267667
    828757 8ip8:LA (2.9) BS02 rna ? GO:0003723 ... A0A3B6DA12 38267667
    828758 8ip8:LB (2.9) BS01 rna ? GO:0003735 ... A0A3B6QGW3 38267667
    828759 8ip8:MA (2.9) BS01 rna ? GO:0002181 ... W5FSM8 38267667
    828760 8ip8:MA (2.9) BS02 rna ? GO:0002181 ... W5FSM8 38267667
    828761 8ip8:MB (2.9) BS01 rna ? GO:0002181 ... A0A0C4BK99 38267667
    828762 8ip8:NA (2.9) BS01 rna ? GO:0003735 ... A0A1D5UQZ5 38267667
    828763 8ip8:NA (2.9) BS02 rna ? GO:0003735 ... A0A1D5UQZ5 38267667
    828764 8ip8:NB (2.9) BS01 rna ? GO:0003735 ... A0A1D5W6Q2 38267667
    828765 8ip8:OA (2.9) BS01 rna ? GO:0002181 ... W5CDW4 38267667
    828766 8ip8:OB (2.9) BS01 rna ? GO:0002181 ... A0A1D5RRD3 38267667
    828767 8ip8:PA (2.9) BS01 rna ? GO:0002181 ... A0A3B6GQI2 38267667
    828768 8ip8:PA (2.9) BS02 rna ? GO:0002181 ... A0A3B6GQI2 38267667
    828769 8ip8:PB (2.9) BS01 rna ? GO:0003735 ... A0A3B6RFY8 38267667
    828770 8ip8:PB (2.9) BS02 MG ? GO:0003735 ... A0A3B6RFY8 38267667
    828771 8ip8:QA (2.9) BS01 rna ? GO:0003735 ... A0A3B5Y651 38267667
    828772 8ip8:RA (2.9) BS01 rna ? GO:0003723 ... Q5I7K9 38267667
    828773 8ip8:SA (2.9) BS01 rna ? GO:0002181 ... W5G990 38267667
    828774 8ip8:TA (2.9) BS01 rna ? GO:0003735 ... A0A3B6SDD9 38267667
    828775 8ip8:UA (2.9) BS01 rna ? GO:0003723 ... A0A1D6BC85 38267667
    828776 8ip8:UA (2.9) BS02 rna ? GO:0003723 ... A0A1D6BC85 38267667
    828777 8ip8:VA (2.9) BS01 rna ? GO:0003735 ... M7ZU91 38267667
    828778 8ip8:VA (2.9) BS02 rna ? GO:0003735 ... M7ZU91 38267667
    828779 8ip8:WA (2.9) BS01 rna ? GO:0003735 ... A0A3B6C6X2 38267667
    828780 8ip8:WA (2.9) BS02 rna ? GO:0003735 ... A0A3B6C6X2 38267667
    828781 8ip8:WA (2.9) BS03 ZN ? GO:0003735 ... A0A3B6C6X2 38267667
    828782 8ip8:XA (2.9) BS01 rna ? GO:0003723 ... A0A3B6DGT8 38267667
    828783 8ip8:YA (2.9) BS01 rna ? GO:0002181 ... W5D7B8 38267667
    828784 8ip8:YA (2.9) BS02 rna ? GO:0002181 ... W5D7B8 38267667
    828785 8ip8:ZA (2.9) BS01 rna ? GO:0002181 ... A0A3B6C0D4 38267667
    828786 8ip8:ba (2.9) BS01 rna ? GO:0003735 ... A0A3B6PK86 38267667
    828787 8ip8:bb (2.9) BS01 rna ? GO:0003735 ... A0A3B6IU74 38267667
    828788 8ip8:bl (2.9) BS01 rna ? GO:0002184 ... I3NM28 38267667
    828789 8ip8:bl (2.9) BS02 rna ? GO:0002184 ... I3NM28 38267667
    828790 8ip8:bl (2.9) BS03 rna ? GO:0002184 ... I3NM28 38267667
    828791 8ip8:bl (2.9) BS04 rna ? GO:0002184 ... I3NM28 38267667
    828792 8ip8:ca (2.9) BS01 rna ? GO:0000462 ... A0A3B6AYT7 38267667
    828793 8ip8:ca (2.9) BS02 rna ? GO:0000462 ... A0A3B6AYT7 38267667
    828794 8ip8:cb (2.9) BS01 rna ? GO:0000447 ... W5EL62 38267667
    828795 8ip8:da (2.9) BS01 rna ? GO:0003723 ... W5AUH7 38267667
    828796 8ip8:db (2.9) BS01 rna ? GO:0003729 ... A0A3B6LWE1 38267667
    828797 8ip8:db (2.9) BS02 ZN ? GO:0003729 ... A0A3B6LWE1 38267667
    828798 8ip8:eb (2.9) BS01 rna ? GO:0003723 ... W5FPA7 38267667
    828799 8ip8:fb (2.9) BS01 rna ? GO:0003723 ... A0A3B6LVN2 38267667
    828800 8ip8:ga (2.9) BS01 rna ? GO:0003735 ... W5FV77 38267667

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).